메뉴 건너뛰기




Volumn 6, Issue MAR, 2015, Pages

Chromatin changes in response to drought, salinity, heat, and cold stresses in plants

Author keywords

Abiotic stress response; DNA methylation; Epigenetic regulation; Histone modification; Stress memory

Indexed keywords


EID: 84925095925     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2015.00114     Document Type: Review
Times cited : (357)

References (134)
  • 1
    • 84872811218 scopus 로고    scopus 로고
    • Genome-wide analysis of histone modifiers in tomato: Gaining an insight into their developmental roles
    • Aiese-Cigliano, R., Sanseverino, W., Cremona, G., Ercolano, M. R., Conicella, C., and Consiglio, F. M. (2013). Genome-wide analysis of histone modifiers in tomato: gaining an insight into their developmental roles. BMC Genomics 14:57. doi: 10.1186/1471-2164-14-57
    • (2013) BMC Genomics , vol.14 , pp. 57
    • Aiese-Cigliano, R.1    Sanseverino, W.2    Cremona, G.3    Ercolano, M.R.4    Conicella, C.5    Consiglio, F.M.6
  • 3
    • 79955931649 scopus 로고    scopus 로고
    • Genome-wide analysis of the SET DOMAIN GROUP family in Grapevine
    • Aquea, F., Vega, A., Timmermann, T., Poupin, M. J., and Arce-Johnson, P. (2011). Genome-wide analysis of the SET DOMAIN GROUP family in Grapevine. Plant Cell Rep. 30, 1087-1097. doi: 10.1007/s00299-011-1015-0
    • (2011) Plant Cell Rep. , vol.30 , pp. 1087-1097
    • Aquea, F.1    Vega, A.2    Timmermann, T.3    Poupin, M.J.4    Arce-Johnson, P.5
  • 4
    • 65649099698 scopus 로고    scopus 로고
    • A tale of tails: How histone tails mediate chromatin compaction in different salt and linker histone environments
    • Arya, G., and Schlick, T. (2009). A tale of tails: how histone tails mediate chromatin compaction in different salt and linker histone environments. J. Phys. Chem. 113, 4045-4059. doi: 10.1021/jp810375d
    • (2009) J. Phys. Chem. , vol.113 , pp. 4045-4059
    • Arya, G.1    Schlick, T.2
  • 5
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylation in the human genome
    • Barski, A., Cuddapah, S., Cui, K., Roh, T. Y., Schones, D. E., Wang, Z., et al. (2007). High-resolution profiling of histone methylation in the human genome. Cell 129, 823-837. doi: 10.1016/j.cell.2007.05.009
    • (2007) Cell , vol.129 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.Y.4    Schones, D.E.5    Wang, Z.6
  • 6
    • 78649707322 scopus 로고    scopus 로고
    • A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1
    • Baxter, I., Brazelton, J. N., Yu, D., Huang, Y. S., Lahner, B., Yakubova, E., et al. (2010). A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1. PLoS Genet. 6:e1001193. doi: 10.1371/journal.pgen.1001193
    • (2010) PLoS Genet. , vol.6
    • Baxter, I.1    Brazelton, J.N.2    Yu, D.3    Huang, Y.S.4    Lahner, B.5    Yakubova, E.6
  • 7
    • 84856091218 scopus 로고    scopus 로고
    • The progeny of Arabidopsis thaliana plants exposed to salt exhibit changes in DNA methylation, histone modifications and gene expression
    • Bilichak, A., Ilnystkyy, Y., Hollunder, J., and Kovalchuk, I. (2012). The progeny of Arabidopsis thaliana plants exposed to salt exhibit changes in DNA methylation, histone modifications and gene expression. PLoS ONE7:e30515. doi: 10.1371/journal.pone.0030515
    • (2012) PLoS ONE , vol.7
    • Bilichak, A.1    Ilnystkyy, Y.2    Hollunder, J.3    Kovalchuk, I.4
  • 8
    • 84879207907 scopus 로고    scopus 로고
    • Thermal stress effects on grain yield inBrachypodium distachyon occur via H2A.Z-nucleosomes
    • Boden, S. A., Kavanová, M., Finnegan, E. J., and Wigge, P. A. (2013). Thermal stress effects on grain yield inBrachypodium distachyon occur via H2A.Z-nucleosomes. Genome Biol. 14, R65. doi: 10.1186/gb-2013-14-6-r65
    • (2013) Genome Biol. , vol.14
    • Boden, S.A.1    Kavanová, M.2    Finnegan, E.J.3    Wigge, P.A.4
  • 9
    • 80052611736 scopus 로고    scopus 로고
    • The low temperature response pathways for cold acclimation and vernalization are independent
    • Bond, D. M., Dennis, E. S., and Finnegan, E. J. (2011). The low temperature response pathways for cold acclimation and vernalization are independent. Plant Cell Environ. 34, 1737-1748. doi: 10.1111/j.1365-3040.2011.02370.x
    • (2011) Plant Cell Environ. , vol.34 , pp. 1737-1748
    • Bond, D.M.1    Dennis, E.S.2    Finnegan, E.J.3
  • 10
    • 77949864217 scopus 로고    scopus 로고
    • Transgenerational adaptation of Arabidopsis to stress requires DNA methylation and the function of Dicer-like proteins
    • Boyko, A., Blevins, T., Yao, Y., Golubov, A., Bilichak, A., Ilnytskyy, Y., et al. (2010). Transgenerational adaptation of Arabidopsis to stress requires DNA methylation and the function of Dicer-like proteins. PLoS ONE 5:e9514. doi: 10.1371/journal.pone.0009514
    • (2010) PLoS ONE , vol.5
    • Boyko, A.1    Blevins, T.2    Yao, Y.3    Golubov, A.4    Bilichak, A.5    Ilnytskyy, Y.6
  • 11
    • 0036830642 scopus 로고    scopus 로고
    • Role of histone H3 lysine 27 methylation in Polycomb-group silencing
    • Cao, R., Wang, L., Wang, H., Xia, L., Erdjument-Bromage, H., Tempst, P., et al. (2002). Role of histone H3 lysine 27 methylation in Polycomb-group silencing. Science 298, 1039-1043. doi: 10.1126/science.1076997
    • (2002) Science , vol.298 , pp. 1039-1043
    • Cao, R.1    Wang, L.2    Wang, H.3    Xia, L.4    Erdjument-Bromage, H.5    Tempst, P.6
  • 12
    • 0037046810 scopus 로고    scopus 로고
    • Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing
    • Cao, X., and Jacobsen, S. E. (2002). Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr. Biol. 12, 1138-1144. doi: 10.1016/S0960-9822(02)00925-9
    • (2002) Curr. Biol. , vol.12 , pp. 1138-1144
    • Cao, X.1    Jacobsen, S.E.2
  • 13
    • 27744471474 scopus 로고    scopus 로고
    • Stable incorporation of sequence specific repressors Ash1 and Ume6 into the Rpd3L complex
    • Carrozza, M. J., Florens, L., Swanson, S. K., Shia, W. J., Anderson, S., Yates, J., et al. (2005a). Stable incorporation of sequence specific repressors Ash1 and Ume6 into the Rpd3L complex. Biochim. Biophys. Acta 1731, 77-87. doi: 10.1016/j.bbaexp.2005.09.005
    • (2005) Biochim. Biophys. Acta , vol.1731 , pp. 77-87
    • Carrozza, M.J.1    Florens, L.2    Swanson, S.K.3    Shia, W.J.4    Anderson, S.5    Yates, J.6
  • 14
    • 27744577727 scopus 로고    scopus 로고
    • Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
    • Carrozza, M. J., Li, B., Florens, L., Suganuma, T., Swanson, S. K., Lee, K. K., et al. (2005b). Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell 123, 581-592. doi: 10.1016/j.cell.2005.10.023
    • (2005) Cell , vol.123 , pp. 581-592
    • Carrozza, M.J.1    Li, B.2    Florens, L.3    Suganuma, T.4    Swanson, S.K.5    Lee, K.K.6
  • 15
    • 77954763982 scopus 로고    scopus 로고
    • Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response
    • Chen, L. T., Luo, M., Wang, Y. Y., and Wu, K. (2010a). Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response. J. Exp. Bot. 61, 3345-3353. doi: 10.1093/jxb/erq154
    • (2010) J. Exp. Bot. , vol.61 , pp. 3345-3353
    • Chen, L.T.1    Luo, M.2    Wang, Y.Y.3    Wu, K.4
  • 16
    • 77954946640 scopus 로고    scopus 로고
    • Epigenetic performers in plants
    • Chen, M., Lv, S., and Meng, Y. (2010b). Epigenetic performers in plants. Develop. Growth Differ. 52, 555-566. doi: 10.1111/j.1440-169X.2010.01192.x
    • (2010) Develop. Growth Differ. , vol.52 , pp. 555-566
    • Chen, M.1    Lv, S.2    Meng, Y.3
  • 17
    • 78449274516 scopus 로고    scopus 로고
    • Role of histone deacetylases HDA6 and HDA19 in ABA and abiotic stress response
    • Chen, L. T., and Wu, K. (2010). Role of histone deacetylases HDA6 and HDA19 in ABA and abiotic stress response.Plant Signal. Behav. 5, 1318-1320. doi: 10.4161/psb.5.10.13168
    • (2010) Plant Signal. Behav. , vol.5 , pp. 1318-1320
    • Chen, L.T.1    Wu, K.2
  • 18
    • 84855691295 scopus 로고    scopus 로고
    • The Rpd3 core complex is a chromatin stabilization module
    • Chen, X. F., Kuryan, B., Kitada, T., Tran, N., Li, J. Y., Kurdistani, S., et al. (2012). The Rpd3 core complex is a chromatin stabilization module. Curr. Biol. 22, 56-63. doi: 10.1016/j.cub.2011.11.042
    • (2012) Curr. Biol. , vol.22 , pp. 56-63
    • Chen, X.F.1    Kuryan, B.2    Kitada, T.3    Tran, N.4    Li, J.Y.5    Kurdistani, S.6
  • 19
    • 34648834403 scopus 로고    scopus 로고
    • Cold stress regulation of gene expression in plants
    • Chinnusamy, V., Zhu, J., and Zhu, J. K. (2007). Cold stress regulation of gene expression in plants. Trends Plant Sci.12, 444-451. doi: 10.1016/j.tplants.2007.07.002
    • (2007) Trends Plant Sci. , vol.12 , pp. 444-451
    • Chinnusamy, V.1    Zhu, J.2    Zhu, J.K.3
  • 20
    • 62349111195 scopus 로고    scopus 로고
    • Epigenetic regulation of stress responses in plants
    • Chinnusamy, V., and Zhu, J. K. (2009). Epigenetic regulation of stress responses in plants. Curr. Opin. Plant Biol.12, 133-139. doi: 10.1016/j.pbi.2008.12.006
    • (2009) Curr. Opin. Plant Biol. , vol.12 , pp. 133-139
    • Chinnusamy, V.1    Zhu, J.K.2
  • 21
    • 34247399015 scopus 로고    scopus 로고
    • Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants
    • Choi, C. S., and Sano, H. (2007). Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol. Genet. Genomics 277, 589-600. doi: 10.1007/s00438-007-0209-1
    • (2007) Mol. Genet. Genomics , vol.277 , pp. 589-600
    • Choi, C.S.1    Sano, H.2
  • 22
    • 84887106752 scopus 로고    scopus 로고
    • Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters
    • Choi, K., Zhao, X., Kelly, K. A., Venn, O., Higgins, J. D., Yelina, N. E., et al. (2013). Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters. Nat. Genet. 45, 1327-1336. doi: 10.1038/ng.2766
    • (2013) Nat. Genet. , vol.45 , pp. 1327-1336
    • Choi, K.1    Zhao, X.2    Kelly, K.A.3    Venn, O.4    Higgins, J.D.5    Yelina, N.E.6
  • 23
    • 0037067658 scopus 로고    scopus 로고
    • DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in Arabidopsis
    • Choi, Y., Gehring, M., Johnson, L., Hannon, M., Harada, J. J., Goldberg, R. B., et al. (2002). DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in Arabidopsis. Cell 110, 33-42. doi: 10.1016/S0092-8674(02)00807-3
    • (2002) Cell , vol.110 , pp. 33-42
    • Choi, Y.1    Gehring, M.2    Johnson, L.3    Hannon, M.4    Harada, J.J.5    Goldberg, R.B.6
  • 24
    • 84868122260 scopus 로고    scopus 로고
    • Deposition of histone variant H2A.Z within gene bodiles regulates responsive genes
    • Coleman-Derr, D., and Zilberman, D. (2012). Deposition of histone variant H2A.Z within gene bodiles regulates responsive genes. PLoS Genet. 8:e1002988. doi: 10.1371/journal.pgen.1002988
    • (2012) PLoS Genet. , vol.8
    • Coleman-Derr, D.1    Zilberman, D.2
  • 25
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • Cong, L., Ran, F. A., Lin, S., Barretto, R., Habib, N., Hsu, P. D., et al. (2013). Multiplex genome engineering using CRISPR/Cas systems. Science 339, 819-823. doi: 10.1126/science.1231143
    • (2013) Science , vol.339 , pp. 819-823
    • Cong, L.1    Ran, F.A.2    Lin, S.3    Barretto, R.4    Habib, N.5    Hsu, P.D.6
  • 26
    • 0034938473 scopus 로고    scopus 로고
    • Comparative analysis of HD2 type histone deacetylases in higher plants
    • Dangl, M., Brosch, G., Haas, H., Loidl, P., and Lusser, A. (2001). Comparative analysis of HD2 type histone deacetylases in higher plants. Planta 213, 280-285. doi: 10.1007/s004250000506
    • (2001) Planta , vol.213 , pp. 280-285
    • Dangl, M.1    Brosch, G.2    Haas, H.3    Loidl, P.4    Lusser, A.5
  • 27
    • 77249130800 scopus 로고    scopus 로고
    • Gene regulation: A chromatin thermostat
    • Deal, R. B., and Henikoff, S. (2010). Gene regulation: a chromatin thermostat. Nature 463, 887-888. doi: 10.1038/463887a
    • (2010) Nature , vol.463 , pp. 887-888
    • Deal, R.B.1    Henikoff, S.2
  • 28
    • 34249820562 scopus 로고    scopus 로고
    • Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z
    • Deal, R. B., Topp, C. N., McKinney, E. C., and Meagher, R. B. (2007). Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z. Plant Cell 19, 74-83. doi: 10.1105/tpc.106.048447
    • (2007) Plant Cell , vol.19 , pp. 74-83
    • Deal, R.B.1    Topp, C.N.2    McKinney, E.C.3    Meagher, R.B.4
  • 30
    • 67650609683 scopus 로고    scopus 로고
    • Epigenetic chromatin modifiers in barley: I. cloning, mapping and expression analysis of the plant specific HD2 family of histone deacetylases from barley, during seed development and after hormonal treatment
    • Demetriou, K., Kapazoglou, A., Tondelli, A., Francia, T., Stanca, M. A., Bladenopoulos, K., et al. (2009). Epigenetic chromatin modifiers in barley: I. cloning, mapping and expression analysis of the plant specific HD2 family of histone deacetylases from barley, during seed development and after hormonal treatment. Physiol. Plant. 136, 358-368. doi: 10.1111/j.1399-3054.2009.01236.x
    • (2009) Physiol. Plant. , vol.136 , pp. 358-368
    • Demetriou, K.1    Kapazoglou, A.2    Tondelli, A.3    Francia, T.4    Stanca, M.A.5    Bladenopoulos, K.6
  • 31
    • 79957622844 scopus 로고    scopus 로고
    • The Arabidopsis trithorax-like factor ATX1 functions in dehydration stress responses via ABA-dependent and ABA-independent pathways
    • Ding, Y., Avramova, Z., and Fromm, M. (2011). The Arabidopsis trithorax-like factor ATX1 functions in dehydration stress responses via ABA-dependent and ABA-independent pathways. Plant J. 66, 735-744. doi: 10.1111/j.1365-313X.2011.04534.x
    • (2011) Plant J. , vol.66 , pp. 735-744
    • Ding, Y.1    Avramova, Z.2    Fromm, M.3
  • 32
    • 84859207508 scopus 로고    scopus 로고
    • Multiple exposures to drought 'train' transcriptional responses inArabidopsis
    • Ding, Y., Fromm, M., and Avramova, Z. (2012). Multiple exposures to drought 'train' transcriptional responses inArabidopsis. Nat. Commun. 3, 740. doi: 10.1038/ncomms1732
    • (2012) Nat. Commun. , vol.3 , pp. 740
    • Ding, Y.1    Fromm, M.2    Avramova, Z.3
  • 33
    • 33744482285 scopus 로고    scopus 로고
    • The negative regulator of plant cold responses, HOS1, is a RING E3 ligase that mediates the ubiquitination and degradation of ICE1
    • Dong, C. H., Agarwal, M., Zhang, Y., Xie, Q., and Zhu, J. K. (2006). The negative regulator of plant cold responses, HOS1, is a RING E3 ligase that mediates the ubiquitination and degradation of ICE1. Proc. Natl. Acad. Sci. U.S.A.103, 8281-8286. doi: 10.1073/pnas.0602874103
    • (2006) Proc. Natl. Acad. Sci. U.S.A. , vol.103 , pp. 8281-8286
    • Dong, C.H.1    Agarwal, M.2    Zhang, Y.3    Xie, Q.4    Zhu, J.K.5
  • 34
    • 70350651506 scopus 로고    scopus 로고
    • A single amino acid change in the enhancer of zeste ortholog CURLY LEAF results in vernalization-independent, rapid flowering in Arabidopsis
    • Doyle, M. R., and Amasino, R. M. (2009). A single amino acid change in the enhancer of zeste ortholog CURLY LEAF results in vernalization-independent, rapid flowering in Arabidopsis. Plant Physiol. 151, 1688-1697. doi: 10.1104/pp.109.145581
    • (2009) Plant Physiol. , vol.151 , pp. 1688-1697
    • Doyle, M.R.1    Amasino, R.M.2
  • 35
    • 35848955414 scopus 로고    scopus 로고
    • In vitro specificities ofArabidopsis co-activator histone acetyltransferases: Implications for histone hyperacetylation in gene activation
    • Earley, K. W., Shook, M. S., Brower-Toland, B., Hicks, L., and Pikaard, C. S. (2007). In vitro specificities ofArabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation.Plant J. 52, 615-626. doi: 10.1111/j.1365-313X.2007.03264.x
    • (2007) Plant J. , vol.52 , pp. 615-626
    • Earley, K.W.1    Shook, M.S.2    Brower-Toland, B.3    Hicks, L.4    Pikaard, C.S.5
  • 36
    • 78049414227 scopus 로고    scopus 로고
    • Epigenetic reprogramming in plant and animal development
    • Feng, S., Jacobsen, S. E., and Reik, W. (2010). Epigenetic reprogramming in plant and animal development. Science330, 622-627. doi: 10.1126/science.1190614
    • (2010) Science , vol.330 , pp. 622-627
    • Feng, S.1    Jacobsen, S.E.2    Reik, W.3
  • 37
    • 84892443831 scopus 로고    scopus 로고
    • Expression analysis of histone acetyltransferases in rice under drought stress
    • Fang, H., Liu, X., Thorn, G., Duan, J., and Tian, L. (2014). Expression analysis of histone acetyltransferases in rice under drought stress. Biochem. Biophys. Res. Commun. 443, 400-405. doi: 10.1016/j.bbrc.2013.11.102
    • (2014) Biochem. Biophys. Res. Commun. , vol.443 , pp. 400-405
    • Fang, H.1    Liu, X.2    Thorn, G.3    Duan, J.4    Tian, L.5
  • 38
    • 36048973238 scopus 로고    scopus 로고
    • Vernalization-induced trimethylation of histone H3 lysine 27 at FLC is not maintained in mitotically quiescent cells
    • Finnegan, E. J., and Dennis, E. S. (2007). Vernalization-induced trimethylation of histone H3 lysine 27 at FLC is not maintained in mitotically quiescent cells. Curr. Biol. 17, 1978-1983. doi: 10.1016/j.cub.2007.10.026
    • (2007) Curr. Biol. , vol.17 , pp. 1978-1983
    • Finnegan, E.J.1    Dennis, E.S.2
  • 39
    • 79959898336 scopus 로고    scopus 로고
    • ABA-mediated transcriptional regulation in response to osmotic stress in plants
    • Fujita, Y., Fujita, M., Shinozaki, K., and Yamaguchi-Shinozaki, K. (2011). ABA-mediated transcriptional regulation in response to osmotic stress in plants. J. Plant Res. 124, 509-525. doi: 10.1007/s10265-011-0412-3
    • (2011) J. Plant Res. , vol.124 , pp. 509-525
    • Fujita, Y.1    Fujita, M.2    Shinozaki, K.3    Yamaguchi-Shinozaki, K.4
  • 40
    • 77952090735 scopus 로고    scopus 로고
    • An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation
    • Gao, Z., Liu, H. L., Daxinger, L., Pontes, O., He, X., Qian, W., et al. (2010). An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. Nature 465, 106-109. doi: 10.1038/nature09025
    • (2010) Nature , vol.465 , pp. 106-109
    • Gao, Z.1    Liu, H.L.2    Daxinger, L.3    Pontes, O.4    He, X.5    Qian, W.6
  • 42
    • 33845755946 scopus 로고    scopus 로고
    • Heterochromatin revisited
    • Grewal, S. I., and Jia, S. (2007). Heterochromatin revisited. Nat. Rev. Genet. 8, 35-46. doi: 10.1038/nrg2008
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 35-46
    • Grewal, S.I.1    Jia, S.2
  • 43
    • 70549085009 scopus 로고    scopus 로고
    • HKT transporter-mediated salinity resistance mechanisms inArabidopsis and monocot crop plants
    • Horie, T., Hauser, F., and Schroeder, J. I. (2009). HKT transporter-mediated salinity resistance mechanisms inArabidopsis and monocot crop plants. Trends Plant Sci. 14, 660-668. doi: 10.1016/j.tplants.2009.08.009
    • (2009) Trends Plant Sci. , vol.14 , pp. 660-668
    • Horie, T.1    Hauser, F.2    Schroeder, J.I.3
  • 44
    • 84868568378 scopus 로고    scopus 로고
    • Cold stress selectively unsilences tandem repeats in heterochromatin associated with accumulation of H3K9ac
    • Hu, Y., Zhang, L., He, S., Huang, M., Tan, J., Zhao, L., et al. (2012). Cold stress selectively unsilences tandem repeats in heterochromatin associated with accumulation of H3K9ac. Plant Cell Environ. 35, 2130-2142. doi: 10.1111/j.1365-3040.2012.02541.x
    • (2012) Plant Cell Environ. , vol.35 , pp. 2130-2142
    • Hu, Y.1    Zhang, L.2    He, S.3    Huang, M.4    Tan, J.5    Zhao, L.6
  • 45
    • 79960649586 scopus 로고    scopus 로고
    • Trichostatin A selectively suppresses the cold-induced transcription of the ZmDREB1 gene in maize
    • Hu, Y., Zhang, L., Zhao, L., Li, J., He, S., Zhou, K., et al. (2011). Trichostatin A selectively suppresses the cold-induced transcription of the ZmDREB1 gene in maize. PLoS ONE 6:e22132. doi: 10.1371/journal.pone.0022132
    • (2011) PLoS ONE , vol.6
    • Hu, Y.1    Zhang, L.2    Zhao, L.3    Li, J.4    He, S.5    Zhou, K.6
  • 46
    • 83355161456 scopus 로고    scopus 로고
    • Phylogenetic analysis and classification of the Brassica rapaSET-domain protein family
    • Huang, Y., Liu, C., Shen, W. H., and Ruan, Y. (2011). Phylogenetic analysis and classification of the Brassica rapaSET-domain protein family. BMC Plant Biol. 11:175. doi: 10.1186/1471-2229-11-175
    • (2011) BMC Plant Biol. , vol.11 , pp. 175
    • Huang, Y.1    Liu, C.2    Shen, W.H.3    Ruan, Y.4
  • 47
    • 84866140080 scopus 로고    scopus 로고
    • Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes
    • Ibarra, C. A., Feng, X., Schoft, V. K., Hsieh, T. F., Uzawa, R., Rodrigues, J. A., et al. (2012). Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes. Science 337, 1360-1364. doi: 10.1126/science.1224839
    • (2012) Science , vol.337 , pp. 1360-1364
    • Ibarra, C.A.1    Feng, X.2    Schoft, V.K.3    Hsieh, T.F.4    Uzawa, R.5    Rodrigues, J.A.6
  • 48
    • 79953746026 scopus 로고    scopus 로고
    • An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
    • Ito, H., Gaubert, H., Bucher, E., Mirouze, M., Vaillant, I., and Paszkowski, J. (2011). An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. Nature 472, 115-119, doi: 10.1038/nature09861
    • (2011) Nature , vol.472 , pp. 115-119
    • Ito, H.1    Gaubert, H.2    Bucher, E.3    Mirouze, M.4    Vaillant, I.5    Paszkowski, J.6
  • 49
    • 0037041422 scopus 로고    scopus 로고
    • Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
    • Jackson, J. P., Lindroth, A. M., Cao, X., and Jacobsen, S. E. (2002). Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature 416, 556-560. doi: 10.1038/nature731
    • (2002) Nature , vol.416 , pp. 556-560
    • Jackson, J.P.1    Lindroth, A.M.2    Cao, X.3    Jacobsen, S.E.4
  • 50
    • 0032907728 scopus 로고    scopus 로고
    • Maintenance of genomic methylation requires a SWI2/SNF2-like protein
    • Jeddeloh, J. A., Stokes, T. L., and Richards, E. J. (1999). Maintenance of genomic methylation requires a SWI2/SNF2-like protein. Nat. Genet. 22, 94-97. doi: 10.1038/8803
    • (1999) Nat. Genet. , vol.22 , pp. 94-97
    • Jeddeloh, J.A.1    Stokes, T.L.2    Richards, E.J.3
  • 51
    • 33846931283 scopus 로고    scopus 로고
    • The SRA methyl-cytosine-binding domain links DNA and histone methylation
    • Johnson, L. M., Bostick, M., Zhang, X., Kraft, E., Henderson, I., Callis, J., et al. (2007). The SRA methyl-cytosine-binding domain links DNA and histone methylation. Curr. Biol. 17, 379-384. doi: 10.1016/j.cub.2007.01.009
    • (2007) Curr. Biol. , vol.17 , pp. 379-384
    • Johnson, L.M.1    Bostick, M.2    Zhang, X.3    Kraft, E.4    Henderson, I.5    Callis, J.6
  • 52
    • 84891531165 scopus 로고    scopus 로고
    • The cold signaling attenuator HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 activates FLOWERING LOCUS C transcription via chromatin remodeling under short-term cold stress in Arabidopsis
    • Jung, J. H., Park, J. H., Lee, S., To, T. K., Kim, J. M., Seki, M., et al. (2013). The cold signaling attenuator HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 activates FLOWERING LOCUS C transcription via chromatin remodeling under short-term cold stress in Arabidopsis. Plant Cell 25, 4378-4390. doi: 10.1105/tpc.113.118364
    • (2013) Plant Cell , vol.25 , pp. 4378-4390
    • Jung, J.H.1    Park, J.H.2    Lee, S.3    To, T.K.4    Kim, J.M.5    Seki, M.6
  • 53
    • 0031865050 scopus 로고    scopus 로고
    • Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo
    • Kadosh, D., and Struhl, K. (1998). Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo. Mol. Cell. Biol. 18, 5121-5127.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 5121-5127
    • Kadosh, D.1    Struhl, K.2
  • 54
    • 79953056595 scopus 로고    scopus 로고
    • Arabidopsis thaliana transcriptional co-activators ADA2b and SGF29a are implicated in salt stress responses
    • Kaldis, A., Tsementzi, D., Tanriverdi, O., and Vlachonasios, K. E. (2011). Arabidopsis thaliana transcriptional co-activators ADA2b and SGF29a are implicated in salt stress responses. Planta 233, 749-762. doi: 10.1007/s00425-010-1337-0
    • (2011) Planta , vol.233 , pp. 749-762
    • Kaldis, A.1    Tsementzi, D.2    Tanriverdi, O.3    Vlachonasios, K.E.4
  • 56
    • 42649089072 scopus 로고    scopus 로고
    • A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation
    • Kanno, T., Bucher, E., Daxinger, L., Huettel, B., Böhmdorfer, G., Gregor, W., et al. (2008). A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation.Nat. Genet. 40, 670-675. doi: 10.1038/ng.119
    • (2008) Nat. Genet. , vol.40 , pp. 670-675
    • Kanno, T.1    Bucher, E.2    Daxinger, L.3    Huettel, B.4    Böhmdorfer, G.5    Gregor, W.6
  • 57
    • 2342505910 scopus 로고    scopus 로고
    • Involvement of putative SNF2 chromatin remodeling factor DRD1 in RNA-directed DNA methylation
    • Kanno, T., Mette, M. F., Kreil, D. P., Aufsatz, W., Matzke, M., and Matzke, A. J. (2004). Involvement of putative SNF2 chromatin remodeling factor DRD1 in RNA-directed DNA methylation. Curr. Biol. 14, 801-805. doi: 10.1016/j.cub.2004.04.037
    • (2004) Curr. Biol. , vol.14 , pp. 801-805
    • Kanno, T.1    Mette, M.F.2    Kreil, D.P.3    Aufsatz, W.4    Matzke, M.5    Matzke, A.J.6
  • 58
    • 84862991957 scopus 로고    scopus 로고
    • Salt stress induced variation in DNA methylation pattern and its influence on gene expression in contrasting rice genotypes
    • Karan, R., DeLeon, T., Biradar, H., and Subudhi, P. K. (2012). Salt stress induced variation in DNA methylation pattern and its influence on gene expression in contrasting rice genotypes. PLoS ONE 7:e40203. doi: 10.1371/journal.pone.0040203
    • (2012) PLoS ONE , vol.7
    • Karan, R.1    DeLeon, T.2    Biradar, H.3    Subudhi, P.K.4
  • 59
    • 84861056564 scopus 로고    scopus 로고
    • Transition of chromatin status during the process of recovery from drought stress in Arabidopsis thaliana
    • Kim, J. M., To, T. K., Ishida, J., Matsui, A., Kimura, H., and Seki, M. (2012). Transition of chromatin status during the process of recovery from drought stress in Arabidopsis thaliana. Plant Cell Physiol. 53, 847-856. doi: 10.1093/pcp/pcs053
    • (2012) Plant Cell Physiol. , vol.53 , pp. 847-856
    • Kim, J.M.1    To, T.K.2    Ishida, J.3    Matsui, A.4    Kimura, H.5    Seki, M.6
  • 60
    • 54149108452 scopus 로고    scopus 로고
    • Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana
    • Kim, J. M., To, T. K., Ishida, J., Morosawa, T., Kawashima, M., Matsui, A., et al. (2008). Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana. Plant Cell Physiol.49, 1580-1588. doi: 10.1093/pcp/pcn133
    • (2008) Plant Cell Physiol. , vol.49 , pp. 1580-1588
    • Kim, J.M.1    To, T.K.2    Ishida, J.3    Morosawa, T.4    Kawashima, M.5    Matsui, A.6
  • 61
    • 1642515876 scopus 로고    scopus 로고
    • One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation
    • Kinoshita, T., Miura, A., Choi, Y., Kinoshita, Y., Cao, X., Jacobsen, S. E., et al. (2004). One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation. Science 303, 521-523. doi: 10.1126/science.1089835
    • (2004) Science , vol.303 , pp. 521-523
    • Kinoshita, T.1    Miura, A.2    Choi, Y.3    Kinoshita, Y.4    Cao, X.5    Jacobsen, S.E.6
  • 62
    • 18444370302 scopus 로고    scopus 로고
    • The SUMO E3 ligase RanBP2 promotes modification of the HDAC4 deacetylase
    • Kirsh, O., Seeler, J. S., Pichler, A., Gast, A., Müller, S., Miska, E., et al. (2002). The SUMO E3 ligase RanBP2 promotes modification of the HDAC4 deacetylase. EMBO J. 21, 2682-2691. doi: 10.1093/emboj/21.11.2682
    • (2002) EMBO J. , vol.21 , pp. 2682-2691
    • Kirsh, O.1    Seeler, J.S.2    Pichler, A.3    Gast, A.4    Müller, S.5    Miska, E.6
  • 63
    • 73149085055 scopus 로고    scopus 로고
    • H2A.Z-containing nucleosomes mediate the thermosensory response inArabidopsis
    • Kumar, S. V., and Wigge, P. A. (2010). H2A.Z-containing nucleosomes mediate the thermosensory response inArabidopsis. Cell 140, 136-147. doi: 10.1016/j.cell.2009.11.006
    • (2010) Cell , vol.140 , pp. 136-147
    • Kumar, S.V.1    Wigge, P.A.2
  • 64
    • 0029835806 scopus 로고    scopus 로고
    • Transcription-linked acetylation by Gcn5p of histone H3 and H4 at specific lysines
    • Kuo, M. H., Brownell, J. E., Sobel, R. E., Ranalli, T. A., Cook, R. G., Edmondson, D. G., et al. (1996). Transcription-linked acetylation by Gcn5p of histone H3 and H4 at specific lysines. Nature 383, 269-272. doi: 10.1038/383269a0
    • (1996) Nature , vol.383 , pp. 269-272
    • Kuo, M.H.1    Brownell, J.E.2    Sobel, R.E.3    Ranalli, T.A.4    Cook, R.G.5    Edmondson, D.G.6
  • 65
    • 2942518343 scopus 로고    scopus 로고
    • Mapping global histone acetylation patterns to gene expression
    • Kurdistani, S. K., Tavazoie, S., and Grunstein, M. (2004). Mapping global histone acetylation patterns to gene expression. Cell 117, 721-733. doi: 10.1016/j.cell.2004.05.023
    • (2004) Cell , vol.117 , pp. 721-733
    • Kurdistani, S.K.1    Tavazoie, S.2    Grunstein, M.3
  • 66
    • 70349522138 scopus 로고    scopus 로고
    • Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis
    • Kwon, C. S., Lee, D., Choi, G., and Chung, W. I. (2009). Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis. Plant J. 60, 112-121. doi: 10.1111/j.1365-313X.2009.03938.x
    • (2009) Plant J. , vol.60 , pp. 112-121
    • Kwon, C.S.1    Lee, D.2    Choi, G.3    Chung, W.I.4
  • 67
    • 77953129746 scopus 로고    scopus 로고
    • A protein complex required for Polymerase V transcripts and RNA-directed DNA methylation in Arabidopsis
    • Law, J. A., Ausin, I., Johnson, L. M., Vashisht, A. A., Zhu, J. K., Wohlschegel, J. A., et al. (2010). A protein complex required for Polymerase V transcripts and RNA-directed DNA methylation in Arabidopsis. Curr. Biol. 20, 951-956. doi: 10.1016/j.cub.2010.03.062
    • (2010) Curr. Biol. , vol.20 , pp. 951-956
    • Law, J.A.1    Ausin, I.2    Johnson, L.M.3    Vashisht, A.A.4    Zhu, J.K.5    Wohlschegel, J.A.6
  • 68
    • 84879417659 scopus 로고    scopus 로고
    • Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1
    • Law, J. A., Du, J., Hale, C. J., Feng, S., Krajewski, K., Palanca, A. M., et al. (2013). Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature 498, 385-389. doi: 10.1038/nature12178
    • (2013) Nature , vol.498 , pp. 385-389
    • Law, J.A.1    Du, J.2    Hale, C.J.3    Feng, S.4    Krajewski, K.5    Palanca, A.M.6
  • 69
    • 84899981514 scopus 로고    scopus 로고
    • Histone acetylation associated up-regulation of the cell wall related genes is involved in salt stress induced maize root swelling
    • Li, H., Yan, S., Zhao, L., Tan, J., Zhang, Q., Gao, F., et al. (2014). Histone acetylation associated up-regulation of the cell wall related genes is involved in salt stress induced maize root swelling. BMC Plant Biol. 14:105. doi: 10.1186/1471-2229-14-105
    • (2014) BMC Plant Biol. , vol.14 , pp. 105
    • Li, H.1    Yan, S.2    Zhao, L.3    Tan, J.4    Zhang, Q.5    Gao, F.6
  • 70
    • 70349662183 scopus 로고    scopus 로고
    • NuA4 and SWR1-C: Two chromatin-modifying complexes with overlapping functions and components
    • Lu, P. Y., Lévesque, N., and Kobor, M. S. (2009). NuA4 and SWR1-C: two chromatin-modifying complexes with overlapping functions and components. Biochem. Cell Biol. 87, 799-815. doi: 10.1139/O09-062
    • (2009) Biochem. Cell Biol. , vol.87 , pp. 799-815
    • Lu, P.Y.1    Lévesque, N.2    Kobor, M.S.3
  • 71
    • 84856618023 scopus 로고    scopus 로고
    • Chromatin modifications and remodeling in plant abiotic stress responses
    • Luo, M., Liu, X., Singh, P., Cui, Y., Zimmerli, L., and Wu, K. (2012a). Chromatin modifications and remodeling in plant abiotic stress responses. Biochem. Biophys. Acta 1819, 129-136. doi: 10.1016/j.bbagrm.2011.06.008
    • (2012) Biochem. Biophys. Acta , vol.1819 , pp. 129-136
    • Luo, M.1    Liu, X.2    Singh, P.3    Cui, Y.4    Zimmerli, L.5    Wu, K.6
  • 72
    • 84861398941 scopus 로고    scopus 로고
    • HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis
    • Luo, M., Wang, Y. Y., Liu, X., Yang, S., Lu, Q., Cui, Y., et al. (2012b). HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis. J. Exp. Bot. 63, 3297-3306. doi: 10.1093/jxb/ers059
    • (2012) J. Exp. Bot. , vol.63 , pp. 3297-3306
    • Luo, M.1    Wang, Y.Y.2    Liu, X.3    Yang, S.4    Lu, Q.5    Cui, Y.6
  • 73
    • 68449083728 scopus 로고    scopus 로고
    • The beauty of being a variant: H2A.Z and the SWR1 complex in plants
    • March-Díaz, R., and Reyes, J. C. (2009). The beauty of being a variant: H2A.Z and the SWR1 complex in plants. Mol. Plant 2, 565-577. doi: 10.1093/mp/ssp019
    • (2009) Mol. Plant , vol.2 , pp. 565-577
    • March-Díaz, R.1    Reyes, J.C.2
  • 74
    • 84863036797 scopus 로고    scopus 로고
    • A DNA 3′ phosphatase functions in active DNA demethylation in Arabidopsis
    • Martínez-Macías, M. I., Qian, W., Miki, D., Ponted, O., Liu, Y., Tang, K., et al. (2012). A DNA 3′ phosphatase functions in active DNA demethylation in Arabidopsis. Mol. Cell 45, 357-370. doi: 10.1016/j.molcel.2011.11.034
    • (2012) Mol. Cell , vol.45 , pp. 357-370
    • Martínez-Macías, M.I.1    Qian, W.2    Miki, D.3    Ponted, O.4    Liu, Y.5    Tang, K.6
  • 75
    • 49449094591 scopus 로고    scopus 로고
    • Arabidopsistranscriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array
    • Matsui, A., Ishida, J., Morosawa, T., Mochuzuki, Y., Kaminuma, E., Endo, T. A., et al. (2008). Arabidopsistranscriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array. Plant Cell Physiol. 49, 1135-1149. doi: 10.1093/pcp/pcn101
    • (2008) Plant Cell Physiol. , vol.49 , pp. 1135-1149
    • Matsui, A.1    Ishida, J.2    Morosawa, T.3    Mochuzuki, Y.4    Kaminuma, E.5    Endo, T.A.6
  • 76
    • 84901041535 scopus 로고    scopus 로고
    • RNA-directed DNA methylation: An epigenetic pathway of increasing complexity
    • Matzke, M. A., and Mosher, R. A. (2014). RNA-directed DNA methylation: an epigenetic pathway of increasing complexity. Nat. Rev. Genet. 15, 394-408. doi: 10.1038/nrg3683
    • (2014) Nat. Rev. Genet. , vol.15 , pp. 394-408
    • Matzke, M.A.1    Mosher, R.A.2
  • 77
    • 84886784631 scopus 로고    scopus 로고
    • Stress-free with Rpd3: A unique chromatin complex mediates the response to oxidative stress
    • McDaniel, S. L., and Strahl, B. D. (2013). Stress-free with Rpd3: a unique chromatin complex mediates the response to oxidative stress. Mol. Cell. Biol. 33, 3726-3727. doi: 10.1128/MCB.01000-13
    • (2013) Mol. Cell. Biol. , vol.33 , pp. 3726-3727
    • McDaniel, S.L.1    Strahl, B.D.2
  • 78
    • 78049235116 scopus 로고    scopus 로고
    • Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis
    • Miller, M. J., Barrett-Wilt, G. A., Hua, Z., and Vierstra, R. D. (2010). Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 107, 16512-16517. doi: 10.1073/pnas.1004181107
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 16512-16517
    • Miller, M.J.1    Barrett-Wilt, G.A.2    Hua, Z.3    Vierstra, R.D.4
  • 79
    • 84874050141 scopus 로고    scopus 로고
    • Quantitative proteomics reveals factors regulating RNA biology as dynamic targets of stress-induced SUMOylation in Arabidopsis
    • Miller, M. J., Scalf, M., Rytz, T. C., Hubler, S. L., Smith, L. M., and Vierstra, R. D. (2013). Quantitative proteomics reveals factors regulating RNA biology as dynamic targets of stress-induced SUMOylation in Arabidopsis. Mol. Cell. Proteomics 12, 449-463. doi: 10.1074/mcp.M112.025056
    • (2013) Mol. Cell. Proteomics , vol.12 , pp. 449-463
    • Miller, M.J.1    Scalf, M.2    Rytz, T.C.3    Hubler, S.L.4    Smith, L.M.5    Vierstra, R.D.6
  • 80
    • 79957679448 scopus 로고    scopus 로고
    • Epigenetic contribution to stress adaptation in plants
    • Mirouze, M., and Paszkowski, J. (2011). Epigenetic contribution to stress adaptation in plants. Curr. Opin. Plant Biol. 14, 267-274. doi: 10.1016/j.pbi.2011.03.004
    • (2011) Curr. Opin. Plant Biol. , vol.14 , pp. 267-274
    • Mirouze, M.1    Paszkowski, J.2
  • 81
    • 0348184963 scopus 로고    scopus 로고
    • ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex
    • Mizuguchi, G., Shen, X., Landry, J., Wu, W. H., Sen, S., and Wu, C. (2004). ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science 303, 343-348. doi: 10.1126/science.1090701
    • (2004) Science , vol.303 , pp. 343-348
    • Mizuguchi, G.1    Shen, X.2    Landry, J.3    Wu, W.H.4    Sen, S.5    Wu, C.6
  • 82
    • 50849112729 scopus 로고    scopus 로고
    • Genic and global functions for Paf1C in chromatin modification and gene expression in Arabidopsis
    • Oh, S., Park, S., and van Nocker, S. (2008). Genic and global functions for Paf1C in chromatin modification and gene expression in Arabidopsis. PLoS Genet. 4:e1000077. doi: 10.1371/journal.pgen.1000077
    • (2008) PLoS Genet. , vol.4
    • Oh, S.1    Park, S.2    van Nocker, S.3
  • 83
    • 84894417280 scopus 로고    scopus 로고
    • ABA control of plant macroelement membrane transport systems in response to water deficit and high salinity
    • Osakabe, Y., Yamaguchi-Shinozaki, K., Shinozaki, K., and Tran, L. S. P. (2014). ABA control of plant macroelement membrane transport systems in response to water deficit and high salinity. New Phytol. 202, 35-49. doi: 10.1111/nph.12613
    • (2014) New Phytol. , vol.202 , pp. 35-49
    • Osakabe, Y.1    Yamaguchi-Shinozaki, K.2    Shinozaki, K.3    Tran, L.S.P.4
  • 84
    • 0036929765 scopus 로고    scopus 로고
    • Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes
    • Pandey, R., Muller, A., Napoli, C. A., Selinger, D. A., Pikaard, C. S., Richards, E. J., et al. (2002). Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res. 30, 5036-5055. doi: 10.1093/nar/gkf660
    • (2002) Nucleic Acids Res. , vol.30 , pp. 5036-5055
    • Pandey, R.1    Muller, A.2    Napoli, C.A.3    Selinger, D.A.4    Pikaard, C.S.5    Richards, E.J.6
  • 85
    • 77649186483 scopus 로고    scopus 로고
    • Epigenetic chromatin modifiers in barley: III. Isolation and characterization of the barley GNAT-MYST family of histone acetyltransferases and responses to exogenous ABA
    • Papaefthimiou, D., Likotrafiti, E., Kapazoglou, A., Bladenopoulos, K., and Tsaftaris, A. (2010). Epigenetic chromatin modifiers in barley: III. Isolation and characterization of the barley GNAT-MYST family of histone acetyltransferases and responses to exogenous ABA. Plant Phyiol. Biochem. 48, 98-107. doi: 10.1016/j.plaphy.2010.01.002
    • (2010) Plant Phyiol. Biochem. , vol.48 , pp. 98-107
    • Papaefthimiou, D.1    Likotrafiti, E.2    Kapazoglou, A.3    Bladenopoulos, K.4    Tsaftaris, A.5
  • 86
    • 0020479077 scopus 로고
    • Phosphorylation of histones 1 and 3 and nonhistone high mobility group 14 by an endogenous kinase in HeLa metaphase chromosomes
    • Paulson, J. R., and Taylor, S. S. (1982). Phosphorylation of histones 1 and 3 and nonhistone high mobility group 14 by an endogenous kinase in HeLa metaphase chromosomes. J. Biol. Chem. 257, 6064-6072.
    • (1982) J. Biol. Chem. , vol.257 , pp. 6064-6072
    • Paulson, J.R.1    Taylor, S.S.2
  • 88
    • 84886488714 scopus 로고    scopus 로고
    • Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis
    • Perrella, G., Lopez-Vernaza, M. A., Carr, C., Sani, E., Grossele, V., Verduyn, C., et al. (2013). Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis. Plant Cell 25, 3491-3505. doi: 10.1105/tpc.113.114835
    • (2013) Plant Cell , vol.25 , pp. 3491-3505
    • Perrella, G.1    Lopez-Vernaza, M.A.2    Carr, C.3    Sani, E.4    Grossele, V.5    Verduyn, C.6
  • 89
    • 23944462969 scopus 로고    scopus 로고
    • Genome-wide map of nucleosome acetylation and methylation in yeast
    • Pokholok, D. K., Harbison, C. T., Levine, S., Cole, M., Hannett, N. M., Lee, T. I., et al. (2005). Genome-wide map of nucleosome acetylation and methylation in yeast. Cell 122, 517-527. doi: 10.1016/j.cell.2005.06.026
    • (2005) Cell , vol.122 , pp. 517-527
    • Pokholok, D.K.1    Harbison, C.T.2    Levine, S.3    Cole, M.4    Hannett, N.M.5    Lee, T.I.6
  • 90
    • 79955434258 scopus 로고    scopus 로고
    • Arabidopsis histone lysine methyltransferases
    • Pontvianne, E., Blevins, T., and Pikaard, C. S. (2010). Arabidopsis histone lysine methyltransferases. Adv. Bot. Res.53, 1-22. doi: 10.1016/S0065-2296(10)53001-5
    • (2010) Adv. Bot. Res. , vol.53 , pp. 1-22
    • Pontvianne, E.1    Blevins, T.2    Pikaard, C.S.3
  • 91
    • 84875628503 scopus 로고    scopus 로고
    • The RdDM pathway is required for basal heat tolerance in Arabidopsis
    • Popova, O. V., Dihn, H. Q., Aufsatz, W., and Jonak, C. (2013). The RdDM pathway is required for basal heat tolerance in Arabidopsis. Mol. Plant 6, 396-410. doi: 10.1093/mp/sst023
    • (2013) Mol. Plant , vol.6 , pp. 396-410
    • Popova, O.V.1    Dihn, H.Q.2    Aufsatz, W.3    Jonak, C.4
  • 92
    • 84862298246 scopus 로고    scopus 로고
    • A histone acetyltransferase regulates active DNA demethylation in Arabidopsis
    • Qian, W., Miki, D., Zhang, H., Liu, Y., Zhang, X., Tang, K., et al. (2012). A histone acetyltransferase regulates active DNA demethylation in Arabidopsis. Science 336, 1445-1448. doi: 10.1126/science.1219416
    • (2012) Science , vol.336 , pp. 1445-1448
    • Qian, W.1    Miki, D.2    Zhang, H.3    Liu, Y.4    Zhang, X.5    Tang, K.6
  • 93
    • 34247639086 scopus 로고    scopus 로고
    • SIN-fully silent: HDAC complex in fission yeast
    • Roguev, A., and Krogan, N. J. (2007). SIN-fully silent: HDAC complex in fission yeast. Nat. Struct. Mol. Biol. 14, 358-359. doi: 10.1038/nsmb0507-358
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 358-359
    • Roguev, A.1    Krogan, N.J.2
  • 94
    • 84903287063 scopus 로고    scopus 로고
    • Differential acetylation of histone H3 at the regulatory region of OsDREB1b facilitates chromatin remodeling and transcription activation during cold stress
    • Roy, D., Paul, A., Roy, A., Ghosh, R., Ganguly, P., and Chaudhuri, S. (2014). Differential acetylation of histone H3 at the regulatory region of OsDREB1b facilitates chromatin remodeling and transcription activation during cold stress. PLoS ONE 9:e100343. doi: 10.1371/journal.pone.0100343
    • (2014) PLoS ONE , vol.9
    • Roy, D.1    Paul, A.2    Roy, A.3    Ghosh, R.4    Ganguly, P.5    Chaudhuri, S.6
  • 95
    • 77952119807 scopus 로고    scopus 로고
    • The Rpd3L HDAC complex is essential for the heat stress response in yeast
    • Ruiz-Roig, C., Vieitez, C., Posas, F., and de Nadal, E. (2010). The Rpd3L HDAC complex is essential for the heat stress response in yeast. Mol. Microbiol. 76, 1049-1062. doi: 10.1111/j.1365-2958.2010.07167.x
    • (2010) Mol. Microbiol. , vol.76 , pp. 1049-1062
    • Ruiz-Roig, C.1    Vieitez, C.2    Posas, F.3    de Nadal, E.4
  • 96
    • 0032560117 scopus 로고    scopus 로고
    • Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3
    • Rundlett, S. E., Carmen, A, A., Suka, N., Turner, B. M., and Grunstein, M. (1998). Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3. Nature 392, 831-835. doi: 10.1038/33952
    • (1998) Nature , vol.392 , pp. 831-835
    • Rundlett, S.E.1    Carmen, A.A.2    Suka, N.3    Turner, B.M.4    Grunstein, M.5
  • 97
    • 84878894271 scopus 로고    scopus 로고
    • Hyperosmotic priming of Arabidopsisseedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome
    • Sani, E., Herzyk, P., Perrella, G., Colot, V., and Amtmann, A. (2013). Hyperosmotic priming of Arabidopsisseedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome. Genome Biol. 14, R59. doi: 10.1186/gb-2013-14-6-r59
    • (2013) Genome Biol. , vol.14
    • Sani, E.1    Herzyk, P.2    Perrella, G.3    Colot, V.4    Amtmann, A.5
  • 99
    • 34547890019 scopus 로고    scopus 로고
    • Functions of site-specific histone acetylation and deacetylation
    • Shahbazian, M. D., and Grunstein, M. (2007). Functions of site-specific histone acetylation and deacetylation.Annu. Rev. Biochem. 76, 75-100. doi: 10.1146/annurev.biochem.76.052705.162114
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 75-100
    • Shahbazian, M.D.1    Grunstein, M.2
  • 100
    • 33846798370 scopus 로고    scopus 로고
    • Gene networks involved in drought stress response and tolerance
    • Shinozaki, K., and Yamaguchi-Shinozaki, K. (2007). Gene networks involved in drought stress response and tolerance. J. Exp. Bot. 58, 221-227. doi: 10.1093/jxb/erl164
    • (2007) J. Exp. Bot. , vol.58 , pp. 221-227
    • Shinozaki, K.1    Yamaguchi-Shinozaki, K.2
  • 101
    • 84897942844 scopus 로고    scopus 로고
    • Direct measurement of transcription rates reveals multiple mechanisms for configuration of the Arabidopsis ambient temperature response
    • Sidaway-Lee, K., Costa, M. J., Rand, D. A., Finkenstadt, B., and Penfield, S. (2014). Direct measurement of transcription rates reveals multiple mechanisms for configuration of the Arabidopsis ambient temperature response. Genome Biol. 15, R45. doi: 10.1186/gb-2014-15-3-r45
    • (2014) Genome Biol. , vol.15
    • Sidaway-Lee, K.1    Costa, M.J.2    Rand, D.A.3    Finkenstadt, B.4    Penfield, S.5
  • 102
    • 36849067000 scopus 로고    scopus 로고
    • Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications
    • Sokol, A., Kwiatkowska, A., Jerzmanowski, A., and Prymakowska-Bosak, M. (2007). Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications. Planta 227, 245-254. doi: 10.1007/s00425-007-0612-1
    • (2007) Planta , vol.227 , pp. 245-254
    • Sokol, A.1    Kwiatkowska, A.2    Jerzmanowski, A.3    Prymakowska-Bosak, M.4
  • 103
    • 84868514154 scopus 로고    scopus 로고
    • Vernalization-a cold-induced epigenetic switch
    • Song, J., Angel, A., Howard, M., and Dean, C. (2012a). Vernalization-a cold-induced epigenetic switch. J. Cell Sci.125, 3723-3731. doi: 10.1242/jcs.084764
    • (2012) J. Cell Sci. , vol.125 , pp. 3723-3731
    • Song, J.1    Angel, A.2    Howard, M.3    Dean, C.4
  • 104
    • 84864021791 scopus 로고    scopus 로고
    • The dynamic changes of DNA methylation and histone modifications of salt responsive transcription factor genes in soybean
    • Song, Y., Ji, D., Li, S., Wang, P., Li, Q., and Xiang, F. (2012b). The dynamic changes of DNA methylation and histone modifications of salt responsive transcription factor genes in soybean. PLoS ONE 7:e41274. doi: 10.1371/journal.pone.0041274
    • (2012) PLoS ONE , vol.7
    • Song, Y.1    Ji, D.2    Li, S.3    Wang, P.4    Li, Q.5    Xiang, F.6
  • 105
    • 33646852573 scopus 로고    scopus 로고
    • Identification of AtHD2C as a novel regulator of abscisic acid responses inArabidopsis
    • Sridha, S., and Wu, K. (2006). Identification of AtHD2C as a novel regulator of abscisic acid responses inArabidopsis. Plant J. 46, 124-133. doi: 10.1111/j.1365-313X.2006.02678.x
    • (2006) Plant J. , vol.46 , pp. 124-133
    • Sridha, S.1    Wu, K.2
  • 106
    • 84901417366 scopus 로고    scopus 로고
    • Arabidopsis miR156 regulates tolerance to recurring environmental stress through SPL transcription factors
    • Stief, A., Altmann, S., Hoffmann, K., Pant, B. D., Scheible, W. R., and Baurle, I. (2014). Arabidopsis miR156 regulates tolerance to recurring environmental stress through SPL transcription factors. Plant Cell 26, 1792-1807. doi: 10.1105/tpc.114.123851
    • (2014) Plant Cell , vol.26 , pp. 1792-1807
    • Stief, A.1    Altmann, S.2    Hoffmann, K.3    Pant, B.D.4    Scheible, W.R.5    Baurle, I.6
  • 107
    • 0035312795 scopus 로고    scopus 로고
    • Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold-regulated gene expression
    • Stockinger, E. J., Mao, Y., Regier, M. K., Triezenberg, S. J., and Thomashow, M. F. (2001). Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold-regulated gene expression. Nucleic Acid Res. 29, 1524-1533. doi: 10.1093/nar/29.7.1524
    • (2001) Nucleic Acid Res. , vol.29 , pp. 1524-1533
    • Stockinger, E.J.1    Mao, Y.2    Regier, M.K.3    Triezenberg, S.J.4    Thomashow, M.F.5
  • 108
    • 0034839973 scopus 로고    scopus 로고
    • Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin
    • Suka, N., Suka, Y., Carmen, A. A., Wu, J., and Grunstein, M. (2001). Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin. Mol. Cell 8, 473-479. doi: 10.1016/S1097-2765(01)00301-X
    • (2001) Mol. Cell , vol.8 , pp. 473-479
    • Suka, N.1    Suka, Y.2    Carmen, A.A.3    Wu, J.4    Grunstein, M.5
  • 109
    • 84900869250 scopus 로고    scopus 로고
    • Epigenetic regulation of gene responsiveness in Arabidopsis
    • To, T. K., and Kim, J. M. (2014). Epigenetic regulation of gene responsiveness in Arabidopsis. Front. Plant Sci.4:548. doi: 10.3389/fpls.2013.00548
    • (2014) Front. Plant Sci. , vol.4 , pp. 548
    • To, T.K.1    Kim, J.M.2
  • 110
    • 79955591951 scopus 로고    scopus 로고
    • Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1
    • To, T. K., Kim, J. M., Matsui, A., Kurihara, Y., Morosawa, T., Ishida, J., et al. (2011a). Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1. PLoS Genet. 7:e1002055. doi: 10.1371/journal.pgen.1002055
    • (2011) PLoS Genet. , vol.7
    • To, T.K.1    Kim, J.M.2    Matsui, A.3    Kurihara, Y.4    Morosawa, T.5    Ishida, J.6
  • 112
    • 84863561552 scopus 로고    scopus 로고
    • Low relative humidity triggers RNA-directed de novo DNA methylation and suppression of genes controlling stomatal development
    • Tricker, P. J., Gibbings, J. G., Rodríguez-López, C. M., Hadley, P., and Wilkinson, M. J. (2012). Low relative humidity triggers RNA-directed de novo DNA methylation and suppression of genes controlling stomatal development. J. Exp. Bot. 63, 3799-3813. doi: 10.1093/jxb/ers076
    • (2012) J. Exp. Bot. , vol.63 , pp. 3799-3813
    • Tricker, P.J.1    Gibbings, J.G.2    Rodríguez-López, C.M.3    Hadley, P.4    Wilkinson, M.J.5
  • 113
    • 77951687828 scopus 로고    scopus 로고
    • 'Omics' analyses of regulatory networks in plant abiotic stress responses
    • Urano, K., Kurihara, Y., Seki, M., and Shinozaki, K. (2010). 'Omics' analyses of regulatory networks in plant abiotic stress responses. Curr. Opin. Plant Biol. 13, 132-138. doi: 10.1016/j.pbi.2009.12.006
    • (2010) Curr. Opin. Plant Biol. , vol.13 , pp. 132-138
    • Urano, K.1    Kurihara, Y.2    Seki, M.3    Shinozaki, K.4
  • 114
    • 78049400268 scopus 로고    scopus 로고
    • Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana
    • van Dijk, K., Ding, Y., Malkaram, S., Riethoven, J. M., Liu, R., Yang, J., et al. (2010). Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana. BMC Plant Biol. 10:238. doi: 10.1186/1471-2229-10-238
    • (2010) BMC Plant Biol. , vol.10 , pp. 238
    • van Dijk, K.1    Ding, Y.2    Malkaram, S.3    Riethoven, J.M.4    Liu, R.5    Yang, J.6
  • 115
    • 0242417589 scopus 로고    scopus 로고
    • Disruption mutations of ADA2b and GCN5 transcriptional adaptor genes dramatically affect Arabidopsis growth, development, and gene expression
    • Vlachonasios, K. E., Thomashow, M. F., and Triezenberg, S. J. (2003). Disruption mutations of ADA2b and GCN5 transcriptional adaptor genes dramatically affect Arabidopsis growth, development, and gene expression. Plant Cell 15, 626-638. doi: 10.1105/tpc.007922
    • (2003) Plant Cell , vol.15 , pp. 626-638
    • Vlachonasios, K.E.1    Thomashow, M.F.2    Triezenberg, S.J.3
  • 116
    • 0027303886 scopus 로고
    • Arabidopsis thaliana DNA methylation mutants
    • Vongs, A., Kakutani, T., Martienssen, R. A., and Richards, E. J. (1993). Arabidopsis thaliana DNA methylation mutants. Science 260, 1926-1928. doi: 10.1126/science.8316832
    • (1993) Science , vol.260 , pp. 1926-1928
    • Vongs, A.1    Kakutani, T.2    Martienssen, R.A.3    Richards, E.J.4
  • 117
    • 84903955589 scopus 로고    scopus 로고
    • Induced and constitutive DNA methylation in a salinity-tolerant wheat introgression line
    • Wang, M., Qin, L., Xie, C., Li, W., Yuan, J., Kong, L., et al. (2014). Induced and constitutive DNA methylation in a salinity-tolerant wheat introgression line. Plant Cell Physiol. 55, 1354-1365. doi: 10.1093/pcp/pcu059
    • (2014) Plant Cell Physiol. , vol.55 , pp. 1354-1365
    • Wang, M.1    Qin, L.2    Xie, C.3    Li, W.4    Yuan, J.5    Kong, L.6
  • 118
    • 84876313606 scopus 로고    scopus 로고
    • A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme
    • Watanabe, S., Radman-Livaja, M., Rando, O. J., and Peterson, C. L. (2013). A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme. Science 340, 195-199. doi: 10.1126/science.1229758
    • (2013) Science , vol.340 , pp. 195-199
    • Watanabe, S.1    Radman-Livaja, M.2    Rando, O.J.3    Peterson, C.L.4
  • 119
    • 84904995334 scopus 로고    scopus 로고
    • Histone chaperone ASF1 is involved in gene transcription activation in response to heat stress in Arabidopsis thaliana
    • Weng, M., Yang, Y., Feng, H., Pan, Z., Shen, W. H., Zhu, Y., et al. (2014). Histone chaperone ASF1 is involved in gene transcription activation in response to heat stress in Arabidopsis thaliana. Plant Cell Environ. 37, 2128-2138. doi: 10.1111/pce.12299
    • (2014) Plant Cell Environ. , vol.37 , pp. 2128-2138
    • Weng, M.1    Yang, Y.2    Feng, H.3    Pan, Z.4    Shen, W.H.5    Zhu, Y.6
  • 120
    • 3543035174 scopus 로고    scopus 로고
    • Packing principle: How DNA methylation and histone acetylation control the transcriptional activity of chromatin
    • Wolffe, A. P. (1998). Packing principle: how DNA methylation and histone acetylation control the transcriptional activity of chromatin. J. Exp. Zool. 282, 239-244. doi: 10.1002/(SICI)1097-010X(199809/10)282:1/2<239::AID-JEZ25>3.0.CO;2-N
    • (1998) J. Exp. Zool. , vol.282 , pp. 239-244
    • Wolffe, A.P.1
  • 121
    • 0038710729 scopus 로고    scopus 로고
    • Repression of gene expression by Arabidopsis HD2 histone deacetylases
    • Wu, K., Tian, L., Zhou, C., Brown, D., and Miki, B. (2003). Repression of gene expression by Arabidopsis HD2 histone deacetylases. Plant J. 34, 241-247. doi: 10.1046/j.1365-313X.2003.01714.x
    • (2003) Plant J. , vol.34 , pp. 241-247
    • Wu, K.1    Tian, L.2    Zhou, C.3    Brown, D.4    Miki, B.5
  • 122
    • 77954943542 scopus 로고    scopus 로고
    • Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation pattern associated with genes and centromeres in rice
    • Yan, H., Kikuchi, S., Neumann, P., Zhang, W., Wu, Y., Chen, F., et al. (2010). Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation pattern associated with genes and centromeres in rice. Plant J.63, 353-365. doi: 10.1111/j.1365-313X.2010.04246.x
    • (2010) Plant J. , vol.63 , pp. 353-365
    • Yan, H.1    Kikuchi, S.2    Neumann, P.3    Zhang, W.4    Wu, Y.5    Chen, F.6
  • 123
    • 39749127166 scopus 로고    scopus 로고
    • The Rpd3/Hda1 family of lysine deacetylases: From bacteria and yeast to mice and men
    • Yang, X. J., and Seto, E. (2008). The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men. Nat. Rev. Mol. Cell Biol. 9, 206-218. doi: 10.1038/nrm2346
    • (2008) Nat. Rev. Mol. Cell Biol. , vol.9 , pp. 206-218
    • Yang, X.J.1    Seto, E.2
  • 124
    • 84875741680 scopus 로고    scopus 로고
    • The Arabidopsisnucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
    • Zemach, A., Kim, M. Y., Hsieh, P. H., Coleman-Derr, D., Eshed-Williams, L., Thao, K., et al. (2013). The Arabidopsisnucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell 153, 193-205. doi: 10.1016/j.cell.2013.02.033
    • (2013) Cell , vol.153 , pp. 193-205
    • Zemach, A.1    Kim, M.Y.2    Hsieh, P.H.3    Coleman-Derr, D.4    Eshed-Williams, L.5    Thao, K.6
  • 125
    • 0032101179 scopus 로고    scopus 로고
    • Essential and redundant functions of histone acetylation revealed mutation of target lysines and loss of the Gcn5p acetyltransferase
    • Zhang, W., Bone, J. R., Edomondson, D. G., Turner, B. M., and Roth, S. Y. (1998). Essential and redundant functions of histone acetylation revealed mutation of target lysines and loss of the Gcn5p acetyltransferase. EMBO J. 17, 3155-3167. doi: 10.1093/emboj/17.11.3155
    • (1998) EMBO J. , vol.17 , pp. 3155-3167
    • Zhang, W.1    Bone, J.R.2    Edomondson, D.G.3    Turner, B.M.4    Roth, S.Y.5
  • 126
    • 43249091345 scopus 로고    scopus 로고
    • Distinctive core histone post-translational modification patterns in Arabidopsis thaliana
    • Zhang, K., Sridhar, V. V., Zhu, J., Kapoor, A., and Zhu, J. K. (2007). Distinctive core histone post-translational modification patterns in Arabidopsis thaliana. PLoS ONE 2:e1210. doi: 10.1371/journal.pone.0001210
    • (2007) PLoS ONE , vol.2
    • Zhang, K.1    Sridhar, V.V.2    Zhu, J.3    Kapoor, A.4    Zhu, J.K.5
  • 127
    • 43549115088 scopus 로고    scopus 로고
    • Epigenetic modification of centromeric chromatin: Hypomethylation of DNA sequences in CENH3-associated chromatin in Arabidopsis and maize
    • Zhang, W., Lee, H. R., Koo, D. H., and Jiang, J. (2008). Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in CENH3-associated chromatin in Arabidopsis and maize. Plant Cell 20, 25-34. doi: 10.1105/tpc.107.057083
    • (2008) Plant Cell , vol.20 , pp. 25-34
    • Zhang, W.1    Lee, H.R.2    Koo, D.H.3    Jiang, J.4
  • 128
    • 67650091251 scopus 로고    scopus 로고
    • Genome-wide analysis of mono-, di-, and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana
    • Zhang, X., Bernatavichute, Y. V., Cokus, S., Pellegrini, M., and Jacobsen, S. E. (2009). Genome-wide analysis of mono-, di-, and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana. Genome Biol. 10, R62. doi: 10.1186/gb-2009-10-6-r62
    • (2009) Genome Biol. , vol.10
    • Zhang, X.1    Bernatavichute, Y.V.2    Cokus, S.3    Pellegrini, M.4    Jacobsen, S.E.5
  • 129
    • 0035883954 scopus 로고    scopus 로고
    • Transcription regulation by histone methylation: Interplay between different covalent modifications of the core histone tails
    • Zhang, Y., and Reinberg, D. (2001). Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails. Genes Dev. 15, 2343-2360. doi: 10.1101/gad.927301
    • (2001) Genes Dev. , vol.15 , pp. 2343-2360
    • Zhang, Y.1    Reinberg, D.2
  • 130
    • 55249089475 scopus 로고    scopus 로고
    • ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis
    • Zheng, X., Pontes, O., Zhu, J., Miki, D., Zhang, F., Li, W. X., et al. (2009). ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis. Nature 455, 1259-1262. doi: 10.1038/nature07305
    • (2009) Nature , vol.455 , pp. 1259-1262
    • Zheng, X.1    Pontes, O.2    Zhu, J.3    Miki, D.4    Zhang, F.5    Li, W.X.6
  • 131
    • 84888330484 scopus 로고    scopus 로고
    • Structural insights into the histone H1-nucleosome complex
    • Zhou, B. R., Feng, H., Kato, H., Dai, L., Yang, Y., Zhou, Y., et al. (2013). Structural insights into the histone H1-nucleosome complex. Proc. Natl. Acad. Sci. U.S.A. 110, 19390-19395. doi: 10.1073/pnas.1314905110
    • (2013) Proc. Natl. Acad. Sci. U.S.A. , vol.110 , pp. 19390-19395
    • Zhou, B.R.1    Feng, H.2    Kato, H.3    Dai, L.4    Yang, Y.5    Zhou, Y.6
  • 132
    • 42449092033 scopus 로고    scopus 로고
    • Involvement of Arabidopsis HOS15 in histone deacetylation and cold tolerance
    • Zhu, J., Jeong, J. C., Zhu, Y., Sokolchik, I., Miyazaki, S., Zhu, J. K., et al. (2008). Involvement of Arabidopsis HOS15 in histone deacetylation and cold tolerance. Proc. Natl. Acad. Sci. U.S.A. 105, 4945-4950. doi: 10.1073/pnas.0801029105
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 4945-4950
    • Zhu, J.1    Jeong, J.C.2    Zhu, Y.3    Sokolchik, I.4    Miyazaki, S.5    Zhu, J.K.6
  • 133
    • 73349104113 scopus 로고    scopus 로고
    • Active DNA demethylation mediated by DNA glycosylases
    • Zhu, J. K. (2009). Active DNA demethylation mediated by DNA glycosylases. Annu. Rev. Genet. 43, 143-166. doi: 10.1146/annurev-genet-102108-134205
    • (2009) Annu. Rev. Genet. , vol.43 , pp. 143-166
    • Zhu, J.K.1
  • 134
    • 55549141877 scopus 로고    scopus 로고
    • Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
    • Zilberman, D., Coleman-Derr, D., Ballinger, T., and Henikoff, S. (2008). Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature 456, 125-129. doi: 10.1038/nature07324
    • (2008) Nature , vol.456 , pp. 125-129
    • Zilberman, D.1    Coleman-Derr, D.2    Ballinger, T.3    Henikoff, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.