Analysis of RNA decay factor mediated RNA stability contributions on RNA abundance

BMC Genomics

Volumn 16, Issue 1, 2015, Pages

  Maekawa, Sho ^a   Imamachi, Naoto ^a   Irie, Takuma ^a   Tani, Hidenori ^b   Matsumoto, Kyoko ^a   Mizutani, Rena ^a   Imamura, Katsutoshi ^a   Kakeda, Miho ^a   Yada, Tetsushi ^c   Sugano, Sumio ^a   Suzuki, Yutaka ^a   Akimitsu, Nobuyoshi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^c KYUSHU INSTITUTE OF TECHNOLOGY   (Japan)

Author keywords

BRIC seq; ChIP seq; Estimation of transcriptional level; Integrative analysis; Next generation sequencing; RNA stability

Indexed keywords

BROXURIDINE; LONG UNTRANSLATED RNA; MESSENGER RNA; PROTEIN EXOSC5; PROTEIN STAU1; PROTEIN UPF1; RNA; RNA BINDING PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTOME; UNCLASSIFIED DRUG; CYTOSKELETON PROTEIN; EXOSC5 PROTEIN, HUMAN; EXOSOME MULTIENZYME RIBONUCLEASE COMPLEX; HISTONE; STAU1 PROTEIN, HUMAN; TRANSACTIVATOR PROTEIN; TUMOR ANTIGEN; UPF1 PROTEIN, HUMAN;

ARTICLE; CELLS BY BODY ANATOMY; CHROMATIN IMMUNOPRECIPITATION; FEEDBACK SYSTEM; GENE EXPRESSION; GENETIC CODE; HELA CELL LINE; HUMAN; HUMAN CELL; PROTEIN EXPRESSION; REGULATORY MECHANISM; RNA ANALYSIS; RNA DEGRADATION; RNA PROCESSING; RNA SEQUENCE; RNA STABILITY; RNA TRANSCRIPTION; STEADY STATE; TRANSCRIPTION REGULATION; CHEMISTRY; GENE EXPRESSION REGULATION; HALF LIFE TIME; HIGH THROUGHPUT SEQUENCING; METABOLISM; SEQUENCE ANALYSIS;

ANTIGENS, NEOPLASM; CHROMATIN IMMUNOPRECIPITATION; CYTOSKELETAL PROTEINS; EXOSOME MULTIENZYME RIBONUCLEASE COMPLEX; GENE EXPRESSION REGULATION; HALF-LIFE; HELA CELLS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HISTONES; HUMANS; RNA; RNA STABILITY; RNA, LONG NONCODING; RNA, MESSENGER; RNA-BINDING PROTEINS; SEQUENCE ANALYSIS, RNA; TRANS-ACTIVATORS;

EID: 84924871667     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-015-1358-y     Document Type: Article

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