메뉴 건너뛰기




Volumn 11, Issue 2, 2015, Pages 1-32

Recent Selective Sweeps in North American Drosophila melanogaster Show Signatures of Soft Sweeps

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; EVOLUTIONARY ADAPTATION; GENETIC VARIABILITY; HAPLOTYPE; HOMOZYGOSITY; NONHUMAN; POINT MUTATION; POPULATION SIZE; SELECTIVE SWEEP; ADAPTATION; ALLELE; ANIMAL; GENE FREQUENCY; GENETIC SELECTION; GENETICS; INSECT GENOME; MOLECULAR EVOLUTION; POPULATION DENSITY; POPULATION GENETICS; UNITED STATES;

EID: 84924411185     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1005004     Document Type: Article
Times cited : (307)

References (64)
  • 1
    • 0037186608 scopus 로고    scopus 로고
    • Testing the neutral theory of molecular evolution with genomic data from Drosophila
    • Fay JC, Wyckoff GJ, Wu CI, (2002) Testing the neutral theory of molecular evolution with genomic data from Drosophila. Nature 415: 1024–1026. 11875569
    • (2002) Nature , vol.415 , pp. 1024-1026
    • Fay, J.C.1    Wyckoff, G.J.2    Wu, C.I.3
  • 2
    • 0037186564 scopus 로고    scopus 로고
    • Adaptive protein evolution in Drosophila
    • Smith NG, Eyre-Walker A, (2002) Adaptive protein evolution in Drosophila. Nature 415: 1022–1024. 11875568
    • (2002) Nature , vol.415 , pp. 1022-1024
    • Smith, N.G.1    Eyre-Walker, A.2
  • 3
    • 3042544623 scopus 로고    scopus 로고
    • The genomic rate of adaptive amino acid substitution in Drosophila
    • Bierne N, Eyre-Walker A, (2004) The genomic rate of adaptive amino acid substitution in Drosophila. Molecular Biology and Evolution 21: 1350–1360. 15044594
    • (2004) Molecular Biology and Evolution , vol.21 , pp. 1350-1360
    • Bierne, N.1    Eyre-Walker, A.2
  • 4
    • 27144491328 scopus 로고    scopus 로고
    • Adaptive evolution of non-coding DNA in Drosophila
    • Andolfatto P, (2005) Adaptive evolution of non-coding DNA in Drosophila. Nature 437: 1149–1152. 16237443
    • (2005) Nature , vol.437 , pp. 1149-1152
    • Andolfatto, P.1
  • 6
    • 68949202924 scopus 로고    scopus 로고
    • Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change
    • Eyre-Walker A, Keightley PD, (2009) Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change. Molecular Biology and Evolution 26: 2097–2108. doi: 10.1093/molbev/msp119 19535738
    • (2009) Molecular Biology and Evolution , vol.26 , pp. 2097-2108
    • Eyre-Walker, A.1    Keightley, P.D.2
  • 7
    • 67651050074 scopus 로고    scopus 로고
    • Pervasive natural selection in the Drosophila genome?
    • Sella G, Petrov DA, Przeworski M, Andolfatto P, (2009) Pervasive natural selection in the Drosophila genome? PLoS Genetics 5: e1000495. doi: 10.1371/journal.pgen.1000495 19503600
    • (2009) PLoS Genetics , vol.5 , pp. 1000495
    • Sella, G.1    Petrov, D.A.2    Przeworski, M.3    Andolfatto, P.4
  • 8
    • 83455176994 scopus 로고    scopus 로고
    • A method for inferring the rate of occurrence and fitness effects of advantageous mutations
    • Schneider A, Charlesworth B, Eyre-Walker A, Keightley PD, (2011) A method for inferring the rate of occurrence and fitness effects of advantageous mutations. Genetics 189: 1427–1437. doi: 10.1534/genetics.111.131730 21954160
    • (2011) Genetics , vol.189 , pp. 1427-1437
    • Schneider, A.1    Charlesworth, B.2    Eyre-Walker, A.3    Keightley, P.D.4
  • 9
    • 84876350995 scopus 로고    scopus 로고
    • A comparison of models to infer the distribution of fitness effects of new mutations
    • Kousathanas A, Keightley PD, (2013) A comparison of models to infer the distribution of fitness effects of new mutations. Genetics 193: 1197–1208. doi: 10.1534/genetics.112.148023 23341416
    • (2013) Genetics , vol.193 , pp. 1197-1208
    • Kousathanas, A.1    Keightley, P.D.2
  • 10
    • 37249036929 scopus 로고    scopus 로고
    • Genomewide spatial correspondence between nonsynonymous divergence and neutral polymorphism reveals extensive adaptation in Drosophila
    • Macpherson JM, Sella G, Davis JC, Petrov DA, (2007) Genomewide spatial correspondence between nonsynonymous divergence and neutral polymorphism reveals extensive adaptation in Drosophila. Genetics 177: 2083–2099. 18073425
    • (2007) Genetics , vol.177 , pp. 2083-2099
    • Macpherson, J.M.1    Sella, G.2    Davis, J.C.3    Petrov, D.A.4
  • 11
    • 79952263624 scopus 로고    scopus 로고
    • Pervasive adaptive protein evolution apparent in diversity patterns around amino acid substitutions in Drosophila simulans
    • Sattath S, Elyashiv E, Kolodny O, Rinott Y, Sella G, (2011) Pervasive adaptive protein evolution apparent in diversity patterns around amino acid substitutions in Drosophila simulans. PLoS Genetics 7: e1001302. doi: 10.1371/journal.pgen.1001302 21347283
    • (2011) PLoS Genetics , vol.7 , pp. 1001302
    • Sattath, S.1    Elyashiv, E.2    Kolodny, O.3    Rinott, Y.4    Sella, G.5
  • 12
    • 76749097550 scopus 로고    scopus 로고
    • The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation
    • Pritchard JK, Pickrell JK, Coop G, (2010) The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation. Current Biology 20: R208–215. doi: 10.1016/j.cub.2009.11.055 20178769
    • (2010) Current Biology , vol.20 , pp. 208-215
    • Pritchard, J.K.1    Pickrell, J.K.2    Coop, G.3
  • 13
    • 84875230189 scopus 로고    scopus 로고
    • Genomic signatures of selection at linked sites: unifying the disparity among species
    • Cutter AD, Payseur BA, (2013) Genomic signatures of selection at linked sites: unifying the disparity among species. Nature Reviews Genetics 14: 262–274. doi: 10.1038/nrg3425 23478346
    • (2013) Nature Reviews Genetics , vol.14 , pp. 262-274
    • Cutter, A.D.1    Payseur, B.A.2
  • 14
    • 84885911072 scopus 로고    scopus 로고
    • Population genomics of rapid adaptation by soft selective sweeps
    • Messer PW, Petrov DA, (2013) Population genomics of rapid adaptation by soft selective sweeps. Trends in Ecology & Evolution 28: 659–669.
    • (2013) Trends in Ecology & Evolution , vol.28 , pp. 659-669
    • Messer, P.W.1    Petrov, D.A.2
  • 16
    • 2942560860 scopus 로고    scopus 로고
    • Mutations of acetylcholinesterase which confer insecticide resistance in Drosophila melanogaster populations
    • Menozzi P, Shi MA, Lougarre A, Tang ZH, Fournier D, (2004) Mutations of acetylcholinesterase which confer insecticide resistance in Drosophila melanogaster populations. BMC Evolutionary Biology 4: 4. 15018651
    • (2004) BMC Evolutionary Biology , vol.4 , pp. 4
    • Menozzi, P.1    Shi, M.A.2    Lougarre, A.3    Tang, Z.H.4    Fournier, D.5
  • 17
    • 77954167479 scopus 로고    scopus 로고
    • Evidence that adaptation in Drosophila is not limited by mutation at single sites
    • Karasov T, Messer PW, Petrov DA, (2010) Evidence that adaptation in Drosophila is not limited by mutation at single sites. PLoS Genetics 6: e1000924. doi: 10.1371/journal.pgen.1000924 20585551
    • (2010) PLoS Genetics , vol.6 , pp. 1000924
    • Karasov, T.1    Messer, P.W.2    Petrov, D.A.3
  • 18
    • 0035207207 scopus 로고    scopus 로고
    • DDT resistance in Drosophila correlates with Cyp6g1 over-expression and confers cross-resistance to the neonicotinoid imidacloprid
    • Daborn P, Boundy S, Yen J, Pittendrigh B, Ffrench-Constant R, (2001) DDT resistance in Drosophila correlates with Cyp6g1 over-expression and confers cross-resistance to the neonicotinoid imidacloprid. Molecular Genetics and Genomics 266: 556–563. 11810226
    • (2001) Molecular Genetics and Genomics , vol.266 , pp. 556-563
    • Daborn, P.1    Boundy, S.2    Yen, J.3    Pittendrigh, B.4    Ffrench-Constant, R.5
  • 19
    • 77957659569 scopus 로고    scopus 로고
    • Copy number variation and transposable elements feature in recent, ongoing adaptation at the Cyp6g1 locus
    • Schmidt JM, Good RT, Appleton B, Sherrard J, Raymant GC, et al. (2010) Copy number variation and transposable elements feature in recent, ongoing adaptation at the Cyp6g1 locus. PLoS Genetics 6: e1000998. doi: 10.1371/journal.pgen.1000998 20585622
    • (2010) PLoS Genetics , vol.6 , pp. 1000998
    • Schmidt, J.M.1    Good, R.T.2    Appleton, B.3    Sherrard, J.4    Raymant, G.C.5
  • 20
    • 23044509495 scopus 로고    scopus 로고
    • Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila
    • Aminetzach YT, Macpherson JM, Petrov DA, (2005) Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila. Science 309: 764–767. 16051794
    • (2005) Science , vol.309 , pp. 764-767
    • Aminetzach, Y.T.1    Macpherson, J.M.2    Petrov, D.A.3
  • 21
    • 80055085714 scopus 로고    scopus 로고
    • Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a Duplication
    • Magwire MM, Bayer F, Webster CL, Cao C, Jiggins FM, (2011) Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a Duplication. PLoS Genetics 7: e1002337. doi: 10.1371/journal.pgen.1002337 22028673
    • (2011) PLoS Genetics , vol.7 , pp. 1002337
    • Magwire, M.M.1    Bayer, F.2    Webster, C.L.3    Cao, C.4    Jiggins, F.M.5
  • 22
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favourable gene
    • Maynard Smith J, Haigh J, (1974) The hitch-hiking effect of a favourable gene. Genetical Research 23: 23–35. 4407212
    • (1974) Genetical Research , vol.23 , pp. 23-35
    • Maynard Smith, J.1    Haigh, J.2
  • 23
    • 0024372736 scopus 로고
    • The “hitchhiking effect” revisited
    • Kaplan NL, Hudson RR, Langley CH, (1989) The “hitchhiking effect” revisited. Genetics 123: 887–899. 2612899
    • (1989) Genetics , vol.123 , pp. 887-899
    • Kaplan, N.L.1    Hudson, R.R.2    Langley, C.H.3
  • 24
    • 0036189827 scopus 로고    scopus 로고
    • Detecting a local signature of genetic hitchhiking along a recombining chromosome
    • Kim Y, Stephan W, (2002) Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765–777. 11861577
    • (2002) Genetics , vol.160 , pp. 765-777
    • Kim, Y.1    Stephan, W.2
  • 25
    • 0035109378 scopus 로고    scopus 로고
    • Haldane’s sieve and adaptation from the standing genetic variation
    • Orr HA, Betancourt AJ, (2001) Haldane’s sieve and adaptation from the standing genetic variation. Genetics 157: 875–884. 11157004
    • (2001) Genetics , vol.157 , pp. 875-884
    • Orr, H.A.1    Betancourt, A.J.2
  • 27
    • 18844439645 scopus 로고    scopus 로고
    • Soft sweeps: molecular population genetics of adaptation from standing genetic variation
    • Hermisson J, Pennings PS, (2005) Soft sweeps: molecular population genetics of adaptation from standing genetic variation. Genetics 169: 2335–2352. 15716498
    • (2005) Genetics , vol.169 , pp. 2335-2352
    • Hermisson, J.1    Pennings, P.S.2
  • 28
    • 28644440530 scopus 로고    scopus 로고
    • The signature of positive selection on standing genetic variation
    • Przeworski M, Coop G, Wall JD, (2005) The signature of positive selection on standing genetic variation. Evolution 59: 2312–2323. 16396172
    • (2005) Evolution , vol.59 , pp. 2312-2323
    • Przeworski, M.1    Coop, G.2    Wall, J.D.3
  • 29
    • 33646592536 scopus 로고    scopus 로고
    • Soft sweeps II—molecular population genetics of adaptation from recurrent mutation or migration
    • Pennings PS, Hermisson J, (2006) Soft sweeps II—molecular population genetics of adaptation from recurrent mutation or migration. Molecular Biology and Evolution 23: 1076–1084. 16520336
    • (2006) Molecular Biology and Evolution , vol.23 , pp. 1076-1084
    • Pennings, P.S.1    Hermisson, J.2
  • 30
    • 84899542092 scopus 로고    scopus 로고
    • On detecting incomplete soft or hard selective sweeps using haplotype structure
    • Ferrer-Admetlla A, Liang M, Korneliussen T, Nielsen R, (2014) On detecting incomplete soft or hard selective sweeps using haplotype structure. Molecular Biology and Evolution 31: 1275–1291. doi: 10.1093/molbev/msu077 24554778
    • (2014) Molecular Biology and Evolution , vol.31 , pp. 1275-1291
    • Ferrer-Admetlla, A.1    Liang, M.2    Korneliussen, T.3    Nielsen, R.4
  • 31
    • 0026529344 scopus 로고
    • Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster
    • Begun DJ, Aquadro CF, (1992) Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. Nature 356: 519–520. 1560824
    • (1992) Nature , vol.356 , pp. 519-520
    • Begun, D.J.1    Aquadro, C.F.2
  • 32
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F, (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585–595. 2513255
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 33
    • 0029036829 scopus 로고
    • The hitchhiking effect on the site frequency spectrum of DNA polymorphisms
    • Braverman JM, Hudson RR, Kaplan NL, Langley CH, Stephan W, (1995) The hitchhiking effect on the site frequency spectrum of DNA polymorphisms. Genetics 140: 783–796. 7498754
    • (1995) Genetics , vol.140 , pp. 783-796
    • Braverman, J.M.1    Hudson, R.R.2    Kaplan, N.L.3    Langley, C.H.4    Stephan, W.5
  • 34
    • 0033911640 scopus 로고    scopus 로고
    • Hitchhiking under positive Darwinian selection
    • Fay JC, Wu CI, (2000) Hitchhiking under positive Darwinian selection. Genetics 155: 1405–1413. 10880498
    • (2000) Genetics , vol.155 , pp. 1405-1413
    • Fay, J.C.1    Wu, C.I.2
  • 36
    • 84888582669 scopus 로고    scopus 로고
    • Detecting natural selection in genomic data
    • Vitti JJ, Grossman SR, Sabeti PC, (2013) Detecting natural selection in genomic data. Annual Review of Genetics 47: 97–120. doi: 10.1146/annurev-genet-111212-133526 24274750
    • (2013) Annual Review of Genetics , vol.47 , pp. 97-120
    • Vitti, J.J.1    Grossman, S.R.2    Sabeti, P.C.3
  • 37
    • 0028215929 scopus 로고
    • Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster
    • Hudson RR, Bailey K, Skarecky D, Kwiatowski J, Ayala FJ, (1994) Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster. Genetics 136: 1329–1340. 8013910
    • (1994) Genetics , vol.136 , pp. 1329-1340
    • Hudson, R.R.1    Bailey, K.2    Skarecky, D.3    Kwiatowski, J.4    Ayala, F.J.5
  • 38
    • 0031773191 scopus 로고    scopus 로고
    • Neutrality tests based on the distribution of haplotypes under an infinite-site model
    • Depaulis F, Veuille M, (1998) Neutrality tests based on the distribution of haplotypes under an infinite-site model. Molecular Biology and Evolution 15: 1788–1790. 9917213
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 1788-1790
    • Depaulis, F.1    Veuille, M.2
  • 39
    • 0037167852 scopus 로고    scopus 로고
    • Detecting recent positive selection in the human genome from haplotype structure
    • Sabeti PC, Reich DE, Higgins JM, Levine HZ, Richter DJ, et al. (2002) Detecting recent positive selection in the human genome from haplotype structure. Nature 419: 832–837. 12397357
    • (2002) Nature , vol.419 , pp. 832-837
    • Sabeti, P.C.1    Reich, D.E.2    Higgins, J.M.3    Levine, H.Z.4    Richter, D.J.5
  • 41
    • 33845971545 scopus 로고    scopus 로고
    • Soft sweeps III: the signature of positive selection from recurrent mutation
    • Pennings PS, Hermisson J, (2006) Soft sweeps III: the signature of positive selection from recurrent mutation. PLoS Genetics 2: e186. 17173482
    • (2006) PLoS Genetics , vol.2 , pp. 186
    • Pennings, P.S.1    Hermisson, J.2
  • 42
    • 33744815615 scopus 로고    scopus 로고
    • How reliable are empirical genomic scans for selective sweeps?
    • Teshima KM, Coop G, Przeworski M, (2006) How reliable are empirical genomic scans for selective sweeps? Genome Research 16: 702–712. 16687733
    • (2006) Genome Research , vol.16 , pp. 702-712
    • Teshima, K.M.1    Coop, G.2    Przeworski, M.3
  • 43
    • 84855216527 scopus 로고    scopus 로고
    • The effect of recurrent mutation on the linkage disequilibrium under a selective sweep
    • Pokalyuk C, (2012) The effect of recurrent mutation on the linkage disequilibrium under a selective sweep. Journal of Mathematical Biology 64: 291–317. doi: 10.1007/s00285-011-0411-y 21359840
    • (2012) Journal of Mathematical Biology , vol.64 , pp. 291-317
    • Pokalyuk, C.1
  • 44
    • 84863012360 scopus 로고    scopus 로고
    • The Drosophila melanogaster Genetic Reference Panel
    • Mackay TF, Richards S, Stone EA, Barbadilla A, Ayroles JF, et al. (2012) The Drosophila melanogaster Genetic Reference Panel. Nature 482: 173–178. doi: 10.1038/nature10811 22318601
    • (2012) Nature , vol.482 , pp. 173-178
    • Mackay, T.F.1    Richards, S.2    Stone, E.A.3    Barbadilla, A.4    Ayroles, J.F.5
  • 45
    • 84871785145 scopus 로고    scopus 로고
    • Demographic inference reveals African and European admixture in the North American Drosophila melanogaster population
    • Duchen P, Zivkovic D, Hutter S, Stephan W, Laurent S, (2013) Demographic inference reveals African and European admixture in the North American Drosophila melanogaster population. Genetics 193: 291–301. doi: 10.1534/genetics.112.145912 23150605
    • (2013) Genetics , vol.193 , pp. 291-301
    • Duchen, P.1    Zivkovic, D.2    Hutter, S.3    Stephan, W.4    Laurent, S.5
  • 46
    • 33644763127 scopus 로고    scopus 로고
    • Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster
    • Thornton K, Andolfatto P, (2006) Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster. Genetics 172: 1607–1619. 16299396
    • (2006) Genetics , vol.172 , pp. 1607-1619
    • Thornton, K.1    Andolfatto, P.2
  • 47
    • 73449149044 scopus 로고    scopus 로고
    • Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
    • Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD, (2009) Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS Genetics 5: e1000695. doi: 10.1371/journal.pgen.1000695 19851460
    • (2009) PLoS Genetics , vol.5 , pp. 1000695
    • Gutenkunst, R.N.1    Hernandez, R.D.2    Williamson, S.H.3    Bustamante, C.D.4
  • 48
    • 67650064592 scopus 로고    scopus 로고
    • Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines
    • Keightley PD, Trivedi U, Thomson M, Oliver F, Kumar S, et al. (2009) Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines. Genome Research 19: 1195–1201. doi: 10.1101/gr.091231.109 19439516
    • (2009) Genome Research , vol.19 , pp. 1195-1201
    • Keightley, P.D.1    Trivedi, U.2    Thomson, M.3    Oliver, F.4    Kumar, S.5
  • 49
    • 84868143643 scopus 로고    scopus 로고
    • The many landscapes of recombination in Drosophila melanogaster
    • Comeron JM, Ratnappan R, Bailin S, (2012) The many landscapes of recombination in Drosophila melanogaster. PLoS Genetics 8: e1002905. doi: 10.1371/journal.pgen.1002905 23071443
    • (2012) PLoS Genetics , vol.8 , pp. 1002905
    • Comeron, J.M.1    Ratnappan, R.2    Bailin, S.3
  • 50
    • 0035107520 scopus 로고    scopus 로고
    • Recombination and the frequency spectrum in Drosophila melanogaster and Drosophila simulans
    • Przeworski M, Wall JD, Andolfatto P, (2001) Recombination and the frequency spectrum in Drosophila melanogaster and Drosophila simulans. Molecular Biology and Evolution 18: 291–298. 11230530
    • (2001) Molecular Biology and Evolution , vol.18 , pp. 291-298
    • Przeworski, M.1    Wall, J.D.2    Andolfatto, P.3
  • 52
    • 84908052687 scopus 로고    scopus 로고
    • Soft selective sweeps in complex demographic scenarios
    • Wilson BA, Petrov DA, Messer PW, (2014) Soft selective sweeps in complex demographic scenarios. Genetics 198: 669–684. doi: 10.1534/genetics.114.165571 25060100
    • (2014) Genetics , vol.198 , pp. 669-684
    • Wilson, B.A.1    Petrov, D.A.2    Messer, P.W.3
  • 53
    • 84862508204 scopus 로고    scopus 로고
    • Estimating the strength of selective sweeps from deep population diversity data
    • Messer PW, Neher RA, (2012) Estimating the strength of selective sweeps from deep population diversity data. Genetics 191: 593–605. doi: 10.1534/genetics.112.138461 22491190
    • (2012) Genetics , vol.191 , pp. 593-605
    • Messer, P.W.1    Neher, R.A.2
  • 55
    • 84903452150 scopus 로고    scopus 로고
    • Background selection as baseline for nucleotide variation across the Drosophila genome
    • Comeron JM, (2014) Background selection as baseline for nucleotide variation across the Drosophila genome. PLoS Genetics 10: e1004434. doi: 10.1371/journal.pgen.1004434 24968283
    • (2014) PLoS Genetics , vol.10 , pp. 1004434
    • Comeron, J.M.1
  • 56
    • 84901393253 scopus 로고    scopus 로고
    • Genome-wide signals of positive selection in human evolution
    • Enard D, Messer PW, Petrov DA, (2014) Genome-wide signals of positive selection in human evolution. Genome Research 24: 885–895. doi: 10.1101/gr.164822.113 24619126
    • (2014) Genome Research , vol.24 , pp. 885-895
    • Enard, D.1    Messer, P.W.2    Petrov, D.A.3
  • 57
    • 84901459944 scopus 로고    scopus 로고
    • Exploring the occurrence of classic selective sweeps in humans using whole-genome sequencing data sets
    • Fagny M, Patin E, Enard D, Barreiro LB, Quintana-Murci L, et al. (2014) Exploring the occurrence of classic selective sweeps in humans using whole-genome sequencing data sets. Molecular Biology and Evolution 31: 1850–1868. doi: 10.1093/molbev/msu118 24694833
    • (2014) Molecular Biology and Evolution , vol.31 , pp. 1850-1868
    • Fagny, M.1    Patin, E.2    Enard, D.3    Barreiro, L.B.4    Quintana-Murci, L.5
  • 58
    • 78951480118 scopus 로고    scopus 로고
    • Parallel adaptation: one or many waves of advance of an advantageous allele?
    • Ralph P, Coop G, (2010) Parallel adaptation: one or many waves of advance of an advantageous allele? Genetics 186: 647–668. doi: 10.1534/genetics.110.119594 20660645
    • (2010) Genetics , vol.186 , pp. 647-668
    • Ralph, P.1    Coop, G.2
  • 59
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M, (1991) Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652–654. 1904993
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 60
    • 38849194141 scopus 로고    scopus 로고
    • Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome
    • Andolfatto P, (2007) Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome. Genome Research 17: 1755–1762. 17989248
    • (2007) Genome Research , vol.17 , pp. 1755-1762
    • Andolfatto, P.1
  • 61
    • 77955381733 scopus 로고    scopus 로고
    • MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus
    • Ewing G, Hermisson J, (2010) MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus. Bioinformatics 26: 2064–2065. doi: 10.1093/bioinformatics/btq322 20591904
    • (2010) Bioinformatics , vol.26 , pp. 2064-2065
    • Ewing, G.1    Hermisson, J.2
  • 62
    • 77952800173 scopus 로고    scopus 로고
    • On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila
    • Parsch J, Novozhilov S, Saminadin-Peter SS, Wong KM, Andolfatto P, (2010) On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila. Molecular Biology and Evolution 27: 1226–1234. doi: 10.1093/molbev/msq046 20150340
    • (2010) Molecular Biology and Evolution , vol.27 , pp. 1226-1234
    • Parsch, J.1    Novozhilov, S.2    Saminadin-Peter, S.S.3    Wong, K.M.4    Andolfatto, P.5
  • 63
    • 84878486976 scopus 로고    scopus 로고
    • Strong purifying selection at synonymous sites in D. melanogaster
    • Lawrie DS, Messer PW, Hershberg R, Petrov DA, (2013) Strong purifying selection at synonymous sites in D. melanogaster. PLoS Genetics 9: e1003527. doi: 10.1371/journal.pgen.1003527 23737754
    • (2013) PLoS Genetics , vol.9 , pp. 1003527
    • Lawrie, D.S.1    Messer, P.W.2    Hershberg, R.3    Petrov, D.A.4
  • 64
    • 33750491918 scopus 로고    scopus 로고
    • Inferring the demographic history and rate of adaptive substitution in Drosophila
    • Li H, Stephan W, (2006) Inferring the demographic history and rate of adaptive substitution in Drosophila. PLoS Genetics 2: e166. 17040129
    • (2006) PLoS Genetics , vol.2 , pp. 166
    • Li, H.1    Stephan, W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.