Inhibition of spring viraemia of carp virus replication in an Epithelioma papulosum cyprini cell line by RNAi

Journal of Fish Diseases

Volumn 38, Issue 2, 2015, Pages 197-207

  Gotesman, M ^a   Soliman, H ^a,b   Besch, R ^c   El Matbouli, M ^a  

^a UNIVERSITY OF VETERINARY MEDICINE   (Austria)

^b Assiut University   (Egypt)

^c LUDWIG MAXIMILIANS UNIVERSITY   (Germany)

Author keywords

Nucleoprotein; Phosphoprotein; Real time quantitative reverse transcription PCR; Rhabdoviridae; SiRNA

Indexed keywords

CYPRINIDAE; RABIES VIRUS; RHABDOVIRIDAE;

ANIMAL; CELL LINE; FISH; FISH DISEASES; GENETICS; PHYSIOLOGY; RHABDOVIRIDAE; RHABDOVIRIDAE INFECTIONS; RNA INTERFERENCE; VETERINARY; VIREMIA; VIROLOGY; VIRUS REPLICATION;

ANIMALS; CELL LINE; FISH DISEASES; FISHES; RHABDOVIRIDAE; RHABDOVIRIDAE INFECTIONS; RNA INTERFERENCE; VIREMIA; VIRUS REPLICATION;

EID: 84921032176     PISSN: 01407775     EISSN: 13652761     Source Type: Journal    
DOI: 10.1111/jfd.12227     Document Type: Article

References (54)

1. Adamek M., Rakus K.L., Chyb J., Brogden G., Huebner A., Irnazarow I. & Steinhagen D. (2012) Interferon type I responses to virus infections in carp cells: in vitro studies on Cyprinid herpesvirus 3 and Rhabdovirus carpio infections. Fish & Shellfish Immunology 33, 482-493.
2. Ahne W. (1978) Uptake and multiplication of spring viraemia of carp virus in carp, Cyprinus carpio L. Journal of Fish Diseases 1, 265-268.
3. Ahne W. (1986) The influence of environmental temperature and infection route on the immune response of carp (Cyprinus carpio) to spring viremia of carp virus (SVCV). Veterinary Immunology & Immunopathology 12, 383-386.
4. Ahne W., Bjorklund H.V., Essbauer S., Fijan N., Kurath G. & Winton J.R. (2002) Spring viremia of carp (SVC). Diseases of Aquatic Organisms 52, 261-272.
5. Bohle H., Lorenzen N. & Schyth B.D. (2011) Species specific inhibition of viral replication using dicer substrate siRNAs (DsiRNAs) targeting the viral nucleoprotein of the fish pathogenic rhabdovirus viral hemorrhagic septicemia virus (VHSV). Antiviral Research 90, 187-194.
6. Bustin S.A. & Nolan T. (2004) Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction. Journal of Biomolecular Techniques 15, 155-166.
7. Caplen N.J., Parrish S., Imani F., Fire A. & Morgan R.A. (2001) Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems. Proceedings of the National Academy of Sciences of the USA 98, 9742-9747.
8. Chen Z.Y., Liu H., Li Z.Q. & Zhang Q.Y. (2008) Development and characterization of monoclonal antibodies to spring viraemia of carp virus. Veterinary Immunology & Immunopathology 123, 266-276.
9. Coloma R., Valpuesta J.M., Arranz R., Carrascosa J.L., Ortín J. & Martín-Benito J. (2009) The structure of a biologically active influenza virus ribonucleoprotein complex. PLoS Pathology 5, e1000491.
10. Dikkeboom A.L., Radi C., Toohey-Kurth K., Marcquenski S., Engel M., Goodwin A.E., Way K., Stone D.M. & Longshaw C. (2004) First report of spring viremia of carp virus (SVCV) in wild common carp in North America. Journal of Aquatic Animal Health 16, 169-178.
11. Dixon P.F., Hattenberger-Baudouy A.M. & Way K. (1994) Detection of carp antibodies to spring viraemia of carp virus by a competitive immunoassay. Diseases of Aquatic Organisms 19, 181-186.
12. Elbashir S.M., Harborth J., Lendeckel W., Yalcin A., Weber K. & Tuschl T. (2001a) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411, 494-498.
13. Elbashir S.M., Lendeckel W. & Tuschl T. (2001b) RNA interference is mediated by 21- and 22-nucleotide RNAs. Genes & Development 15, 188-200.
14. Emmenegger E.J. & Kurath G. (2008) DNA vaccine protects ornamental koi (Cyprinus carpio koi) against North American spring viremia of carp virus. Vaccine 26, 6415-6421.
15. Fijan N., Petrinec Z., Sulimanovic D. & Zwillenberg L.O. (1971) Isolation of the viral causative agent from the acute form of infectious dropsy of carp. Veterinarski Arhiv 41, 125-138.
16. Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E. & Mello C.C. (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391, 806-811.
17. Gavrilov K. & Saltzman M. (2012) Therapeutic siRNA: principles, challenges, and strategies. The Yale Journal of Biology and Medicine 85, 187-200.
18. Gupta P.K., Sonwane A.A., Singh N.K., Meshram C.D., Dahiya S.S., Pawar S.S., Gupta S.P., Chaturvedi V.K. & Saini M. (2012) Intracerebral delivery of small interfering RNAs (siRNAs) using adenoviral vector protects mice against lethal peripheral rabies challenge. Virus Research 163, 11-18.
19. Hoffmann B., Schütze H. & Mettenleiter T.C. (2002) Determination of the complete genomic sequence and analysis of the gene products of the virus of Spring Viremia of Carp, a fish rhabdovirus. Virus Research 84, 89-100.
20. Hwang S.D., Midorikawa N., Punnarak P., Kikuchi Y., Kondo H., Hirono I. & Aoki T. (2012) Inhibition of hirame rhabdovirus growth by RNA aptamers. Journal of Fish Diseases 35, 927-934.
21. Johnson M.C., Maxwell J.M., Loh P.C. & Leong J.A. (1999) Molecular characterization of the glycoproteins from two warm water rhabdoviruses: snakehead rhabdovirus (SHRV) and rhabdovirus of penaeid shrimp (RPS): spring viremia of carp virus (SVCV). Virus Research 64, 95-106.
22. Kanellos T., Sylvester I.D., D'Mello F., Howard C.R., Mackie A., Dixon P.F., Chang K.C., Ramstad A., Midtlyng P.J. & Russell P.H. (2006) DNA vaccination can protect Cyprinus Carpio against spring viraemia of carp virus. Vaccine 24, 4927-4933.
23. Kim M.S. & Kim K.H. (2011) Inhibition of viral hemorrhagic septicemia virus replication using a short hairpin RNA targeting the G gene. Archives of Virology 156, 457-464.
24. Kim K., Lee Y.S., Harris D., Nakahara K. & Carthew R.W. (2006) The RNAi pathway initiated by Dicer-2 in Drosophila. Cold Spring Harbor Symposia on Quantitative Biology 71, 39-44.
25. Kim M.S., Jee B.Y., Cho M.Y., Kim J.W., Jeong H.D. & Kim K.H. (2012) Fugu double U6 promoter-driven long double-stranded RNA inhibits proliferation of viral hemorrhagic septicemia virus (VHSV) in fish cell lines. Archives of Virology 157, 1029-1038.
26. Koutná M., Veselý T., Psikal I. & Hůlová J. (2003) Identification of spring viraemia of carp virus (SVCV) by combined RT-PCR and nested PCR. Diseases of Aquatic Organisms 55, 229-235.
27. Lee Y.S., Nakahara K., Pham J.W., Kim K., He Z., Sontheimer E.J. & Carthew R.W. (2004) Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways. Cell 117, 69-81.
28. Lima P.C., Harris J.O. & Cook M. (2013) Exploring RNAi as a therapeutic strategy for controlling disease in aquaculture. Fish & Shellfish Immunology 34, 729-743.
29. Liu L., Li Q., Lin L., Wang M., Lu Y., Wang W., Yuan J., Li L. & Liu X. (2013) Proteomic analysis of epithelioma papulosum cyprini cells infected with spring viremia of carp virus. Fish & Shellfish Immunology 35, 26-35.
30. Mallory A. & Vaucheret H. (2010) Form, function, and regulation of ARGONAUTE proteins. The Plant Cell Online 22, 3879-3889.
31. Mochizuki K. (2010) DNA rearrangements directed by non-coding RNAs in ciliates. Wiley Interdisciplinary Reviews. RNA 1, 376-387.
32. Oreshkova S.F., Shchelkunov I.S., Tikunova N.V., Shchelkunova T.I., Puzyrev A.T. & Ilyichev A.A. (1999) Detection of spring viremia of carp virus isolates by hybridization with non-radioactive probes and amplification by polymerase chain reaction. Virus Research 63, 3-10.
33. Phelps N.B., Armién A.G., Mor S.K., Goyal S.M., Warg J.V., Bhagyam R. & Monahan T. (2012) Spring viremia of carp virus in Minnehaha Creek, Minnesota. Journal of Aquatic Animal Health 24, 232-237.
34. Ponchel F., Toomes C., Bransfield K., Leong F.T., Douglas S.H., Field S.L., Bell S.M., Combaret V., Puisieux A., Mighell A.J., Robinson P.A., Inglehearn C.F., Isaacs J.D. & Markham A.F. (2003) Real-time PCR based on SYBR-Green I fluorescence: an alternative to the TaqMan assay for a relative quantification of gene rearrangements, gene amplifications and micro gene deletions. BMC Biotechnology 3, 18.
35. Porntrakulpipat S., Supankong S., Chatchawanchonteera A. & Pakdee P. (2010) RNA interference targeting nucleocapsid protein (C) inhibits classical swine fever virus replication in SK-6 cells. Veterinary Microbiology 142, 41-44.
36. Portela A. & Digard P. (2002) The influenza virus nucleoprotein: a multifunctional RNA-binding protein pivotal to virus replication. Journal of General Virology 83, 723-734.
37. Rahmeh A.A., Morin B., Schenk A.D., Liang B., Heinrich B.S., Brusic V., Walz T. & Whelan S.P. (2012) Critical phosphoprotein elements that regulate polymerase architecture and function in vesicular stomatitis virus. Proceedings of the National Academy of Sciences of the USA 109, 14628-14633.
38. Reed L.J. & Muench H. (1938) A simple method of estimating fifty percent endpoints. American Journal of Hygiene 27, 493-497.
39. Rodák L., Pospíšil Z., Tomanek J., Veselý T., Obr T. & Valíček L. (1993) Enzyme-linked immunosorbent assay (ELISA) for the detection of spring viraemia of carp virus (SVCV) in tissue homogenates of the carp, Cyprinus carpio L. Journal of Fish Diseases 16, 101-111.
40. Roy P. (1981) Phosphoproteins of spring viremia of carp virus. Virology 112, 274-281.
41. Ruiz S., Schyth B.D., Encinas P., Tafalla C., Estepa A., Lorenzen N. & Coll J.M. (2009) New tools to study RNA interference to fish viruses: fish cell lines permanently expressing siRNAs targeting the viral polymerase of viral hemorrhagic septicemia virus. Antiviral Research 82, 148-156.
42. Saleh M., Soliman H., Schachner O. & El-Matbouli M. (2012) Direct detection of unamplified spring viraemia of carp virus RNA using unmodified gold nanoparticles. Diseases of Aquatic Organisms 100, 3-10.
43. Sarathi M., Simon M.C., Venkatesan C., Thomas J., Ravi M., Madan N., Thiyagarajan S. & Sahul Hameed A.S. (2010) Efficacy of bacterially expressed dsRNA specific to different structural genes of white spot syndrome virus (WSSV) in protection of shrimp from WSSV infection. Journal of Fish Diseases 33, 603-607.
44. Schyth B.D. (2008) RNAi-mediated gene silencing in fishes? Journal of Fish Biology 72, 1890-1906.
45. Schyth B.D., Lorenzen N. & Pedersen F.S. (2007) A high throughput in vivo model for testing delivery and antiviral effects of siRNAs in vertebrates. Molecular Therapy 15, 1366-1372.
46. Schyth B.D., Bramsen J.B., Pakula M.M., Larashati S., Kjems J., Wengel J. & Lorenzen N. (2012) In vivo screening of modified siRNAs for non-specific antiviral effect in a small fish model: number and localization in the strands are important. Nucleic Acids Research 40, 4653-4665.
47. Sifuentes-Romero I., Milton S.L. & García-Gasca A. (2011) Post-transcriptional gene silencing by RNA interference in non-mammalian vertebrate systems: where do we stand? Mutation Research 728, 158-171.
48. Sokol F. & Koprowski H. (1975) Structure-function relationships and mode of replication of animal rhabdoviruses. Proceedings of the National Academy of Sciences of the USA 72, 933-936.
49. Stefani G. & Slack F.J. (2008) Small non-coding RNAs in animal development. Nature Reviews Molecular Cell Biology 9, 219-230.
50. Talbi C., Cabon J., Baud M., Bourjaily M., de Boisséson C., Castric J. & Bigarré L. (2011) Genetic diversity of perch rhabdoviruses isolates based on the nucleoprotein and glycoprotein genes. Archives of Virology 156, 2133-2144.
51. Teng Y., Liu H., Lv J.Q., Fan W.H., Zhang Q.Y. & Qin Q.W. (2007) Characterization of complete genome sequence of the spring viremia of carp virus isolated from common carp (Cyprinus carpio) in China. Archives of Virology 152, 1457-1465.
52. Winton J., Batts W., deKinkelin P., LeBerre M., Bremont M. & Fijan N. (2010) Current lineages of the epithelioma papulosum cyprini (EPC) cell line are contaminated with fathead minnow, Pimephales promelas, cells. Journal of Fish Diseases 33, 701-704.
53. Yang Y.J., Zhao P.S., Zhang T., Wang H.L., Liang H.R., Zhao L.L., Wu H.X., Wang T.C., Yang S.T. & Xia X.Z. (2012) Small interfering RNAs targeting the rabies virus nucleoprotein gene. Virus Research 169, 169-174.
54. Yue Z., Teng Y., Liang C., Xie X., Xu B., Zhu L., Lei Z., He J., Liu Z., Jiang Y., Liu H. & Qin Q. (2008) Development of a sensitive and quantitative assay for spring viremia of carp virus based on real-time RT-PCR. Journal of Virological Methods 152, 43-48.