-
1
-
-
0037186608
-
Testing the neutral theory of molecular evolution with genomic data from Drosophila
-
Fay JC, Wyckoff GJ, Wu CI, (2002) Testing the neutral theory of molecular evolution with genomic data from Drosophila. Nature 415: 1024–1026. 11875569
-
(2002)
Nature
, vol.415
, pp. 1024-1026
-
-
Fay, J.C.1
Wyckoff, G.J.2
Wu, C.I.3
-
2
-
-
0037186564
-
Adaptive protein evolution in Drosophila
-
Smith NG, Eyre-Walker A, (2002) Adaptive protein evolution in Drosophila. Nature 415: 1022–1024. 11875568
-
(2002)
Nature
, vol.415
, pp. 1022-1024
-
-
Smith, N.G.1
Eyre-Walker, A.2
-
3
-
-
3042544623
-
The genomic rate of adaptive amino acid substitution in Drosophila
-
Bierne N, Eyre-Walker A, (2004) The genomic rate of adaptive amino acid substitution in Drosophila. Molecular Biology and Evolution 21: 1350–1360. 15044594
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 1350-1360
-
-
Bierne, N.1
Eyre-Walker, A.2
-
4
-
-
27144491328
-
Adaptive evolution of non-coding DNA in Drosophila
-
Andolfatto P, (2005) Adaptive evolution of non-coding DNA in Drosophila. Nature 437: 1149–1152. 16237443
-
(2005)
Nature
, vol.437
, pp. 1149-1152
-
-
Andolfatto, P.1
-
5
-
-
33847781444
-
Adaptive genic evolution in the Drosophila genomes
-
Shapiro JA, Huang W, Zhang C, Hubisz MJ, Lu J, et al. (2007) Adaptive genic evolution in the Drosophila genomes. Proceedings of the National Academy of Sciences of the United States of America 104: 2271–2276. 17284599
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, pp. 2271-2276
-
-
Shapiro, J.A.1
Huang, W.2
Zhang, C.3
Hubisz, M.J.4
Lu, J.5
-
6
-
-
68949202924
-
Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change
-
Eyre-Walker A, Keightley PD, (2009) Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change. Molecular Biology and Evolution 26: 2097–2108. doi: 10.1093/molbev/msp119 19535738
-
(2009)
Molecular Biology and Evolution
, vol.26
, pp. 2097-2108
-
-
Eyre-Walker, A.1
Keightley, P.D.2
-
7
-
-
67651050074
-
Pervasive natural selection in the Drosophila genome?
-
Sella G, Petrov DA, Przeworski M, Andolfatto P, (2009) Pervasive natural selection in the Drosophila genome? PLoS Genetics 5: e1000495. doi: 10.1371/journal.pgen.1000495 19503600
-
(2009)
PLoS Genetics
, vol.5
, pp. 1000495
-
-
Sella, G.1
Petrov, D.A.2
Przeworski, M.3
Andolfatto, P.4
-
8
-
-
83455176994
-
A method for inferring the rate of occurrence and fitness effects of advantageous mutations
-
Schneider A, Charlesworth B, Eyre-Walker A, Keightley PD, (2011) A method for inferring the rate of occurrence and fitness effects of advantageous mutations. Genetics 189: 1427–1437. doi: 10.1534/genetics.111.131730 21954160
-
(2011)
Genetics
, vol.189
, pp. 1427-1437
-
-
Schneider, A.1
Charlesworth, B.2
Eyre-Walker, A.3
Keightley, P.D.4
-
9
-
-
84876350995
-
A comparison of models to infer the distribution of fitness effects of new mutations
-
Kousathanas A, Keightley PD, (2013) A comparison of models to infer the distribution of fitness effects of new mutations. Genetics 193: 1197–1208. doi: 10.1534/genetics.112.148023 23341416
-
(2013)
Genetics
, vol.193
, pp. 1197-1208
-
-
Kousathanas, A.1
Keightley, P.D.2
-
10
-
-
37249036929
-
Genomewide spatial correspondence between nonsynonymous divergence and neutral polymorphism reveals extensive adaptation in Drosophila
-
Macpherson JM, Sella G, Davis JC, Petrov DA, (2007) Genomewide spatial correspondence between nonsynonymous divergence and neutral polymorphism reveals extensive adaptation in Drosophila. Genetics 177: 2083–2099. 18073425
-
(2007)
Genetics
, vol.177
, pp. 2083-2099
-
-
Macpherson, J.M.1
Sella, G.2
Davis, J.C.3
Petrov, D.A.4
-
11
-
-
79952263624
-
Pervasive adaptive protein evolution apparent in diversity patterns around amino acid substitutions in Drosophila simulans
-
Sattath S, Elyashiv E, Kolodny O, Rinott Y, Sella G, (2011) Pervasive adaptive protein evolution apparent in diversity patterns around amino acid substitutions in Drosophila simulans. PLoS Genetics 7: e1001302. doi: 10.1371/journal.pgen.1001302 21347283
-
(2011)
PLoS Genetics
, vol.7
, pp. 1001302
-
-
Sattath, S.1
Elyashiv, E.2
Kolodny, O.3
Rinott, Y.4
Sella, G.5
-
12
-
-
76749097550
-
The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation
-
Pritchard JK, Pickrell JK, Coop G, (2010) The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation. Current Biology 20: R208–215. doi: 10.1016/j.cub.2009.11.055 20178769
-
(2010)
Current Biology
, vol.20
, pp. 208-215
-
-
Pritchard, J.K.1
Pickrell, J.K.2
Coop, G.3
-
13
-
-
84875230189
-
Genomic signatures of selection at linked sites: unifying the disparity among species
-
Cutter AD, Payseur BA, (2013) Genomic signatures of selection at linked sites: unifying the disparity among species. Nature Reviews Genetics 14: 262–274. doi: 10.1038/nrg3425 23478346
-
(2013)
Nature Reviews Genetics
, vol.14
, pp. 262-274
-
-
Cutter, A.D.1
Payseur, B.A.2
-
14
-
-
84885911072
-
Population genomics of rapid adaptation by soft selective sweeps
-
Messer PW, Petrov DA, (2013) Population genomics of rapid adaptation by soft selective sweeps. Trends in Ecology & Evolution 28: 659–669.
-
(2013)
Trends in Ecology & Evolution
, vol.28
, pp. 659-669
-
-
Messer, P.W.1
Petrov, D.A.2
-
15
-
-
0028236031
-
Resistance-associated point mutations in insecticide-insensitive acetylcholinesterase
-
Mutero A, Pralavorio M, Bride JM, Fournier D, (1994) Resistance-associated point mutations in insecticide-insensitive acetylcholinesterase. Proceedings of the National Academy of Sciences of the United States of America 91: 5922–5926. 8016090
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, pp. 5922-5926
-
-
Mutero, A.1
Pralavorio, M.2
Bride, J.M.3
Fournier, D.4
-
16
-
-
2942560860
-
Mutations of acetylcholinesterase which confer insecticide resistance in Drosophila melanogaster populations
-
Menozzi P, Shi MA, Lougarre A, Tang ZH, Fournier D, (2004) Mutations of acetylcholinesterase which confer insecticide resistance in Drosophila melanogaster populations. BMC Evolutionary Biology 4: 4. 15018651
-
(2004)
BMC Evolutionary Biology
, vol.4
, pp. 4
-
-
Menozzi, P.1
Shi, M.A.2
Lougarre, A.3
Tang, Z.H.4
Fournier, D.5
-
17
-
-
77954167479
-
Evidence that adaptation in Drosophila is not limited by mutation at single sites
-
Karasov T, Messer PW, Petrov DA, (2010) Evidence that adaptation in Drosophila is not limited by mutation at single sites. PLoS Genetics 6: e1000924. doi: 10.1371/journal.pgen.1000924 20585551
-
(2010)
PLoS Genetics
, vol.6
, pp. 1000924
-
-
Karasov, T.1
Messer, P.W.2
Petrov, D.A.3
-
18
-
-
0035207207
-
DDT resistance in Drosophila correlates with Cyp6g1 over-expression and confers cross-resistance to the neonicotinoid imidacloprid
-
Daborn P, Boundy S, Yen J, Pittendrigh B, Ffrench-Constant R, (2001) DDT resistance in Drosophila correlates with Cyp6g1 over-expression and confers cross-resistance to the neonicotinoid imidacloprid. Molecular Genetics and Genomics 266: 556–563. 11810226
-
(2001)
Molecular Genetics and Genomics
, vol.266
, pp. 556-563
-
-
Daborn, P.1
Boundy, S.2
Yen, J.3
Pittendrigh, B.4
Ffrench-Constant, R.5
-
19
-
-
77957659569
-
Copy number variation and transposable elements feature in recent, ongoing adaptation at the Cyp6g1 locus
-
Schmidt JM, Good RT, Appleton B, Sherrard J, Raymant GC, et al. (2010) Copy number variation and transposable elements feature in recent, ongoing adaptation at the Cyp6g1 locus. PLoS Genetics 6: e1000998. doi: 10.1371/journal.pgen.1000998 20585622
-
(2010)
PLoS Genetics
, vol.6
, pp. 1000998
-
-
Schmidt, J.M.1
Good, R.T.2
Appleton, B.3
Sherrard, J.4
Raymant, G.C.5
-
20
-
-
23044509495
-
Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila
-
Aminetzach YT, Macpherson JM, Petrov DA, (2005) Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila. Science 309: 764–767. 16051794
-
(2005)
Science
, vol.309
, pp. 764-767
-
-
Aminetzach, Y.T.1
Macpherson, J.M.2
Petrov, D.A.3
-
21
-
-
80055085714
-
Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a Duplication
-
Magwire MM, Bayer F, Webster CL, Cao C, Jiggins FM, (2011) Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a Duplication. PLoS Genetics 7: e1002337. doi: 10.1371/journal.pgen.1002337 22028673
-
(2011)
PLoS Genetics
, vol.7
, pp. 1002337
-
-
Magwire, M.M.1
Bayer, F.2
Webster, C.L.3
Cao, C.4
Jiggins, F.M.5
-
22
-
-
0016220238
-
The hitch-hiking effect of a favourable gene
-
Maynard Smith J, Haigh J, (1974) The hitch-hiking effect of a favourable gene. Genetical Research 23: 23–35. 4407212
-
(1974)
Genetical Research
, vol.23
, pp. 23-35
-
-
Maynard Smith, J.1
Haigh, J.2
-
24
-
-
0036189827
-
Detecting a local signature of genetic hitchhiking along a recombining chromosome
-
Kim Y, Stephan W, (2002) Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765–777. 11861577
-
(2002)
Genetics
, vol.160
, pp. 765-777
-
-
Kim, Y.1
Stephan, W.2
-
25
-
-
0035109378
-
Haldane’s sieve and adaptation from the standing genetic variation
-
Orr HA, Betancourt AJ, (2001) Haldane’s sieve and adaptation from the standing genetic variation. Genetics 157: 875–884. 11157004
-
(2001)
Genetics
, vol.157
, pp. 875-884
-
-
Orr, H.A.1
Betancourt, A.J.2
-
27
-
-
18844439645
-
Soft sweeps: molecular population genetics of adaptation from standing genetic variation
-
Hermisson J, Pennings PS, (2005) Soft sweeps: molecular population genetics of adaptation from standing genetic variation. Genetics 169: 2335–2352. 15716498
-
(2005)
Genetics
, vol.169
, pp. 2335-2352
-
-
Hermisson, J.1
Pennings, P.S.2
-
28
-
-
28644440530
-
The signature of positive selection on standing genetic variation
-
Przeworski M, Coop G, Wall JD, (2005) The signature of positive selection on standing genetic variation. Evolution 59: 2312–2323. 16396172
-
(2005)
Evolution
, vol.59
, pp. 2312-2323
-
-
Przeworski, M.1
Coop, G.2
Wall, J.D.3
-
29
-
-
33646592536
-
Soft sweeps II—molecular population genetics of adaptation from recurrent mutation or migration
-
Pennings PS, Hermisson J, (2006) Soft sweeps II—molecular population genetics of adaptation from recurrent mutation or migration. Molecular Biology and Evolution 23: 1076–1084. 16520336
-
(2006)
Molecular Biology and Evolution
, vol.23
, pp. 1076-1084
-
-
Pennings, P.S.1
Hermisson, J.2
-
30
-
-
84899542092
-
On detecting incomplete soft or hard selective sweeps using haplotype structure
-
Ferrer-Admetlla A, Liang M, Korneliussen T, Nielsen R, (2014) On detecting incomplete soft or hard selective sweeps using haplotype structure. Molecular Biology and Evolution 31: 1275–1291. doi: 10.1093/molbev/msu077 24554778
-
(2014)
Molecular Biology and Evolution
, vol.31
, pp. 1275-1291
-
-
Ferrer-Admetlla, A.1
Liang, M.2
Korneliussen, T.3
Nielsen, R.4
-
31
-
-
0026529344
-
Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster
-
Begun DJ, Aquadro CF, (1992) Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. Nature 356: 519–520. 1560824
-
(1992)
Nature
, vol.356
, pp. 519-520
-
-
Begun, D.J.1
Aquadro, C.F.2
-
32
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F, (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585–595. 2513255
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
33
-
-
0029036829
-
The hitchhiking effect on the site frequency spectrum of DNA polymorphisms
-
Braverman JM, Hudson RR, Kaplan NL, Langley CH, Stephan W, (1995) The hitchhiking effect on the site frequency spectrum of DNA polymorphisms. Genetics 140: 783–796. 7498754
-
(1995)
Genetics
, vol.140
, pp. 783-796
-
-
Braverman, J.M.1
Hudson, R.R.2
Kaplan, N.L.3
Langley, C.H.4
Stephan, W.5
-
34
-
-
0033911640
-
Hitchhiking under positive Darwinian selection
-
Fay JC, Wu CI, (2000) Hitchhiking under positive Darwinian selection. Genetics 155: 1405–1413. 10880498
-
(2000)
Genetics
, vol.155
, pp. 1405-1413
-
-
Fay, J.C.1
Wu, C.I.2
-
35
-
-
27544437635
-
Genomic scans for selective sweeps using SNP data
-
Nielsen R, Williamson S, Kim Y, Hubisz MJ, Clark AG, et al. (2005) Genomic scans for selective sweeps using SNP data. Genome Research 15: 1566–1575. 16251466
-
(2005)
Genome Research
, vol.15
, pp. 1566-1575
-
-
Nielsen, R.1
Williamson, S.2
Kim, Y.3
Hubisz, M.J.4
Clark, A.G.5
-
36
-
-
84888582669
-
Detecting natural selection in genomic data
-
Vitti JJ, Grossman SR, Sabeti PC, (2013) Detecting natural selection in genomic data. Annual Review of Genetics 47: 97–120. doi: 10.1146/annurev-genet-111212-133526 24274750
-
(2013)
Annual Review of Genetics
, vol.47
, pp. 97-120
-
-
Vitti, J.J.1
Grossman, S.R.2
Sabeti, P.C.3
-
37
-
-
0028215929
-
Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster
-
Hudson RR, Bailey K, Skarecky D, Kwiatowski J, Ayala FJ, (1994) Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster. Genetics 136: 1329–1340. 8013910
-
(1994)
Genetics
, vol.136
, pp. 1329-1340
-
-
Hudson, R.R.1
Bailey, K.2
Skarecky, D.3
Kwiatowski, J.4
Ayala, F.J.5
-
38
-
-
0031773191
-
Neutrality tests based on the distribution of haplotypes under an infinite-site model
-
Depaulis F, Veuille M, (1998) Neutrality tests based on the distribution of haplotypes under an infinite-site model. Molecular Biology and Evolution 15: 1788–1790. 9917213
-
(1998)
Molecular Biology and Evolution
, vol.15
, pp. 1788-1790
-
-
Depaulis, F.1
Veuille, M.2
-
39
-
-
0037167852
-
Detecting recent positive selection in the human genome from haplotype structure
-
Sabeti PC, Reich DE, Higgins JM, Levine HZ, Richter DJ, et al. (2002) Detecting recent positive selection in the human genome from haplotype structure. Nature 419: 832–837. 12397357
-
(2002)
Nature
, vol.419
, pp. 832-837
-
-
Sabeti, P.C.1
Reich, D.E.2
Higgins, J.M.3
Levine, H.Z.4
Richter, D.J.5
-
40
-
-
33644981509
-
A map of recent positive selection in the human genome
-
Voight BF, Kudaravalli S, Wen X, Pritchard JK, (2006) A map of recent positive selection in the human genome. PLoS Biology 4: e72. 16494531
-
(2006)
PLoS Biology
, vol.4
, pp. 72
-
-
Voight, B.F.1
Kudaravalli, S.2
Wen, X.3
Pritchard, J.K.4
-
41
-
-
33845971545
-
Soft sweeps III: the signature of positive selection from recurrent mutation
-
Pennings PS, Hermisson J, (2006) Soft sweeps III: the signature of positive selection from recurrent mutation. PLoS Genetics 2: e186. 17173482
-
(2006)
PLoS Genetics
, vol.2
, pp. 186
-
-
Pennings, P.S.1
Hermisson, J.2
-
42
-
-
33744815615
-
How reliable are empirical genomic scans for selective sweeps?
-
Teshima KM, Coop G, Przeworski M, (2006) How reliable are empirical genomic scans for selective sweeps? Genome Research 16: 702–712. 16687733
-
(2006)
Genome Research
, vol.16
, pp. 702-712
-
-
Teshima, K.M.1
Coop, G.2
Przeworski, M.3
-
43
-
-
84855216527
-
The effect of recurrent mutation on the linkage disequilibrium under a selective sweep
-
Pokalyuk C, (2012) The effect of recurrent mutation on the linkage disequilibrium under a selective sweep. Journal of Mathematical Biology 64: 291–317. doi: 10.1007/s00285-011-0411-y 21359840
-
(2012)
Journal of Mathematical Biology
, vol.64
, pp. 291-317
-
-
Pokalyuk, C.1
-
44
-
-
84863012360
-
The Drosophila melanogaster Genetic Reference Panel
-
Mackay TF, Richards S, Stone EA, Barbadilla A, Ayroles JF, et al. (2012) The Drosophila melanogaster Genetic Reference Panel. Nature 482: 173–178. doi: 10.1038/nature10811 22318601
-
(2012)
Nature
, vol.482
, pp. 173-178
-
-
Mackay, T.F.1
Richards, S.2
Stone, E.A.3
Barbadilla, A.4
Ayroles, J.F.5
-
45
-
-
84871785145
-
Demographic inference reveals African and European admixture in the North American Drosophila melanogaster population
-
Duchen P, Zivkovic D, Hutter S, Stephan W, Laurent S, (2013) Demographic inference reveals African and European admixture in the North American Drosophila melanogaster population. Genetics 193: 291–301. doi: 10.1534/genetics.112.145912 23150605
-
(2013)
Genetics
, vol.193
, pp. 291-301
-
-
Duchen, P.1
Zivkovic, D.2
Hutter, S.3
Stephan, W.4
Laurent, S.5
-
46
-
-
33644763127
-
Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster
-
Thornton K, Andolfatto P, (2006) Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster. Genetics 172: 1607–1619. 16299396
-
(2006)
Genetics
, vol.172
, pp. 1607-1619
-
-
Thornton, K.1
Andolfatto, P.2
-
47
-
-
73449149044
-
Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
-
Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD, (2009) Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS Genetics 5: e1000695. doi: 10.1371/journal.pgen.1000695 19851460
-
(2009)
PLoS Genetics
, vol.5
, pp. 1000695
-
-
Gutenkunst, R.N.1
Hernandez, R.D.2
Williamson, S.H.3
Bustamante, C.D.4
-
48
-
-
67650064592
-
Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines
-
Keightley PD, Trivedi U, Thomson M, Oliver F, Kumar S, et al. (2009) Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines. Genome Research 19: 1195–1201. doi: 10.1101/gr.091231.109 19439516
-
(2009)
Genome Research
, vol.19
, pp. 1195-1201
-
-
Keightley, P.D.1
Trivedi, U.2
Thomson, M.3
Oliver, F.4
Kumar, S.5
-
49
-
-
84868143643
-
The many landscapes of recombination in Drosophila melanogaster
-
Comeron JM, Ratnappan R, Bailin S, (2012) The many landscapes of recombination in Drosophila melanogaster. PLoS Genetics 8: e1002905. doi: 10.1371/journal.pgen.1002905 23071443
-
(2012)
PLoS Genetics
, vol.8
, pp. 1002905
-
-
Comeron, J.M.1
Ratnappan, R.2
Bailin, S.3
-
50
-
-
0035107520
-
Recombination and the frequency spectrum in Drosophila melanogaster and Drosophila simulans
-
Przeworski M, Wall JD, Andolfatto P, (2001) Recombination and the frequency spectrum in Drosophila melanogaster and Drosophila simulans. Molecular Biology and Evolution 18: 291–298. 11230530
-
(2001)
Molecular Biology and Evolution
, vol.18
, pp. 291-298
-
-
Przeworski, M.1
Wall, J.D.2
Andolfatto, P.3
-
52
-
-
84908052687
-
Soft selective sweeps in complex demographic scenarios
-
Wilson BA, Petrov DA, Messer PW, (2014) Soft selective sweeps in complex demographic scenarios. Genetics 198: 669–684. doi: 10.1534/genetics.114.165571 25060100
-
(2014)
Genetics
, vol.198
, pp. 669-684
-
-
Wilson, B.A.1
Petrov, D.A.2
Messer, P.W.3
-
53
-
-
84862508204
-
Estimating the strength of selective sweeps from deep population diversity data
-
Messer PW, Neher RA, (2012) Estimating the strength of selective sweeps from deep population diversity data. Genetics 191: 593–605. doi: 10.1534/genetics.112.138461 22491190
-
(2012)
Genetics
, vol.191
, pp. 593-605
-
-
Messer, P.W.1
Neher, R.A.2
-
55
-
-
84903452150
-
Background selection as baseline for nucleotide variation across the Drosophila genome
-
Comeron JM, (2014) Background selection as baseline for nucleotide variation across the Drosophila genome. PLoS Genetics 10: e1004434. doi: 10.1371/journal.pgen.1004434 24968283
-
(2014)
PLoS Genetics
, vol.10
, pp. 1004434
-
-
Comeron, J.M.1
-
56
-
-
84901393253
-
Genome-wide signals of positive selection in human evolution
-
Enard D, Messer PW, Petrov DA, (2014) Genome-wide signals of positive selection in human evolution. Genome Research 24: 885–895. doi: 10.1101/gr.164822.113 24619126
-
(2014)
Genome Research
, vol.24
, pp. 885-895
-
-
Enard, D.1
Messer, P.W.2
Petrov, D.A.3
-
57
-
-
84901459944
-
Exploring the occurrence of classic selective sweeps in humans using whole-genome sequencing data sets
-
Fagny M, Patin E, Enard D, Barreiro LB, Quintana-Murci L, et al. (2014) Exploring the occurrence of classic selective sweeps in humans using whole-genome sequencing data sets. Molecular Biology and Evolution 31: 1850–1868. doi: 10.1093/molbev/msu118 24694833
-
(2014)
Molecular Biology and Evolution
, vol.31
, pp. 1850-1868
-
-
Fagny, M.1
Patin, E.2
Enard, D.3
Barreiro, L.B.4
Quintana-Murci, L.5
-
58
-
-
78951480118
-
Parallel adaptation: one or many waves of advance of an advantageous allele?
-
Ralph P, Coop G, (2010) Parallel adaptation: one or many waves of advance of an advantageous allele? Genetics 186: 647–668. doi: 10.1534/genetics.110.119594 20660645
-
(2010)
Genetics
, vol.186
, pp. 647-668
-
-
Ralph, P.1
Coop, G.2
-
59
-
-
0026428610
-
Adaptive protein evolution at the Adh locus in Drosophila
-
McDonald JH, Kreitman M, (1991) Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652–654. 1904993
-
(1991)
Nature
, vol.351
, pp. 652-654
-
-
McDonald, J.H.1
Kreitman, M.2
-
60
-
-
38849194141
-
Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome
-
Andolfatto P, (2007) Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome. Genome Research 17: 1755–1762. 17989248
-
(2007)
Genome Research
, vol.17
, pp. 1755-1762
-
-
Andolfatto, P.1
-
61
-
-
77955381733
-
MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus
-
Ewing G, Hermisson J, (2010) MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus. Bioinformatics 26: 2064–2065. doi: 10.1093/bioinformatics/btq322 20591904
-
(2010)
Bioinformatics
, vol.26
, pp. 2064-2065
-
-
Ewing, G.1
Hermisson, J.2
-
62
-
-
77952800173
-
On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila
-
Parsch J, Novozhilov S, Saminadin-Peter SS, Wong KM, Andolfatto P, (2010) On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila. Molecular Biology and Evolution 27: 1226–1234. doi: 10.1093/molbev/msq046 20150340
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 1226-1234
-
-
Parsch, J.1
Novozhilov, S.2
Saminadin-Peter, S.S.3
Wong, K.M.4
Andolfatto, P.5
-
63
-
-
84878486976
-
Strong purifying selection at synonymous sites in D. melanogaster
-
Lawrie DS, Messer PW, Hershberg R, Petrov DA, (2013) Strong purifying selection at synonymous sites in D. melanogaster. PLoS Genetics 9: e1003527. doi: 10.1371/journal.pgen.1003527 23737754
-
(2013)
PLoS Genetics
, vol.9
, pp. 1003527
-
-
Lawrie, D.S.1
Messer, P.W.2
Hershberg, R.3
Petrov, D.A.4
-
64
-
-
33750491918
-
Inferring the demographic history and rate of adaptive substitution in Drosophila
-
Li H, Stephan W, (2006) Inferring the demographic history and rate of adaptive substitution in Drosophila. PLoS Genetics 2: e166. 17040129
-
(2006)
PLoS Genetics
, vol.2
, pp. 166
-
-
Li, H.1
Stephan, W.2
|