Recombination and the frequency spectrum in Drosophila melanogaster and Drosophila simulans

Molecular Biology and Evolution

Volumn 18, Issue 3, 2001, Pages 291-298

  Przeworski, Molly ^a   Wall, Jeffrey D ^b   Andolfatto, Peter ^c  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b HARVARD UNIVERSITY   (United States)

^c UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

Drosophila; Frequency spectrum; Neutral model; Recombination

Indexed keywords

ARTICLE; CROSSING OVER; DNA POLYMORPHISM; DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS; GENE LOCUS; GENETIC RECOMBINATION; NATURAL SELECTION; NONHUMAN;

DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS; MELANOGASTER;

EID: 0035107520     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a003805     Document Type: Article

References (64)

1. Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA
2. Inferring the fitness effects of DNA mutations from polymorphism and divergence data: Statistical power to detect directional selection under stationarity and free recombination
3. Molecular variation at the In(2L)t proximal breakpoint site in natural populations of Drosophila melanogaster and D. simulans
4. The effect of gene conversion on intralocus associations
5. A genome-wide departure from the standard neutral model in natural populations of Drosophila
6. Unusual haplotype structure at the proximal breakpoint of In(2L)t in a natural population of Drosophila melanogaster
7. Molecular evolution of the Rh3 gene in Drosophila
8. Molecular drift of the bride of sevenless (boss) gene in Drosophila
9. African and North American populations of Drosophila melanogaster are very different at the DNA level
10. Evolutionary inferences from DNA variation at the 6-Phosphogluconate Dehydrogenase locus in natural populations of Drosophila - Selection and geographic differentiation
11. Molecular variation at the vermilion locus in geographically diverse populations of Drosophila melanogaster and Drosophila simulans
12. The hitchhiking effect on the site frequency spectrum of DNA polymorphisms
13. Background selection and patterns of genetic diversity in Drosophila melanogaster
14. The effect of deleterious mutations on neutral molecular variation
15. Evolutionary history of the sex-peptide (Acp70A) gene region in Drosophila melanogaster
16. Molecular population genetics of Drosophila immune system genes
17. Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila
18. Amino acid polymorphisms for Esterase 6 in Drosophila melanogaster
19. Genetic variation of Drosophila melanogaster natural populations
20. Evidence for adaptive evolution of the G6pd gene in Drosophila melanogaster and D. simulans
21. New statistical tests of neutrality for DNA samples from a population
22. Mitochondrial DNA variation and genetic structure in populations of Drosophila melanogaster
23. High nucleotide sequence variation in a region of low recombination in Drosophila simulans in consistent with background selection
24. Contrasting patterns of nucleotide sequence variation at the glucose dehydrogenase (Gld) locus in different populations of Drosophila melanogaster
25. Population structure among African and derived populations of Drosophila simulans: Evidence for ancient subdivision and recent admixture
26. Contrasting histories of three gene regions associated with In(3L)Payne of Drosophila melanogaster
27. Nucleotide variation in the Triose Phosphate Isomerase (Tpi) locus of Drosophila melanogaster and D. simulans
28. Population genetics and phylogenetics of DNA sequence variation at multiple loci within the Drosophila melanogaster species complex
29. Properties of a neutral allele model with intragenic recombination
30. Gene genealogies and the coalescent process
31. The how and why of generating gene genealogies
32. Statistical properties of the number of recombination events in the history of a sample of DNA sequences
33. DNA variation at the Sod locus of Drosophila melanogaster: An unfolding story of natural selection
34. Evolutionary relationships and sequence variation of alpha-Amylase variants encoded by duplicated genes in the Amy locus of Drosophila melanogaster
35. A test of neutrality based on interlocus associations
36. The rate of molecular evolution considered from the standpoint of population genetics
37. Multi-locus selection and the structure of variation at the white gene of Drosophila melanogaster
38. DNA sequence variation at the period locus within and among species of the Drosophila melanogaster complex
39. Nucleotide polymorphism at the Alcohol dehydrogenase locus of Drosophila melanogaster
40. Nucleotide variation at the runt locus in Drosophila melanogaster and D. simulans
41. Historical biogeography of the Drosophila melanogaster species subgroup
42. Constraints on intron evolution in the gene encoding the myosin alkali light chain in Drosophila
43. Evolutionary dynamics of the enhancer regions of even-skipped in Drosophila
44. The effects of Hill-Robertson interference between weakly selected mutations on patterns of molecular evolution and variation
45. Intraspecific nuclear DNA variation in Drosophila
46. The genealogy of samples in models with selection
47. Slightly deleterious mutant substitutions in evolution
48. Rapid evolution of a coadapted gene complex: Evidence from the Segregation Distorter (SD) system of meiotic drive in Drosophila melanogaster
49. Genealogies and weak purifying selection
50. Nucleotide variation and conservation of the dpp locus, a gene controlling early development in Drosophila
51. Population genetics of polymorphism and divergence
52. On the rate of DNA sequence evolution in Drosophila
53. Molecular evolution in a multisite nearly neutral model
54. Statistical methods for testing the neutral mutation hypothesis by DNA polymorphism
55. The effect of change in population size on DNA polymorphism
56. Differences in crossover frequency and distribution among three sibling species of Drosophila
57. Positive selection driving the evolution of a gene of male reproduction, Acp26Aa, of Drosophila: II. Divergence versus polymorphism
58. Recombination and the power of statistical tests of neutrality
59. Molecular population genetics of ref(2)P, a locus which confers viral resistance in Drosophila
60. Isolation and analysis of the breakpoint sequences of chromosome inversion In(3L)Payne in Drosophila melanogaster