메뉴 건너뛰기




Volumn 45, Issue 11, 2013, Pages 1327-1338

Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters

Author keywords

[No Author keywords available]

Indexed keywords

DNA; HISTONE H2AZ; HISTONE H3; RAD51 PROTEIN; RNA;

EID: 84887106752     PISSN: 10614036     EISSN: 15461718     Source Type: Journal    
DOI: 10.1038/ng.2766     Document Type: Article
Times cited : (263)

References (95)
  • 1
    • 3042742130 scopus 로고    scopus 로고
    • Where the crossovers are: Recombination distributions in mammals
    • Kauppi, L., Jeffreys, A.J. & Keeney, S. Where the crossovers are: Recombination distributions in mammals. Nat. Rev. Genet. 5, 413-424 (2004
    • (2004) Nat. Rev. Genet , vol.5 , pp. 413-424
    • Kauppi, L.1    Jeffreys, A.J.2    Keeney, S.3
  • 2
    • 2142773942 scopus 로고    scopus 로고
    • The fine-scale structure of recombination rate variation in the human genome
    • McVean, G.A.T. et al. The fine-scale structure of recombination rate variation in the human genome. Science 304, 581-584 (2004
    • (2004) Science , vol.304 , pp. 581-584
    • McVean, G.A.T.1
  • 3
    • 79952295560 scopus 로고    scopus 로고
    • A hierarchical combination of factors shapes the genome-wide topography of yeast meiotic recombination initiation
    • Pan, J. et al. A hierarchical combination of factors shapes the genome-wide topography of yeast meiotic recombination initiation. Cell 144, 719-731 (2011
    • (2011) Cell , vol.144 , pp. 719-731
    • Pan, J.1
  • 4
    • 76749170346 scopus 로고    scopus 로고
    • PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice
    • Baudat, F. et al. PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. Science 327, 836-840 (2010
    • (2010) Science , vol.327 , pp. 836-840
    • Baudat, F.1
  • 5
    • 76749155072 scopus 로고    scopus 로고
    • Drive against hotspot motifs in primates implicates the PRDM9 gene in meiotic recombination
    • Myers, S. et al. Drive against hotspot motifs in primates implicates the PRDM9 gene in meiotic recombination. Science 327, 876-879 (2010
    • (2010) Science , vol.327 , pp. 876-879
    • Myers, S.1
  • 6
    • 79961097286 scopus 로고    scopus 로고
    • Variants of the protein PRDM9 differentially regulate a set of human meiotic recombination hotspots highly active in African populations
    • Berg, I.L. et al. Variants of the protein PRDM9 differentially regulate a set of human meiotic recombination hotspots highly active in African populations. Proc. Natl. Acad. Sci. USA 108, 12378-12383 (2011
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 12378-12383
    • Berg, I.L.1
  • 7
    • 77957579303 scopus 로고    scopus 로고
    • PRDM9 variation strongly influences recombination hot spot activity and meiotic instability in humans
    • Berg, I.L. et al. PRDM9 variation strongly influences recombination hot spot activity and meiotic instability in humans. Nat. Genet. 42, 859-863 (2010
    • (2010) Nat. Genet , vol.42 , pp. 859-863
    • Berg, I.L.1
  • 8
    • 80051679387 scopus 로고    scopus 로고
    • The landscape of recombination in African Americans
    • Hinch, A.G. et al. The landscape of recombination in African Americans. Nature 476, 170-175 (2011
    • (2011) Nature , vol.476 , pp. 170-175
    • Hinch, A.G.1
  • 9
    • 78049354879 scopus 로고    scopus 로고
    • Fine-scale recombination rate differences between sexes, populations and individuals
    • Kong, A. et al. Fine-scale recombination rate differences between sexes, populations and individuals. Nature 467, 1099-1103 (2010
    • (2010) Nature , vol.467 , pp. 1099-1103
    • Kong, A.1
  • 10
    • 76749151934 scopus 로고    scopus 로고
    • Prdm9 controls activation of mammalian recombination hotspots
    • Parvanov, E.D., Petkov, P.M. & Paigen, K. Prdm9 controls activation of mammalian recombination hotspots. Science 327, 835 (2010
    • (2010) Science , vol.327 , pp. 835
    • Parvanov, E.D.1    Petkov, P.M.2    Paigen, K.3
  • 11
    • 79955480674 scopus 로고    scopus 로고
    • Genome-wide analysis reveals novel molecular features of mouse recombination hotspots
    • Smagulova, F. et al. Genome-wide analysis reveals novel molecular features of mouse recombination hotspots. Nature 472, 375-378 (2011
    • (2011) Nature , vol.472 , pp. 375-378
    • Smagulova, F.1
  • 12
    • 26844482093 scopus 로고    scopus 로고
    • A fine-scale map of recombination rates and hotspots across the human genome
    • Myers, S., Bottolo, L., Freeman, C., McVean, G. & Donnelly, P. A fine-scale map of recombination rates and hotspots across the human genome. Science 310, 321-324 (2005
    • (2005) Science , vol.310 , pp. 321-324
    • Myers, S.1    Bottolo, L.2    Freeman, C.3    McVean, G.4    Donnelly, P.5
  • 13
    • 27844440989 scopus 로고    scopus 로고
    • A histone H3 methyltransferase controls epigenetic events required for meiotic prophase
    • Hayashi, K., Yoshida, K. & Matsui, Y. A histone H3 methyltransferase controls epigenetic events required for meiotic prophase. Nature 438, 374-378 (2005
    • (2005) Nature , vol.438 , pp. 374-378
    • Hayashi, K.1    Yoshida, K.2    Matsui, Y.3
  • 14
    • 80055056367 scopus 로고    scopus 로고
    • Mouse PRDM9 DNA-binding specificity determines sites of histone H3 lysine 4 trimethylation for initiation of meiotic recombination
    • Grey, C. et al. Mouse PRDM9 DNA-binding specificity determines sites of histone H3 lysine 4 trimethylation for initiation of meiotic recombination. PLoS Biol. 9, e1001176 (2011
    • (2011) PLoS Biol , vol.9
    • Grey, C.1
  • 15
    • 84863770992 scopus 로고    scopus 로고
    • Genetic recombination is directed away from functional genomic elements in mice
    • Brick, K., Smagulova, F., Khil, P., Camerini-Otero, R.D. & Petukhova, G.V. Genetic recombination is directed away from functional genomic elements in mice. Nature 485, 642-645 (2012
    • (2012) Nature , vol.485 , pp. 642-645
    • Brick, K.1    Smagulova, F.2    Khil, P.3    Camerini-Otero, R.D.4    Petukhova, G.V.5
  • 16
    • 0027938045 scopus 로고
    • Changes in chromatin structure at recombination initiation sites during yeast meiosis
    • Ohta, K., Shibata, T. & Nicolas, A. Changes in chromatin structure at recombination initiation sites during yeast meiosis. EMBO J. 13, 5754-5763 (1994
    • (1994) EMBO J. , vol.13 , pp. 5754-5763
    • Ohta, K.1    Shibata, T.2    Nicolas, A.3
  • 17
    • 0028206864 scopus 로고
    • Meiosis-induced double-strand break sites determined by yeast chromatin structure
    • Wu, T.C. & Lichten, M. Meiosis-induced double-strand break sites determined by yeast chromatin structure. Science 263, 515-518 (1994
    • (1994) Science , vol.263 , pp. 515-518
    • Wu, T.C.1    Lichten, M.2
  • 18
    • 0029862606 scopus 로고    scopus 로고
    • Relationship between nuclease-hypersensitive sites and meiotic recombination hot spot activity at the HIS4 locus of Saccharomyces cerevisiae
    • Fan, Q.Q. & Petes, T.D. Relationship between nuclease-hypersensitive sites and meiotic recombination hot spot activity at the HIS4 locus of Saccharomyces cerevisiae. Mol. Cell. Biol. 16, 2037-2043 (1996
    • (1996) Mol. Cell. Biol , vol.16 , pp. 2037-2043
    • Fan, Q.Q.1    Petes, T.D.2
  • 19
    • 0024476859 scopus 로고
    • An initiation site for meiotic gene conversion in the yeast Saccharomyces cerevisiae
    • Nicolas, A., Treco, D., Schultes, N.P. & Szostak, J.W. An initiation site for meiotic gene conversion in the yeast Saccharomyces cerevisiae. Nature 338, 35-39 (1989
    • (1989) Nature , vol.338 , pp. 35-39
    • Nicolas, A.1    Treco, D.2    Schultes, N.P.3    Szostak, J.W.4
  • 20
    • 0031010660 scopus 로고    scopus 로고
    • Clustering of meiotic double-strand breaks on yeast chromosome III
    • Baudat, F. & Nicolas, A. Clustering of meiotic double-strand breaks on yeast chromosome III. Proc. Natl. Acad. Sci. USA 94, 5213-5218 (1997
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 5213-5218
    • Baudat, F.1    Nicolas, A.2
  • 21
    • 73249131172 scopus 로고    scopus 로고
    • A positive but complex association between meiotic double-strand break hotspots and open chromatin in Saccharomyces cerevisiae
    • Berchowitz, L.E., Hanlon, S.E., Lieb, J.D. & Copenhaver, G.P. A positive but complex association between meiotic double-strand break hotspots and open chromatin in Saccharomyces cerevisiae. Genome Res. 19, 2245-2257 (2009
    • (2009) Genome Res , vol.19 , pp. 2245-2257
    • Berchowitz, L.E.1    Hanlon, S.E.2    Lieb, J.D.3    Copenhaver, G.P.4
  • 22
    • 58749092121 scopus 로고    scopus 로고
    • Histone H3 lysine 4 trimethylation marks meiotic recombination initiation sites
    • Borde, V. et al. Histone H3 lysine 4 trimethylation marks meiotic recombination initiation sites. EMBO J. 28, 99-111 (2009
    • (2009) EMBO J. , vol.28 , pp. 99-111
    • Borde, V.1
  • 23
    • 84872249432 scopus 로고    scopus 로고
    • Spp1, a member of the Set1 complex, promotes meiotic DSB formation in promoters by tethering histone H3K4 methylation sites to chromosome axes
    • Sommermeyer, V., Béneut, C., Chaplais, E., Serrentino, M.E. & Borde, V. Spp1, a member of the Set1 complex, promotes meiotic DSB formation in promoters by tethering histone H3K4 methylation sites to chromosome axes. Mol. Cell 49, 43-54 (2013
    • (2013) Mol. Cell , vol.49 , pp. 43-54
    • Sommermeyer, V.1    Béneut, C.2    Chaplais, E.3    Serrentino, M.E.4    Borde, V.5
  • 24
    • 3142590372 scopus 로고    scopus 로고
    • Set1 is required for meiotic S-phase onset, double-strand break formation and middle gene expression
    • Sollier, J. et al. Set1 is required for meiotic S-phase onset, double-strand break formation and middle gene expression. EMBO J. 23, 1957-1967 (2004
    • (2004) EMBO J. , vol.23 , pp. 1957-1967
    • Sollier, J.1
  • 25
    • 84872142934 scopus 로고    scopus 로고
    • The COMPASS subunit Spp1 links histone methylation to initiation of meiotic recombination
    • Acquaviva, L. et al. The COMPASS subunit Spp1 links histone methylation to initiation of meiotic recombination. Science 339, 215-218 (2013
    • (2013) Science , vol.339 , pp. 215-218
    • Acquaviva, L.1
  • 26
    • 84860322730 scopus 로고    scopus 로고
    • Scale matters: The spatial correlation of yeast meiotic DNA breaks with histone H3 trimethylation is driven largely by independent colocalization at promoters
    • Tischfield, S.E. & Keeney, S. Scale matters: The spatial correlation of yeast meiotic DNA breaks with histone H3 trimethylation is driven largely by independent colocalization at promoters. Cell Cycle 11, 1496-1503 (2012
    • (2012) Cell Cycle , vol.11 , pp. 1496-1503
    • Tischfield, S.E.1    Keeney, S.2
  • 27
    • 0033601285 scopus 로고    scopus 로고
    • Genetic definition and sequence analysis of Arabidopsis centromeres
    • Copenhaver, G.P. et al. Genetic definition and sequence analysis of Arabidopsis centromeres. Science 286, 2468-2474 (1999
    • (1999) Science , vol.286 , pp. 2468-2474
    • Copenhaver, G.P.1
  • 28
    • 0000913435 scopus 로고
    • Genetic fine structure of the BRONZE locus in maize
    • Dooner, H.K. Genetic fine structure of the BRONZE locus in maize. Genetics 113, 1021-1036 (1986
    • (1986) Genetics , vol.113 , pp. 1021-1036
    • Dooner, H.K.1
  • 29
    • 81755183075 scopus 로고    scopus 로고
    • Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes
    • Giraut, L. et al. Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes. PLoS Genet. 7, e1002354 (2011
    • (2011) PLoS Genet , vol.7
    • Giraut, L.1
  • 30
    • 70450204614 scopus 로고    scopus 로고
    • A first-generation haplotype map of maize
    • Gore, M.A. et al. A first-generation haplotype map of maize. Science 326, 1115-1117 (2009
    • (2009) Science , vol.326 , pp. 1115-1117
    • Gore, M.A.1
  • 31
    • 84870265846 scopus 로고    scopus 로고
    • A physical, genetic and functional sequence assembly of the barley genome
    • Mayer, K.F.X. et al. A physical, genetic and functional sequence assembly of the barley genome. Nature 491, 711-716 (2012
    • (2012) Nature , vol.491 , pp. 711-716
    • Mayer, K.F.X.1
  • 32
    • 62449334781 scopus 로고    scopus 로고
    • Detailed recombination studies along chromosome 3B provide new insights on crossover distribution in wheat (Triticum aestivum L
    • Saintenac, C et al. Detailed recombination studies along chromosome 3B provide new insights on crossover distribution in wheat (Triticum aestivum L.). Genetics 181, 393-403 (2009
    • (2009) Genetics , vol.181 , pp. 393-403
    • Saintenac, C.1
  • 33
    • 84858865636 scopus 로고    scopus 로고
    • The recombination landscape in Arabidopsis thaliana F2 populations
    • Salomé, P.A. et al. The recombination landscape in Arabidopsis thaliana F2 populations. Heredity 108, 447-455 (2012
    • (2012) Heredity , vol.108 , pp. 447-455
    • Salomé, P.A.1
  • 34
    • 80053384429 scopus 로고    scopus 로고
    • Whole-genome sequencing of multiple Arabidopsis thaliana populations
    • Cao, J. et al. Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat. Genet. 43, 956-963 (2011
    • (2011) Nat. Genet , vol.43 , pp. 956-963
    • Cao, J.1
  • 35
    • 84866168941 scopus 로고    scopus 로고
    • Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants
    • Yelina, N.E. et al. Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants. PLoS Genet. 8, e1002844 (2012
    • (2012) PLoS Genet , vol.8
    • Yelina, N.E.1
  • 36
    • 0036950802 scopus 로고    scopus 로고
    • Bay-0 × Shahdara recombinant inbred line population: A powerful tool for the genetic dissection of complex traits in Arabidopsis
    • Loudet, O., Chaillou, S., Camilleri, C., Bouchez, D. & Daniel-Vedele, F. Bay-0 × Shahdara recombinant inbred line population: A powerful tool for the genetic dissection of complex traits in. Arabidopsis. Theor. Appl. Genet. 104, 1173-1184 (2002
    • (2002) Theor. Appl. Genet , vol.104 , pp. 1173-1184
    • Loudet, O.1    Chaillou, S.2    Camilleri, C.3    Bouchez, D.4    Daniel-Vedele, F.5
  • 37
    • 0034603206 scopus 로고    scopus 로고
    • Integrated cytogenetic map of chromosome arm 4S of A. Thaliana: Structural organization of heterochromatic knob and centromere region
    • Fransz, P.F. et al. Integrated cytogenetic map of chromosome arm 4S of A. thaliana: Structural organization of heterochromatic knob and centromere region. Cell 100, 367-376 (2000
    • (2000) Cell , vol.100 , pp. 367-376
    • Fransz, P.F.1
  • 38
    • 84856270364 scopus 로고    scopus 로고
    • Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel
    • Horton, M.W. et al. Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel. Nat. Genet. 44, 212-216 (2012
    • (2012) Nat. Genet , vol.44 , pp. 212-216
    • Horton, M.W.1
  • 39
    • 84859636918 scopus 로고    scopus 로고
    • A fine-scale chimpanzee genetic map from population sequencing
    • Auton, A. et al. A fine-scale chimpanzee genetic map from population sequencing. Science 336, 193-198 (2012
    • (2012) Science , vol.336 , pp. 193-198
    • Auton, A.1
  • 40
    • 33845368295 scopus 로고    scopus 로고
    • SequenceLDhot: Detecting recombination hotspots
    • Fearnhead, P. SequenceLDhot: Detecting recombination hotspots. Bioinformatics 22, 3061-3066 (2006
    • (2006) Bioinformatics , vol.22 , pp. 3061-3066
    • Fearnhead, P.1
  • 41
    • 80053312817 scopus 로고    scopus 로고
    • Characterization of meiotic crossovers in pollen from Arabidopsis thaliana
    • Drouaud, J. & Mézard, C. Characterization of meiotic crossovers in pollen from Arabidopsis thaliana. Methods Mol. Biol. 745, 223-249 (2011
    • (2011) Methods Mol. Biol , vol.745 , pp. 223-249
    • Drouaud, J.1    Mézard, C.2
  • 44
    • 67650091251 scopus 로고    scopus 로고
    • Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana
    • Zhang, X., Bernatavichute, Y.V., Cokus, S., Pellegrini, M. & Jacobsen, S.E. Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana. Genome Biol. 10, R62 (2009
    • (2009) Genome Biol , vol.10
    • Zhang, X.1    Bernatavichute, Y.V.2    Cokus, S.3    Pellegrini, M.4    Jacobsen, S.E.5
  • 45
    • 84868122260 scopus 로고    scopus 로고
    • Deposition of histone variant H2A.Z within gene bodies regulates responsive genes
    • Coleman-Derr, D. & Zilberman, D. Deposition of histone variant H2A.Z within gene bodies regulates responsive genes. PLoS Genet. 8, e1002988 (2012
    • (2012) PLoS Genet , vol.8
    • Coleman-Derr, D.1    Zilberman, D.2
  • 46
    • 79955112442 scopus 로고    scopus 로고
    • Histone variants and modifications in plant gene regulation
    • Deal, R.B. & Henikoff, S. Histone variants and modifications in plant gene regulation. Curr. Opin. Plant Biol. 14, 116-122 (2011
    • (2011) Curr. Opin. Plant Biol , vol.14 , pp. 116-122
    • Deal, R.B.1    Henikoff, S.2
  • 47
    • 34249068213 scopus 로고    scopus 로고
    • Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis
    • Zhang, X. et al. Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis. PLoS Biol. 5, e129 (2007
    • (2007) PLoS Biol , vol.5
    • Zhang, X.1
  • 48
    • 40749109894 scopus 로고    scopus 로고
    • Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
    • Cokus, S.J. et al. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature 452, 215-219 (2008
    • (2008) Nature , vol.452 , pp. 215-219
    • Cokus, S.J.1
  • 49
    • 0032079514 scopus 로고    scopus 로고
    • Suppression of crossing-over by DNA methylation in Ascobolus
    • Maloisel, L. & Rossignol, J.L. Suppression of crossing-over by DNA methylation in Ascobolus. Genes Dev. 12, 1381-1389 (1998
    • (1998) Genes Dev , vol.12 , pp. 1381-1389
    • Maloisel, L.1    Rossignol, J.L.2
  • 50
    • 67849122320 scopus 로고    scopus 로고
    • MEME SUITE: Tools for motif discovery and searching
    • Bailey, T.L. et al. MEME SUITE: Tools for motif discovery and searching. Nucleic Acids Res. 37, W202-W208 (2009
    • (2009) Nucleic Acids Res , vol.37
    • Bailey, T.L.1
  • 51
    • 33847263536 scopus 로고    scopus 로고
    • Supervised detection of conserved motifs in DNA sequences with cosmo
    • Article8
    • Bembom, O., Keles, S. & van der Laan, M.J. Supervised detection of conserved motifs in DNA sequences with cosmo. Stat. Appl. Genet. Mol. Biol. 6, Article8 (2007
    • (2007) Stat. Appl. Genet. Mol. Biol , vol.6
    • Bembom, O.1    Keles, S.2    Van Der Laan, M.J.3
  • 52
    • 29144465554 scopus 로고    scopus 로고
    • Improved detection of DNA motifs using a self-organized clustering of familial binding profiles
    • Mahony, S., Golden, A., Smith, T.J. & Benos, P.V. Improved detection of DNA motifs using a self-organized clustering of familial binding profiles. Bioinformatics 21 (suppl. 1), i283-i291 (2005
    • (2005) Bioinformatics , vol.21 , Issue.SUPPL. 1
    • Mahony, S.1    Golden, A.2    Smith, T.J.3    Benos, P.V.4
  • 53
    • 0035224579 scopus 로고    scopus 로고
    • An algorithm for finding signals of unknown length in DNA sequences
    • Pavesi, G., Mauri, G. & Pesole, G. An algorithm for finding signals of unknown length in DNA sequences. Bioinformatics 17 (suppl. 1), S207-S214 (2001
    • (2001) Bioinformatics , vol.17 , Issue.SUPPL. 1
    • Pavesi, G.1    Mauri, G.2    Pesole, G.3
  • 54
    • 57149119464 scopus 로고    scopus 로고
    • Distinct modes of regulation by chromatin encoded through nucleosome positioning signals
    • Field, Y. et al. Distinct modes of regulation by chromatin encoded through nucleosome positioning signals. PLOS Comput. Biol. 4, e1000216 (2008
    • (2008) PLOS Comput. Biol , vol.4
    • Field, Y.1
  • 55
    • 34347352200 scopus 로고    scopus 로고
    • Cis- and trans-Acting elements regulate the mouse Psmb9 meiotic recombination hotspot
    • Baudat, F. & de Massy, B. Cis- and trans-Acting elements regulate the mouse Psmb9 meiotic recombination hotspot. PLoS Genet. 3, e100 (2007
    • (2007) PLoS Genet , vol.3
    • Baudat, F.1    De Massy, B.2
  • 56
    • 77956536176 scopus 로고    scopus 로고
    • Comprehensive fine-scale dissection of homologous recombination outcomes at a hot spot in mouse meiosis
    • Cole, F., Keeney, S. & Jasin, M. Comprehensive, fine-scale dissection of homologous recombination outcomes at a hot spot in mouse meiosis. Mol. Cell 39, 700-710 (2010
    • (2010) Mol. Cell , vol.39 , pp. 700-710
    • Cole, F.1    Keeney, S.2    Jasin, M.3
  • 57
    • 26444503776 scopus 로고    scopus 로고
    • Factors influencing recombination frequency and distribution in a human meiotic crossover hotspot
    • Jeffreys, A.J. & Neumann, R. Factors influencing recombination frequency and distribution in a human meiotic crossover hotspot. Hum. Mol. Genet. 14, 2277-2287 (2005
    • (2005) Hum. Mol. Genet , vol.14 , pp. 2277-2287
    • Jeffreys, A.J.1    Neumann, R.2
  • 58
    • 29544451829 scopus 로고    scopus 로고
    • Suppressor of frigida3 encodes a nuclear actin-related protein6 required for floral repression in arabidopsis
    • Choi, K. et al. SUPPRESSOR OF FRIGIDA3 encodes a nuclear ACTIN-RELATED PROTEIN6 required for floral repression in Arabidopsis. Plant Cell 17, 2647-2660 (2005
    • (2005) Plant Cell , vol.17 , pp. 2647-2660
    • Choi, K.1
  • 59
    • 34249820562 scopus 로고    scopus 로고
    • Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z
    • Deal, R.B., Topp, C.N., McKinney, E.C. & Meagher, R.B. Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z. Plant Cell 19, 74-83 (2007
    • (2007) Plant Cell , vol.19 , pp. 74-83
    • Deal, R.B.1    Topp, C.N.2    McKinney, E.C.3    Meagher, R.B.4
  • 60
    • 73149085055 scopus 로고    scopus 로고
    • H2A.Z-containing nucleosomes mediate the thermosensory response in Arabidopsis
    • Kumar, S.V. & Wigge, P.A. H2A.Z-containing nucleosomes mediate the thermosensory response in Arabidopsis. Cell 140, 136-147 (2010
    • (2010) Cell , vol.140 , pp. 136-147
    • Kumar, S.V.1    Wigge, P.A.2
  • 61
    • 55549141877 scopus 로고    scopus 로고
    • Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
    • Zilberman, D., Coleman-Derr, D., Ballinger, T. & Henikoff, S. Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature 456, 125-129 (2008
    • (2008) Nature , vol.456 , pp. 125-129
    • Zilberman, D.1    Coleman-Derr, D.2    Ballinger, T.3    Henikoff, S.4
  • 62
    • 33646130847 scopus 로고    scopus 로고
    • Early in short days 1 (esd1) encodes actin-related protein 6 (atarp6), a putative component of chromatin remodelling complexes that positively regulates flc accumulation in arabidopsis
    • Martin-Trillo, M. et al. EARLY IN SHORT DAYS 1 (ESD1) encodes ACTIN-RELATED PROTEIN 6 (AtARP6), a putative component of chromatin remodelling complexes that positively regulates FLC accumulation in Arabidopsis. Development 133, 1241-1252 (2006
    • (2006) Development , vol.133 , pp. 1241-1252
    • Martin-Trillo, M.1
  • 63
    • 34247231438 scopus 로고    scopus 로고
    • Pollen tetrad-based visual assay for meiotic recombination in Arabidopsis
    • Francis, K.E. et al. Pollen tetrad-based visual assay for meiotic recombination in Arabidopsis. Proc. Natl. Acad. Sci. USA 104, 3913-3918 (2007
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 3913-3918
    • Francis, K.E.1
  • 64
    • 0034334065 scopus 로고    scopus 로고
    • A high-Throughput system for genome-wide measurement of genetic recombination in Arabidopsis thaliana based on transgenic markers
    • Barth, S., Melchinger, A.E., Devezi-Savula, B. & Lübberstedt, T. A high-Throughput system for genome-wide measurement of genetic recombination in Arabidopsis thaliana based on transgenic markers. Funct. Integr. Genomics 1, 200-206 (2000
    • (2000) Funct. Integr. Genomics , vol.1 , pp. 200-206
    • Barth, S.1    Melchinger, A.E.2    Devezi-Savula, B.3    Lübberstedt, T.4
  • 65
    • 33746208832 scopus 로고    scopus 로고
    • Meiotic crossing-over: Obligation and interference
    • Jones, G.H. & Franklin, F.C.H. Meiotic crossing-over: Obligation and interference. Cell 126, 246-248 (2006
    • (2006) Cell , vol.126 , pp. 246-248
    • Jones, G.H.1    Franklin, F.C.H.2
  • 66
    • 27644499231 scopus 로고    scopus 로고
    • A new seed-based assay for meiotic recombination in Arabidopsis thaliana
    • Melamed-Bessudo, C., Yehuda, E., Stuitje, A.R. & Levy, A.A. A new seed-based assay for meiotic recombination in Arabidopsis thaliana. Plant J. 43, 458-466 (2005
    • (2005) Plant J. , vol.43 , pp. 458-466
    • Melamed-Bessudo, C.1    Yehuda, E.2    Stuitje, A.R.3    Levy, A.A.4
  • 67
    • 0026697166 scopus 로고
    • DMC1: A meiosis-specific yeast homolog of E. Coli recA required for recombination, synaptonemal complex formation, and cell cycle progression
    • Bishop, D.K., Park, D., Xu, L. & Kleckner, N. DMC1: A meiosis-specific yeast homolog of E. coli recA required for recombination, synaptonemal complex formation, and cell cycle progression. Cell 69, 439-456 (1992
    • (1992) Cell , vol.69 , pp. 439-456
    • Bishop, D.K.1    Park, D.2    Xu, L.3    Kleckner, N.4
  • 68
    • 0026751113 scopus 로고
    • Rad51 protein involved in repair and recombination in S. Cerevisiae is a RecA-like protein
    • Shinohara, A., Ogawa, H. & Ogawa, T. Rad51 protein involved in repair and recombination in S. cerevisiae is a RecA-like protein. Cell 69, 457-470 (1992
    • (1992) Cell , vol.69 , pp. 457-470
    • Shinohara, A.1    Ogawa, H.2    Ogawa, T.3
  • 69
    • 34548402100 scopus 로고    scopus 로고
    • ASY1 mediates AtDMC1-dependent interhomolog recombination during meiosis in Arabidopsis
    • Sanchez-Moran, E., Santos, J-L., Jones, G.H. & Franklin, F.C.H. ASY1 mediates AtDMC1-dependent interhomolog recombination during meiosis in Arabidopsis. Genes Dev. 21, 2220-2233 (2007
    • (2007) Genes Dev , vol.21 , pp. 2220-2233
    • Sanchez-Moran, E.1    Santos, J.-L.2    Jones, G.H.3    Franklin, F.C.H.4
  • 70
    • 0031892737 scopus 로고    scopus 로고
    • Assaying genome-wide recombination and centromere functions with Arabidopsis tetrads
    • Copenhaver, G.P., Browne, W.E. & Preuss, D. Assaying genome-wide recombination and centromere functions with Arabidopsis tetrads. Proc. Natl. Acad. Sci. USA 95, 247-252 (1998
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 247-252
    • Copenhaver, G.P.1    Browne, W.E.2    Preuss, D.3
  • 71
  • 72
    • 84855304878 scopus 로고    scopus 로고
    • Characterizing the performance of the Conway-Maxwell Poisson generalized linear model
    • Francis, R.A. et al. Characterizing the performance of the Conway-Maxwell Poisson generalized linear model. Risk Anal. 32, 167-183 (2012
    • (2012) Risk Anal , vol.32 , pp. 167-183
    • Francis, R.A.1
  • 73
    • 33645276266 scopus 로고    scopus 로고
    • Reduced meiotic crossovers and delayed prophase I progression in AtMLH3-deficient Arabidopsis
    • Jackson, N. et al. Reduced meiotic crossovers and delayed prophase I progression in AtMLH3-deficient Arabidopsis. EMBO J. 25, 1315-1323 (2006
    • (2006) EMBO J. , vol.25 , pp. 1315-1323
    • Jackson, N.1
  • 74
    • 0037074007 scopus 로고    scopus 로고
    • Physical and functional interactions among basic chromosome organizational features govern early steps of meiotic chiasma formation
    • Blat, Y., Protacio, R.U., Hunter, N. & Kleckner, N. Physical and functional interactions among basic chromosome organizational features govern early steps of meiotic chiasma formation. Cell 111, 791-802 (2002
    • (2002) Cell , vol.111 , pp. 791-802
    • Blat, Y.1    Protacio, R.U.2    Hunter, N.3    Kleckner, N.4
  • 75
    • 79961145877 scopus 로고    scopus 로고
    • Spo11-Accessory proteins link double-strand break sites to the chromosome axis in early meiotic recombination
    • Panizza, S. et al. Spo11-Accessory proteins link double-strand break sites to the chromosome axis in early meiotic recombination. Cell 146, 372-383 (2011
    • (2011) Cell , vol.146 , pp. 372-383
    • Panizza, S.1
  • 76
    • 0034633494 scopus 로고    scopus 로고
    • Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae
    • Gerton, J.L. et al. Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 97, 11383-11390 (2000
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 11383-11390
    • Gerton, J.L.1
  • 77
    • 77957889181 scopus 로고    scopus 로고
    • The SWR1 histone replacement complex causes genetic instability and genome-wide transcription misregulation in the absence of H2A.Z
    • Morillo-Huesca, M., Clemente-Ruiz, M., Andújar, E. & Prado, F. The SWR1 histone replacement complex causes genetic instability and genome-wide transcription misregulation in the absence of H2A.Z. PLoS ONE 5, e12143 (2010
    • (2010) PLoS ONE , vol.5
    • Morillo-Huesca, M.1    Clemente-Ruiz, M.2    Andújar, E.3    Prado, F.4
  • 78
    • 78651510784 scopus 로고    scopus 로고
    • Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity
    • Papamichos-Chronakis, M., Watanabe, S., Rando, O.J. & Peterson, C.L. Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity. Cell 144, 200-213 (2011
    • (2011) Cell , vol.144 , pp. 200-213
    • Papamichos-Chronakis, M.1    Watanabe, S.2    Rando, O.J.3    Peterson, C.L.4
  • 79
    • 77951498531 scopus 로고    scopus 로고
    • High-resolution profiling of γH2AX around DNA double strand breaks in the mammalian genome
    • Iacovoni, J.S. et al. High-resolution profiling of γH2AX around DNA double strand breaks in the mammalian genome. EMBO J. 29, 1446-1457 (2010
    • (2010) EMBO J. , vol.29 , pp. 1446-1457
    • Iacovoni, J.S.1
  • 80
    • 65549129613 scopus 로고    scopus 로고
    • Formation of dynamic γ-H2AX domains along broken DNA strands is distinctly regulated by ATM and MDC1 and dependent upon H2AX densities in chromatin
    • Savic, V. et al. Formation of dynamic γ-H2AX domains along broken DNA strands is distinctly regulated by ATM and MDC1 and dependent upon H2AX densities in chromatin. Mol. Cell 34, 298-310 (2009
    • (2009) Mol. Cell , vol.34 , pp. 298-310
    • Savic, V.1
  • 81
    • 34249989400 scopus 로고    scopus 로고
    • Spreading of mammalian DNA-damage response factors studied by ChIP-chip at damaged telomeres
    • Meier, A. et al. Spreading of mammalian DNA-damage response factors studied by ChIP-chip at damaged telomeres. EMBO J. 26, 2707-2718 (2007
    • (2007) EMBO J. , vol.26 , pp. 2707-2718
    • Meier, A.1
  • 82
    • 33645991807 scopus 로고    scopus 로고
    • Chiasma formation: Chromatin/axis interplay and the role(s) of the synaptonemal complex
    • Kleckner, N. Chiasma formation: Chromatin/axis interplay and the role(s) of the synaptonemal complex. Chromosoma 115, 175-194 (2006
    • (2006) Chromosoma , vol.115 , pp. 175-194
    • Kleckner, N.1
  • 83
    • 74249088732 scopus 로고    scopus 로고
    • Accelerated evolution of the Prdm9 speciation gene across diverse metazoan taxa
    • Oliver, P.L. et al. Accelerated evolution of the Prdm9 speciation gene across diverse metazoan taxa. PLoS Genet. 5, e1000753 (2009
    • (2009) PLoS Genet , vol.5
    • Oliver, P.L.1
  • 85
    • 34547549855 scopus 로고    scopus 로고
    • Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana
    • Borevitz, J.O. et al. Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 104, 12057-12062 (2007
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 12057-12062
    • Borevitz, J.O.1
  • 86
    • 34547108086 scopus 로고    scopus 로고
    • Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana
    • Clark, R.M. et al. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 317, 338-342 (2007
    • (2007) Science , vol.317 , pp. 338-342
    • Clark, R.M.1
  • 87
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • Benson, G. Tandem repeats finder: A program to analyze DNA sequences. Nucleic Acids Res. 27, 573-580 (1999
    • (1999) Nucleic Acids Res , vol.27 , pp. 573-580
    • Benson, G.1
  • 88
    • 6344289639 scopus 로고    scopus 로고
    • Inverted repeat structure of the human genome: The X-chromosome contains a preponderance of large, highly homologous inverted repeats that contain testes genes
    • Warburton, P.E., Giordano, J., Cheung, F., Gelfand, Y. & Benson, G. Inverted repeat structure of the human genome: The X-chromosome contains a preponderance of large, highly homologous inverted repeats that contain testes genes. Genome Res. 14, 1861-1869 (2004
    • (2004) Genome Res , vol.14 , pp. 1861-1869
    • Warburton, P.E.1    Giordano, J.2    Cheung, F.3    Gelfand, Y.4    Benson, G.5
  • 89
    • 34547617172 scopus 로고    scopus 로고
    • Recombination rate estimation in the presence of hotspots
    • Auton, A. & McVean, G. Recombination rate estimation in the presence of hotspots. Genome Res. 17, 1219-1227 (2007
    • (2007) Genome Res , vol.17 , pp. 1219-1227
    • Auton, A.1    McVean, G.2
  • 90
    • 21244459873 scopus 로고    scopus 로고
    • Zoo: S3 infrastructure for regular and irregular time series
    • Achim, Z. & Grothendieck, G. zoo: S3 infrastructure for regular and irregular time series. J. Stat. Softw. 14, 1-27 (2005
    • (2005) J. Stat. Softw , vol.14 , pp. 1-27
    • Achim, Z.1    Grothendieck, G.2
  • 91
    • 38149133833 scopus 로고    scopus 로고
    • Fluorescent Arabidopsis tetrads: A visual assay for quickly developing large crossover and crossover interference data sets
    • Berchowitz, L.E. & Copenhaver, G.P. Fluorescent Arabidopsis tetrads: A visual assay for quickly developing large crossover and crossover interference data sets. Nat. Protoc. 3, 41-50 (2008
    • (2008) Nat. Protoc , vol.3 , pp. 41-50
    • Berchowitz, L.E.1    Copenhaver, G.P.2
  • 92
    • 80053132716 scopus 로고    scopus 로고
    • Multiple reference genomes and transcriptomes for Arabidopsis thaliana
    • Gan, X. et al. Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 477, 419-423 (2011
    • (2011) Nature , vol.477 , pp. 419-423
    • Gan, X.1
  • 94
    • 5444276633 scopus 로고    scopus 로고
    • The Arabidopsis MutS homolog AtMSH4 functions at an early step in recombination: Evidence for two classes of recombination in Arabidopsis
    • Higgins, J.D., Armstrong, S.J., Franklin, F.C.H. & Jones, G.H. The Arabidopsis MutS homolog AtMSH4 functions at an early step in recombination: Evidence for two classes of recombination in Arabidopsis. Genes Dev. 18, 2557-2570 (2004
    • (2004) Genes Dev , vol.18 , pp. 2557-2570
    • Higgins, J.D.1    Armstrong, S.J.2    Franklin, F.C.H.3    Jones, G.H.4
  • 95
    • 84859179125 scopus 로고    scopus 로고
    • Inter-homolog crossing-over and synapsis in Arabidopsis meiosis are dependent on the chromosome axis protein AtASY3
    • Ferdous, M. et al. Inter-homolog crossing-over and synapsis in Arabidopsis meiosis are dependent on the chromosome axis protein AtASY3. PLoS Genet. 8, e1002507 (2012
    • (2012) PLoS Genet , vol.8
    • Ferdous, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.