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Volumn 39, Issue SUPPL. 1, 2011, Pages

Effective-A database of predicted secreted bacterial proteins

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; SIGNAL PEPTIDE;

EID: 78651330433     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq1154     Document Type: Article
Times cited : (89)

References (22)
  • 1
    • 60849116153 scopus 로고    scopus 로고
    • Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology
    • Tseng, T.T., Tyler, B.M. and Setubal, J.C. (2009) Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology. BMC Microbiol., 9(Suppl. 1), S2.
    • (2009) BMC Microbiol. , vol.9 , Issue.SUPPL. 1
    • Tseng, T.T.1    Tyler, B.M.2    Setubal, J.C.3
  • 2
    • 77951629009 scopus 로고    scopus 로고
    • The 'when and whereabouts' of injected pathogen effectors
    • Rodrigues, C.D. and Enninga, J. (2010) The 'when and whereabouts' of injected pathogen effectors. Nat. Methods, 7, 267-269.
    • (2010) Nat. Methods , vol.7 , pp. 267-269
    • Rodrigues, C.D.1    Enninga, J.2
  • 3
    • 75749096311 scopus 로고    scopus 로고
    • Bacterial manipulation of innate immunity to promote infection
    • Diacovich, L. and Gorvel, J.P. (2010) Bacterial manipulation of innate immunity to promote infection. Nat. Rev., 8, 117-128.
    • (2010) Nat. Rev. , vol.8 , pp. 117-128
    • Diacovich, L.1    Gorvel, J.P.2
  • 4
    • 75949092121 scopus 로고    scopus 로고
    • Anti-virulence strategies to combat bacteria-mediated disease
    • Rasko, D.A. and Sperandio, V. (2010) Anti-virulence strategies to combat bacteria-mediated disease. Nat. Rev. Drug Discov., 9, 117-128.
    • (2010) Nat. Rev. Drug Discov. , vol.9 , pp. 117-128
    • Rasko, D.A.1    Sperandio, V.2
  • 5
    • 77950859427 scopus 로고    scopus 로고
    • Bacterial secretion systems with an emphasis on the chlamydial Type III secretion system
    • Beeckman, D.S. and Vanrompay, D.C. (2010) Bacterial secretion systems with an emphasis on the chlamydial Type III secretion system. Curr. Issues Mol. Biol., 12, 17-41.
    • (2010) Curr. Issues Mol. Biol. , vol.12 , pp. 17-41
    • Beeckman, D.S.1    Vanrompay, D.C.2
  • 6
    • 58149284564 scopus 로고    scopus 로고
    • A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000
    • Almeida, N.F., Yan, S., Lindeberg, M., Studholme, D.J., Schneider, D.J., Condon, B., Liu, H., Viana, C.J., Warren, A., Evans, C. et al. (2009) A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000. Mol. Plant Microbe Interact., 22, 52-62.
    • (2009) Mol. Plant Microbe Interact. , vol.22 , pp. 52-62
    • Almeida, N.F.1    Yan, S.2    Lindeberg, M.3    Studholme, D.J.4    Schneider, D.J.5    Condon, B.6    Liu, H.7    Viana, C.J.8    Warren, A.9    Evans, C.10
  • 7
    • 38549107537 scopus 로고    scopus 로고
    • VFDB 2008 release: An enhanced web-based resource for comparative pathogenomics
    • Yang, J., Chen, L., Sun, L., Yu, J. and Jin, Q. (2008) VFDB 2008 release: An enhanced web-based resource for comparative pathogenomics. Nucleic Acids Res., 36, D539-D542.
    • (2008) Nucleic Acids Res. , vol.36
    • Yang, J.1    Chen, L.2    Sun, L.3    Yu, J.4    Jin, Q.5
  • 11
    • 67650151451 scopus 로고    scopus 로고
    • Prediction of type III secretion signals in genomes of Gram-negative bacteria
    • Lower, M. and Schneider, G. (2009) Prediction of type III secretion signals in genomes of Gram-negative bacteria. PloS one, 4, e5917.
    • (2009) PloS one , vol.4
    • Lower, M.1    Schneider, G.2
  • 12
    • 66349123567 scopus 로고    scopus 로고
    • Accurate prediction of secreted substrates and identification of a conserved putative secretion signal for type III secretion systems
    • Samudrala, R., Heffron, F. and McDermott, J.E. (2009) Accurate prediction of secreted substrates and identification of a conserved putative secretion signal for type III secretion systems. PLoS Pathog., 5, e1000375.
    • (2009) PLoS Pathog. , vol.5
    • Samudrala, R.1    Heffron, F.2    McDermott, J.E.3
  • 13
    • 60049089360 scopus 로고    scopus 로고
    • Coxiella type IV secretion and cellular microbiology
    • Voth, D.E. and Heinzen, R.A. (2009) Coxiella type IV secretion and cellular microbiology. Curr. Opin. Microbiol., 12, 74-80.
    • (2009) Curr. Opin. Microbiol. , vol.12 , pp. 74-80
    • Voth, D.E.1    Heinzen, R.A.2
  • 15
    • 0033057517 scopus 로고    scopus 로고
    • Eukaryotic signalling domain homologues in archaea and bacteria. Ancient ancestry and horizontal gene transfer
    • Ponting, C.P., Aravind, L., Schultz, J., Bork, P. and Koonin, E.V. (1999) Eukaryotic signalling domain homologues in archaea and bacteria. Ancient ancestry and horizontal gene transfer. J. Mol. Biol., 289, 729-745.
    • (1999) J. Mol. Biol. , vol.289 , pp. 729-745
    • Ponting, C.P.1    Aravind, L.2    Schultz, J.3    Bork, P.4    Koonin, E.V.5
  • 16
    • 46249111623 scopus 로고    scopus 로고
    • Ankyrin repeat proteins comprise a diverse family of bacterial type IV effectors
    • Pan, X., Luhrmann, A., Satoh, A., Laskowski-Arce, M.A. and Roy, C.R. (2008) Ankyrin repeat proteins comprise a diverse family of bacterial type IV effectors. Science, 320, 1651-1654.
    • (2008) Science , vol.320 , pp. 1651-1654
    • Pan, X.1    Luhrmann, A.2    Satoh, A.3    Laskowski-Arce, M.A.4    Roy, C.R.5
  • 17
    • 33846057724 scopus 로고    scopus 로고
    • NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt, K.D., Tatusova, T. and Maglott, D.R. (2007) NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res., 35, D61-D65.
    • (2007) Nucleic Acids Res. , vol.35
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 19
    • 75549086850 scopus 로고    scopus 로고
    • SIMAP-A comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
    • Rattei, T., Tischler, P., Gotz, S., Jehl, M.A., Hoser, J., Arnold, R., Conesa, A. and Mewes, H.W. (2010) SIMAP-a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters. Nucleic Acids Res., 38, D223-D226.
    • (2010) Nucleic Acids Res. , vol.38
    • Rattei, T.1    Tischler, P.2    Gotz, S.3    Jehl, M.A.4    Hoser, J.5    Arnold, R.6    Conesa, A.7    Mewes, H.W.8
  • 20
  • 22
    • 75549090213 scopus 로고    scopus 로고
    • KEGG for representation and analysis of molecular networks involving diseases and drugs
    • Kanehisa, M., Goto, S., Furumichi, M., Tanabe, M. and Hirakawa, M. (2010) KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res., 38, D355-D360.
    • (2010) Nucleic Acids Res. , vol.38
    • Kanehisa, M.1    Goto, S.2    Furumichi, M.3    Tanabe, M.4    Hirakawa, M.5


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