Variation in stress resistance patterns among stx genotypes and genetic lineages of shiga toxin-producing Escherichia coli O157

Applied and Environmental Microbiology

Volumn 78, Issue 9, 2012, Pages 3361-3368

  Lee, Ken Ichi ^a   French, Nigel P ^b   Jones, Geoff ^b   Hara Kudo, Yukiko ^a,c   Iyoda, Sunao ^d   Kobayashi, Hideki ^e   Sugita Konishi, Yoshiko ^a,c   Tsubone, Hirokazu ^a   Kumagai, Susumu ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b MASSEY UNIVERSITY   (New Zealand)

^c NATIONAL INSTITUTE OF HEALTH SCIENCES   (Japan)

^d NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

^e NATIONAL INSTITUTE OF ANIMAL HEALTH   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI O157; FREEZE-THAW; GENERAL TRENDS; MULTI VARIATE ANALYSIS; MULTIPLE STRESS; POLYMORPHISM ASSAYS; STRESS RESISTANCE; UNIVARIATE; UNIVARIATE ANALYSIS;

CLUSTER ANALYSIS; ESCHERICHIA COLI; HEAT RESISTANCE; PRINCIPAL COMPONENT ANALYSIS;

ELASTICITY;

ACID; OXIDIZING AGENT; SHIGA TOXIN;

CLUSTER ANALYSIS; COLIFORM BACTERIUM; FREEZE-THAW CYCLE; GENOTYPE; MULTIVARIATE ANALYSIS; OSMOSIS; PRINCIPAL COMPONENT ANALYSIS; TOXIN;

ANIMAL DISEASE; ARTICLE; CLASSIFICATION; COLD; DRUG EFFECT; ESCHERICHIA COLI INFECTION; ESCHERICHIA COLI O157; GENETIC POLYMORPHISM; GENETICS; GENOTYPE; HEAT; HUMAN; MICROBIAL VIABILITY; MICROBIOLOGY; MOLECULAR TYPING; OSMOTIC PRESSURE; OXIDATIVE STRESS; PHYSIOLOGICAL STRESS; PHYSIOLOGY; RADIATION EXPOSURE;

ACIDS; COLD TEMPERATURE; ESCHERICHIA COLI INFECTIONS; ESCHERICHIA COLI O157; GENOTYPE; HOT TEMPERATURE; HUMANS; MICROBIAL VIABILITY; MOLECULAR TYPING; OSMOTIC PRESSURE; OXIDANTS; OXIDATIVE STRESS; POLYMORPHISM, GENETIC; SHIGA TOXIN; STRESS, PHYSIOLOGICAL;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 84861123856     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.06646-11     Document Type: Article

References (46)

1. Abu-Ali GS, et al. 2010. Increased adherence and expression of virulence genes in a lineage of Escherichia coli O157:H7 commonly associated with human infections. PLoS One 5:e10167.
2. Benito A, Ventoura G, Casadei M, Robinson T, Mackey B. 1999. Variation in resistance of natural isolates of Escherichia coli O157 to high hydrostatic pressure, mild heat, and other stresses. Appl. Environ. Microbiol. 65:1564-1569.
3. Bergholz TM, den Bakker HC, Fortes ED, Boor KJ, Wiedmann M. 2010. Salt stress phenotypes in Listeria monocytogenes vary by genetic lineage and temperature. Foodborne Pathog. Dis. 7:1537-1549.
4. Besser TE, et al. 2007. Greater diversity of Shiga toxin-encoding bacteriophage insertion sites among Escherichia coli O157:H7 isolates from cattle than in those from humans. Appl. Environ. Microbiol. 73:671-679.
5. Chung HJ, Bang W, Drake MA. 2006. Stress response of Escherichia coli. Compr. Rev. Food. Sci. Food Saf. 5:52-64.
6. Collet D. 2003. Modelling survival data in medical research. CRC Press, Boca Raton, FL.
7. Dowd SE, Ishizaki H. 2006. Microarray based comparison of two Escherichia coli O157:H7 lineages. BMC Microbiol. 6:30.
8. Guisbert E, Yura T, Rhodius VA, Gross CA. 2008. Convergence of molecular, modeling, and systems approaches for an understanding of the Escherichia coli heat shock response. Microbiol. Mol. Biol. Rev. 72:545-554.
9. Gyles CL. 2007. Shiga toxin-producing Escherichia coli: an overview. J. Anim. Sci. 85:E45-E62.
10. Han MJ, Lee SY. 2006. The Escherichia coli proteome: Past, present, and future prospects. Microbiol. Mol. Biol. Rev. 70:362-439.
11. Hara-Kudo Y, Miyahara M, Kumagai S. 2000. Loss of O157 O antigenicity of verotoxin-producing Escherichia coli O157:H7 surviving under starvation conditions. Appl. Environ. Microbiol. 66:5540-5543.
12. Hartzell A, et al. 2011. Escherichia coli O157:H7 of genotype lineagespecific polymorphism assay 211111 and clade 8 are common clinical isolates within Pennsylvania. Foodborne Pathog. Dis. 8:763-768.
13. Jacobs J, Rhodes M, Sturgis B, Wood B. 2009. Influence of environmental gradients on the abundance and distribution of Mycobacterium spp. in a coastal lagoon estuary. Appl. Environ. Microbiol. 75:7378-7384.
14. Jay JM, Loessner MJ, Golden DA. 2005. Modern food microbiology, 7th ed. Springer, New York, NY.
15. Kaufman L, Rousseeuw PJ. 1990. Finding groups in data: an introduction to cluster analysis. Wiley, New York, NY.
16. Keymer DP, Miller MC, Schoolnik GK, Boehm AB. 2007. Genomic and phenotypic diversity of coastal Vibrio cholerae strains is linked to environmental factors. Appl. Environ. Microbiol. 73:3705-3714.
17. Kim J, Nietfeldt J, Benson AK. 1999. Octamer-based genome scanning distinguishes a unique subpopulation of Escherichia coli O157:H7 strains in cattle. Proc. Natl. Acad. Sci. U. S. A. 96:13288-13293.
18. Laing CR, et al. 2009. In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hypervirulence. BMC Genomics 10:287.
19. Lee K, et al. 2011. Multivariate analyses revealed distinctive features differentiating human and cattle isolates of Shiga toxin-producing Escherichia coli O157 in Japan. J. Clin. Microbiol. 49:1495-1500.
20. Leenanon B, Drake MA. 2001. Acid stress, starvation, and cold stress affect poststress behavior of Escherichia coli O157:H7 and nonpathogenic Escherichia coli. J. Food Prot. 64:970-974.
21. Leopold SR, et al. 2009. A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis. Proc. Natl. Acad. Sci. U. S. A. 106:8713-8718.
22. Malone AS, Yousef AE, LeJeune JT. 2007. Association of prophage antiterminator Q alleles and susceptibility to food-processing treatments applied to Escherichia coli O157 in laboratory media. J. Food Prot. 70: 2617-2619.
23. Manning SD, et al. 2008. Variation in virulence among clades of Escherichia coli O157:H7 associated with disease outbreaks. Proc. Natl. Acad. Sci. U. S. A. 105:4868-4873.
24. McClure PJ, Hall S. 2000. Survival of Escherichia coli in foods. Symp. Ser. Soc. Appl. Microbiol. 2000:61S-70S.
25. McKellar RC, Knight KP. 1999. Growth and survival of various strains of enterohemorrhagic Escherichia coli in hydrochloric and acetic acid. J. Food Prot. 62:1466-1469.
26. Meng J, Doyle MP, Zhao T, Zhao S. 2007. Enterohemorrhagic Escherichia coli, p 249-269. In Doyle MP, Beuchat LR (ed), Food microbiology: fundamentals and frontiers, 3rd ed. ASM Press, Washington DC.
27. Oda Y, Ouchi K. 1989. Principal component analysis of the characteristics desirable in bakers yeasts. Appl. Environ. Microbiol. 55:1495-1499.
28. Oh DH, et al. 2009. Escherichia coli O157:H7 strains isolated from environmental sources differ significantly in acetic acid resistance compared with human outbreak strains. J. Food Prot. 72:503-509.
29. Parente E, et al. 2010. Diversity of stress tolerance in Lactobacillus plantarum, Lactobacillus pentosus and Lactobacillus paraplantarum: a multivariate screening study. Int. J. Food Microbiol. 144:270-279.
30. Peleg M, Cole MB. 1998. Reinterpretation of microbial survival curves. Crit. Rev. Food Sci. Nutr. 38:353-380.
31. Petrie A, Watson P. 2006. Statistics for veterinary and animal science, 2nd ed. Blackwell Publishing Ltd., Oxford, United Kingdom.
32. R Development Core Team. 2010. R: a language and environment for statistical computing. R Foundation for Statistical Computing. http://www.R-project.org.
33. Rowe MT, Kirk RB. 2000. Effect of nutrient starvation on the resistance of Escherichia coli O157:H7 to subsequent heat stress. J. Food Prot. 63:1745-1748.
34. Saridakis CE, Johnson RP, Benson A, Ziebell K, Gyles CL. 2004. Influence of animal origin and lineage on survival of Escherichia coli O157:H7 strains in strong and weak acid challenges. J. Food Prot. 67: 1591-1596.
35. Siezen RJ, et al. 2010. Phenotypic and genomic diversity of Lactobacillus plantarum strains isolated from various environmental niches. Environ. Microbiol. 12:758-773.
36. Stevens MP, van Diemen PM, Dziva F, Jones PW, Wallis TS. 2002. Options for the control of enterohaemorrhagic Escherichia coli in ruminants. Microbiology 148:3767-3778.
37. Stortz G, Hengge-Aronis R. 2000. Bacterial stress responses. ASM Press, Washington, DC.
38. Su CY, Brandt LJ. 1995. Escherichia coli O157:H7 infection in humans. Ann. Intern. Med. 123:698-714.
39. Vanaja SK, Springman AC, Besser TE, Whittam TS, Manning SD. 2010. Differential expression of virulence and stress fitness genes between Esch-erichia coli O157:H7 strains with clinical or bovine-biased genotypes. Appl. Environ. Microbiol. 76:60-68.
40. Venables WN, Ripley BD. 2002. Modern applied statistics with S, 4th ed. Springer-Verlag, Berlin, Germany.
41. Vogel HJ, Bonner DM. 1956. Acetylornithinase of Escherichia coli: partial purification and some properties. J. Biol. Chem. 218:97-106.
42. Yang Z, et al. 2004. Identification of common subpopulations of nonsorbitol-fermenting, β-glucuronidase-negative Escherichia coli O157:H7 from bovine production environments and human clinical samples. Appl. Environ. Microbiol. 70:6846-6854.
43. Yokoyama E, et al. 2011. Biased distribution of IS629 among strains in different lineages of enterohemorrhagic Escherichia coli serovar O157. Infect. Genet. Evol. 11:78-82.
44. Zhang YX, et al. 2010. Lineage and host source are both correlated with levels of Shiga toxin 2 production by Escherichia coli O157:H7 strains. Appl. Environ. Microbiol. 76:474-482.
45. Ziebell K, et al. 2008. Genotypic characterization and prevalence of virulence factors among Canadian Escherichia coli O157:H7 strains. Appl. Environ. Microbiol. 74:4314-4323.
46. Zotta T, Ricciardi A, Ciocia F, Rossano R, Parente E. 2008. Diversity of stress responses in dairy thermophilic streptococci. Int. J. Food Microbiol. 124:34-42.