Comprehensive human genetic maps: Individual and sex-specific variation in recombination

American Journal of Human Genetics

Volumn 63, Issue 3, 1998, Pages 861-869

  Broman, Karl W ^a   Murray, Jeffrey C ^b,c   Sheffield, Val C ^b,d   White, Raymond L ^e   Weber, James L ^a  

^a MARSHFIELD CLINIC   (United States)

^b Department of Pediatrics ^*  (United States)

^c UNIVERSITY OF IOWA   (United States)

^d HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^e UNIVERSITY OF UTAH SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CENTROMERE; CHROMOSOME ANALYSIS; FEMALE; GENE MAPPING; GENE MUTATION; GENETIC LINKAGE; GENETIC MARKER; GENETIC RECOMBINATION; GENOTYPE; HUMAN; MALE; PRIORITY JOURNAL;

EID: 0032231877     PISSN: 00029297     EISSN: None     Source Type: Journal    
DOI: 10.1086/302011     Document Type: Article

References (37)

1. Banchs I, Bosch A, Guimerà J, Lázaro C, Puig A, Estivill X (1994) New alleles at microsatellite loci in CEPH families mainly arise from somatic mutations in the lymphoblastoid cell lines. Hum Mutat 3:365-372
2. Benson DA, Boguski MS, Lipman DJ, Ostell J, Ouellette BFF (1998) Genbank. Nucleic Acids Res 26:1-7
3. Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32: 314-331
4. Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, et al (1997) A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb. Genome Res 7:673-692
5. Buetow KH (1991) Influence of aberrant observations on high-resolution linkage analysis outcomes. Am J Hum Genet 49: 985-994
6. Buetow KH, Weber JL, Judwigsen S, Scherpbier-Heddema T, Duyk GM, Sheffield VC, Murray JC (1994) Integrated genome-wide maps constructed using the CEPH reference panel. Nat Genet 6:391-393
7. Choo KHA (1998) Turning on the centromere. Nat Genet 18: 3-4
8. Dausset J, Cann H, Cohen D, Lathrop M, Lalouel JM, White R (1990) Centre d'Etude du Polymorphisme Humain (CEPH): collaborative genetic mapping of the human genome. Genomics 6:575-577
9. Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, et al (1996) A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature 380:152-154
10. Donis-Keller H, Green P, Helms C, Cartinhour S, Weiffenbach B, Stephens K, Keith TP, et al (1987) A genetic linkage map of the human genome. Cell 51:319-337
11. du Sart D, Cancilla MR, Earle E, Mao JI, Saffery R, Tainton KM, Kalitsis P, et al (1998) A functional neo-centromere formed through activation of a latent human centromere and consisting of non-alpha-satellite DNA. Nat Genet 16: 144-153
12. Fain PR, Kort EN, Chance PF, Nguyen K, Redd DF, Econs MJ, Barker DF (1995) A 2D crossover-based map of the human X chromosome as a model for map integration. Nat Genet 9:261-266
13. Fain PR, Kort EN, Yousry C, James MR, Litt M (1996) A high resolution CEPH crossover mapping panel and integrated map of chromosome 11. Hum Mol Genet 5: 1631-1636
14. Gyapay G, Morissette J, Vignal A, Dib C, Fizames C, Millasseau P, March S, et al (1994) The 1993-1994 Généthon human genetic linkage map. Nat Genet 7:246-339
15. Heyer E, Puymirat J, Dieltjes P, Bakker E, de Knijff P (1997) Estimating Y chromosome specific microsatellite mutation frequencies using deep rooting pedigrees. Hum Mol Genet 6:799-803
16. Hudson TJ, Stein LD, Gerety S, Ma J, Castle AB, Silva J, Slonim DK, et al (1995) An STS-based map of the human genome. Science 270:1945-1954
17. Jeffreys AJ, Tamaki K, MacLeod A, Monckton G, Neil DL, Armour JAL (1994) Complex gene conversion events in germline mutation at human minisatellites. Nat Genet 6: 136-145
18. Lander ES, Green P (1987) Construction of multilocus genetic linkage maps in humans. Proc Natl Acad Sci USA 84: 2363-2367
19. Manly BFJ (1997) Randomization, bootstrap and Monte Carlo methods in biology. Chapman & Hall, London
20. Matise T, Perlin M, Chakravarti A (1994) Automated construction of genetic linkage maps using an expert system (MultiMap): a human genome linkage map. Nat Genet 6: 384-390
21. Mohrenweiser HW, Tsujimoto S, Gordon L, Olsen AS (1998) Regions of sex-specific hypo-and hyper-recombination identified through integration of 180 genetic markers into the metric physical map of human chromosome 19. Genomics 47:153-162
22. Murray JC, Buetow KH, Weber JL, Ludwigsen S, Scherpbier-Heddema T, Manion F, Quillen J, et al (1994) A comprehensive human linkage map with centimorgan density. Science 265:2049-2054
23. NIH/CEPH Collaborative Mapping Group (1992) A comprehensive genetic linkage map of the human genome. Science 258:67-86
24. O'Connell P, Leach RJ, Rains D, Taylor T, Gargia D, Ballard L, Holik P, et al (1994) A PCR-based genetic map for human chromosome 3. Genomics 24:557-567
25. Robinson WP (1996) The extent, mechanism, and consequences of genetic variation, for recombination rate. Am J Hum Genet 59:1175-1183
26. Rosenberg M, Hui L, Ma J, Nusbaum HC, Clark K, Robertson L, Dziadzio L, et al (1997) Characterization of short tandem repeats from thirty-one human telomeres. Genome Res 7: 917-923
27. Sheffield VC, Weber JL, Buetow KH, Murray JC, Even DA, Wiles K, Gastier JM, et al (1995) A collection of tri-and tetranucleotide repeat markers used to generate high quality, high resolution human genome-wide linkage maps. Hum Mol Genet 4:1837-1844
28. Shen Y, Kozman HM, Thompson A, Phillips HA, Holman K, Nancarrow J, Lane S, et al (1994) A PCR based genetic linkage map of human chromosome 16. Genomics 22:68-76
29. Sunden SL, Businga T, Beck J, McClain A, Gastier JM, Pulido JC, Yandava CN, et al (1996) Chromosomal assignment of 2900 tri-and tetranucleotide repeat markers using NIGMS somatic cell hybrid panel 2. Genomics 32:15-20
30. Tomfohrde J, Wood S, Schertzer M, Wagner MJ, Wells DE, Parrish J, Sadler LA, et al (1992) Human chromosome 8 linkage map based on short tandem repeat polymorphisms: effect of genotyping errors. Genomics 14:144-152
31. Utah Marker Development Group (1995) A collection of ordered tetranucleotide-repeat markers from the human genome. Am J Hum Genet 57:619-628
32. Venables WN, Ripley BD (1994) Modern applied statistics with S-Plus. Springer-Verlag, New York
33. Weber JL, May PE (1989) Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388-396
34. Weber JL, Wang Z, Hansen K, Stephenson M, Kappel C, Salzman S, Wilkie PJ, et al (1993) Evidence for human meiotic recombination interference obtained through construction of a short tandem repeat-polymorphism linkage map of chromosome 19. Am J Hum Genet 53:1079-1095
35. Weber JL, Wong C (1993) Mutation in human short tandem repeat polymorphisms. Hum Mol Genet 2:1123-1128
36. Yu J, Lazzeroni L, Qin J, Huang M-M, Navidi W, Erlich H, Arnheim N (1996) Individual variation in recombination among human males. Am J Hum Genet 59:1186-1192
37. Zahn LM, Kwiatkowski DJ (1995) A 37-marker PCR-based genetic linkage map of human chromosome 9: observations on mutations and positive interference. Genomics 28: 140-146