-
1
-
-
74149094591
-
Synthetic therapeutic peptides: Science and market
-
Vlieghe, P., Lisowski, V., Martinez, J. et al. (2010) Synthetic therapeutic peptides: science and market. Drug Discov. Today, 15, 40-56.
-
(2010)
Drug Discov. Today
, vol.15
, pp. 40-56
-
-
Vlieghe, P.1
Lisowski, V.2
Martinez, J.3
-
2
-
-
77949472320
-
The synergistic use of computation, chemistry and biology to discover novel peptide-based drugs: The time is right
-
Audie, J. and Boyd, C. (2010) The synergistic use of computation, chemistry and biology to discover novel peptide-based drugs: The time is right. Curr. Pharm. Des., 16, 567-582.
-
(2010)
Curr. Pharm. des
, vol.16
, pp. 567-582
-
-
Audie, J.1
Boyd, C.2
-
3
-
-
33744964247
-
Design of a long acting peptide functioning as both a glucagon-like peptide-1 receptor agonist and a glucagon receptor antagonist
-
Pan, C.Q., Buxton, J.M., Yung, S.L. et al. (2006) Design of a long acting peptide functioning as both a glucagon-like peptide-1 receptor agonist and a glucagon receptor antagonist. J. Biol. Chem., 281, 12506-12515.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 12506-12515
-
-
Pan, C.Q.1
Buxton, J.M.2
Yung, S.L.3
-
4
-
-
84861834043
-
A stapled BIM peptide overcomes apoptotic resistance in hematologic cancers
-
LaBelle, J.L., Katz, S.G., Bird, G.H. et al. (2012) A stapled BIM peptide overcomes apoptotic resistance in hematologic cancers. J. Clin. Invest., 122, 2018-2031.
-
(2012)
J. Clin. Invest.
, vol.122
, pp. 2018-2031
-
-
LaBelle, J.L.1
Katz, S.G.2
Bird, G.H.3
-
5
-
-
4644258417
-
Antinociceptive structure-Activity studies with enkephalin-based opioid glycopeptides
-
Elmagbari, N.O., Egleton, R.D., Palian, M.M. et al. (2004) Antinociceptive structure-Activity studies with enkephalin-based opioid glycopeptides. J. Pharmacol. Exp. Ther., 311, 290-297.
-
(2004)
J. Pharmacol. Exp. Ther.
, vol.311
, pp. 290-297
-
-
Elmagbari, N.O.1
Egleton, R.D.2
Palian, M.M.3
-
6
-
-
84859439673
-
Peptides for cell-selective drug delivery
-
Svensen, N., Walton, J.G.A. and Bradley, M. (2012) Peptides for cell-selective drug delivery. Trends Pharmacol. Sci., 33, 186-192.
-
(2012)
Trends Pharmacol. Sci.
, vol.33
, pp. 186-192
-
-
Svensen, N.1
Walton, J.G.A.2
Bradley, M.3
-
7
-
-
33845699790
-
Antimicrobial and hostdefense peptides as new anti-infective therapeutic strategies
-
Hancock, R.E.W. and Sahl, H.-G. (2006) Antimicrobial and hostdefense peptides as new anti-infective therapeutic strategies. Nat. Biotechnol., 24, 1551-1557.
-
(2006)
Nat. Biotechnol.
, vol.24
, pp. 1551-1557
-
-
Hancock, R.E.W.1
Sahl, H.-G.2
-
8
-
-
79954527152
-
A strategy for antagonizing quorum sensing
-
Chen, G., Swem, L.R., Swem, D.L. et al. (2011) A strategy for antagonizing quorum sensing. Mol. Cell, 42, 199-209.
-
(2011)
Mol. Cell
, vol.42
, pp. 199-209
-
-
Chen, G.1
Swem, L.R.2
Swem, D.L.3
-
9
-
-
78751585262
-
Venomics: A new paradigm for natural products-based drug discovery
-
Vetter, I., Davis, J.L., Rash, L.D. et al. (2011) Venomics: A new paradigm for natural products-based drug discovery. Amino Acids, 40, 15-28.
-
(2011)
Amino Acids
, vol.40
, pp. 15-28
-
-
Vetter, I.1
Davis, J.L.2
Rash, L.D.3
-
10
-
-
84876536009
-
Xentry, a new class of cell-penetrating peptide uniquely equipped for delivery of drugs
-
Montrose, K., Yang, Y., Sun, X. et al. (2013) Xentry, a new class of cell-penetrating peptide uniquely equipped for delivery of drugs. Sci Rep., 3, 1661.
-
(2013)
Sci Rep.
, vol.3
, pp. 1661
-
-
Montrose, K.1
Yang, Y.2
Sun, X.3
-
11
-
-
13844303056
-
Is phage display technology on target for developing peptide-based cancer drugs?
-
Landon, L.A., Zou, J. and Deutscher, S.L. (2004) Is phage display technology on target for developing peptide-based cancer drugs? Curr. Drug Discov. Technol., 1, 113-132.
-
(2004)
Curr. Drug Discov. Technol.
, vol.1
, pp. 113-132
-
-
Landon, L.A.1
Zou, J.2
Deutscher, S.L.3
-
12
-
-
66449102696
-
Phage display screening against a set of targets to establish peptide-based sugar mimetics and molecular docking to predict binding site
-
Yu, L., Yu, P.S., Mui, E.Y.Y. et al. (2009) Phage display screening against a set of targets to establish peptide-based sugar mimetics and molecular docking to predict binding site. Bioorg. Med. Chem., 17, 4825-4832.
-
(2009)
Bioorg. Med. Chem.
, vol.17
, pp. 4825-4832
-
-
Yu, L.1
Yu, P.S.2
Mui, E.Y.Y.3
-
13
-
-
0030904387
-
Application of combinatorial library methods in cancer research and drug discovery
-
Lam, K.S. (1997) Application of combinatorial library methods in cancer research and drug discovery. Anticancer Drug Des., 12, 145-167.
-
(1997)
Anticancer Drug Des.
, vol.12
, pp. 145-167
-
-
Lam, K.S.1
-
14
-
-
60849100790
-
Screening of one-bead-one-peptide combinatorial library using red fluorescent dyes. Presence of positive and false positive beads
-
Marani, M.M., Ceron, M.C.M., Giudicessi, S.L. et al. (2009) Screening of one-bead-one-peptide combinatorial library using red fluorescent dyes. Presence of positive and false positive beads. J. Comb. Chem., 11, 146-150.
-
(2009)
J. Comb. Chem.
, vol.11
, pp. 146-150
-
-
Marani, M.M.1
Ceron, M.C.M.2
Giudicessi, S.L.3
-
15
-
-
52649116114
-
Compstatin: A complement inhibitor on its way to clinical application
-
Ricklin, D. and Lambris, J.D. (2008) Compstatin: A complement inhibitor on its way to clinical application. Adv. Exp. Med. Biol., 632, 273-292.
-
(2008)
Adv. Exp. Med. Biol.
, vol.632
, pp. 273-292
-
-
Ricklin, D.1
Lambris, J.D.2
-
16
-
-
0033452452
-
Proprotein and prohormone convertases: A family of subtilases generating diverse bioactive polypeptides
-
Seidah, N.G. and Chrétien, M. (1999) Proprotein and prohormone convertases: A family of subtilases generating diverse bioactive polypeptides. Brain Res., 848, 45-62.
-
(1999)
Brain Res.
, vol.848
, pp. 45-62
-
-
Seidah, N.G.1
Chrétien, M.2
-
17
-
-
36448983583
-
A genome-wide survey of short coding sequences in streptococci
-
Ibrahim, M., Nicolas, P., Bessières, P. et al. (2007) A genome-wide survey of short coding sequences in streptococci. Microbiology, 153, 3631-3644.
-
(2007)
Microbiology
, vol.153
, pp. 3631-3644
-
-
Ibrahim, M.1
Nicolas, P.2
Bessières, P.3
-
18
-
-
77949482581
-
Missing genes in the annotation of prokaryotic genomes
-
Warren, A.S., Archuleta, J., Feng, W.-C. et al. (2010) Missing genes in the annotation of prokaryotic genomes. BMC Bioinformatics, 11, 131.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 131
-
-
Warren, A.S.1
Archuleta, J.2
Feng, W.-C.3
-
19
-
-
33846057724
-
NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
-
Pruitt, K.D., Tatusova, T. and Maglott, D.R. (2007) NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res., 35, D61-D65.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. D61-D65
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
20
-
-
0346850954
-
The lactobin a and amylovorin L471 encoding genes are identical, and their distribution seems to be restricted to the species Lactobacillus amylovorus that is of interest for cereal fermentations
-
Vuyst, L.D., Avonts, L., Neysens, P. et al. (2004) The lactobin a and amylovorin L471 encoding genes are identical, and their distribution seems to be restricted to the species Lactobacillus amylovorus that is of interest for cereal fermentations. Int. J. Food Microbiol., 90, 93-106.
-
(2004)
Int. J. Food Microbiol.
, vol.90
, pp. 93-106
-
-
Vuyst, L.D.1
Avonts, L.2
Neysens, P.3
-
21
-
-
34249858459
-
Amper: A database and an automated discovery tool for antimicrobial peptides
-
Fjell, C.D., Hancock, R.E.W. and Cherkasov, A. (2007) Amper: A database and an automated discovery tool for antimicrobial peptides. Bioinformatics, 23, 1148-1155.
-
(2007)
Bioinformatics
, vol.23
, pp. 1148-1155
-
-
Fjell, C.D.1
Hancock, R.E.W.2
Cherkasov, A.3
-
22
-
-
58149187882
-
APD2: The updated antimicrobial peptide database and its application in peptide design
-
Wang, G., Li, X. and Wang, Z. (2009) APD2: The updated antimicrobial peptide database and its application in peptide design. Nucleic Acids Res., 37, D933-D937.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D933-D937
-
-
Wang, G.1
Li, X.2
Wang, Z.3
-
23
-
-
38349095584
-
Bactibase: A new web-Accessible database for bacteriocin characterization
-
Hammami, R., Zouhir, A., Hamida, J.B. et al. (2007) Bactibase: A new web-Accessible database for bacteriocin characterization. BMC Microbiol., 7, 89.
-
(2007)
BMC Microbiol.
, vol.7
, pp. 89
-
-
Hammami, R.1
Zouhir, A.2
Hamida, J.B.3
-
24
-
-
77954305252
-
BAGEL2: Mining for bacteriocins in genomic data
-
deJong, A., vanHeel, A.J., Kok, J. et al. (2010) BAGEL2: mining for bacteriocins in genomic data. Nucleic Acids Res., 38, W647-W651.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. W647-W651
-
-
DeJong, A.1
Van Heel, A.J.2
Kok, J.3
-
25
-
-
75549090102
-
CAMP: A useful resource for research on antimicrobial peptides
-
Thomas, S., Karnik, S., Barai, R.S. et al. (2010) CAMP: A useful resource for research on antimicrobial peptides. Nucleic Acids Res., 38, D774-D780.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. D774-D780
-
-
Thomas, S.1
Karnik, S.2
Barai, R.S.3
-
26
-
-
84862201368
-
DAMPD: A manually curated antimicrobial peptide database
-
Sundararajan, V.S., Gabere, M.N., Pretorius, A. et al. (2012) DAMPD: A manually curated antimicrobial peptide database. Nucleic Acids Res., 40, D1108-D1112.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. D1108-D1112
-
-
Sundararajan, V.S.1
Gabere, M.N.2
Pretorius, A.3
-
27
-
-
84858277472
-
YADAMP: Yet another database of antimicrobial peptides
-
Piotto, S.P., Sessa, L., Concilio, S. et al. (2012) YADAMP: yet another database of antimicrobial peptides. Int. J. Antimicrob. Agents, 39, 346-351.
-
(2012)
Int. J. Antimicrob. Agents
, vol.39
, pp. 346-351
-
-
Piotto, S.P.1
Sessa, L.2
Concilio, S.3
-
28
-
-
78651330433
-
Effective-A database of predicted secreted bacterial proteins
-
Jehl, M.-A., Arnold, R. and Rattei, T. (2011) Effective-A database of predicted secreted bacterial proteins. Nucleic Acids Res., 39, D591-D595.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. D591-D595
-
-
Jehl, M.-A.1
Arnold, R.2
Rattei, T.3
-
29
-
-
84876546173
-
Quorumpeps database: Chemical space, microbial origin and functionality of quorum sensing peptides
-
Wynendaele, E., Bronselaer, A., Nielandt, J. et al. (2013) Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides. Nucleic Acids Res., 41, D655-D659.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D655-D659
-
-
Wynendaele, E.1
Bronselaer, A.2
Nielandt, J.3
-
30
-
-
27644479960
-
SPdb-A signal peptide database
-
Choo, K.H., Tan, T.W. and Ranganathan, S. (2005) SPdb-A signal peptide database. BMC Bioinformatics, 6, 249.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 249
-
-
Choo, K.H.1
Tan, T.W.2
Ranganathan, S.3
-
31
-
-
84861162217
-
DADP: The database of anuran defense peptides
-
Novković, M., Simunić, J., Bojović, V. et al. (2012) DADP: The database of anuran defense peptides. Bioinformatics, 28, 1406-1407.
-
(2012)
Bioinformatics
, vol.28
, pp. 1406-1407
-
-
Novković, M.1
Simunić, J.2
Bojović, V.3
-
32
-
-
0345169940
-
The peptaibol database: A sequence and structure resource
-
Whitmore, L., Chugh, J.K., Snook, C.F. et al. (2003) The peptaibol database: A sequence and structure resource. J. Pept. Sci., 9, 663-665.
-
(2003)
J. Pept. Sci.
, vol.9
, pp. 663-665
-
-
Whitmore, L.1
Chugh, J.K.2
Snook, C.F.3
-
33
-
-
84862260149
-
CPPsite: A curated database of cell penetrating peptides
-
2012
-
Gautam, A., Singh, H., Tyagi, A. et al. (2012) CPPsite: A curated database of cell penetrating peptides. Database, 2012: Article ID bas015; doi:10.1093/database/bas015.
-
(2012)
Database
-
-
Gautam, A.1
Singh, H.2
Tyagi, A.3
-
34
-
-
38549094609
-
NORINE: A database of nonribosomal peptides
-
Caboche, S., Pupin, M., Leclère, V. et al. (2008) NORINE: A database of nonribosomal peptides. Nucleic Acids Res., 36, D326-D331.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. D326-D331
-
-
Caboche, S.1
Pupin, M.2
Leclère, V.3
-
35
-
-
34548658287
-
Pepbank-A database of peptides based on sequence text mining and public peptide data sources
-
Shtatland, T., Guettler, D., Kossodo, M. et al. (2007) Pepbank-A database of peptides based on sequence text mining and public peptide data sources. BMC Bioinformatics, 8, 280.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 280
-
-
Shtatland, T.1
Guettler, D.2
Kossodo, M.3
-
36
-
-
33644874828
-
The EROP-moscow oligopeptide database
-
Zamyatnin, A.A., Borchikov, A.S., Vladimirov, M.G. et al. (2006) The EROP-Moscow oligopeptide database. Nucleic Acids Res., 34, D261-D266.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. D261-D266
-
-
Zamyatnin, A.A.1
Borchikov, A.S.2
Vladimirov, M.G.3
-
37
-
-
75549088586
-
PepX: A structural database of non-redundant protein-peptide complexes
-
Vanhee, P., Reumers, J., Stricher, F. et al. (2010) PepX: A structural database of non-redundant protein-peptide complexes. Nucleic Acids Res., 38, D545-D551.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. D545-D551
-
-
Vanhee, P.1
Reumers, J.2
Stricher, F.3
-
38
-
-
75849126506
-
The structural basis of peptide-protein binding strategies
-
London, N., Movshovitz-Attias, D. and Schueler-Furman, O. (2010) The structural basis of peptide-protein binding strategies. Structure, 18, 188-199.
-
(2010)
Structure
, vol.18
, pp. 188-199
-
-
London, N.1
Movshovitz-Attias, D.2
Schueler-Furman, O.3
-
39
-
-
0037085737
-
Mining bacillus subtilis chromosome heterogeneities using hidden Markov models
-
Nicolas, P., Bize, L., Muri, F. et al. (2002) Mining Bacillus subtilis chromosome heterogeneities using hidden Markov models. Nucleic Acids Res., 30, 1418-1426.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1418-1426
-
-
Nicolas, P.1
Bize, L.2
Muri, F.3
-
40
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller, W. et al. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
-
41
-
-
66149095114
-
Analysis of ten brucella genomes reveals evidence for horizontal gene transfer despite a preferred intracellular lifestyle
-
Wattam, A.R., Williams, K.P., Snyder, E.E. et al. (2009) Analysis of ten Brucella genomes reveals evidence for horizontal gene transfer despite a preferred intracellular lifestyle. J. Bacteriol., 191, 3569-3579.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 3569-3579
-
-
Wattam, A.R.1
Williams, K.P.2
Snyder, E.E.3
-
42
-
-
23944437942
-
Opinion: Re-evaluating prokaryotic species
-
Gevers, D., Cohan, F.M., Lawrence, J.G. et al. (2005) Opinion: re-evaluating prokaryotic species. Nat. Rev. Microbiol., 3, 733-739.
-
(2005)
Nat. Rev. Microbiol.
, vol.3
, pp. 733-739
-
-
Gevers, D.1
Cohan, F.M.2
Lawrence, J.G.3
-
43
-
-
38549155995
-
Genomics, environmental genomics and the issue of microbial species
-
Edinb
-
Ward, D.M., Cohan, F.M., Bhaya, D. et al. (2008) Genomics, environmental genomics and the issue of microbial species. Heredity (Edinb), 100, 207-219.
-
(2008)
Heredity
, vol.100
, pp. 207-219
-
-
Ward, D.M.1
Cohan, F.M.2
Bhaya, D.3
-
44
-
-
24944587193
-
Towards a genome-based taxonomy for prokaryotes
-
Konstantinidis, K.T. and Tiedje, J.M. (2005) Towards a genome-based taxonomy for prokaryotes. J. Bacteriol., 187, 6258-6264.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6258-6264
-
-
Konstantinidis, K.T.1
Tiedje, J.M.2
-
45
-
-
14044262978
-
Genomic insights that advance the species definition for prokaryotes
-
Konstantinidis, K.T. and Tiedje, J.M. (2005) Genomic insights that advance the species definition for prokaryotes. Proc. Natl. Acad. Sci. U. S. A., 102, 2567-2572.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A
, vol.102
, pp. 2567-2572
-
-
Konstantinidis, K.T.1
Tiedje, J.M.2
-
46
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
Jones, D.T. (1999) Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol., 292, 195-202.
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 195-202
-
-
Jones, D.T.1
-
47
-
-
2442592993
-
A hidden markov model derived structural alphabet for proteins
-
Camproux, A.C., Gautier, R. and Tufféry, P. (2004) A Hidden Markov Model derived structural alphabet for proteins. J. Mol. Biol., 339, 591-605.
-
(2004)
J. Mol. Biol.
, vol.339
, pp. 591-605
-
-
Camproux, A.C.1
Gautier, R.2
Tufféry, P.3
-
48
-
-
0033954256
-
The protein data bank
-
Berman, H.M., Westbrook, J., Feng, Z. et al. (2000) The protein data bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
-
49
-
-
31944444347
-
Large-scale prediction of disulphide bridges using kernel methods, two-dimensional recursive neural networks, and weighted graph matching
-
Cheng, J., Saigo, H. and Baldi, P. (2006) Large-scale prediction of disulphide bridges using kernel methods, two-dimensional recursive neural networks, and weighted graph matching. Proteins, 62, 617-629.
-
(2006)
Proteins
, vol.62
, pp. 617-629
-
-
Cheng, J.1
Saigo, H.2
Baldi, P.3
-
50
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden markov model: Application to complete genomes
-
Krogh, A., Larsson, B., vonHeijne, G. et al. (2001) Predicting transmembrane protein topology with a Hidden Markov Model: Application to complete genomes. J. Mol. Biol., 305, 567-580.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
VonHeijne, G.3
-
51
-
-
80053345905
-
SignalP 4.0: Discriminating signal peptides from transmembrane regions
-
Petersen, T.N., Brunak, S., vonHeijne, G. et al. (2011) SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat. Methods, 8, 785-786.
-
(2011)
Nat. Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
Von Heijne, G.3
-
52
-
-
84867323770
-
Towards the improved discovery and design of functional peptides: Common features of diverse classes permit generalized prediction of bioactivity
-
Mooney, C., Haslam, N.J., Pollastri, G. et al. (2012) Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivity. PLoS One, 7, e45012.
-
(2012)
PLoS One
, vol.7
, pp. e45012
-
-
Mooney, C.1
Haslam, N.J.2
Pollastri, G.3
-
53
-
-
75149184631
-
AntiBP2: Improved version of antibacterial peptide prediction
-
Lata, S., Mishra, N.K. and Raghava, G.P.S. (2010) AntiBP2: improved version of antibacterial peptide prediction. BMC Bioinformatics, 11, S19.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. S19
-
-
Lata, S.1
Mishra, N.K.2
Raghava, G.P.S.3
-
54
-
-
80054078476
-
Fast, scalable generation of high-quality protein multiple sequence alignments using clustal omega
-
Sievers, F., Wilm, A., Dineen, D. et al. (2011) Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol. Syst. Biol., 7, 539.
-
(2011)
Mol. Syst. Biol.
, vol.7
, pp. 539
-
-
Sievers, F.1
Wilm, A.2
Dineen, D.3
-
55
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks, G.E., Hon, G., Chandonia, J.-M. et al. (2004) WebLogo: A sequence logo generator. Genome Res., 14, 1188-1190.
-
(2004)
Genome Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.-M.3
-
56
-
-
84869770569
-
Transcriptomic profiling of the oyster pathogen Vibrio splendidus opens a window on the evolutionary dynamics of the small RNA repertoire in the Vibrio genus
-
Toffano-Nioche, C., Nguyen, A.N., Kuchly, C. et al. (2012) Transcriptomic profiling of the oyster pathogen Vibrio splendidus opens a window on the evolutionary dynamics of the small RNA repertoire in the Vibrio genus. RNA, 18, 2201-2219.
-
(2012)
RNA
, vol.18
, pp. 2201-2219
-
-
Toffano-Nioche, C.1
Nguyen, A.N.2
Kuchly, C.3
-
57
-
-
84865728811
-
Antisense transcription is pervasive but rarely conserved in enteric bacteria
-
Raghavan, R., Sloan, D.B. and Ochman, H. (2012) Antisense transcription is pervasive but rarely conserved in enteric bacteria. MBio, 3, e000156-12.
-
(2012)
MBio
, vol.3
, pp. e000156-e212
-
-
Raghavan, R.1
Sloan, D.B.2
Ochman, H.3
-
58
-
-
84883521019
-
Detection of non-coding RNA in bacteria and archaea using the DETR'PROK galaxy pipeline
-
Toffano-Nioche, C., Luo, Y., Kuchly, C. et al. (2013) Detection of non-coding RNA in bacteria and archaea using the DETR'PROK Galaxy pipeline. Methods, 63, 60-65.
-
(2013)
Methods
, vol.63
, pp. 60-65
-
-
Toffano-Nioche, C.1
Luo, Y.2
Kuchly, C.3
-
59
-
-
0031859613
-
Molecular analysis of the locus responsible for production of plantaricin S, a two-peptide bacteriocin produced by Lactobacillus plantarum LPCO10
-
Stephens, S.K., Floriano, B., Cathcart, D.P. et al. (1998) Molecular analysis of the locus responsible for production of plantaricin S, a two-peptide bacteriocin produced by Lactobacillus plantarum LPCO10. Appl. Environ. Microbiol., 64, 1871-1877.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1871-1877
-
-
Stephens, S.K.1
Floriano, B.2
Cathcart, D.P.3
-
60
-
-
10744225001
-
Induction of plantaricin production in Lactobacillus plantarum NC8 after coculture with specific gram-positive bacteria is mediated by an autoinduction mechanism
-
Maldonado, A., Jiménez-Díaz, R. and Ruiz-Barba, J.L. (2004) Induction of plantaricin production in Lactobacillus plantarum NC8 after coculture with specific gram-positive bacteria is mediated by an autoinduction mechanism. J. Bacteriol., 186, 1556-1564.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 1556-1564
-
-
Maldonado, A.1
Jiménez-Díaz, R.2
Ruiz-Barba, J.L.3
-
61
-
-
0032484693
-
Sequence analysis of mutA and mutM genes involved in the biosynthesis of the lantibiotic mutacin II in Streptococcus mutans
-
Woodruff, W.A., Novak, J. and Caufield, P.W. (1998) Sequence analysis of mutA and mutM genes involved in the biosynthesis of the lantibiotic mutacin II in Streptococcus mutans. Gene, 206, 37-43.
-
(1998)
Gene
, vol.206
, pp. 37-43
-
-
Woodruff, W.A.1
Novak, J.2
Caufield, P.W.3
-
62
-
-
0027279657
-
Isolation and characterization of the lantibiotic salivaricin a and its structural gene sala from Streptococcus salivarius 20P3
-
Ross, K.F., Ronson, C.W. and Tagg, J.R. (1993) Isolation and characterization of the lantibiotic salivaricin a and its structural gene sala from Streptococcus salivarius 20P3. Appl. Environ. Microbiol., 59, 2014-2021.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2014-2021
-
-
Ross, K.F.1
Ronson, C.W.2
Tagg, J.R.3
-
63
-
-
84891822189
-
Ensembl genomes 2013: Scaling up access to genome-wide data
-
Kersey, P.J., Allen, J.E., Christensen, M. et al. (2013) Ensembl genomes 2013: scaling up access to genome-wide data. Nucleic Acids Res., 42, D546-D552.
-
(2013)
Nucleic Acids Res.
, vol.42
, pp. D546-D552
-
-
Kersey, P.J.1
Allen, J.E.2
Christensen, M.3
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