Population data on the thirteen CODIS core short tandem repeat loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians

Journal of Forensic Sciences

Volumn 44, Issue 6, 1999, Pages 1277-1286

  Budowle, Bruce ^a   Moretti, Tamyra R ^a   Baumstark, Anne L ^a   Defenbaugh, Debra A ^a   Keys, Kathleen M ^a  

^a Federal Bureau of Investigation   (United States)

Author keywords

African American; Bahamian; Caucasian; CODIS core loci; CSF1PO; D13S317; D16S539; D18S5 1; D21S11; D3S1358; D5S818; D7S820; DNA typing; FGA; Forensic science; Hispanic; Jamaican; Population genetics; TH01; TPOX; Trinidadian; VWA

Indexed keywords

ALLELE; ARTICLE; CAUCASIAN; DATA BASE; ETHNIC GROUP; FORENSIC MEDICINE; GENE LOCUS; HUMAN; POPULATION GENETICS; PRIORITY JOURNAL; TANDEM REPEAT;

EID: 0032741103     PISSN: 00221198     EISSN: None     Source Type: Journal    
DOI: 10.1520/jfs14601j     Document Type: Article

References (27)

1. Budowle B, Moretti TR, Niezgoda SJ, Brown BL. CODIS and PCR-based short tandem repeat loci: Law enforcement tools. In: Second European Symposium on Human Identification 1998, Promega Corporation, Madison, Wisconsin 73-88.
2. Edwards A, Civitello A, Hammond HA, Caskey CT. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Amer J Hum Genet 1991;49:746-56.
3. Edwards A, Hammond HA, Jin L, Caskey CT, Chakraborty R. Genetic variation at five trimeric and tetrameric repeat loci in four human population groups. Genomics 1992;12:241-53.
4. Polymeropoulos MH, Xiao H, Rath DS, Merril CR. Tetranucleotide repeat polymorphism at the human coagulation factor XIII A subunit gene (F13A1). Nuc Acids Res 1991;19:4036.
5. Sullivan KM, Pope S, Gill P, Robertson JM. Automated DNA profiling by fluorescent labeling of PCR products. PCR Meth Appl 1992;2: 34-40.
6. Comey CT, Koons BW, Presley KW, Smerick JB, Sobieralski CA, Stanley DM, et al. DNA extraction strategies for amplified fragment length polymorphism analysis. J Forensic Sci 1994;39:1254-69.
7. Waye JS, Presley L, Budowle B, Shutler GG, Fourney RM. A simple method for quantifying human genomic DNA in forensic specimen extracts. BioTechniques 1989;7:852-5.
8. Budowle B, Baechtel FS, Comey CT, Giusti AM, Klevan L. Simple protocols for typing forensic biological evidence: chemiluminescent detection for human DNA quantitation and RFLP analyses and manual typing of PCR amplified polymorphisms. Electrophoresis 1995;16: 1559-67.
9. Moretti TR, Koons BW, Budowle B. Enhancement of PCR amplification yield and specificity using AmpliTaq Gold™ DNA polymerase. BioTechniques 1998;25:716-22.
10. Chakraborty R, Smouse PE, Neel JV. Population amalgamation and genetic variation: observations on artificially agglomerated tribal populations of Central and South America. Amer J Hum Genet 1988;43: 709-25.
11. Chakraborty R, Fornage M, Guegue R, Boerwinkle E. Population genetics of hypervariable loci: analysis of PCR based VNTR polymorphism within a population. In: Burke T, Dolf G, Jeffreys AJ, Wolff R, editors. DNA fingerprinting: approaches and applications. Birkhauser Verlag, Berlin. 1991;127-43.
12. Nei M, Roychoudhury AK. Sampling variances of heterozygosity and genetic distance. Genetics 1974;76:379-90.
13. Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 1978;89:583-90.
14. Guo SW, Thompson EA. Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 1992;48:361-72.
15. Karlin S, Cameron EC, Williams PT. Sibling and parent-offspring correlation estimation with variable family size. Proc Natl Acad Sci USA 1981;78: 2664-8.
16. 2 and the problem of small samples. Mol Biol Evol 1989;6:539-45.
17. Lewontin RC, Felsenstein J. The robustness of homogeneity tests in 2 X N tables. Biometrics 1965;21:19-33.
18. Weir BS. Multiple tests. In: Genetic data analysis. Sinauer Associates, Inc., Sunderland, MA, 1990;109-10.
19. Lins AM, Micka KA, Sprecher CJ, Taylor JA, Bacher JW, Rabbach DR, et al. Development and population study of an eight-locus short tandem repeat (STR) multiplex system. J Forensic Sci 1998;43:1168-80.
20. Kupferschmid TD, Calicchio T, Budowle B. Maine Caucasian population DNA database using twelve short tandem repeat loci. J Forensic Sci 1999;44:392-5.
21. Gehrig C, Hochmeister M, Borer UV, Budowle B. Swiss Caucasian population DNA data for 13 STR loci using AmpF1STR Profiler Plus and COfiler PCR amplification kits. Forensic Sci Int (in press).
22. Entrala C, Lorente M, Lorente JA, Alvarez JC, Moretti T, Budowle B, et al. Fluorescent multiplex analysis of nine STR loci and the amelogenin locus: Spanish population data. Forensic Sci Int 1998;98:179-83.
23. Garofano L, Pizzamiglio M, Vecchio C, Lago G, Floris T, D'Errico G, et al. Italian population data on thirteen short tandem repeat loci: TH01, D21S11, D18S51, VWA, FGA, D8S1179, TPOX, CSF1PO, D16S539, D7S820, D13S317, D5S818, D3S1358. Forensic Sci Int 1998;97:53-60.
24. National Research Council II Report. The evaluation of forensic evidence. National Academy Press, Washington, DC, 1996.
25. Budowle B, Smerick JB, Keys KM, Moretti TR. United States population data on the multiplex short tandem repeat loci - HUMTH01, TPOX, and CSF1PO and the variable number tandem repeat locus D1S80. J Forensic Sci 1997;42:846-9.
26. Kline MC, Jenkins B, Rodgers S. Non-amplification of a vWA allele. J Forensic Sci 1998;43:250.
27. Walsh S. Commentary on Kline MC, Jenkins B, Rodgers S. Non-amplification of a vWA allele. J Forensic Sci 1998;43:1103-4.