-
1
-
-
42349093581
-
Genomic fluidity and pathogenic bacteria: applications in diagnostics, epidemiology and intervention
-
Ahmed N., Dobrindt U., Hacker J., Hasnain S.E. Genomic fluidity and pathogenic bacteria: applications in diagnostics, epidemiology and intervention. Nat. Rev. Microbiol. 2008, 6:387-394.
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 387-394
-
-
Ahmed, N.1
Dobrindt, U.2
Hacker, J.3
Hasnain, S.E.4
-
2
-
-
33847223441
-
Use of logistic regression with dummy variables for modeling the growth-no growth limits of Saccharomyces cerevisiae IGAL01 as a function of sodium chloride, acid type, and potassium sorbate concentration according to growth media
-
Arroyo López F.N., Durán Quintana M.C., Garrido Fernández A. Use of logistic regression with dummy variables for modeling the growth-no growth limits of Saccharomyces cerevisiae IGAL01 as a function of sodium chloride, acid type, and potassium sorbate concentration according to growth media. J.Food Prot. 2007, 70:456-465.
-
(2007)
J.Food Prot.
, vol.70
, pp. 456-465
-
-
Arroyo López, F.N.1
Durán Quintana, M.C.2
Garrido Fernández, A.3
-
4
-
-
79953050382
-
Evaluation of growth/no growth interface of Listeria monocytogenes growing on stainless steel surfaces, detached from biofilms or in suspension, in response to pH and NaCl
-
Belessi C.-E.A., Gounadaki A.S., Schvartzman S., Jordan K., Skandamis P.N. Evaluation of growth/no growth interface of Listeria monocytogenes growing on stainless steel surfaces, detached from biofilms or in suspension, in response to pH and NaCl. Int. J. Food Microbiol. 2011, 145(Suppl):S53-S60.
-
(2011)
Int. J. Food Microbiol.
, vol.145
, Issue.SUPPL
, pp. S53-S60
-
-
Belessi, C.-E.A.1
Gounadaki, A.S.2
Schvartzman, S.3
Jordan, K.4
Skandamis, P.N.5
-
5
-
-
0028938217
-
Acid tolerance of enterohemorrhagic Escherichia coli
-
Benjamin M.M., Datta A.R. Acid tolerance of enterohemorrhagic Escherichia coli. Appl. Environ. Microbiol. 1995, 61:1669-1672.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1669-1672
-
-
Benjamin, M.M.1
Datta, A.R.2
-
6
-
-
60949108998
-
Generalized linear mixed models: a practical guide for ecology and evolution
-
Bolker B.M., Brooks M.E., Clark C.J., Geange S.W., Poulsen J.R., Stevens M.H.H., White J.-S.S. Generalized linear mixed models: a practical guide for ecology and evolution. Trends Ecol. Evol. 2009, 24:127-135.
-
(2009)
Trends Ecol. Evol.
, vol.24
, pp. 127-135
-
-
Bolker, B.M.1
Brooks, M.E.2
Clark, C.J.3
Geange, S.W.4
Poulsen, J.R.5
Stevens, M.H.H.6
White, J.-S.S.7
-
7
-
-
84889398472
-
-
John Wiley & Sons Ltd, Chichester, England
-
Crawley M.J. The R Book 2007, John Wiley & Sons Ltd, Chichester, England.
-
(2007)
The R Book
-
-
Crawley, M.J.1
-
8
-
-
0026092396
-
Escherichia coli O157:H7 and its significance in foods
-
Doyle M.P. Escherichia coli O157:H7 and its significance in foods. Int. J. Food Microbiol. 1991, 12:289-301.
-
(1991)
Int. J. Food Microbiol.
, vol.12
, pp. 289-301
-
-
Doyle, M.P.1
-
9
-
-
80053439474
-
Experimental methods and modeling techniques for description of cell population heterogeneity
-
Fernandes R.L., Nierychlo M., Lundin L., Pedersen A.E., Puentes Tellez P.E., Dutta A., Carlquist M., Bolic A., Schäpper D., Brunetti A.C., Helmark S., Heins A.-L., Jensen A.D., Nopens I., Rottwitt K., Szita N., van Elsas J.D., Nielsen P.H., Martinussen J., Sørensen S.J., Lantz A.E., Gernaey K.V. Experimental methods and modeling techniques for description of cell population heterogeneity. Biotechnol. Adv. 2011, 29:575-599.
-
(2011)
Biotechnol. Adv.
, vol.29
, pp. 575-599
-
-
Fernandes, R.L.1
Nierychlo, M.2
Lundin, L.3
Pedersen, A.E.4
Puentes Tellez, P.E.5
Dutta, A.6
Carlquist, M.7
Bolic, A.8
Schäpper, D.9
Brunetti, A.C.10
Helmark, S.11
Heins, A.-L.12
Jensen, A.D.13
Nopens, I.14
Rottwitt, K.15
Szita, N.16
van Elsas, J.D.17
Nielsen, P.H.18
Martinussen, J.19
Sørensen, S.J.20
Lantz, A.E.21
Gernaey, K.V.22
more..
-
10
-
-
9444285788
-
Escherichia coli acid resistance: tales of an amateur acidophile
-
Foster J.W. Escherichia coli acid resistance: tales of an amateur acidophile. Nat. Rev. Microbiol. 2004, 2:898-907.
-
(2004)
Nat. Rev. Microbiol.
, vol.2
, pp. 898-907
-
-
Foster, J.W.1
-
11
-
-
84977601395
-
-
John Wiley and Sons, NY, USA
-
Hosmer D.W., Lemeshow S., Sturdivant R.X. Applied Logistic Regression 2013, John Wiley and Sons, NY, USA. third ed.
-
(2013)
Applied Logistic Regression
-
-
Hosmer, D.W.1
Lemeshow, S.2
Sturdivant, R.X.3
-
12
-
-
19144366999
-
Heat resistance kinetics variation among various isolates of Escherichia coli
-
Juneja V.K., Marks H.M. Heat resistance kinetics variation among various isolates of Escherichia coli. Innov. Food Sci. Emerg. Technol. 2005, 6:155-161.
-
(2005)
Innov. Food Sci. Emerg. Technol.
, vol.6
, pp. 155-161
-
-
Juneja, V.K.1
Marks, H.M.2
-
14
-
-
63149179892
-
Gene transfer events and their occurrence in selected environments
-
Kelly B.G., Vespermann A., Bolton D.J. Gene transfer events and their occurrence in selected environments. Food Chem. Toxicol. 2009, 47:978-983.
-
(2009)
Food Chem. Toxicol.
, vol.47
, pp. 978-983
-
-
Kelly, B.G.1
Vespermann, A.2
Bolton, D.J.3
-
15
-
-
80051764780
-
Evaluation of Rhodotorula growth on solid substrate via a linear mixed effects model
-
Krulikosjá T., Jarosová E., Pataková P. Evaluation of Rhodotorula growth on solid substrate via a linear mixed effects model. Czech J. Food Sci. 2011, 29:400-410.
-
(2011)
Czech J. Food Sci.
, vol.29
, pp. 400-410
-
-
Krulikosjá, T.1
Jarosová, E.2
Pataková, P.3
-
16
-
-
0033983384
-
Target genes for virulence assessment of Escherichia coli isolates from water, food and the environment
-
Kuhnert P., Boerlin P., Frey J. Target genes for virulence assessment of Escherichia coli isolates from water, food and the environment. FEMS Microbiol. Rev. 2000, 24:107-117.
-
(2000)
FEMS Microbiol. Rev.
, vol.24
, pp. 107-117
-
-
Kuhnert, P.1
Boerlin, P.2
Frey, J.3
-
17
-
-
18444375008
-
Variation in acid resistance among shiga toxin-producing clones of pathogenic Escherichia coli
-
Large T.M., Walk S.T., Whittam T.S. Variation in acid resistance among shiga toxin-producing clones of pathogenic Escherichia coli. Appl. Environ. Microbiol. 2005, 71:2493-2500.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 2493-2500
-
-
Large, T.M.1
Walk, S.T.2
Whittam, T.S.3
-
18
-
-
84861123856
-
Variation in stress resistance patterns among stx genotypes and genetic lineages of shiga toxin-producing Escherichia coli O157
-
Lee K.-I., French N.P., Jones G., Hara-Kudo Y., Iyoda S., Kobayashi H., Sugita-Konishi Y., Tsubone H., Kumagai S. Variation in stress resistance patterns among stx genotypes and genetic lineages of shiga toxin-producing Escherichia coli O157. Appl. Environ. Microbiol. 2012, 78:3361-3368.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 3361-3368
-
-
Lee, K.-I.1
French, N.P.2
Jones, G.3
Hara-Kudo, Y.4
Iyoda, S.5
Kobayashi, H.6
Sugita-Konishi, Y.7
Tsubone, H.8
Kumagai, S.9
-
19
-
-
80051593042
-
Astochastic approach for integrating strain variability in modeling Salmonella enterica growth as a function of pH and water activity
-
Lianou A., Koutsoumanis K.P. Astochastic approach for integrating strain variability in modeling Salmonella enterica growth as a function of pH and water activity. Int. J. Food Microbiol. 2011, 149:254-261.
-
(2011)
Int. J. Food Microbiol.
, vol.149
, pp. 254-261
-
-
Lianou, A.1
Koutsoumanis, K.P.2
-
20
-
-
84886544230
-
Strain variability of the behavior of foodborne bacterial pathogens: a review
-
Lianou A., Koutsoumanis K.P. Strain variability of the behavior of foodborne bacterial pathogens: a review. Int. J. Food Microbiol. 2013, 167:310-321.
-
(2013)
Int. J. Food Microbiol.
, vol.167
, pp. 310-321
-
-
Lianou, A.1
Koutsoumanis, K.P.2
-
21
-
-
84871176912
-
Growth and survival parameter estimates and relation to RpoS levels in serotype O157:H7 and non-O157 Shiga toxin-producing Escherichia coli
-
Mand T.D., Döpfer D., Ingham B., Ané C., Kaspar C.W. Growth and survival parameter estimates and relation to RpoS levels in serotype O157:H7 and non-O157 Shiga toxin-producing Escherichia coli. J.Appl. Microbiol. 2013, 114:242-255.
-
(2013)
J.Appl. Microbiol.
, vol.114
, pp. 242-255
-
-
Mand, T.D.1
Döpfer, D.2
Ingham, B.3
Ané, C.4
Kaspar, C.W.5
-
22
-
-
0033776658
-
Growth/no growth interface of Brochothrix thermosphacta as a function of pH and water activity
-
Masana M.O., Baranyi J. Growth/no growth interface of Brochothrix thermosphacta as a function of pH and water activity. Food Microbiol. 2000, 17:485-493.
-
(2000)
Food Microbiol.
, vol.17
, pp. 485-493
-
-
Masana, M.O.1
Baranyi, J.2
-
23
-
-
0035542790
-
Aprobability of growth model for Escherichia coli O157:H7 as a function of temperature, pH, acetic acid, and salt
-
McKellar R.C., Lu X. Aprobability of growth model for Escherichia coli O157:H7 as a function of temperature, pH, acetic acid, and salt. J.Food Prot. 2001, 64:1922-1928.
-
(2001)
J.Food Prot.
, vol.64
, pp. 1922-1928
-
-
McKellar, R.C.1
Lu, X.2
-
24
-
-
0034630247
-
Quantifying the hurdle concept by modelling the bacterial growth/no growth interface
-
McMeekin T.A., Presser K.A., Ratkowsky D.A., Ross T., Salter M.A., Tienungoon S. Quantifying the hurdle concept by modelling the bacterial growth/no growth interface. Int. J. Food Microbiol. 2000, 55:93-98.
-
(2000)
Int. J. Food Microbiol.
, vol.55
, pp. 93-98
-
-
McMeekin, T.A.1
Presser, K.A.2
Ratkowsky, D.A.3
Ross, T.4
Salter, M.A.5
Tienungoon, S.6
-
25
-
-
0027482990
-
Verotoxin producing Escherichia coli O157 infections associated with the consumption of yoghurt
-
Morgan D., Newman C.P., Hutchinson D.N., Walker A.M., Rowe B., Majid F. Verotoxin producing Escherichia coli O157 infections associated with the consumption of yoghurt. Epidemiol. Infect. 1993, 111:181-187.
-
(1993)
Epidemiol. Infect.
, vol.111
, pp. 181-187
-
-
Morgan, D.1
Newman, C.P.2
Hutchinson, D.N.3
Walker, A.M.4
Rowe, B.5
Majid, F.6
-
26
-
-
0001655141
-
Variability in growth characteristics of different E.coli O157:H7 isolates, and its implications for predictive microbiology
-
Nauta M.J., Dufrenne J.B. Variability in growth characteristics of different E.coli O157:H7 isolates, and its implications for predictive microbiology. Quant. Microbiol. 1999, 1:137-155.
-
(1999)
Quant. Microbiol.
, vol.1
, pp. 137-155
-
-
Nauta, M.J.1
Dufrenne, J.B.2
-
27
-
-
62349128013
-
Escherichia coli O157:H7 strains isolated from environmental sources differ significantly in acetic acid resistance compared with human outbreak strains
-
Oh D.-H., Pan Y., Berry E., Cooley M., Mandrell R., Breidt F. Escherichia coli O157:H7 strains isolated from environmental sources differ significantly in acetic acid resistance compared with human outbreak strains. J.Food Prot. 2009, 72:503-509.
-
(2009)
J.Food Prot.
, vol.72
, pp. 503-509
-
-
Oh, D.-H.1
Pan, Y.2
Berry, E.3
Cooley, M.4
Mandrell, R.5
Breidt, F.6
-
28
-
-
0031834558
-
Modelling the growth limits (growth/no growth interface) of Escherichia coli as a function of temperature, pH, lactic acid concentration, and water activity
-
Presser K.A., Ross T., Ratkowsky D.A. Modelling the growth limits (growth/no growth interface) of Escherichia coli as a function of temperature, pH, lactic acid concentration, and water activity. Appl. Environ. Microbiol. 1998, 64:1773-1779.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1773-1779
-
-
Presser, K.A.1
Ross, T.2
Ratkowsky, D.A.3
-
29
-
-
4143061675
-
Acid resistance systems required for survival of Escherichia coli O157:H7 in the bovine gastrointestinal tract and in apple cider are different
-
Price S.B., Wright J.C., Degraves F.J., Foster J.W. Acid resistance systems required for survival of Escherichia coli O157:H7 in the bovine gastrointestinal tract and in apple cider are different. Appl. Environ. Microbiol. 2004, 70:4792-4799.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 4792-4799
-
-
Price, S.B.1
Wright, J.C.2
Degraves, F.J.3
Foster, J.W.4
-
30
-
-
84863304598
-
-
R Foundation for Statistical Computing, Vienna, Austria, URL
-
R Core Team R: a Language and Environment for Statistical Computing 2012, R Foundation for Statistical Computing, Vienna, Austria, URL. http://www.R-project.org/.
-
(2012)
R: a Language and Environment for Statistical Computing
-
-
-
31
-
-
18144406027
-
Secondary models
-
CRC Press LLC, NY, USA, R.C. McKellar, X. Lu (Eds.)
-
Ross T., Dalgaard P. Secondary models. Modeling Microbial Responses in Food 2004, 64-122. CRC Press LLC, NY, USA. R.C. McKellar, X. Lu (Eds.).
-
(2004)
Modeling Microbial Responses in Food
, pp. 64-122
-
-
Ross, T.1
Dalgaard, P.2
-
32
-
-
0034332821
-
Modelling the combined temperature and salt (NaCl) limits for growth of a pathogenic Escherichia coli strain using nonlinear logistic regression
-
Salter M.A., Ratkowsky D.A., Ross T., McMeekin T.A. Modelling the combined temperature and salt (NaCl) limits for growth of a pathogenic Escherichia coli strain using nonlinear logistic regression. Int. J. Food Microbiol. 2000, 61:159-167.
-
(2000)
Int. J. Food Microbiol.
, vol.61
, pp. 159-167
-
-
Salter, M.A.1
Ratkowsky, D.A.2
Ross, T.3
McMeekin, T.A.4
-
33
-
-
4043150746
-
Influence of animal origin and lineage on survival of Escherichia coli O157:H7 strains in strong and weak acid challenges
-
Saridakis C.E., Johnson R.P., Benson A., Ziebell K., Gyles C.L. Influence of animal origin and lineage on survival of Escherichia coli O157:H7 strains in strong and weak acid challenges. J.Food Prot. 2004, 67:1591-1596.
-
(2004)
J.Food Prot.
, vol.67
, pp. 1591-1596
-
-
Saridakis, C.E.1
Johnson, R.P.2
Benson, A.3
Ziebell, K.4
Gyles, C.L.5
-
34
-
-
84872963304
-
Nested by design: model fitting andinterpretation in a mixed model era
-
Schielzeth H., Nakagawa S. Nested by design: model fitting andinterpretation in a mixed model era. Methods Ecol. Evol. 2013, 4:14-24.
-
(2013)
Methods Ecol. Evol.
, vol.4
, pp. 14-24
-
-
Schielzeth, H.1
Nakagawa, S.2
-
35
-
-
2342568902
-
Partitioning of the variance in the growth parameters of Erwinia carotovora on vegetable products
-
Shorten P.R., Membré J.-M., Pleasants A.B., Kubaczka M., Soboleva T.K. Partitioning of the variance in the growth parameters of Erwinia carotovora on vegetable products. Int. J. Food Microbiol. 2004, 93:195-208.
-
(2004)
Int. J. Food Microbiol.
, vol.93
, pp. 195-208
-
-
Shorten, P.R.1
Membré, J.-M.2
Pleasants, A.B.3
Kubaczka, M.4
Soboleva, T.K.5
-
36
-
-
36248969335
-
Modeling the effect of inoculum size and acid adaptation on growth/no growth interface of Escherichia coli O157:H7
-
Skandamis P.N., Stopforth J.D., Kendall P., Belk K.E., Scanga J., Smith G.C., Sofos J.N. Modeling the effect of inoculum size and acid adaptation on growth/no growth interface of Escherichia coli O157:H7. Int. J. Food Microbiol. 2007, 120:237-249.
-
(2007)
Int. J. Food Microbiol.
, vol.120
, pp. 237-249
-
-
Skandamis, P.N.1
Stopforth, J.D.2
Kendall, P.3
Belk, K.E.4
Scanga, J.5
Smith, G.C.6
Sofos, J.N.7
-
37
-
-
84880344676
-
Extreme resistance to weak-acid preservatives in the spoilage yeast Zygosaccharomyces bailii
-
Stratford M., Steels H., Nebe-von-Caron G., Novodvorska M., Hayer K., Archer D.B. Extreme resistance to weak-acid preservatives in the spoilage yeast Zygosaccharomyces bailii. Int. J. Food Microbiol. 2013, 166:126-134.
-
(2013)
Int. J. Food Microbiol.
, vol.166
, pp. 126-134
-
-
Stratford, M.1
Steels, H.2
Nebe-von-Caron, G.3
Novodvorska, M.4
Hayer, K.5
Archer, D.B.6
-
38
-
-
0036178356
-
Phenotypic heterogeneity: differential stress resistance among individual cells of the yeast Saccharomyces cerevisiae
-
Sumner E.R., Avery S.V. Phenotypic heterogeneity: differential stress resistance among individual cells of the yeast Saccharomyces cerevisiae. Microbiology 2002, 148:345-351.
-
(2002)
Microbiology
, vol.148
, pp. 345-351
-
-
Sumner, E.R.1
Avery, S.V.2
-
39
-
-
77954090110
-
Studying the growth boundary and subsequent time to growth of pathogenic Escherichia coli serotypes by turbidity measurements
-
Valero A., Rodríguez M., Carrasco E., Pérez-Rodríguez F., García-Gimeno R.M., Zurera G. Studying the growth boundary and subsequent time to growth of pathogenic Escherichia coli serotypes by turbidity measurements. Food Microbiol. 2010, 27:819-828.
-
(2010)
Food Microbiol.
, vol.27
, pp. 819-828
-
-
Valero, A.1
Rodríguez, M.2
Carrasco, E.3
Pérez-Rodríguez, F.4
García-Gimeno, R.M.5
Zurera, G.6
-
40
-
-
34748820232
-
Performance of a growth-no growth model for Listeria monocytogenes developed for mayonnaise-based salads: influence of strain variability, food matrix, inoculation level, and presence of sorbic and benzoic acid
-
Vermeulen A., Smigic N., Rajkovic A., Gysemans K., Bernaerts K., Geeraerd A., Van Impe J., Debevere J., Devlieghere F. Performance of a growth-no growth model for Listeria monocytogenes developed for mayonnaise-based salads: influence of strain variability, food matrix, inoculation level, and presence of sorbic and benzoic acid. J.Food Prot. 2007, 9:2118-2126.
-
(2007)
J.Food Prot.
, vol.9
, pp. 2118-2126
-
-
Vermeulen, A.1
Smigic, N.2
Rajkovic, A.3
Gysemans, K.4
Bernaerts, K.5
Geeraerd, A.6
Van Impe, J.7
Debevere, J.8
Devlieghere, F.9
-
41
-
-
70349204333
-
Modelling the influence of the inoculation level on the growth/no growth interface of Listeria monocytogenes as a function of pH, aw and acetic acid
-
Vermeulen A., Gysemans K.P.M., Bernaerts K., Geeraerd A.H., Debevere J., Devlieghere F., Van Impe J.F. Modelling the influence of the inoculation level on the growth/no growth interface of Listeria monocytogenes as a function of pH, aw and acetic acid. Int. J. Food Microbiol. 2009, 135:83-89.
-
(2009)
Int. J. Food Microbiol.
, vol.135
, pp. 83-89
-
-
Vermeulen, A.1
Gysemans, K.P.M.2
Bernaerts, K.3
Geeraerd, A.H.4
Debevere, J.5
Devlieghere, F.6
Van Impe, J.F.7
-
42
-
-
0028121387
-
Survival of Escherichia coli 0157:H7 in mayonnaise and mayonnaise-based sauces at room and refrigerated temperatures
-
Weagant S.D., Bryant J.L., Bark D.H. Survival of Escherichia coli 0157:H7 in mayonnaise and mayonnaise-based sauces at room and refrigerated temperatures. J.Food Prot. 1994, 57:629-631.
-
(1994)
J.Food Prot.
, vol.57
, pp. 629-631
-
-
Weagant, S.D.1
Bryant, J.L.2
Bark, D.H.3
-
43
-
-
0037023851
-
Variation among Escherichia coli O157:H7 strains relative to their growth, survival, thermal inactivation, and toxin production in broth
-
Whiting R.C., Golden M.H. Variation among Escherichia coli O157:H7 strains relative to their growth, survival, thermal inactivation, and toxin production in broth. Int. J. Food Microbiol. 2002, 75:127-133.
-
(2002)
Int. J. Food Microbiol.
, vol.75
, pp. 127-133
-
-
Whiting, R.C.1
Golden, M.H.2
-
44
-
-
0027304899
-
Fate of enterohemorrhagic Escherichia coli 0157:H7 in apple cider with and without preservatives
-
Zhao T., Doyle M.P., Besser R.E. Fate of enterohemorrhagic Escherichia coli 0157:H7 in apple cider with and without preservatives. Appl. Environ. Microbiol. 1993, 59:2526-2530.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2526-2530
-
-
Zhao, T.1
Doyle, M.P.2
Besser, R.E.3
|