-
1
-
-
84975795680
-
An integrated map of genetic variation from 1, 092 human genomes
-
The 1000 Genomes Project Consortium. 2012. An integrated map of genetic variation from 1, 092 human genomes. Nature 491: 56-65.
-
(2012)
Nature
, vol.491
, pp. 56-65
-
-
-
2
-
-
5444272310
-
Polyalanine expansions in human
-
Amiel J, Trochet D, Clement-Ziza M, Munnich A, Lyonnet S. 2004. Polyalanine expansions in human. Hum Mol Genet (suppl 2) 13: R235-R243.
-
(2004)
Hum Mol Genet
, vol.13
, pp. R235-R243
-
-
Amiel, J.1
Trochet, D.2
Clement-Ziza, M.3
Munnich, A.4
Lyonnet, S.5
-
3
-
-
84876512111
-
Distinct mutational behaviors differentiate short tandem repeats from microsatellites in the human genome
-
Ananda G, Walsh E, Jacob KD, Krasilnikova M, Eckert KA, Chiaromonte F, Makova KD. 2013. Distinct mutational behaviors differentiate short tandem repeats from microsatellites in the human genome. Genome Biol Evol 5: 606-620.
-
(2013)
Genome Biol Evol
, vol.5
, pp. 606-620
-
-
Ananda, G.1
Walsh, E.2
Jacob, K.D.3
Krasilnikova, M.4
Eckert, K.A.5
Chiaromonte, F.6
Makova, K.D.7
-
4
-
-
0033857247
-
Microsatellite variability differs between dinucleotide repeat motifs-evidence from Drosophila melanogaster
-
Bachtrog D, Agis M, Imhof M, Schlotterer C. 2000. Microsatellite variability differs between dinucleotide repeat motifs-evidence from Drosophila melanogaster. Mol Biol Evol 17: 1277-1285.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1277-1285
-
-
Bachtrog, D.1
Agis, M.2
Imhof, M.3
Schlotterer, C.4
-
5
-
-
77956393408
-
Mutability of Y-chromosomal microsatellites: Rates, characteristics, molecular bases, and forensic implications
-
Ballantyne KN, Goedbloed M, Fang R, Schaap O, Lao O, Wollstein A, Choi Y, van Duijn K, Vermeulen M, Brauer S, et al. 2010. Mutability of Y-chromosomal microsatellites: rates, characteristics, molecular bases, and forensic implications. Am J Hum Genet87: 341-353.
-
(2010)
Am J Hum Genet
, vol.87
, pp. 341-353
-
-
Ballantyne, K.N.1
Goedbloed, M.2
Fang, R.3
Schaap, O.4
Lao, O.5
Wollstein, A.6
Choi, Y.7
Van Duijn, K.8
Vermeulen, M.9
Brauer, S.10
-
6
-
-
0033555906
-
Tandem repeats finder: A program to analyze DNA sequences
-
Benson G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res 27: 573.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 573
-
-
Benson, G.1
-
7
-
-
17344371397
-
Short GCG expansions in the PABP2 gene cause oculopharyngeal muscular dystrophy
-
Brais B, Bouchard JP, Xie YG, Rochefort DL, Chretien N, Tome FM, Lafrentere RG, Rommens JM, Uyama E, Nohira O.1998. Short GCG expansions in the PABP2 gene cause oculopharyngeal muscular dystrophy. Nat Genet 18: 164-167.
-
(1998)
Nat Genet
, vol.18
, pp. 164-167
-
-
Brais, B.1
Bouchard, J.P.2
Xie, Y.G.3
Rochefort, D.L.4
Chretien, N.5
Tome, F.M.6
Lafrentere, R.G.7
Rommens, J.M.8
Uyama, E.9
Nohira, O.10
-
8
-
-
0032231877
-
Comprehensive human genetic maps: Individual and sex-specific variation in recombination
-
Broman KW, Murray JC, Sheffield VC, White RL, Weber JL. 1998. Comprehensive human genetic maps: individual and sex-specific variation in recombination. Am J Hum Genet 63: 861-869.
-
(1998)
Am J Hum Genet
, vol.63
, pp. 861-869
-
-
Broman, K.W.1
Murray, J.C.2
Sheffield, V.C.3
White, R.L.4
Weber, J.L.5
-
9
-
-
0032741103
-
Population data on the thirteen CODIS core short tandem repeat loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians
-
Budowle B, Moretti TR, Baumstark AL, Defenbaugh DA, Keys KM. 1999. Population data on the thirteen CODIS core short tandem repeat loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians. J Forensic Sci 44: 1277-1286.
-
(1999)
J Forensic Sci
, vol.44
, pp. 1277-1286
-
-
Budowle, B.1
Moretti, T.R.2
Baumstark, A.L.3
Defenbaugh, D.A.4
Keys, K.M.5
-
10
-
-
33749991391
-
The rise, fall and renaissance of microsatellites in eukaryotic genomes
-
Buschiazzo E, Gemmell NJ. 2006. The rise, fall and renaissance of microsatellites in eukaryotic genomes. Bio Essays 28: 1040-1050.
-
(2006)
Bio Essays
, vol.28
, pp. 1040-1050
-
-
Buschiazzo, E.1
Gemmell, N.J.2
-
11
-
-
0031024531
-
Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci
-
Chakraborty R, Kimmel M, Stivers DN, Davison LJ, Deka R. 1997. Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci. Proc Natl Acad Sci 94: 1041-1046.
-
(1997)
Proc Natl Acad Sci
, vol.94
, pp. 1041-1046
-
-
Chakraborty, R.1
Kimmel, M.2
Stivers, D.N.3
Davison, L.J.4
Deka, R.5
-
12
-
-
0036510121
-
A polymorphic microsatellite that mediates induction of PIG3 by p53
-
Contente A, Dittmer A, Koch MC, Roth J, Dobbelstein M. 2002. A polymorphic microsatellite that mediates induction of PIG3 by p53. Nat Genet 30: 315-320.
-
(2002)
Nat Genet
, vol.30
, pp. 315-320
-
-
Contente, A.1
Dittmer, A.2
Koch, M.C.3
Roth, J.4
Dobbelstein, M.5
-
13
-
-
84901298048
-
Large-scale analysis of tandem repeat variability in the human genome
-
Duitama J, Zablotskaya A, Gemayel R, Jansen A, Belet S, Vermeesch JR, Verstrepen KJ, Froyen G. 2014. Large-scale analysis of tandem repeat variability in the human genome. Nucleic Acids Res 42: 5728-5741.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 5728-5741
-
-
Duitama, J.1
Zablotskaya, A.2
Gemayel, R.3
Jansen, A.4
Belet, S.5
Vermeesch, J.R.6
Verstrepen, K.J.7
Froyen, G.8
-
14
-
-
70349263950
-
Absence of collagen-induced platelet activation caused by compound heterozygous GPVI mutations
-
Dumont B, Lasne D, Rothschild C, Bouabdelli M, Ollivier V, Oudin C, Ajzenberg N, Grandchamp B, Jandrot-Perrus M. 2009. Absence of collagen-induced platelet activation caused by compound heterozygous GPVI mutations. Blood 114: 1900-1903.
-
(2009)
Blood
, vol.114
, pp. 1900-1903
-
-
Dumont, B.1
Lasne, D.2
Rothschild, C.3
Bouabdelli, M.4
Ollivier, V.5
Oudin, C.6
Ajzenberg, N.7
Grandchamp, B.8
Jandrot-Perrus, M.9
-
15
-
-
0034079715
-
Heterogeneous mutation processes in human microsatellite DNA sequences
-
Ellegren H. 2000. Heterogeneous mutation processes in human microsatellite DNA sequences. Nat Genet 24: 400-402.
-
(2000)
Nat Genet
, vol.24
, pp. 400-402
-
-
Ellegren, H.1
-
16
-
-
3042782819
-
Microsatellites: Simple sequences with complex evolution
-
Ellegren H. 2004. Microsatellites: simple sequences with complex evolution. Nat Rev Genet 5: 435-445.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 435-445
-
-
Ellegren, H.1
-
17
-
-
79957933956
-
Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans
-
Ewing AD, Kazazian HH Jr. 2011. Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans. Genome Res 21: 985-990.
-
(2011)
Genome Res
, vol.21
, pp. 985-990
-
-
Ewing, A.D.1
Kazazian, H.H.2
-
18
-
-
0041817568
-
Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
-
Falush D, Stephens M, Pritchard JK. 2003. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164: 1567-1587.
-
(2003)
Genetics
, vol.164
, pp. 1567-1587
-
-
Falush, D.1
Stephens, M.2
Pritchard, J.K.3
-
19
-
-
84858022527
-
Analysis of microsatellite variation in Drosophila melanogaster with population-scale genome sequencing
-
Fondon JW III, Martin A, Richards S, Gibbs RA, Mittelman D. 2012. Analysis of microsatellite variation in Drosophila melanogaster with population-scale genome sequencing. PLoS ONE 7: e33036.
-
(2012)
PLoS ONE
, vol.7
, pp. e33036
-
-
Fondon, J.W.1
Martin, A.2
Richards, S.3
Gibbs, R.A.4
Mittelman, D.5
-
20
-
-
0040886242
-
Modulation of epidermal growth factor receptor gene transcription by a polymorphic dinucleotide repeat in intron 1
-
Gebhardt F, Zanker KS, Brandt B. 1999. Modulation of epidermal growth factor receptor gene transcription by a polymorphic dinucleotide repeat in intron 1. J Biol Chem 274: 13176-13180.
-
(1999)
J Biol Chem
, vol.274
, pp. 13176-13180
-
-
Gebhardt, F.1
Zanker, K.S.2
Brandt, B.3
-
21
-
-
78149432728
-
Variable tandem repeats accelerate evolution of coding and regulatory sequences
-
Gemayel R, Vinces MD, Legendre M, Verstrepen KJ. 2010. Variable tandem repeats accelerate evolution of coding and regulatory sequences. Annu Rev Genet44: 445-477.
-
(2010)
Annu Rev Genet
, vol.44
, pp. 445-477
-
-
Gemayel, R.1
Vinces, M.D.2
Legendre, M.3
Verstrepen, K.J.4
-
22
-
-
84861861291
-
LobSTR: A short tandem repeat profiler for personal genomes
-
Gymrek M, Golan D, Rosset S, Erlich Y. 2012. lobSTR: a short tandem repeat profiler for personal genomes. Genome Res 22: 1154-1162.
-
(2012)
Genome Res
, vol.22
, pp. 1154-1162
-
-
Gymrek, M.1
Golan, D.2
Rosset, S.3
Erlich, Y.4
-
23
-
-
84872459720
-
Identifying personal genomes by surname inference
-
Gymrek M, McGuire AL, Golan D, Halperin E, Erlich Y. 2013. Identifying personal genomes by surname inference. Science 339: 321-324.
-
(2013)
Science
, vol.339
, pp. 321-324
-
-
Gymrek, M.1
McGuire, A.L.2
Golan, D.3
Halperin, E.4
Erlich, Y.5
-
24
-
-
0027523066
-
A study of the origin of 'shadow bands' seen when typing dinucleotide repeat polymorphisms by the PCR
-
Hauge X, Litt M. 1993. A study of the origin of 'shadow bands' seen when typing dinucleotide repeat polymorphisms by the PCR. Hum Mol Genet 2: 411-415.
-
(1993)
Hum Mol Genet
, vol.2
, pp. 411-415
-
-
Hauge, X.1
Litt, M.2
-
25
-
-
1542723471
-
A variable dinucleotide repeat in the CFTR gene contributes to phenotype diversity by forming RNA secondary structures that alter splicing
-
Hefferon TW, Groman JD, Yurk CE, Cutting GR. 2004. A variable dinucleotide repeat in the CFTR gene contributes to phenotype diversity by forming RNA secondary structures that alter splicing. Proc Natl Acad Sci 101: 3504-3509.
-
(2004)
Proc Natl Acad Sci
, vol.101
, pp. 3504-3509
-
-
Hefferon, T.W.1
Groman, J.D.2
Yurk, C.E.3
Cutting, G.R.4
-
26
-
-
67949091190
-
A compound heterozygous mutation in glycoprotein VI in a patient with a bleeding disorder
-
Hermans C, Wittevrongel C, Thys C, Smethurst P, Van Geet C, Freson K. 2009. A compound heterozygous mutation in glycoprotein VI in a patient with a bleeding disorder. J Thromb Haemost 7: 1356-1363.
-
(2009)
J Thromb Haemost
, vol.7
, pp. 1356-1363
-
-
Hermans, C.1
Wittevrongel, C.2
Thys, C.3
Smethurst, P.4
Van Geet, C.5
Freson, K.6
-
27
-
-
84871774158
-
Accurate human microsatellite genotypes from high-throughput resequencing data using informed error profiles
-
Highnam G, Franck C, Martin A, Stephens C, Puthige A, Mittelman D. 2013. Accurate human microsatellite genotypes from high-throughput resequencing data using informed error profiles. Nucleic Acids Res 41: e32.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. e32
-
-
Highnam, G.1
Franck, C.2
Martin, A.3
Stephens, C.4
Puthige, A.5
Mittelman, D.6
-
28
-
-
84975806579
-
Alu repeat discovery and characterization within human genomes
-
Hormozdiari F, Alkan C, Ventura M, Hajirasouliha I, Malig M, Hach F, Yorukoglu D, Dao P, Bakhshi M, Sahinalp SC. 2011. Alu repeat discovery and characterization within human genomes. Genome Res 21: 840-849.
-
(2011)
Genome Res
, vol.21
, pp. 840-849
-
-
Hormozdiari, F.1
Alkan, C.2
Ventura, M.3
Hajirasouliha, I.4
Malig, M.5
Hach, F.6
Yorukoglu, D.7
Dao, P.8
Bakhshi, M.9
Sahinalp, S.C.10
-
29
-
-
0037217365
-
HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats
-
Hui J, Stangl K, Lane WS, Bindereif A. 2003. HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats. Nat Struct Biol 10: 33-37.
-
(2003)
Nat Struct Biol
, vol.10
, pp. 33-37
-
-
Hui, J.1
Stangl, K.2
Lane, W.S.3
Bindereif, A.4
-
30
-
-
85050315080
-
Microsatellite markers for genome-wide association studies
-
Jorgenson E, Witte JS. 2007. Microsatellite markers for genome-wide association studies. Nat Rev Genet 8.
-
(2007)
Nat Rev Genet
, pp. 8
-
-
Jorgenson, E.1
Witte, J.S.2
-
31
-
-
79951787403
-
Improving human forensics through advances in genetics, genomics and molecular biology
-
Kayser M, de Knijff P. 2011. Improving human forensics through advances in genetics, genomics and molecular biology. Nat Rev Genet 12: 179-192.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 179-192
-
-
Kayser, M.1
De Knijff, P.2
-
32
-
-
38049048656
-
The genome-wide determinants of human and chimpanzee microsatellite evolution
-
Kelkar YD, Tyekucheva S, Chiaromonte F, Makova KD. 2008. The genome-wide determinants of human and chimpanzee microsatellite evolution. Genome Res 18: 30-38.
-
(2008)
Genome Res
, vol.18
, pp. 30-38
-
-
Kelkar, Y.D.1
Tyekucheva, S.2
Chiaromonte, F.3
Makova, K.D.4
-
33
-
-
77958483312
-
What is a microsatellite: A computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats
-
Kelkar YD, Strubczewski N, Hile SE, Chiaromonte F, Eckert KA, Makova KD. 2010. What is a microsatellite: a computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats. Genome Biol Evol 2: 620-635.
-
(2010)
Genome Biol Evol
, vol.2
, pp. 620-635
-
-
Kelkar, Y.D.1
Strubczewski, N.2
Hile, S.E.3
Chiaromonte, F.4
Eckert, K.A.5
Makova, K.D.6
-
34
-
-
83055187907
-
A matter of life or death: How microsatellites emerge in and vanish from the human genome
-
Kelkar YD, Eckert KA, Chiaromonte F, Makova KD. 2011. A matter of life or death: how microsatellites emerge in and vanish from the human genome. Genome Res 21: 2038-2048.
-
(2011)
Genome Res
, vol.21
, pp. 2038-2048
-
-
Kelkar, Y.D.1
Eckert, K.A.2
Chiaromonte, F.3
Makova, K.D.4
-
35
-
-
84888215860
-
Rumors of the death of consumer genomics are greatly exaggerated
-
Khan R, Mittelman D. 2013. Rumors of the death of consumer genomics are greatly exaggerated. Genome Biol 14: 139.
-
(2013)
Genome Biol
, vol.14
, pp. 139
-
-
Khan, R.1
Mittelman, D.2
-
36
-
-
84874662323
-
Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing
-
Kirby A, Gnirke A, Jaffe DB, Baresova V, Pochet N, Blumenstiel B, Ye C, Aird D, Stevens C, Robinson JT. 2013. Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing. Nat Genet 45: 299-303.
-
(2013)
Nat Genet
, vol.45
, pp. 299-303
-
-
Kirby, A.1
Gnirke, A.2
Jaffe, D.B.3
Baresova, V.4
Pochet, N.5
Blumenstiel, B.6
Ye, C.7
Aird, D.8
Stevens, C.9
Robinson, J.T.10
-
37
-
-
0347356456
-
The relationship between microsatellite slippage mutation rate and the number of repeat units
-
Lai Y, Sun F. 2003. The relationship between microsatellite slippage mutation rate and the number of repeat units. Mol Biol Evol 20: 2123-2131.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 2123-2131
-
-
Lai, Y.1
Sun, F.2
-
38
-
-
34249009076
-
Detecting microsatellites within genomes: Significant variation among algorithms
-
Leclercq S, Rivals E, Jarne P. 2007. Detecting microsatellites within genomes: significant variation among algorithms. BMC Bioinformatics 8: 125.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 125
-
-
Leclercq, S.1
Rivals, E.2
Jarne, P.3
-
39
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, 1000 Genome Project Data Processing Subgroup. 2009. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25: 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
40
-
-
70349956433
-
Finding the missing heritability of complex diseases
-
Manolio TA, Collins FS, Cox NJ, Goldstein DB, Hindorff LA, Hunter DJ, McCarthy MI, Ramos EM, Cardon LR, Chakravarti A. 2009. Finding the missing heritability of complex diseases. Nature 461: 747-753.
-
(2009)
Nature
, vol.461
, pp. 747-753
-
-
Manolio, T.A.1
Collins, F.S.2
Cox, N.J.3
Goldstein, D.B.4
Hindorff, L.A.5
Hunter, D.J.6
McCarthy, M.I.7
Ramos, E.M.8
Cardon, L.R.9
Chakravarti, A.10
-
41
-
-
84873256857
-
Population-scale analysis of human microsatellites reveals novel sources of exonic variation
-
McIver L, McCormick J, Martin A, Fondon J III, Garner H. 2013. Population-scale analysis of human microsatellites reveals novel sources of exonic variation. Gene 516: 328-334.
-
(2013)
Gene
, vol.516
, pp. 328-334
-
-
McIver, L.1
McCormick, J.2
Martin, A.3
Fondon, J.4
Garner, H.5
-
42
-
-
34250878426
-
Expandable DNA repeats and human disease
-
Mirkin SM. 2007. Expandable DNA repeats and human disease. Nature 447: 932-940.
-
(2007)
Nature
, vol.447
, pp. 932-940
-
-
Mirkin, S.M.1
-
43
-
-
70350125551
-
Triplet repeat length bias and variation in the human transcriptome
-
Molla M, Delcher A, Sunyaev S, Cantor C, Kasif S. 2009. Triplet repeat length bias and variation in the human transcriptome. Proc Natl Acad Sci 106: 17095-17100.
-
(2009)
Proc Natl Acad Sci
, vol.106
, pp. 17095-17100
-
-
Molla, M.1
Delcher, A.2
Sunyaev, S.3
Cantor, C.4
Kasif, S.5
-
44
-
-
84876523427
-
The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes
-
Montgomery SB, Goode DL, Kvikstad E, Albers CA, Zhang ZD, Mu XJ, Ananda G, Howie B, Karczewski KJ, Smith KS. 2013. The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes. Genome Res 23: 749-761.
-
(2013)
Genome Res
, vol.23
, pp. 749-761
-
-
Montgomery, S.B.1
Goode, D.L.2
Kvikstad, E.3
Albers, C.A.4
Zhang, Z.D.5
Mu, X.J.6
Ananda, G.7
Howie, B.8
Karczewski, K.J.9
Smith, K.S.10
-
45
-
-
33745480704
-
Origin, evolution and genome distribution of microsatellites
-
Oliveira EJ, Padua JG, Zucchi MI, Vencovsky R, Vieira MLC. 2006. Origin, evolution and genome distribution of microsatellites. Genet Mol Biol 29: 294-307.
-
(2006)
Genet Mol Biol
, vol.29
, pp. 294-307
-
-
Oliveira, E.J.1
Padua, J.G.2
Zucchi, M.I.3
Vencovsky, R.4
Vieira, M.L.C.5
-
46
-
-
42749092332
-
Linkage disequilibrium between STRPs and SNPs across the human genome
-
Payseur BA, Place M, Weber JL. 2008. Linkage disequilibrium between STRPs and SNPs across the human genome. Am J Hum Genet 82: 1039-1050.
-
(2008)
Am J Hum Genet
, vol.82
, pp. 1039-1050
-
-
Payseur, B.A.1
Place, M.2
Weber, J.L.3
-
47
-
-
78650437255
-
A genomic portrait of human microsatellite variation
-
Payseur BA, Jing P, Haasl RJ. 2011. A genomic portrait of human microsatellite variation. Mol Biol Evol 28: 303-312.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 303-312
-
-
Payseur, B.A.1
Jing, P.2
Haasl, R.J.3
-
48
-
-
25844438495
-
Repeat instability: Mechanisms of dynamic mutations
-
Pearson CE, Edamura KN, Cleary JD. 2005. Repeat instability: mechanisms of dynamic mutations. Nat Rev Genet 6: 729-742.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 729-742
-
-
Pearson, C.E.1
Edamura, K.N.2
Cleary, J.D.3
-
50
-
-
30044440451
-
Genotyping errors: Causes, consequences and solutions
-
Pompanon F, Bonin A, Bellemain E, Taberlet P. 2005. Genotyping errors: causes, consequences and solutions. Nat Rev Genet 6: 847-859.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 847-859
-
-
Pompanon, F.1
Bonin, A.2
Bellemain, E.3
Taberlet, P.4
-
51
-
-
84927562442
-
The overdue promise of short tandem repeat variation for heritability
-
Press M, Carlson KD, Queitsch C. 2014. The overdue promise of short tandem repeat variation for heritability. Trends Genetdoi: 10.1016/j.tig.2014.07.008.
-
(2014)
Trends Genet
-
-
Press, M.1
Carlson, K.D.2
Queitsch, C.3
-
52
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
53
-
-
0037147189
-
Genetic structure of human populations
-
Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW 2002. Genetic structure of human populations. Science 298: 2381-2385.
-
(2002)
Science
, vol.298
, pp. 2381-2385
-
-
Rosenberg, N.A.1
Pritchard, J.K.2
Weber, J.L.3
Cann, H.M.4
Kidd, K.K.5
Zhivotovsky, L.A.6
Feldman, M.W.7
-
54
-
-
33750437374
-
Clines, clusters, and the effect of study design on the inference of human population structure
-
Rosenberg NA, Mahajan S, Ramachandran S, Zhao C, Pritchard JK, Feldman MW. 2005. Clines, clusters, and the effect of study design on the inference of human population structure. PLoS Genet 1: e70.
-
(2005)
PLoS Genet
, vol.1
, pp. e70
-
-
Rosenberg, N.A.1
Mahajan, S.2
Ramachandran, S.3
Zhao, C.4
Pritchard, J.K.5
Feldman, M.W.6
-
55
-
-
0035166931
-
STRBase: A short tandem repeat DNA database for the human identity testing community
-
Ruitberg CM, Reeder DJ, Butler JM. 2001. STRBase: a short tandem repeat DNA database for the human identity testing community. Nucleic Acids Res 29: 320-322.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 320-322
-
-
Ruitberg, C.M.1
Reeder, D.J.2
Butler, J.M.3
-
56
-
-
84873463075
-
Aberrant splicing of HTT generates the pathogenic exon 1 protein in Huntington disease
-
Sathasivam K, Neueder A, Gipson TA, Landles C, Benjamin AC, Bondulich MK, Smith DL, Faull RL, Roos RA, Howland D, et al. 2013. Aberrant splicing of HTT generates the pathogenic exon 1 protein in Huntington disease. Proc Natl Acad Sci 110: 2366-2370.
-
(2013)
Proc Natl Acad Sci
, vol.110
, pp. 2366-2370
-
-
Sathasivam, K.1
Neueder, A.2
Gipson, T.A.3
Landles, C.4
Benjamin, A.C.5
Bondulich, M.K.6
Smith, D.L.7
Faull, R.L.8
Roos, R.A.9
Howland, D.10
-
57
-
-
0031442734
-
Natural variation in a Drosophila clock gene and temperature compensation
-
Sawyer LA, Hennessy JM, Peixoto AA, Rosato E, Parkinson H, Costa R, Kyriacou CP 1997. Natural variation in a Drosophila clock gene and temperature compensation. Science 278: 2117-2120.
-
(1997)
Science
, vol.278
, pp. 2117-2120
-
-
Sawyer, L.A.1
Hennessy, J.M.2
Peixoto, A.A.3
Rosato, E.4
Parkinson, H.5
Costa, R.6
Kyriacou, C.P.7
-
58
-
-
84869038024
-
Repeat or not repeat?-statistical validation of tandem repeat prediction in genomic sequences
-
Schaper E, Kajava AV, Hauser A, Anisimova M. 2012. Repeat or not repeat?-statistical validation of tandem repeat prediction in genomic sequences. Nucleic Acids Res 40: 10005-10017.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 10005-10017
-
-
Schaper, E.1
Kajava, A.V.2
Hauser, A.3
Anisimova, M.4
-
59
-
-
0033031593
-
Shortened microsatellite d(CA)21 sequence down-regulates promoter activity of matrix metalloproteinase 9 gene
-
Shimajiri S, Arima N, Tanimoto A, Murata Y, Hamada T, Wang KY, Sasaguri Y 1999. Shortened microsatellite d(CA)21 sequence down-regulates promoter activity of matrix metalloproteinase 9 gene. FEBS Lett 455: 70-74.
-
(1999)
FEBS Lett
, vol.455
, pp. 70-74
-
-
Shimajiri, S.1
Arima, N.2
Tanimoto, A.3
Murata, Y.4
Hamada, T.5
Wang, K.Y.6
Sasaguri, Y.7
-
60
-
-
0028816747
-
A measure of population subdivision based on microsatellite allele frequencies
-
Slatkin M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
-
(1995)
Genetics
, vol.139
, pp. 457-462
-
-
Slatkin, M.1
-
61
-
-
80052013378
-
Learning about human population history from ancient and modern genomes
-
Stoneking M, Krause J. 2011. Learning about human population history from ancient and modern genomes. Nat Rev Genet 12: 603-614.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 603-614
-
-
Stoneking, M.1
Krause, J.2
-
62
-
-
84866912512
-
A direct characterization of human mutation based on microsatellites
-
Sun JX, Helgason A, Masson G, Ebenesersdottir SS, Li H, Mallick S, Gnerre S, Patterson N, Kong A, Reich D. 2012. A direct characterization of human mutation based on microsatellites. Nat Genet 44: 1161-1165.
-
(2012)
Nat Genet
, vol.44
, pp. 1161-1165
-
-
Sun, J.X.1
Helgason, A.2
Masson, G.3
Ebenesersdottir, S.S.4
Li, H.5
Mallick, S.6
Gnerre, S.7
Patterson, N.8
Kong, A.9
Reich, D.10
-
63
-
-
26444577151
-
Whole genome association study of rheumatoid arthritis using 27 039 microsatellites
-
Tamiya G, Shinya M, Imanishi T, Ikuta T, Makino S, Okamoto K, Furugaki K, Matsumoto T, Mano S, Ando S. 2005. Whole genome association study of rheumatoid arthritis using 27 039 microsatellites. Hum Mol Genet 14: 2305-2321.
-
(2005)
Hum Mol Genet
, vol.14
, pp. 2305-2321
-
-
Tamiya, G.1
Shinya, M.2
Imanishi, T.3
Ikuta, T.4
Makino, S.5
Okamoto, K.6
Furugaki, K.7
Matsumoto, T.8
Mano, S.9
Ando, S.10
-
64
-
-
84863556835
-
Evolution and functional impact of rare coding variation from deep sequencing of human exomes
-
Tennessen JA, Bigham AW, O'Connor TD, Fu W, Kenny EE, Gravel S, McGee S, Do R, Liu X, Jun G, et al. 2012. Evolution and functional impact of rare coding variation from deep sequencing of human exomes. Science 337: 64-69.
-
(2012)
Science
, vol.337
, pp. 64-69
-
-
Tennessen, J.A.1
Bigham, A.W.2
O'Connor, T.D.3
Fu, W.4
Kenny, E.E.5
Gravel, S.6
McGee, S.7
Do, R.8
Liu, X.9
Jun, G.10
-
65
-
-
0035919696
-
Haplotype diversity and linkage disequilibrium at human G6PD: Recent origin of alleles that confer malarial resistance
-
Tishkoff SA, Varkonyi R, Cahinhinan N, Abbes S, Argyropoulos G, Destro-Bisol G, Drousiotou A, Dangerfield B, Lefranc G, Loiselet J. 2001. Haplotype diversity and linkage disequilibrium at human G6PD: recent origin of alleles that confer malarial resistance. Science 293: 455-462.
-
(2001)
Science
, vol.293
, pp. 455-462
-
-
Tishkoff, S.A.1
Varkonyi, R.2
Cahinhinan, N.3
Abbes, S.4
Argyropoulos, G.5
Destro-Bisol, G.6
Drousiotou, A.7
Dangerfield, B.8
Lefranc, G.9
Loiselet, J.10
-
66
-
-
83855165105
-
Repetitive DNA and next-generation sequencing: Computational challenges and solutions
-
Treangen TJ, Salzberg SL. 2012. Repetitive DNA and next-generation sequencing: computational challenges and solutions. Nat Rev Genet 13: 36-46.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 36-46
-
-
Treangen, T.J.1
Salzberg, S.L.2
-
67
-
-
66349113764
-
Unstable tandem repeats in promoters confer transcriptional evolvability
-
Vinces MD, Legendre M, Caldara M, Hagihara M, Verstrepen KJ. 2009. Unstable tandem repeats in promoters confer transcriptional evolvability. Science 324: 1213-1216.
-
(2009)
Science
, vol.324
, pp. 1213-1216
-
-
Vinces, M.D.1
Legendre, M.2
Caldara, M.3
Hagihara, M.4
Verstrepen, K.J.5
-
68
-
-
0027161022
-
Mutation of human short tandem repeats
-
Weber JL, Wong C. 1993. Mutation of human short tandem repeats. Hum Mol Genet 2: 1123-1128.
-
(1993)
Hum Mol Genet
, vol.2
, pp. 1123-1128
-
-
Weber, J.L.1
Wong, C.2
-
69
-
-
0038463583
-
Likelihood-based estimation of microsatellite mutation rates
-
Whittaker JC, Harbord RM, Boxall N, Mackay I, Dawson G, Sibly RM. 2003. Likelihood-based estimation of microsatellite mutation rates. Genetics 164: 781-787.
-
(2003)
Genetics
, vol.164
, pp. 781-787
-
-
Whittaker, J.C.1
Harbord, R.M.2
Boxall, N.3
Mackay, I.4
Dawson, G.5
Sibly, R.M.6
-
70
-
-
0034111151
-
The direction of microsatellite mutations is dependent upon allele length
-
Xu X, Peng M, Fang Z. 2000. The direction of microsatellite mutations is dependent upon allele length. Nat Genet 24: 396-399.
-
(2000)
Nat Genet
, vol.24
, pp. 396-399
-
-
Xu, X.1
Peng, M.2
Fang, Z.3
|