메뉴 건너뛰기




Volumn 190, Issue 6, 2014, Pages 656-664

A functional synonymous coding variant in the IL1RN gene is associated with survival in septic shock

Author keywords

Functional genetic variant; Polymorphism; RNA seq; Septic shock

Indexed keywords

ENDOTOXIN; INTERLEUKIN 1 RECEPTOR; INTERLEUKIN 1 RECEPTOR BLOCKING AGENT; INTERLEUKIN 1 RECEPTOR N; LIPOPOLYSACCHARIDE; NORADRENALIN; RNA; UNCLASSIFIED DRUG; VASOPRESSIN; IL1RN PROTEIN, HUMAN;

EID: 84921633275     PISSN: 1073449X     EISSN: 15354970     Source Type: Journal    
DOI: 10.1164/rccm.201403-0586OC     Document Type: Article
Times cited : (45)

References (70)
  • 3
    • 70350580290 scopus 로고    scopus 로고
    • Initiation of inappropriate antimicrobial therapy results in a fivefold reduction of survival in human septic shock
    • Kumar A, Ellis P, Arabi Y, Roberts D, Light B, Parrillo JE, Dodek P, Wood G, Kumar A, Simon D, et al.; Cooperative Antimicrobial Therapy of Septic Shock Database Research Group. Initiation of inappropriate antimicrobial therapy results in a fivefold reduction of survival in human septic shock. Chest 2009;136:1237-1248.
    • (2009) Chest , vol.136 , pp. 1237-1248
    • Kumar, A.1    Ellis, P.2    Arabi, Y.3    Roberts, D.4    Light, B.5    Parrillo, J.E.6    Dodek, P.7    Wood, G.8    Kumar, A.9    Simon, D.10
  • 6
    • 84866908879 scopus 로고    scopus 로고
    • Identification of sepsis subtypes in critically ill adults using gene expression profiling
    • Maslove DM, Tang BM, McLean AS. Identification of sepsis subtypes in critically ill adults using gene expression profiling. Crit Care 2012;16:R183.
    • (2012) Crit Care , vol.16 , pp. R183
    • Maslove, D.M.1    Tang, B.M.2    McLean, A.S.3
  • 7
    • 0027457502 scopus 로고
    • Serum cytokine levels in human septic shock. Relation to multiple-system organ failure and mortality
    • Pinsky MR, Vincent JL, Deviere J, Alegre M, Kahn RJ, Dupont E. Serum cytokine levels in human septic shock. Relation to multiple-system organ failure and mortality. Chest 1993;103:565-575.
    • (1993) Chest , vol.103 , pp. 565-575
    • Pinsky, M.R.1    Vincent, J.L.2    Deviere, J.3    Alegre, M.4    Kahn, R.J.5    Dupont, E.6
  • 10
    • 0027731546 scopus 로고
    • Plasma cytokine and endotoxin levels correlate with survival in patients with the sepsis syndrome
    • Casey LC, Balk RA, Bone RC. Plasma cytokine and endotoxin levels correlate with survival in patients with the sepsis syndrome. Ann Intern Med 1993;119:771-778.
    • (1993) Ann Intern Med , vol.119 , pp. 771-778
    • Casey, L.C.1    Balk, R.A.2    Bone, R.C.3
  • 14
    • 0026747612 scopus 로고
    • Effect of interleukin-1 (IL-1) blockade on cytokine synthesis. II. IL-1 receptor antagonist inhibits lipopolysaccharide-induced cytokine synthesis by human monocytes
    • Granowitz EV, Vannier E, Poutsiaka DD, Dinarello CA. Effect of interleukin-1 (IL-1) blockade on cytokine synthesis. II. IL-1 receptor antagonist inhibits lipopolysaccharide-induced cytokine synthesis by human monocytes. Blood 1992;79:2364-2369.
    • (1992) Blood , vol.79 , pp. 2364-2369
    • Granowitz, E.V.1    Vannier, E.2    Poutsiaka, D.D.3    Dinarello, C.A.4
  • 15
    • 0026638566 scopus 로고
    • Effect of interleukin-1 (IL-1) blockade on cytokine synthesis. I. IL-1 receptor antagonist inhibits IL-1-induced cytokine synthesis and blocks the binding of IL-1 to its type II receptor on human monocytes
    • Granowitz EV, Clark BD, Vannier E, Callahan MV, Dinarello CA. Effect of interleukin-1 (IL-1) blockade on cytokine synthesis. I. IL-1 receptor antagonist inhibits IL-1-induced cytokine synthesis and blocks the binding of IL-1 to its type II receptor on human monocytes. Blood 1992;79:2356-2363.
    • (1992) Blood , vol.79 , pp. 2356-2363
    • Granowitz, E.V.1    Clark, B.D.2    Vannier, E.3    Callahan, M.V.4    Dinarello, C.A.5
  • 17
    • 0012382804 scopus 로고    scopus 로고
    • Comparison of two polymorphisms of the interleukin-1 gene family: Interleukin-1 receptor antagonist polymorphism contributes to susceptibility to severe sepsis
    • Fang XM, Schröder S, Hoeft A, Stüber F. Comparison of two polymorphisms of the interleukin-1 gene family: interleukin-1 receptor antagonist polymorphism contributes to susceptibility to severe sepsis. Crit Care Med 1999;27:1330-1334.
    • (1999) Crit Care Med , vol.27 , pp. 1330-1334
    • Fang, X.M.1    Schröder, S.2    Hoeft, A.3    Stüber, F.4
  • 18
    • 0036250135 scopus 로고    scopus 로고
    • Genomic polymorphism within interleukin-1 family cytokines influences the outcome of septic patients
    • Ma P, Chen D, Pan J, Du B. Genomic polymorphism within interleukin-1 family cytokines influences the outcome of septic patients. Crit Care Med 2002;30:1046-1050.
    • (2002) Crit Care Med , vol.30 , pp. 1046-1050
    • Ma, P.1    Chen, D.2    Pan, J.3    Du, B.4
  • 19
    • 0028913484 scopus 로고
    • Cytokine production by normal human monocytes: Inter-subject variation and relationship to an IL-1 receptor antagonist (IL-1Ra) gene polymorphism
    • Danis VA, Millington M, Hyland VJ, Grennan D. Cytokine production by normal human monocytes: inter-subject variation and relationship to an IL-1 receptor antagonist (IL-1Ra) gene polymorphism. Clin Exp Immunol 1995;99:303-310.
    • (1995) Clin Exp Immunol , vol.99 , pp. 303-310
    • Danis, V.A.1    Millington, M.2    Hyland, V.J.3    Grennan, D.4
  • 22
    • 79951828169 scopus 로고    scopus 로고
    • The IL1RN promoter rs4251961 correlates with IL-1 receptor antagonist concentrations in human infection and is differentially regulated by GATA-1
    • Carrol ED, Payton A, Payne D, Miyajima F, Chaponda M, Mankhambo LA, Banda DL, Molyneux EM, Cox H, Jacobson G, et al. The IL1RN promoter rs4251961 correlates with IL-1 receptor antagonist concentrations in human infection and is differentially regulated by GATA-1. J Immunol 2011;186:2329-2335.
    • (2011) J Immunol , vol.186 , pp. 2329-2335
    • Carrol, E.D.1    Payton, A.2    Payne, D.3    Miyajima, F.4    Chaponda, M.5    Mankhambo, L.A.6    Banda, D.L.7    Molyneux, E.M.8    Cox, H.9    Jacobson, G.10
  • 26
    • 84929150370 scopus 로고    scopus 로고
    • IL1rn coding SNP is associated with decreased interleukin-1 beta and decreased mortality in the VASST septic shock cohort
    • abstract
    • Meyer NJ, Russell JA, Christie JD, Walley KR. IL1rn coding SNP is associated with decreased interleukin-1 beta and decreased mortality in the VASST septic shock cohort [abstract]. Am J Respir Crit Care Med 2013;187:A1010.
    • (2013) Am J Respir Crit Care Med , vol.187 , pp. A1010
    • Meyer, N.J.1    Russell, J.A.2    Christie, J.D.3    Walley, K.R.4
  • 33
    • 0001789775 scopus 로고    scopus 로고
    • The Brussels score
    • Bernard G. The Brussels score. Sepsis 1997;1:43-44.
    • (1997) Sepsis , vol.1 , pp. 43-44
    • Bernard, G.1
  • 35
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad BM, Irizarry RA, Astrand M, Speed TP. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 2003;19:185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 39
    • 84865790047 scopus 로고    scopus 로고
    • An integrated encyclopedia of DNA elements in the human genome
    • ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature 2012;489:57-74.
    • (2012) Nature , vol.489 , pp. 57-74
  • 42
    • 65149103048 scopus 로고    scopus 로고
    • Constructing genomic maps of positive selection in humans: Where do we go from here?
    • Akey JM. Constructing genomic maps of positive selection in humans: where do we go from here? Genome Res 2009;19:711-722.
    • (2009) Genome Res , vol.19 , pp. 711-722
    • Akey, J.M.1
  • 43
    • 34249040814 scopus 로고    scopus 로고
    • The molecular signature of selection underlying human adaptations
    • Harris EE, Meyer D. The molecular signature of selection underlying human adaptations. Am J Phys Anthropol 2006;131:89-130.
    • (2006) Am J Phys Anthropol , vol.131 , pp. 89-130
    • Harris, E.E.1    Meyer, D.2
  • 46
    • 67349226308 scopus 로고    scopus 로고
    • Cytokine SNPs: Comparison of allele frequencies by race and implications for future studies
    • Van Dyke AL, Cote ML, Wenzlaff AS, Land S, Schwartz AG. Cytokine SNPs: Comparison of allele frequencies by race and implications for future studies. Cytokine 2009;46:236-244.
    • (2009) Cytokine , vol.46 , pp. 236-244
    • Van Dyke, A.L.1    Cote, M.L.2    Wenzlaff, A.S.3    Land, S.4    Schwartz, A.G.5
  • 47
    • 77956978000 scopus 로고    scopus 로고
    • Genetic variation of the interleukin-1 family and nongenetic factors determining the interleukin-1 receptor antagonist phenotypes
    • Luotola K, Pietilä A, Alanne M, Lanki T, Loo B-M, Jula A, Perola M, Peters A, Zeller T, Blankenberg S, et al.; Health 2000, FINRISK97, and AIRGENE Study Groups. Genetic variation of the interleukin-1 family and nongenetic factors determining the interleukin-1 receptor antagonist phenotypes. Metabolism 2010;59:1520-1527.
    • (2010) Metabolism , vol.59 , pp. 1520-1527
    • Luotola, K.1    Pietilä, A.2    Alanne, M.3    Lanki, T.4    Loo, B.-M.5    Jula, A.6    Perola, M.7    Peters, A.8    Zeller, T.9    Blankenberg, S.10
  • 49
    • 77954763156 scopus 로고    scopus 로고
    • Genome-wide allele-specific analysis: Insights into regulatory variation
    • Pastinen T. Genome-wide allele-specific analysis: insights into regulatory variation. Nat Rev Genet 2010;11:533-538.
    • (2010) Nat Rev Genet , vol.11 , pp. 533-538
    • Pastinen, T.1
  • 51
    • 0023201153 scopus 로고
    • Interleukin 1 induces interleukin 1. I. Induction of circulating interleukin 1 in rabbits in vivo and in human mononuclear cells in vitro
    • Dinarello CA, Ikejima T, Warner SJ, Orencole SF, Lonnemann G, Cannon JG, Libby P. Interleukin 1 induces interleukin 1. I. Induction of circulating interleukin 1 in rabbits in vivo and in human mononuclear cells in vitro. J Immunol 1987;139:1902-1910.
    • (1987) J Immunol , vol.139 , pp. 1902-1910
    • Dinarello, C.A.1    Ikejima, T.2    Warner, S.J.3    Orencole, S.F.4    Lonnemann, G.5    Cannon, J.G.6    Libby, P.7
  • 52
    • 0029979369 scopus 로고    scopus 로고
    • Biologic basis for interleukin-1 in disease
    • Dinarello CA. Biologic basis for interleukin-1 in disease. Blood 1996;87:2095-2147.
    • (1996) Blood , vol.87 , pp. 2095-2147
    • Dinarello, C.A.1
  • 53
    • 0026772736 scopus 로고
    • Interleukin-1 receptor blockade improves survival and hemodynamic performance in Escherichia coli septic shock, but fails to alter host responses to sublethal endotoxemia
    • Fischer E, Marano MA, Van Zee KJ, Rock CS, Hawes AS, Thompson WA, DeForge L, Kenney JS, Remick DG, Bloedow DC, et al. Interleukin-1 receptor blockade improves survival and hemodynamic performance in Escherichia coli septic shock, but fails to alter host responses to sublethal endotoxemia. J Clin Invest 1992;89:1551-1557.
    • (1992) J Clin Invest , vol.89 , pp. 1551-1557
    • Fischer, E.1    Marano, M.A.2    Van Zee, K.J.3    Rock, C.S.4    Hawes, A.S.5    Thompson, W.A.6    DeForge, L.7    Kenney, J.S.8    Remick, D.G.9    Bloedow, D.C.10
  • 54
    • 0028018567 scopus 로고
    • Initial evaluation of human recombinant interleukin-1 receptor antagonist in the treatment of sepsis syndrome: A randomized, open-label, placebo-controlled multicenter trial
    • Fisher CJ Jr, Slotman GJ, Opal SM, Pribble JP, Bone RC, Emmanuel G, Ng D, Bloedow DC, Catalano MA; IL-1RA Sepsis Syndrome Study Group. Initial evaluation of human recombinant interleukin-1 receptor antagonist in the treatment of sepsis syndrome: a randomized, open-label, placebo-controlled multicenter trial. Crit Care Med 1994;22:12-21.
    • (1994) Crit Care Med , vol.22 , pp. 12-21
    • Fisher, C.J.1    Slotman, G.J.2    Opal, S.M.3    Pribble, J.P.4    Bone, R.C.5    Emmanuel, G.6    Ng, D.7    Bloedow, D.C.8    Catalano, M.A.9
  • 55
    • 33846112470 scopus 로고    scopus 로고
    • VISTA Enhancer Browser - A database of tissue-specific human enhancers
    • Visel A, Minovitsky S, Dubchak I, Pennacchio LA. VISTA Enhancer Browser - a database of tissue-specific human enhancers. Nucleic Acids Res 2007;35:D88-D92.
    • (2007) Nucleic Acids Res , vol.35 , pp. D88-D92
    • Visel, A.1    Minovitsky, S.2    Dubchak, I.3    Pennacchio, L.A.4
  • 57
    • 84899415536 scopus 로고    scopus 로고
    • CTCF: An architectural protein bridging genome topology and function
    • Ong C-T, Corces VG. CTCF: an architectural protein bridging genome topology and function. Nat Rev Genet 2014;15:234-246.
    • (2014) Nat Rev Genet , vol.15 , pp. 234-246
    • Ong, C.-T.1    Corces, V.G.2
  • 59
    • 84929218729 scopus 로고    scopus 로고
    • updated May; accessed 2014 Aug 22 Available from
    • Gauderman WJ, Morrison J. Quanto v1.2.4 [updated 2009 May; accessed 2014 Aug 22]. Available from: http://biostats.usc.edu/Quanto.html
    • (2009) Quanto V1.2.4
    • Gauderman, W.J.1    Morrison, J.2
  • 61
    • 84856152644 scopus 로고    scopus 로고
    • Homology in systemic neutrophil response induced by human experimental endotoxemia and by trauma
    • Visser T, Pillay J, Pickkers P, Leenen LP, Koenderman L. Homology in systemic neutrophil response induced by human experimental endotoxemia and by trauma. Shock 2012;37:145-151.
    • (2012) Shock , vol.37 , pp. 145-151
    • Visser, T.1    Pillay, J.2    Pickkers, P.3    Leenen, L.P.4    Koenderman, L.5
  • 64
    • 0028239555 scopus 로고
    • Recombinant human interleukin 1 receptor antagonist in the treatment of patients with sepsis syndrome: Results from a randomized, double-blind, placebo-controlled trial
    • Phase III rhIL-1ra Sepsis Syndrome Study Group
    • Fisher CJ Jr, Dhainaut JF, Opal SM, Pribble JP, Balk RA, Slotman GJ, Iberti TJ, Rackow EC, Shapiro MJ, Greenman RL, et al. Recombinant human interleukin 1 receptor antagonist in the treatment of patients with sepsis syndrome: results from a randomized, double-blind, placebo-controlled trial. Phase III rhIL-1ra Sepsis Syndrome Study Group. JAMA 1994;271:1836-1843.
    • (1994) JAMA , vol.271 , pp. 1836-1843
    • Fisher, C.J.1    Dhainaut, J.F.2    Opal, S.M.3    Pribble, J.P.4    Balk, R.A.5    Slotman, G.J.6    Iberti, T.J.7    Rackow, E.C.8    Shapiro, M.J.9    Greenman, R.L.10
  • 65
    • 0030877935 scopus 로고    scopus 로고
    • Confirmatory interleukin-1 receptor antagonist trial in severe sepsis: A phase III, randomized, double-blind, placebo-controlled, multicenter trial
    • The Interleukin-1 Receptor Antagonist Sepsis Investigator Group
    • Opal SM, Fisher CJ, Dhainaut JF, Vincent JL, Brase R, Lowry SF, Sadoff JC, Slotman GJ, Levy H, Balk RA, et al. Confirmatory interleukin-1 receptor antagonist trial in severe sepsis: a phase III, randomized, double-blind, placebo-controlled, multicenter trial. The Interleukin-1 Receptor Antagonist Sepsis Investigator Group. Crit Care Med 1997;25:1115-1124.
    • (1997) Crit Care Med , vol.25 , pp. 1115-1124
    • Opal, S.M.1    Fisher, C.J.2    Dhainaut, J.F.3    Vincent, J.L.4    Brase, R.5    Lowry, S.F.6    Sadoff, J.C.7    Slotman, G.J.8    Levy, H.9    Balk, R.A.10
  • 66
    • 26944461272 scopus 로고    scopus 로고
    • Evidence of a pharmacogenomic response to interleukin-l receptor antagonist in rheumatoid arthritis
    • Camp NJ, Cox A, di Giovine FS, McCabe D, Rich W, Duff GW. Evidence of a pharmacogenomic response to interleukin-l receptor antagonist in rheumatoid arthritis. Genes Immun 2005;6:467-471.
    • (2005) Genes Immun , vol.6 , pp. 467-471
    • Camp, N.J.1    Cox, A.2    Di Giovine, F.S.3    McCabe, D.4    Rich, W.5    Duff, G.W.6
  • 68
    • 84893588534 scopus 로고    scopus 로고
    • Dual inhibition of interleukin-1β and interleukin-18: A new treatment option for sepsis?
    • Opal SM. Dual inhibition of interleukin-1β and interleukin-18: a new treatment option for sepsis? Am J Respir Crit Care Med 2014;189:242-244.
    • (2014) Am J Respir Crit Care Med , vol.189 , pp. 242-244
    • Opal, S.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.