-
1
-
-
79953240134
-
From nucleosome to chromosome: a dynamic organization of genetic information
-
10.1111/j.1365-313X.2011.04526.x, 21443619
-
Fransz P, de Jong H. From nucleosome to chromosome: a dynamic organization of genetic information. Plant J 2011, 66:4-17. 10.1111/j.1365-313X.2011.04526.x, 21443619.
-
(2011)
Plant J
, vol.66
, pp. 4-17
-
-
Fransz, P.1
de Jong, H.2
-
2
-
-
33847076849
-
Chromatin modifications and their function
-
10.1016/j.cell.2007.02.005, 17320507
-
Kouzarides T. Chromatin modifications and their function. Cell 2007, 128:693-705. 10.1016/j.cell.2007.02.005, 17320507.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
3
-
-
34250188803
-
Genomic patterns of DNA methylation: targets and function of an epigenetic mark
-
10.1016/j.ceb.2007.04.011, 17466503
-
Weber M, Schübeler D. Genomic patterns of DNA methylation: targets and function of an epigenetic mark. Curr Opin Cell Biol 2007, 19:273-280. 10.1016/j.ceb.2007.04.011, 17466503.
-
(2007)
Curr Opin Cell Biol
, vol.19
, pp. 273-280
-
-
Weber, M.1
Schübeler, D.2
-
4
-
-
80054693934
-
Genome-wide " re" -modeling of nucleosome positions
-
10.1016/j.cell.2011.09.042, 3207319, 22000006
-
Sadeh R, Allis CD. Genome-wide " re" -modeling of nucleosome positions. Cell 2011, 147:263-266. 10.1016/j.cell.2011.09.042, 3207319, 22000006.
-
(2011)
Cell
, vol.147
, pp. 263-266
-
-
Sadeh, R.1
Allis, C.D.2
-
5
-
-
33646048752
-
Chromosomal histone modification patterns - from conservation to diversity
-
10.1016/j.tplants.2006.02.008, 16546438
-
Fuchs J, Demidov D, Houben A, Schubert I. Chromosomal histone modification patterns - from conservation to diversity. Trends Plant Sci 2006, 11:199-208. 10.1016/j.tplants.2006.02.008, 16546438.
-
(2006)
Trends Plant Sci
, vol.11
, pp. 199-208
-
-
Fuchs, J.1
Demidov, D.2
Houben, A.3
Schubert, I.4
-
6
-
-
0036929765
-
Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes
-
10.1093/nar/gkf660, 137973, 12466527
-
Pandey R, Müller A, Napoli CA, Selinger DA, Pikaard CS, Richards EJ, Bender J, Mount DW, Jorgensen RA. Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res 2002, 30:5036-5055. 10.1093/nar/gkf660, 137973, 12466527.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 5036-5055
-
-
Pandey, R.1
Müller, A.2
Napoli, C.A.3
Selinger, D.A.4
Pikaard, C.S.5
Richards, E.J.6
Bender, J.7
Mount, D.W.8
Jorgensen, R.A.9
-
7
-
-
35848955414
-
In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation
-
10.1111/j.1365-313X.2007.03264.x, 17877703
-
Earley KW, Shook MS, Brower-Toland B, Hicks L, Pikaard CS. In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. Plant J 2007, 52:615-626. 10.1111/j.1365-313X.2007.03264.x, 17877703.
-
(2007)
Plant J
, vol.52
, pp. 615-626
-
-
Earley, K.W.1
Shook, M.S.2
Brower-Toland, B.3
Hicks, L.4
Pikaard, C.S.5
-
8
-
-
0032581751
-
Transcriptional activators direct histone acetyltransferase complexes to nucleosomes
-
10.1038/28886, 9697775
-
Utley RT, Ikeda K, Grant PA, Côté J, Steger DJ, Eberharter A, John S, Workman JL. Transcriptional activators direct histone acetyltransferase complexes to nucleosomes. Nature 1998, 394:498-502. 10.1038/28886, 9697775.
-
(1998)
Nature
, vol.394
, pp. 498-502
-
-
Utley, R.T.1
Ikeda, K.2
Grant, P.A.3
Côté, J.4
Steger, D.J.5
Eberharter, A.6
John, S.7
Workman, J.L.8
-
9
-
-
33746457753
-
Enhanced histone acetylation and transcription: a dynamic perspective
-
10.1016/j.molcel.2006.06.017, 16885019
-
Clayton AL, Hazzalin CA, Mahadevan LC. Enhanced histone acetylation and transcription: a dynamic perspective. Mol Cell 2006, 23:289-296. 10.1016/j.molcel.2006.06.017, 16885019.
-
(2006)
Mol Cell
, vol.23
, pp. 289-296
-
-
Clayton, A.L.1
Hazzalin, C.A.2
Mahadevan, L.C.3
-
10
-
-
34547924046
-
HATs and HDACs: from structure, function and regulation to novel strategies for therapy and prevention
-
10.1038/sj.onc.1210599, 17694074
-
Yang XJ, Seto E. HATs and HDACs: from structure, function and regulation to novel strategies for therapy and prevention. Oncogene 2007, 26:5310-5318. 10.1038/sj.onc.1210599, 17694074.
-
(2007)
Oncogene
, vol.26
, pp. 5310-5318
-
-
Yang, X.J.1
Seto, E.2
-
11
-
-
48249157844
-
Histone deacetylase genes in Arabidopsis development
-
10.1111/j.1744-7909.2008.00704.x, 18713398
-
Hollender C, Liu Z. Histone deacetylase genes in Arabidopsis development. J Integr Plant Biol 2008, 50:875-885. 10.1111/j.1744-7909.2008.00704.x, 18713398.
-
(2008)
J Integr Plant Biol
, vol.50
, pp. 875-885
-
-
Hollender, C.1
Liu, Z.2
-
12
-
-
13744260173
-
Reversible histone acetylation and deacetylation mediate genome-wide, promoter-dependent and locus-specific changes in gene expression during plant development
-
1448893, 15371352
-
Tian L, Fong MP, Wang JJ, Wei NE, Jiang H, Doerge RW, Chen ZJ. Reversible histone acetylation and deacetylation mediate genome-wide, promoter-dependent and locus-specific changes in gene expression during plant development. Genetics 2005, 169:337-345. 1448893, 15371352.
-
(2005)
Genetics
, vol.169
, pp. 337-345
-
-
Tian, L.1
Fong, M.P.2
Wang, J.J.3
Wei, N.E.4
Jiang, H.5
Doerge, R.W.6
Chen, Z.J.7
-
13
-
-
33947513027
-
Regulation of histone methylation by demethylimination and demethylation
-
10.1038/nrm2143, 17342184
-
Klose RJ, Zhang Y. Regulation of histone methylation by demethylimination and demethylation. Nat Rev Mol Cell Biol 2007, 8:307-318. 10.1038/nrm2143, 17342184.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 307-318
-
-
Klose, R.J.1
Zhang, Y.2
-
14
-
-
0037041422
-
Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
-
10.1038/nature731, 11898023
-
Jackson JP, Lindroth AM, Cao X, Jacobsen SE. Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature 2002, 416:556-560. 10.1038/nature731, 11898023.
-
(2002)
Nature
, vol.416
, pp. 556-560
-
-
Jackson, J.P.1
Lindroth, A.M.2
Cao, X.3
Jacobsen, S.E.4
-
15
-
-
11144354402
-
Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana
-
10.1007/s00412-004-0275-7, 15014946
-
Jackson JP, Johnson L, Jasencakova Z, Zhang X, PerezBurgos L, Singh PB, Cheng X, Schubert I, Jenuwein T, Jacobsen SE. Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana. Chromosoma 2004, 112:308-315. 10.1007/s00412-004-0275-7, 15014946.
-
(2004)
Chromosoma
, vol.112
, pp. 308-315
-
-
Jackson, J.P.1
Johnson, L.2
Jasencakova, Z.3
Zhang, X.4
PerezBurgos, L.5
Singh, P.B.6
Cheng, X.7
Schubert, I.8
Jenuwein, T.9
Jacobsen, S.E.10
-
16
-
-
17844387167
-
Pivotal role of AtSUVH2 in heterochromatic histone methylation and gene silencing in Arabidopsis
-
10.1038/sj.emboj.7600604, 1142535, 15775980
-
Naumann K, Fischer A, Hofmann I, Krauss V, Phalke S, Irmler K, Hause G, Aurich AC, Dorn R, Jenuwein T, Reuter G. Pivotal role of AtSUVH2 in heterochromatic histone methylation and gene silencing in Arabidopsis. EMBO J 2005, 24:1418-1429. 10.1038/sj.emboj.7600604, 1142535, 15775980.
-
(2005)
EMBO J
, vol.24
, pp. 1418-1429
-
-
Naumann, K.1
Fischer, A.2
Hofmann, I.3
Krauss, V.4
Phalke, S.5
Irmler, K.6
Hause, G.7
Aurich, A.C.8
Dorn, R.9
Jenuwein, T.10
Reuter, G.11
-
17
-
-
30944463788
-
Heterochromatin proteins and the control of heterochromatic gene silencing in Arabidopsis
-
10.1016/j.jplph.2005.10.015, 16384625
-
Fischer A, Hofmann I, Naumann K, Reuter G. Heterochromatin proteins and the control of heterochromatic gene silencing in Arabidopsis. J Plant Physiol 2006, 163:358-368. 10.1016/j.jplph.2005.10.015, 16384625.
-
(2006)
J Plant Physiol
, vol.163
, pp. 358-368
-
-
Fischer, A.1
Hofmann, I.2
Naumann, K.3
Reuter, G.4
-
18
-
-
33745454548
-
Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase
-
10.1105/tpc.106.041400, 1456864, 16582009
-
Ebbs ML, Bender J. Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase. Plant Cell 2006, 18:1166-1176. 10.1105/tpc.106.041400, 1456864, 16582009.
-
(2006)
Plant Cell
, vol.18
, pp. 1166-1176
-
-
Ebbs, M.L.1
Bender, J.2
-
19
-
-
69449097106
-
Diversity of Polycomb group complexes in plants: same rules, different players?
-
10.1016/j.tig.2009.07.002, 19716619
-
Hennig L, Derkacheva M. Diversity of Polycomb group complexes in plants: same rules, different players?. Trends Genet 2009, 25:414-423. 10.1016/j.tig.2009.07.002, 19716619.
-
(2009)
Trends Genet
, vol.25
, pp. 414-423
-
-
Hennig, L.1
Derkacheva, M.2
-
20
-
-
80053435772
-
Histone modifications in transcriptional activation during plant development
-
10.1016/j.bbagrm.2011.07.001, 21777708
-
Berr A, Shafiq S, Shen WH. Histone modifications in transcriptional activation during plant development. Biochim Biophys Acta 2011, 1809:567-576. 10.1016/j.bbagrm.2011.07.001, 21777708.
-
(2011)
Biochim Biophys Acta
, vol.1809
, pp. 567-576
-
-
Berr, A.1
Shafiq, S.2
Shen, W.H.3
-
21
-
-
77952500831
-
Histone methylation in higher plants
-
10.1146/annurev.arplant.043008.091939, 20192747
-
Liu C, Lu F, Cui X, Cao X. Histone methylation in higher plants. Annu Rev Plant Biol 2010, 61:395-420. 10.1146/annurev.arplant.043008.091939, 20192747.
-
(2010)
Annu Rev Plant Biol
, vol.61
, pp. 395-420
-
-
Liu, C.1
Lu, F.2
Cui, X.3
Cao, X.4
-
22
-
-
79961206886
-
SET domain proteins in plant development
-
10.1016/j.bbagrm.2011.05.008, 21664308
-
Thorstensen T, Grini PE, Aalen RB. SET domain proteins in plant development. Biochim Biophys Acta 2011, 1809:407-420. 10.1016/j.bbagrm.2011.05.008, 21664308.
-
(2011)
Biochim Biophys Acta
, vol.1809
, pp. 407-420
-
-
Thorstensen, T.1
Grini, P.E.2
Aalen, R.B.3
-
23
-
-
84860215207
-
Molecular mechanisms and potential functions of histone demethylases
-
10.1038/nrg3219, 22473470
-
Kooistra SM, Helin K. Molecular mechanisms and potential functions of histone demethylases. Nat Rev Mol Cell Biol 2012, 13:297-311. 10.1038/nrg3219, 22473470.
-
(2012)
Nat Rev Mol Cell Biol
, vol.13
, pp. 297-311
-
-
Kooistra, S.M.1
Helin, K.2
-
24
-
-
37249022362
-
Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and FLOWERING LOCUS C and thus promote the floral transition
-
10.1105/tpc.107.052373, 2174716, 17921315
-
Jiang D, Yang W, He Y, Amasino RM. Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and FLOWERING LOCUS C and thus promote the floral transition. Plant Cell 2007, 19:2975-2987. 10.1105/tpc.107.052373, 2174716, 17921315.
-
(2007)
Plant Cell
, vol.19
, pp. 2975-2987
-
-
Jiang, D.1
Yang, W.2
He, Y.3
Amasino, R.M.4
-
25
-
-
79961209798
-
Epigenetic gene regulation by plant Jumonji group of histone demethylase
-
10.1016/j.bbagrm.2011.03.004, 21419882
-
Chen X, Hu Y, Zhou DX. Epigenetic gene regulation by plant Jumonji group of histone demethylase. Biochim Biophys Acta 2011, 1809:421-426. 10.1016/j.bbagrm.2011.03.004, 21419882.
-
(2011)
Biochim Biophys Acta
, vol.1809
, pp. 421-426
-
-
Chen, X.1
Hu, Y.2
Zhou, D.X.3
-
26
-
-
79959741225
-
Arabidopsis REF6 is a histone H3 lysine 27 demethylase
-
10.1038/ng.854, 21642989
-
Lu F, Cui X, Zhang S, Jenuwein T, Cao X. Arabidopsis REF6 is a histone H3 lysine 27 demethylase. Nat Genet 2011, 43:715-719. 10.1038/ng.854, 21642989.
-
(2011)
Nat Genet
, vol.43
, pp. 715-719
-
-
Lu, F.1
Cui, X.2
Zhang, S.3
Jenuwein, T.4
Cao, X.5
-
27
-
-
11144332565
-
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
-
10.1016/j.cell.2004.12.012, 15620353
-
Shi Y, Lan F, Matson C, Mulligan P, Whetstine JR, Cole PA, Casero RA, Shi Y. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 2004, 119:941-953. 10.1016/j.cell.2004.12.012, 15620353.
-
(2004)
Cell
, vol.119
, pp. 941-953
-
-
Shi, Y.1
Lan, F.2
Matson, C.3
Mulligan, P.4
Whetstine, J.R.5
Cole, P.A.6
Casero, R.A.7
Shi, Y.8
-
28
-
-
71049163028
-
Repression of FLOWERING LOCUS T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis
-
10.1371/journal.pone.0008033, 2777508, 19946624
-
Jeong JH, Song HR, Ko JH, Jeong YM, Kwon YE, Seol JH, Amasino RM, Noh B, Noh YS. Repression of FLOWERING LOCUS T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis. PLoS One 2009, 4:e8033. 10.1371/journal.pone.0008033, 2777508, 19946624.
-
(2009)
PLoS One
, vol.4
-
-
Jeong, J.H.1
Song, H.R.2
Ko, J.H.3
Jeong, Y.M.4
Kwon, Y.E.5
Seol, J.H.6
Amasino, R.M.7
Noh, B.8
Noh, Y.S.9
-
29
-
-
77949269527
-
JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis
-
10.1038/cr.2010.27, 20177424
-
Lu F, Cui X, Zhang S, Liu C, Cao X. JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis. Cell Res 2010, 20:387-390. 10.1038/cr.2010.27, 20177424.
-
(2010)
Cell Res
, vol.20
, pp. 387-390
-
-
Lu, F.1
Cui, X.2
Zhang, S.3
Liu, C.4
Cao, X.5
-
30
-
-
35348938519
-
JMJD6 is a histone arginine demethylase
-
10.1126/science.1145801, 17947579
-
Chang B, Chen Y, Zhao Y, Bruick RK. JMJD6 is a histone arginine demethylase. Science 2007, 318:444-447. 10.1126/science.1145801, 17947579.
-
(2007)
Science
, vol.318
, pp. 444-447
-
-
Chang, B.1
Chen, Y.2
Zhao, Y.3
Bruick, R.K.4
-
31
-
-
14044250209
-
Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis
-
10.1242/dev.01595, 15634699
-
Pagnussat GC, Yu HJ, Ngo QA, Rajani S, Mayalagu S, Johnson CS, Capron A, Xie LF, Ye D, Sundaresan V. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Development 2005, 132:603-614. 10.1242/dev.01595, 15634699.
-
(2005)
Development
, vol.132
, pp. 603-614
-
-
Pagnussat, G.C.1
Yu, H.J.2
Ngo, Q.A.3
Rajani, S.4
Mayalagu, S.5
Johnson, C.S.6
Capron, A.7
Xie, L.F.8
Ye, D.9
Sundaresan, V.10
-
32
-
-
79956215355
-
JMJD5 functions in concert with TOC1 in the arabidopsis circadian system
-
10.4161/psb.6.3.14654, 3142435, 21358285
-
Jones MA, Harmer S. JMJD5 functions in concert with TOC1 in the arabidopsis circadian system. Plant Signal Behav 2011, 6:445-448. 10.4161/psb.6.3.14654, 3142435, 21358285.
-
(2011)
Plant Signal Behav
, vol.6
, pp. 445-448
-
-
Jones, M.A.1
Harmer, S.2
-
33
-
-
79958262049
-
Chromatin remodeling and the circadian clock: Jumonji C-domain containing proteins
-
10.4161/psb.6.6.15171, 3218477, 21617366
-
Lu SX, Tobin EM. Chromatin remodeling and the circadian clock: Jumonji C-domain containing proteins. Plant Signal Behav 2011, 6:810-814. 10.4161/psb.6.6.15171, 3218477, 21617366.
-
(2011)
Plant Signal Behav
, vol.6
, pp. 810-814
-
-
Lu, S.X.1
Tobin, E.M.2
-
34
-
-
84863693752
-
The tomato genome sequence provides insights into fleshy fruit evolution
-
10.1038/nature11119, 3378239, 22660326, Tomato Genome Consortium
-
Tomato Genome Consortium The tomato genome sequence provides insights into fleshy fruit evolution. Nature 2012, 485:635-641. 10.1038/nature11119, 3378239, 22660326, Tomato Genome Consortium.
-
(2012)
Nature
, vol.485
, pp. 635-641
-
-
-
35
-
-
57849113242
-
The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis
-
10.1186/1471-2229-8-12, 2268689, 18226250
-
Latrasse D, Benhamed M, Henry Y, Domenichini S, Kim W, Zhou DX, Delarue M. The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis. BMC Plant Biol 2008, 8:12. 10.1186/1471-2229-8-12, 2268689, 18226250.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 12
-
-
Latrasse, D.1
Benhamed, M.2
Henry, Y.3
Domenichini, S.4
Kim, W.5
Zhou, D.X.6
Delarue, M.7
-
36
-
-
65349085058
-
Over-expression of a tomato N-acetyl-L-glutamate synthase gene (SlNAGS1) in Arabidopsis thaliana results in high ornithine levels and increased tolerance in salt and drought stresses
-
10.1093/jxb/erp072, 2671631, 19357433
-
Kalamaki MS, Alexandrou D, Lazari D, Merkouropoulos G, Fotopoulos V, Pateraki I, Aggelis A, Carrillo-López A, Rubio-Cabetas MJ, Kanellis AK. Over-expression of a tomato N-acetyl-L-glutamate synthase gene (SlNAGS1) in Arabidopsis thaliana results in high ornithine levels and increased tolerance in salt and drought stresses. J Exp Bot 2009, 60:1859-1871. 10.1093/jxb/erp072, 2671631, 19357433.
-
(2009)
J Exp Bot
, vol.60
, pp. 1859-1871
-
-
Kalamaki, M.S.1
Alexandrou, D.2
Lazari, D.3
Merkouropoulos, G.4
Fotopoulos, V.5
Pateraki, I.6
Aggelis, A.7
Carrillo-López, A.8
Rubio-Cabetas, M.J.9
Kanellis, A.K.10
-
37
-
-
77952837863
-
Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis
-
10.1111/j.1365-313X.2010.04191.x, 20230492
-
Perrella G, Consiglio MF, Aiese-Cigliano R, Cremona G, Sanchez-Moran E, Barra L, Errico A, Bressan RA, Franklin FCH, Conicella C. Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis. Plant J 2010, 62:796-806. 10.1111/j.1365-313X.2010.04191.x, 20230492.
-
(2010)
Plant J
, vol.62
, pp. 796-806
-
-
Perrella, G.1
Consiglio, M.F.2
Aiese-Cigliano, R.3
Cremona, G.4
Sanchez-Moran, E.5
Barra, L.6
Errico, A.7
Bressan, R.A.8
Franklin, F.C.H.9
Conicella, C.10
-
38
-
-
77955142258
-
Histone acetyltransferase AtGCN5/HAG1 is a versatile regulator of developmental and inducible gene expression in Arabidopsis
-
10.1093/mp/ssq018, 20457643
-
Servet C, Conde E, Silva N, Zhou DX. Histone acetyltransferase AtGCN5/HAG1 is a versatile regulator of developmental and inducible gene expression in Arabidopsis. Mol Plant 2010, 3:670-677. 10.1093/mp/ssq018, 20457643.
-
(2010)
Mol Plant
, vol.3
, pp. 670-677
-
-
Servet, C.1
Conde, E.2
Silva, N.3
Zhou, D.X.4
-
39
-
-
21144446261
-
The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth
-
10.1073/pnas.0502600102, 1140448, 15894610
-
Nelissen H, Fleury D, Bruno L, Robles P, De Veylder L, Traas J, Micol JL, Van Montagu M, Inzé D, Van Lijsebettens M. The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth. Proc Natl Acad Sci USA 2005, 102:7754-7759. 10.1073/pnas.0502600102, 1140448, 15894610.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7754-7759
-
-
Nelissen, H.1
Fleury, D.2
Bruno, L.3
Robles, P.4
De Veylder, L.5
Traas, J.6
Micol, J.L.7
Van Montagu, M.8
Inzé, D.9
Van Lijsebettens, M.10
-
40
-
-
76549105500
-
Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation
-
10.1073/pnas.0913559107, 2824411, 20080602
-
Nelissen H, De Groeve S, Fleury D, Neyt P, Bruno L, Bitonti MB, Vandenbussche F, Van der Straeten D, Yamaguchi T, Tsukaya H, Witters E, De Jaeger G, Houben A, Van Lijsebettens M. Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation. Proc Natl Acad Sci USA 2010, 107:1678-1683. 10.1073/pnas.0913559107, 2824411, 20080602.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 1678-1683
-
-
Nelissen, H.1
De Groeve, S.2
Fleury, D.3
Neyt, P.4
Bruno, L.5
Bitonti, M.B.6
Vandenbussche, F.7
Van der Straeten, D.8
Yamaguchi, T.9
Tsukaya, H.10
Witters, E.11
De Jaeger, G.12
Houben, A.13
Van Lijsebettens, M.14
-
41
-
-
80051778814
-
Asymmetric leaves2 and Elongator, a histone acetyltransferase complex, mediate the establishment of polarity in leaves of Arabidopsis thaliana
-
10.1093/pcp/pcr083, 21700721
-
Kojima S, Iwasaki M, Takahashi H, Imai T, Matsumura Y, Fleury D, Van Lijsebettens M, Machida Y, Machida C. Asymmetric leaves2 and Elongator, a histone acetyltransferase complex, mediate the establishment of polarity in leaves of Arabidopsis thaliana. Plant Cell Physiol 2011, 52:1259-1273. 10.1093/pcp/pcr083, 21700721.
-
(2011)
Plant Cell Physiol
, vol.52
, pp. 1259-1273
-
-
Kojima, S.1
Iwasaki, M.2
Takahashi, H.3
Imai, T.4
Matsumura, Y.5
Fleury, D.6
Van Lijsebettens, M.7
Machida, Y.8
Machida, C.9
-
42
-
-
33845646899
-
Role of plant CBP/p300-like genes in the regulation of flowering time
-
Han SK, Song JD, Noh YS, Noh B. Role of plant CBP/p300-like genes in the regulation of flowering time. Plant J 2007, 49:103-114.
-
(2007)
Plant J
, vol.49
, pp. 103-114
-
-
Han, S.K.1
Song, J.D.2
Noh, Y.S.3
Noh, B.4
-
43
-
-
34249814619
-
Involvement of the histone acetyltransferase AtHAC1 in the regulation of flowering time via repression of FLOWERING LOCUS C in Arabidopsis
-
10.1104/pp.107.095521, 1851829, 17416640
-
Deng W, Liu C, Pei Y, Deng X, Niu L, Cao X. Involvement of the histone acetyltransferase AtHAC1 in the regulation of flowering time via repression of FLOWERING LOCUS C in Arabidopsis. Plant Physiol 2007, 143:1660-1668. 10.1104/pp.107.095521, 1851829, 17416640.
-
(2007)
Plant Physiol
, vol.143
, pp. 1660-1668
-
-
Deng, W.1
Liu, C.2
Pei, Y.3
Deng, X.4
Niu, L.5
Cao, X.6
-
44
-
-
65349160381
-
Phylogenetic analysis, subcellular localization, and expression patterns of RPD3/HDAI family histone deacetylases in plants
-
10.1186/1471-2229-9-37, 2671507, 19327164
-
Alisung MV, Yu CW, Wu K. Phylogenetic analysis, subcellular localization, and expression patterns of RPD3/HDAI family histone deacetylases in plants. BMC Plant Biol 2009, 9:37. 10.1186/1471-2229-9-37, 2671507, 19327164.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 37
-
-
Alisung, M.V.1
Yu, C.W.2
Wu, K.3
-
45
-
-
26444535243
-
Histone acetylation affects expression of cellular patterning genes in the Arabidopsis root epidermis
-
10.1073/pnas.0503143102, 1242287, 16176989
-
Xu CR, Liu C, Wang YL, Li LC, Chen WQ, Xu ZH, Bai SN. Histone acetylation affects expression of cellular patterning genes in the Arabidopsis root epidermis. Proc Natl Acad Sci USA 2005, 102:14469-14474. 10.1073/pnas.0503143102, 1242287, 16176989.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14469-14474
-
-
Xu, C.R.1
Liu, C.2
Wang, Y.L.3
Li, L.C.4
Chen, W.Q.5
Xu, Z.H.6
Bai, S.N.7
-
46
-
-
40749154400
-
The Arabidopsis histone deacetylases HDA6 and HDA19 contribute to the repression of embryonic properties after germination
-
2230551, 18024558
-
Tanaka M, Kikuchi A, Kamada H. The Arabidopsis histone deacetylases HDA6 and HDA19 contribute to the repression of embryonic properties after germination. Plant Physiol 2008, 146:149-161. 2230551, 18024558.
-
(2008)
Plant Physiol
, vol.146
, pp. 149-161
-
-
Tanaka, M.1
Kikuchi, A.2
Kamada, H.3
-
47
-
-
33744992478
-
TOPLESS regulates apical embryonic fate in Arabidopsis
-
10.1126/science.1123841, 16763149
-
Long JA, Ohno C, Smith ZR, Meyerowitz EM. TOPLESS regulates apical embryonic fate in Arabidopsis. Science 2006, 312:1520-1523. 10.1126/science.1123841, 16763149.
-
(2006)
Science
, vol.312
, pp. 1520-1523
-
-
Long, J.A.1
Ohno, C.2
Smith, Z.R.3
Meyerowitz, E.M.4
-
48
-
-
68449104035
-
Histone acetylation, VERNALIZATION INSENSITIVE 3, FLOWERING LOCUS C, and the vernalization response
-
10.1093/mp/ssp021, 19825652
-
Bond DM, Dennis ES, Pogson BJ, Finnegan EJ. Histone acetylation, VERNALIZATION INSENSITIVE 3, FLOWERING LOCUS C, and the vernalization response. Mol Plant 2009, 2:724-737. 10.1093/mp/ssp021, 19825652.
-
(2009)
Mol Plant
, vol.2
, pp. 724-737
-
-
Bond, D.M.1
Dennis, E.S.2
Pogson, B.J.3
Finnegan, E.J.4
-
49
-
-
0038459131
-
Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots
-
10.1104/pp.102.013722, 167030, 12805620
-
Springer NM, Napoli CA, Selinger DA, Pandey R, Cone KC, Chandler VL, Kaeppler HF, Kaeppler SM. Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots. Plant Physiol 2003, 132:907-925. 10.1104/pp.102.013722, 167030, 12805620.
-
(2003)
Plant Physiol
, vol.132
, pp. 907-925
-
-
Springer, N.M.1
Napoli, C.A.2
Selinger, D.A.3
Pandey, R.4
Cone, K.C.5
Chandler, V.L.6
Kaeppler, H.F.7
Kaeppler, S.M.8
-
50
-
-
79957930595
-
Phylogenetic Analysis of SET Domain in Trithorax SlTX1 of Solanum lycopersicum
-
Sadder M, Alsadon A, Al-Thamra M, Zakri A, Al-Doss A. Phylogenetic Analysis of SET Domain in Trithorax SlTX1 of Solanum lycopersicum. Plant Omics 2011, 4:95.
-
(2011)
Plant Omics
, vol.4
, pp. 95
-
-
Sadder, M.1
Alsadon, A.2
Al-Thamra, M.3
Zakri, A.4
Al-Doss, A.5
-
51
-
-
16244362244
-
A gene expression map of Arabidopsis thaliana development
-
10.1038/ng1543, 15806101
-
Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Schölkopf B, Weigel D, Lohmann JU. A gene expression map of Arabidopsis thaliana development. Nature Genet 2005, 37:501-506. 10.1038/ng1543, 15806101.
-
(2005)
Nature Genet
, vol.37
, pp. 501-506
-
-
Schmid, M.1
Davison, T.S.2
Henz, S.R.3
Pape, U.J.4
Demar, M.5
Vingron, M.6
Schölkopf, B.7
Weigel, D.8
Lohmann, J.U.9
-
52
-
-
62549103817
-
Regulation of carotenoid composition and shoot branching in Arabidopsis by a chromatin modifying histone methyltransferase, SDG8
-
10.1105/tpc.108.063131, 2648095, 19174535
-
Cazzonelli CI, Cuttriss AJ, Cossetto SB, Pye W, Crisp P, Whelan J, Finnegan EJ, Turnbull C, Pogson BJ. Regulation of carotenoid composition and shoot branching in Arabidopsis by a chromatin modifying histone methyltransferase, SDG8. Plant Cell 2009, 21:39-53. 10.1105/tpc.108.063131, 2648095, 19174535.
-
(2009)
Plant Cell
, vol.21
, pp. 39-53
-
-
Cazzonelli, C.I.1
Cuttriss, A.J.2
Cossetto, S.B.3
Pye, W.4
Crisp, P.5
Whelan, J.6
Finnegan, E.J.7
Turnbull, C.8
Pogson, B.J.9
-
53
-
-
39949084673
-
The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen
-
10.1016/j.ydbio.2007.12.016, 18252252
-
Cartagena JA, Matsunaga S, Seki M, Kurihara D, Yokoyama M, Shinozaki K, Fujimoto S, Azumi Y, Uchiyama S, Fukui K. The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen. Dev Biol 2008, 315:355-368. 10.1016/j.ydbio.2007.12.016, 18252252.
-
(2008)
Dev Biol
, vol.315
, pp. 355-368
-
-
Cartagena, J.A.1
Matsunaga, S.2
Seki, M.3
Kurihara, D.4
Yokoyama, M.5
Shinozaki, K.6
Fujimoto, S.7
Azumi, Y.8
Uchiyama, S.9
Fukui, K.10
-
54
-
-
78649509747
-
Arabidopsis SET DOMAIN GROUP2 is required for H3K4 trimethylation and is crucial for both sporophyte and gametophyte development
-
10.1105/tpc.110.079962, 2990135, 21037105
-
Berr A, McCallum EJ, Ménard R, Meyer D, Fuchs J, Dong A, Shen WH. Arabidopsis SET DOMAIN GROUP2 is required for H3K4 trimethylation and is crucial for both sporophyte and gametophyte development. Plant Cell 2010, 22:3232-3248. 10.1105/tpc.110.079962, 2990135, 21037105.
-
(2010)
Plant Cell
, vol.22
, pp. 3232-3248
-
-
Berr, A.1
McCallum, E.J.2
Ménard, R.3
Meyer, D.4
Fuchs, J.5
Dong, A.6
Shen, W.H.7
-
55
-
-
78649811780
-
SET DOMAIN GROUP2 is the major histone H3 lysine 4 trimethyltransferase in Arabidopsis
-
10.1073/pnas.1010478107, 2972934, 20937886
-
Guo L, Yu Y, Law JA, Zhang X. SET DOMAIN GROUP2 is the major histone H3 lysine 4 trimethyltransferase in Arabidopsis. Proc Natl Acad Sci USA 2010, 107:18557-18562. 10.1073/pnas.1010478107, 2972934, 20937886.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 18557-18562
-
-
Guo, L.1
Yu, Y.2
Law, J.A.3
Zhang, X.4
-
56
-
-
66149184101
-
Wall-modifying genes regulated by the Arabidopsis homolog of trithorax, ATX1: repression of the XTH33 gene as a test case
-
10.1111/j.1365-313X.2009.03798.x, 19154201
-
Ndamukong I, Chetram A, Saleh A, Avramova Z. Wall-modifying genes regulated by the Arabidopsis homolog of trithorax, ATX1: repression of the XTH33 gene as a test case. Plant J 2009, 58:541-553. 10.1111/j.1365-313X.2009.03798.x, 19154201.
-
(2009)
Plant J
, vol.58
, pp. 541-553
-
-
Ndamukong, I.1
Chetram, A.2
Saleh, A.3
Avramova, Z.4
-
57
-
-
0029310564
-
Characterisation of two tomato fruit-expressed cDNAs encoding xyloglucan endo-transglycosylase
-
10.1007/BF00020389, 7632911
-
Arrowsmith DA, de Silva J. Characterisation of two tomato fruit-expressed cDNAs encoding xyloglucan endo-transglycosylase. Plant Mol Biol 1995, 28:391-403. 10.1007/BF00020389, 7632911.
-
(1995)
Plant Mol Biol
, vol.28
, pp. 391-403
-
-
Arrowsmith, D.A.1
de Silva, J.2
-
58
-
-
70350660532
-
SET DOMAIN GROUP25 encodes a histone methyltransferase and is involved in FLOWERING LOCUS C activation and repression of flowering
-
10.1104/pp.109.143941, 2773071, 19726574
-
Berr A, Xu L, Gao J, Cognat V, Steinmetz A, Dong A, Shen WH. SET DOMAIN GROUP25 encodes a histone methyltransferase and is involved in FLOWERING LOCUS C activation and repression of flowering. Plant Physiol 2009, 151:1476-1485. 10.1104/pp.109.143941, 2773071, 19726574.
-
(2009)
Plant Physiol
, vol.151
, pp. 1476-1485
-
-
Berr, A.1
Xu, L.2
Gao, J.3
Cognat, V.4
Steinmetz, A.5
Dong, A.6
Shen, W.H.7
-
59
-
-
33845896853
-
Protein arginine methyltransferases: evolution and assessment of their pharmacological and therapeutic potential
-
10.1016/j.pharmthera.2006.06.007, 17005254
-
Krause CD, Yang ZH, Kim YS, Lee JH, Cook JR, Pestka S. Protein arginine methyltransferases: evolution and assessment of their pharmacological and therapeutic potential. Pharmacol Ther 2007, 113:50-87. 10.1016/j.pharmthera.2006.06.007, 17005254.
-
(2007)
Pharmacol Ther
, vol.113
, pp. 50-87
-
-
Krause, C.D.1
Yang, Z.H.2
Kim, Y.S.3
Lee, J.H.4
Cook, J.R.5
Pestka, S.6
-
60
-
-
36348965898
-
Identification and characterization of two closely related histone H4 arginine 3 methyltransferases in Arabidopsis thaliana
-
10.1042/BJ20070786, 2049078, 17666011
-
Yan D, Zhang Y, Niu L, Yuan Y, Cao X. Identification and characterization of two closely related histone H4 arginine 3 methyltransferases in Arabidopsis thaliana. Biochem J 2007, 408:113-121. 10.1042/BJ20070786, 2049078, 17666011.
-
(2007)
Biochem J
, vol.408
, pp. 113-121
-
-
Yan, D.1
Zhang, Y.2
Niu, L.3
Yuan, Y.4
Cao, X.5
-
61
-
-
35148851963
-
PRMT11: a new Arabidopsis MBD7 protein partner with arginine methyltransferase activity
-
10.1111/j.1365-313X.2007.03238.x, 17711414
-
Scebba F, De Bastiani M, Bernacchia G, Andreucci A, Galli A, Pitto L. PRMT11: a new Arabidopsis MBD7 protein partner with arginine methyltransferase activity. Plant J 2007, 52:210-222. 10.1111/j.1365-313X.2007.03238.x, 17711414.
-
(2007)
Plant J
, vol.52
, pp. 210-222
-
-
Scebba, F.1
De Bastiani, M.2
Bernacchia, G.3
Andreucci, A.4
Galli, A.5
Pitto, L.6
-
62
-
-
36749068882
-
Regulation of flowering time by the protein arginine methyltransferase AtPRMT10
-
10.1038/sj.embor.7401111, 2267234, 18007657
-
Niu L, Lu F, Pei Y, Liu C, Cao X. Regulation of flowering time by the protein arginine methyltransferase AtPRMT10. EMBO Rep 2007, 8:1190-1195. 10.1038/sj.embor.7401111, 2267234, 18007657.
-
(2007)
EMBO Rep
, vol.8
, pp. 1190-1195
-
-
Niu, L.1
Lu, F.2
Pei, Y.3
Liu, C.4
Cao, X.5
-
63
-
-
55549123195
-
Redundant requirement for a pair of PROTEIN ARGININE METHYLTRANSFERASE4 homologs for the proper regulation of Arabidopsis flowering time
-
10.1104/pp.108.124727, 2528109, 18660432
-
Niu L, Zhang Y, Pei Y, Liu C, Cao X. Redundant requirement for a pair of PROTEIN ARGININE METHYLTRANSFERASE4 homologs for the proper regulation of Arabidopsis flowering time. Plant Physiol 2008, 148:490-503. 10.1104/pp.108.124727, 2528109, 18660432.
-
(2008)
Plant Physiol
, vol.148
, pp. 490-503
-
-
Niu, L.1
Zhang, Y.2
Pei, Y.3
Liu, C.4
Cao, X.5
-
64
-
-
34547881914
-
Mutations in the Type II protein arginine methyltransferase AtPRMT5 result in pleiotropic developmental defects in Arabidopsis
-
10.1104/pp.107.099531, 1949897, 17573539
-
Pei Y, Niu L, Lu F, Liu C, Zhai J, Kong X, Cao X. Mutations in the Type II protein arginine methyltransferase AtPRMT5 result in pleiotropic developmental defects in Arabidopsis. Plant Physiol 2007, 144:1913-1923. 10.1104/pp.107.099531, 1949897, 17573539.
-
(2007)
Plant Physiol
, vol.144
, pp. 1913-1923
-
-
Pei, Y.1
Niu, L.2
Lu, F.3
Liu, C.4
Zhai, J.5
Kong, X.6
Cao, X.7
-
65
-
-
79952288503
-
Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mRNA splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation
-
10.1105/tpc.110.081356, 3051234, 21258002
-
Zhang Z, Zhang S, Zhang Y, Wang X, Li D, Li Q, Yue M, Li Q, Zhang YE, Xu Y, Xue Y, Chong K, Bao S. Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mRNA splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation. Plant Cell 2011, 23:396-411. 10.1105/tpc.110.081356, 3051234, 21258002.
-
(2011)
Plant Cell
, vol.23
, pp. 396-411
-
-
Zhang, Z.1
Zhang, S.2
Zhang, Y.3
Wang, X.4
Li, D.5
Li, Q.6
Yue, M.7
Li, Q.8
Zhang, Y.E.9
Xu, Y.10
Xue, Y.11
Chong, K.12
Bao, S.13
-
66
-
-
33846907165
-
C2H2 zinc finger-SET histone methyltransferase is a plant-specific chromatin modifier
-
10.1016/j.ydbio.2006.11.012, 1831845, 17224141
-
Krichevsky A, Gutgarts H, Kozlovsky SV, Tzfira T, Sutton A, Sternglanz R, Mandel G, Citovsky V. C2H2 zinc finger-SET histone methyltransferase is a plant-specific chromatin modifier. Dev Biol 2007, 303:259-269. 10.1016/j.ydbio.2006.11.012, 1831845, 17224141.
-
(2007)
Dev Biol
, vol.303
, pp. 259-269
-
-
Krichevsky, A.1
Gutgarts, H.2
Kozlovsky, S.V.3
Tzfira, T.4
Sutton, A.5
Sternglanz, R.6
Mandel, G.7
Citovsky, V.8
-
67
-
-
57749191494
-
Regulation of Root Elongation by Histone Acetylation in Arabidopsis
-
10.1016/j.jmb.2008.09.040, 2650830, 18835563
-
Krichevsky A, Zaltsman A, Kozlovsky SV, Tian GW, Citovsky V. Regulation of Root Elongation by Histone Acetylation in Arabidopsis. J Mol Biol 2009, 385:45-50. 10.1016/j.jmb.2008.09.040, 2650830, 18835563.
-
(2009)
J Mol Biol
, vol.385
, pp. 45-50
-
-
Krichevsky, A.1
Zaltsman, A.2
Kozlovsky, S.V.3
Tian, G.W.4
Citovsky, V.5
-
68
-
-
48249088454
-
Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice
-
10.1111/j.1744-7909.2008.00692.x, 18713399
-
Lu F, Li G, Cui X, Liu C, Wang XJ, Cao X. Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice. J Integr Plant Biol 2008, 50:886-896. 10.1111/j.1744-7909.2008.00692.x, 18713399.
-
(2008)
J Integr Plant Biol
, vol.50
, pp. 886-896
-
-
Lu, F.1
Li, G.2
Cui, X.3
Liu, C.4
Wang, X.J.5
Cao, X.6
-
69
-
-
16444370435
-
Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time
-
10.1105/tpc.104.025353, 520958, 15377760
-
Noh B, Lee SH, Kim HJ, Yi G, Shin EA, Lee M, Jung KJ, Doyle MR, Amasino RM, Noh YS. Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time. Plant Cell 2004, 16:2601-2613. 10.1105/tpc.104.025353, 520958, 15377760.
-
(2004)
Plant Cell
, vol.16
, pp. 2601-2613
-
-
Noh, B.1
Lee, S.H.2
Kim, H.J.3
Yi, G.4
Shin, E.A.5
Lee, M.6
Jung, K.J.7
Doyle, M.R.8
Amasino, R.M.9
Noh, Y.S.10
-
70
-
-
14844355911
-
Analysis in vitro of the enzyme CRTISO establishes a poly-cis-carotenoid biosynthesis pathway in plants
-
10.1104/pp.104.052092, 535854, 15557094
-
Isaacson T, Ohad I, Beyer P, Hirschberg J. Analysis in vitro of the enzyme CRTISO establishes a poly-cis-carotenoid biosynthesis pathway in plants. Plant Physiol 2004, 136:4246-4255. 10.1104/pp.104.052092, 535854, 15557094.
-
(2004)
Plant Physiol
, vol.136
, pp. 4246-4255
-
-
Isaacson, T.1
Ohad, I.2
Beyer, P.3
Hirschberg, J.4
-
71
-
-
2942664982
-
There is more to tomato fruit colour than candidate carotenoid genes
-
10.1046/j.1467-7652.2003.00018.x, 17156032
-
Liu YS, Gur A, Ronen G, Causse M, Damidaux R, Buret M, Hirschberg J, Zamir D. There is more to tomato fruit colour than candidate carotenoid genes. Plant Biotechnol J 2003, 1:195-207. 10.1046/j.1467-7652.2003.00018.x, 17156032.
-
(2003)
Plant Biotechnol J
, vol.1
, pp. 195-207
-
-
Liu, Y.S.1
Gur, A.2
Ronen, G.3
Causse, M.4
Damidaux, R.5
Buret, M.6
Hirschberg, J.7
Zamir, D.8
-
72
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
73
-
-
13244255415
-
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
-
10.1186/1471-2105-5-113, 517706, 15318951
-
Edgar RC. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 2004, 5:113. 10.1186/1471-2105-5-113, 517706, 15318951.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
74
-
-
79959931985
-
HMMER web server: interactive sequence similarity searching
-
10.1093/nar/gkr367, 3125773, 21593126
-
Finn RD, Clements J, Eddy SR. HMMER web server: interactive sequence similarity searching. Nucleic Acids Res 2011, 39:W29-W37. 10.1093/nar/gkr367, 3125773, 21593126.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Finn, R.D.1
Clements, J.2
Eddy, S.R.3
-
75
-
-
0032568655
-
SMART, a simple modular architecture research tool: identification of signaling domains
-
10.1073/pnas.95.11.5857, 34487, 9600884
-
Schultz J, Milpetz F, Bork P, Ponting CP. SMART, a simple modular architecture research tool: identification of signaling domains. Proc Natl Acad Sci USA 1998, 95:5857-5864. 10.1073/pnas.95.11.5857, 34487, 9600884.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 5857-5864
-
-
Schultz, J.1
Milpetz, F.2
Bork, P.3
Ponting, C.P.4
-
76
-
-
48249102000
-
Phylogeny fr: robust phylogenetic analysis for the non-specialist
-
10.1093/nar/gkn180, 2447785, 18424797
-
Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, Dufayard JF, Guindon S, Lefort V, Lescot M, Claverie JM, Gascuel O. Phylogeny fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res 2008, 36:W465-W469. 10.1093/nar/gkn180, 2447785, 18424797.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Dereeper, A.1
Guignon, V.2
Blanc, G.3
Audic, S.4
Buffet, S.5
Chevenet, F.6
Dufayard, J.F.7
Guindon, S.8
Lefort, V.9
Lescot, M.10
Claverie, J.M.11
Gascuel, O.12
-
77
-
-
0000461280
-
Confidence limits on phylogenies: an approach using the bootstrap
-
Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
78
-
-
0037314097
-
Matrix2png: a utility for visualizing matrix data
-
10.1093/bioinformatics/19.2.295, 12538257
-
Pavlidis P, Noble WS. Matrix2png: a utility for visualizing matrix data. Bioinformatics 2003, 19:295-296. 10.1093/bioinformatics/19.2.295, 12538257.
-
(2003)
Bioinformatics
, vol.19
, pp. 295-296
-
-
Pavlidis, P.1
Noble, W.S.2
-
79
-
-
0037311919
-
TM4: a free, open-source system for microarray data management and analysis
-
Saeed AI, Sharov V, White J, Li J, Liang W, Bhagabati N, Braisted J, Klapa M, Currier T, Thiagarajan M, Sturn A, Snuffin M, Rezantsev A, Popov D, Ryltsov A, Kostukovich E, Borisovsky I, Liu Z, Vinsavich A, Trush V, Quackenbush J. TM4: a free, open-source system for microarray data management and analysis. Biotechniques 2003, 34:374-378.
-
(2003)
Biotechniques
, vol.34
, pp. 374-378
-
-
Saeed, A.I.1
Sharov, V.2
White, J.3
Li, J.4
Liang, W.5
Bhagabati, N.6
Braisted, J.7
Klapa, M.8
Currier, T.9
Thiagarajan, M.10
Sturn, A.11
Snuffin, M.12
Rezantsev, A.13
Popov, D.14
Ryltsov, A.15
Kostukovich, E.16
Borisovsky, I.17
Liu, Z.18
Vinsavich, A.19
Trush, V.20
Quackenbush, J.21
more..
-
80
-
-
33747894577
-
TM4 microarray software suite
-
Saeed AI, Bhagabati NK, Braisted JC, Liang W, Sharov V, Howe EA, Li J, Thiagarajan M, White JA, Quackenbush J. TM4 microarray software suite. Methods Enzymol 2006, 411:134-193.
-
(2006)
Methods Enzymol
, vol.411
, pp. 134-193
-
-
Saeed, A.I.1
Bhagabati, N.K.2
Braisted, J.C.3
Liang, W.4
Sharov, V.5
Howe, E.A.6
Li, J.7
Thiagarajan, M.8
White, J.A.9
Quackenbush, J.10
-
81
-
-
34249770724
-
A genomic library of Lycopersicon pennellii in L. esculentum: a tool for fine mapping of genes
-
Eshed Y, Zamir D. A genomic library of Lycopersicon pennellii in L. esculentum: a tool for fine mapping of genes. Euphytica 1994, 79:175-179.
-
(1994)
Euphytica
, vol.79
, pp. 175-179
-
-
Eshed, Y.1
Zamir, D.2
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