-
1
-
-
50249147367
-
The flavivirus polymerase as a target for drug discovery
-
H. Malet, N. Massé, B. Selisko, J.-L. Romette, K. Alvarez, J.C. Guillemot, H. Tolou, T.L. Yap, S. Vasudevan, and J. Lescar The flavivirus polymerase as a target for drug discovery Antiviral Res 80 2008 23 35
-
(2008)
Antiviral Res
, vol.80
, pp. 23-35
-
-
Malet, H.1
Massé, N.2
Selisko, B.3
Romette, J.-L.4
Alvarez, K.5
Guillemot, J.C.6
Tolou, H.7
Yap, T.L.8
Vasudevan, S.9
Lescar, J.10
-
2
-
-
84893270975
-
Noncoding subgenomic flavivirus RNA: Multiple functions in West Nile virus pathogenesis and modulation of host responses
-
J.A. Roby, G.P. Pijlman, J. Wilusz, and A.A. Khromykh Noncoding subgenomic flavivirus RNA: multiple functions in West Nile virus pathogenesis and modulation of host responses Viruses 6 2014 404 427
-
(2014)
Viruses
, vol.6
, pp. 404-427
-
-
Roby, J.A.1
Pijlman, G.P.2
Wilusz, J.3
Khromykh, A.A.4
-
3
-
-
84891441339
-
Replication cycle and molecular biology of the West Nile virus
-
M.A. Brinton Replication cycle and molecular biology of the West Nile virus Viruses 6 2014 13 53
-
(2014)
Viruses
, vol.6
, pp. 13-53
-
-
Brinton, M.A.1
-
4
-
-
84897053354
-
Flavivirus RNA methylation
-
H. Dong, K. Fink, R. Züst, S.P. Lim, C.-F. Qin, and P.-Y. Shi Flavivirus RNA methylation J Gen Virol 95 2014 763 778
-
(2014)
J Gen Virol
, vol.95
, pp. 763-778
-
-
Dong, H.1
Fink, K.2
Züst, R.3
Lim, S.P.4
Qin, C.-F.5
Shi, P.-Y.6
-
5
-
-
84885763719
-
Regulation of flavivirus RNA synthesis and capping
-
B.J. Saeedi, and B.J. Geiss Regulation of flavivirus RNA synthesis and capping Wiley Interdiscip Rev RNA 4 2013 723 735
-
(2013)
Wiley Interdiscip Rev RNA
, vol.4
, pp. 723-735
-
-
Saeedi, B.J.1
Geiss, B.J.2
-
6
-
-
83855162132
-
Conventional and unconventional mechanisms for capping viral mRNA
-
E. Decroly, F. Ferron, J. Lescar, and B. Canard Conventional and unconventional mechanisms for capping viral mRNA Nat Rev Microbiol 10 2012 51 65
-
(2012)
Nat Rev Microbiol
, vol.10
, pp. 51-65
-
-
Decroly, E.1
Ferron, F.2
Lescar, J.3
Canard, B.4
-
7
-
-
84899845392
-
Dengue virus- and hepatitis C virus-induced replication and assembly compartments: The enemy inside-caught in the web
-
L. Chatel-Chaix, and R. Bartenschlager Dengue virus- and hepatitis C virus-induced replication and assembly compartments: the enemy inside-caught in the web J Virol 88 2014 5907 5911
-
(2014)
J Virol
, vol.88
, pp. 5907-5911
-
-
Chatel-Chaix, L.1
Bartenschlager, R.2
-
8
-
-
64649097038
-
Composition and three-dimensional architecture of the dengue virus replication and assembly sites
-
S. Welsch, S. Miller, I. Romero-Brey, A. Merz, C.K.E. Bleck, P. Walther, S.D. Fuller, C. Antony, J. Krijnse-Locker, and R. Bartenschlager Composition and three-dimensional architecture of the dengue virus replication and assembly sites Cell Host Microbe 5 2009 365 375
-
(2009)
Cell Host Microbe
, vol.5
, pp. 365-375
-
-
Welsch, S.1
Miller, S.2
Romero-Brey, I.3
Merz, A.4
Bleck, C.K.E.5
Walther, P.6
Fuller, S.D.7
Antony, C.8
Krijnse-Locker, J.9
Bartenschlager, R.10
-
9
-
-
84866901236
-
Molecular basis for nucleotide conservation at the ends of the dengue virus genome
-
B. Selisko, S. Potisopon, R. Agred, S. Priet, I. Varlet, Y. Thillier, C. Sallamand, F. Debart, J.-J. Vasseur, and B. Canard Molecular basis for nucleotide conservation at the ends of the dengue virus genome PLoS Pathog 8 2012 e1002912
-
(2012)
PLoS Pathog
, vol.8
, pp. 1002912
-
-
Selisko, B.1
Potisopon, S.2
Agred, R.3
Priet, S.4
Varlet, I.5
Thillier, Y.6
Sallamand, C.7
Debart, F.8
Vasseur, J.-J.9
Canard, B.10
-
10
-
-
0242574743
-
Visualization of membrane protein domains by cryo-electron microscopy of dengue virus
-
W. Zhang, P.R. Chipman, J. Corver, P.R. Johnson, Y. Zhang, S. Mukhopadhyay, T.S. Baker, J.H. Strauss, M.G. Rossmann, and R.J. Kuhn Visualization of membrane protein domains by cryo-electron microscopy of dengue virus Nat Struct Biol 10 2003 907 912
-
(2003)
Nat Struct Biol
, vol.10
, pp. 907-912
-
-
Zhang, W.1
Chipman, P.R.2
Corver, J.3
Johnson, P.R.4
Zhang, Y.5
Mukhopadhyay, S.6
Baker, T.S.7
Strauss, J.H.8
Rossmann, M.G.9
Kuhn, R.J.10
-
11
-
-
79851492362
-
RIG-I, MDA5 and TLR3 synergistically play an important role in restriction of dengue virus infection
-
A.M.A. Nasirudeen, H.H. Wong, P. Thien, S. Xu, K.-P. Lam, and D.X. Liu RIG-I, MDA5 and TLR3 synergistically play an important role in restriction of dengue virus infection PLoS Negl Trop Dis 5 2011 e926
-
(2011)
PLoS Negl Trop Dis
, vol.5
, pp. 926
-
-
Nasirudeen, A.M.A.1
Wong, H.H.2
Thien, P.3
Xu, S.4
Lam, K.-P.5
Liu, D.X.6
-
12
-
-
84867669809
-
A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability
-
S.L. Moon, J.R. Anderson, Y. Kumagai, C.J. Wilusz, S. Akira, A.A. Khromykh, and J. Wilusz A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability RNA 18 2012 2029 2040
-
(2012)
RNA
, vol.18
, pp. 2029-2040
-
-
Moon, S.L.1
Anderson, J.R.2
Kumagai, Y.3
Wilusz, C.J.4
Akira, S.5
Khromykh, A.A.6
Wilusz, J.7
-
13
-
-
84908163314
-
STAT2 signaling and dengue virus infection
-
J. Morrison, and A. García-Sastre STAT2 signaling and dengue virus infection JAK-STAT 3 2014 e27715
-
(2014)
JAK-STAT
, vol.3
, pp. 27715
-
-
Morrison, J.1
García-Sastre, A.2
-
15
-
-
70349432365
-
Dengue virus NS5 inhibits interferon-alpha signaling by blocking signal transducer and activator of transcription 2 phosphorylation
-
M. Mazzon, M. Jones, A. Davidson, B. Chain, and M. Jacobs Dengue virus NS5 inhibits interferon-alpha signaling by blocking signal transducer and activator of transcription 2 phosphorylation J Infect Dis 200 2009 1261 1270
-
(2009)
J Infect Dis
, vol.200
, pp. 1261-1270
-
-
Mazzon, M.1
Jones, M.2
Davidson, A.3
Chain, B.4
Jacobs, M.5
-
16
-
-
0029027850
-
Association between NS3 and NS5 proteins of dengue virus type 2 in the putative RNA replicase is linked to differential phosphorylation of NS5
-
M. Kapoor, L. Zhang, M. Ramachandra, J. Kusukawa, K.E. Ebner, and R. Padmanabhan Association between NS3 and NS5 proteins of dengue virus type 2 in the putative RNA replicase is linked to differential phosphorylation of NS5 J Biol Chem 270 1995 19100 19106
-
(1995)
J Biol Chem
, vol.270
, pp. 19100-19106
-
-
Kapoor, M.1
Zhang, L.2
Ramachandra, M.3
Kusukawa, J.4
Ebner, K.E.5
Padmanabhan, R.6
-
17
-
-
0026511204
-
Monoclonal antibodies identify the NS5 yellow fever virus non-structural protein in the nuclei of infected cells
-
A. Buckley, S. Gaidamovich, A. Turchinskaya, and E.A. Gould Monoclonal antibodies identify the NS5 yellow fever virus non-structural protein in the nuclei of infected cells J Gen Virol 73 Pt 5 1992 1125 1130
-
(1992)
J Gen Virol
, vol.73
, Issue.PART 5
, pp. 1125-1130
-
-
Buckley, A.1
Gaidamovich, S.2
Turchinskaya, A.3
Gould, E.A.4
-
19
-
-
34249845069
-
Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
-
H. Malet, M.-P. Egloff, B. Selisko, R.E. Butcher, P.J. Wright, M. Roberts, A. Gruez, G. Sulzenbacher, C. Vonrhein, and G. Bricogne Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5 J Biol Chem 282 2007 10678 10689
-
(2007)
J Biol Chem
, vol.282
, pp. 10678-10689
-
-
Malet, H.1
Egloff, M.-P.2
Selisko, B.3
Butcher, R.E.4
Wright, P.J.5
Roberts, M.6
Gruez, A.7
Sulzenbacher, G.8
Vonrhein, C.9
Bricogne, G.10
-
20
-
-
84881238516
-
Serotype-specific differences in dengue virus non-structural protein 5 nuclear localization
-
H. Hannemann, P.-Y. Sung, H.-C. Chiu, A. Yousuf, J. Bird, S.P. Lim, and A.D. Davidson Serotype-specific differences in dengue virus non-structural protein 5 nuclear localization J Biol Chem 288 2013 22621 22635
-
(2013)
J Biol Chem
, vol.288
, pp. 22621-22635
-
-
Hannemann, H.1
Sung, P.-Y.2
Chiu, H.-C.3
Yousuf, A.4
Bird, J.5
Lim, S.P.6
Davidson, A.D.7
-
21
-
-
67650106549
-
CRM1-mediated nuclear export of dengue virus RNA polymerase NS5 modulates interleukin-8 induction and virus production
-
S.M. Rawlinson, M.J. Pryor, P.J. Wright, and D.A. Jans CRM1-mediated nuclear export of dengue virus RNA polymerase NS5 modulates interleukin-8 induction and virus production J Biol Chem 284 2009 15589 15597
-
(2009)
J Biol Chem
, vol.284
, pp. 15589-15597
-
-
Rawlinson, S.M.1
Pryor, M.J.2
Wright, P.J.3
Jans, D.A.4
-
22
-
-
84875802186
-
Nuclear localization of dengue virus nonstructural protein 5 does not strictly correlate with efficient viral RNA replication and inhibition of type i interferon signaling
-
A. Kumar, S. Bühler, B. Selisko, A. Davidson, K. Mulder, B. Canard, S. Miller, and R. Bartenschlager Nuclear localization of dengue virus nonstructural protein 5 does not strictly correlate with efficient viral RNA replication and inhibition of type I interferon signaling J Virol 87 2013 4545 4557
-
(2013)
J Virol
, vol.87
, pp. 4545-4557
-
-
Kumar, A.1
Bühler, S.2
Selisko, B.3
Davidson, A.4
Mulder, K.5
Canard, B.6
Miller, S.7
Bartenschlager, R.8
-
23
-
-
84895824915
-
RNA-dependent RNA polymerase of Japanese encephalitis virus binds the initiator nucleotide GTP to form a mechanistically important pre-initiation state
-
P. Surana, V. Satchidanandam, and D.T. Nair RNA-dependent RNA polymerase of Japanese encephalitis virus binds the initiator nucleotide GTP to form a mechanistically important pre-initiation state Nucleic Acids Res 42 2014 2758 2773
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 2758-2773
-
-
Surana, P.1
Satchidanandam, V.2
Nair, D.T.3
-
24
-
-
77954955357
-
Biochemical characterization of the inhibition of the dengue virus RNA polymerase by beta-d-2′-ethynyl-7-deaza-adenosine triphosphate
-
D.R. Latour, A. Jekle, H. Javanbakht, R. Henningsen, P. Gee, I. Lee, P. Tran, S. Ren, A.K. Kutach, and S.F. Harris Biochemical characterization of the inhibition of the dengue virus RNA polymerase by beta-d-2′-ethynyl-7-deaza-adenosine triphosphate Antiviral Res 87 2010 213 222
-
(2010)
Antiviral Res
, vol.87
, pp. 213-222
-
-
Latour, D.R.1
Jekle, A.2
Javanbakht, H.3
Henningsen, R.4
Gee, P.5
Lee, I.6
Tran, P.7
Ren, S.8
Kutach, A.K.9
Harris, S.F.10
-
25
-
-
79958098689
-
The F1 motif of dengue virus polymerase NS5 is involved in promoter-dependent RNA synthesis
-
N.G. Iglesias, C.V. Filomatori, and A.V. Gamarnik The F1 motif of dengue virus polymerase NS5 is involved in promoter-dependent RNA synthesis J Virol 85 2011 5745 5756
-
(2011)
J Virol
, vol.85
, pp. 5745-5756
-
-
Iglesias, N.G.1
Filomatori, C.V.2
Gamarnik, A.V.3
-
26
-
-
84886647090
-
A crystal structure of the dengue virus non-structural protein 5 (NS5) polymerase delineates interdomain amino acid residues that enhance its thermostability and de novo initiation activities
-
S.P. Lim, J.H.K. Koh, C.C. Seh, C.W. Liew, A.D. Davidson, L.S. Chua, R. Chandrasekaran, T.C. Cornvik, P.-Y. Shi, and J. Lescar A crystal structure of the dengue virus non-structural protein 5 (NS5) polymerase delineates interdomain amino acid residues that enhance its thermostability and de novo initiation activities J Biol Chem 288 2013 31105 31114
-
(2013)
J Biol Chem
, vol.288
, pp. 31105-31114
-
-
Lim, S.P.1
Koh, J.H.K.2
Seh, C.C.3
Liew, C.W.4
Davidson, A.D.5
Chua, L.S.6
Chandrasekaran, R.7
Cornvik, T.C.8
Shi, P.-Y.9
Lescar, J.10
-
27
-
-
0035955628
-
De novo synthesis of RNA by the dengue virus RNA-dependent RNA polymerase exhibits temperature dependence at the initiation but not elongation phase
-
M. Ackermann, and R. Padmanabhan De novo synthesis of RNA by the dengue virus RNA-dependent RNA polymerase exhibits temperature dependence at the initiation but not elongation phase J Biol Chem 276 2001 39926 39937
-
(2001)
J Biol Chem
, vol.276
, pp. 39926-39937
-
-
Ackermann, M.1
Padmanabhan, R.2
-
28
-
-
84895822138
-
Polymerases of hepatitis C viruses and flaviviruses: Structural and mechanistic insights and drug development
-
C. Caillet-Saguy, S.P. Lim, P.-Y. Shi, J. Lescar, and S. Bressanelli Polymerases of hepatitis C viruses and flaviviruses: structural and mechanistic insights and drug development Antiviral Res 105 2014 8 16
-
(2014)
Antiviral Res
, vol.105
, pp. 8-16
-
-
Caillet-Saguy, C.1
Lim, S.P.2
Shi, P.-Y.3
Lescar, J.4
Bressanelli, S.5
-
29
-
-
84883381606
-
Crystal structure of the full-length Japanese encephalitis virus NS5 reveals a conserved methyltransferase-polymerase interface
-
G. Lu, and P. Gong Crystal structure of the full-length Japanese encephalitis virus NS5 reveals a conserved methyltransferase-polymerase interface PLoS Pathog 9 2013 e1003549
-
(2013)
PLoS Pathog
, vol.9
, pp. 1003549
-
-
Lu, G.1
Gong, P.2
-
30
-
-
34247610261
-
Crystal structure of the dengue virus RNA-dependent RNA polymerase catalytic domain at 1.85-angstrom resolution
-
T.L. Yap, T. Xu, Y.-L. Chen, H. Malet, M.-P. Egloff, B. Canard, S.G. Vasudevan, and J. Lescar Crystal structure of the dengue virus RNA-dependent RNA polymerase catalytic domain at 1.85-angstrom resolution J Virol 81 2007 4753 4765
-
(2007)
J Virol
, vol.81
, pp. 4753-4765
-
-
Yap, T.L.1
Xu, T.2
Chen, Y.-L.3
Malet, H.4
Egloff, M.-P.5
Canard, B.6
Vasudevan, S.G.7
Lescar, J.8
-
31
-
-
84876340250
-
Conformational flexibility of the dengue virus RNA-dependent RNA polymerase revealed by a complex with an inhibitor
-
C.G. Noble, S.P. Lim, Y.-L. Chen, C.W. Liew, L. Yap, J. Lescar, and P.-Y. Shi Conformational flexibility of the dengue virus RNA-dependent RNA polymerase revealed by a complex with an inhibitor J Virol 87 2013 5291 5295
-
(2013)
J Virol
, vol.87
, pp. 5291-5295
-
-
Noble, C.G.1
Lim, S.P.2
Chen, Y.-L.3
Liew, C.W.4
Yap, L.5
Lescar, J.6
Shi, P.-Y.7
-
32
-
-
84893864367
-
Comparison of dengue virus and HCV: From impact on global health to their RNA-dependent RNA polymerase
-
S. Potisopon, S. Priet, B. Selisko, and B. Canard Comparison of dengue virus and HCV: from impact on global health to their RNA-dependent RNA polymerase Future Virol 9 2014 53 67
-
(2014)
Future Virol
, vol.9
, pp. 53-67
-
-
Potisopon, S.1
Priet, S.2
Selisko, B.3
Canard, B.4
-
33
-
-
84879074185
-
Role of motif B loop in allosteric regulation of RNA-dependent RNA polymerization activity
-
D. Garriga, C. Ferrer-Orta, J. Querol-Audí, B. Oliva, and N. Verdaguer Role of motif B loop in allosteric regulation of RNA-dependent RNA polymerization activity J Mol Biol 425 2013 2279 2287
-
(2013)
J Mol Biol
, vol.425
, pp. 2279-2287
-
-
Garriga, D.1
Ferrer-Orta, C.2
Querol-Audí, J.3
Oliva, B.4
Verdaguer, N.5
-
34
-
-
84865768433
-
Motif D of viral RNA-dependent RNA polymerases determines efficiency and fidelity of nucleotide addition
-
X. Yang, E.D. Smidansky, K.R. Maksimchuk, D. Lum, J.L. Welch, J.J. Arnold, C.E. Cameron, and D.D. Boehr Motif D of viral RNA-dependent RNA polymerases determines efficiency and fidelity of nucleotide addition Structure 20 2012 1519 1527
-
(2012)
Structure
, vol.20
, pp. 1519-1527
-
-
Yang, X.1
Smidansky, E.D.2
Maksimchuk, K.R.3
Lum, D.4
Welch, J.L.5
Arnold, J.J.6
Cameron, C.E.7
Boehr, D.D.8
-
35
-
-
84865734775
-
Conformational changes in motif D of RdRPs as fidelity determinant
-
N. Verdaguer, and C. Ferrer-Orta Conformational changes in motif D of RdRPs as fidelity determinant Structure 20 2012 1448 1450
-
(2012)
Structure
, vol.20
, pp. 1448-1450
-
-
Verdaguer, N.1
Ferrer-Orta, C.2
-
36
-
-
59649110607
-
Nucleic acid polymerases use a general acid for nucleotidyl transfer
-
C. Castro, E.D. Smidansky, J.J. Arnold, K.R. Maksimchuk, I. Moustafa, A. Uchida, M. Götte, W. Konigsberg, and C.E. Cameron Nucleic acid polymerases use a general acid for nucleotidyl transfer Nat Struct Mol Biol 16 2009 212 218
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 212-218
-
-
Castro, C.1
Smidansky, E.D.2
Arnold, J.J.3
Maksimchuk, K.R.4
Moustafa, I.5
Uchida, A.6
Götte, M.7
Konigsberg, W.8
Cameron, C.E.9
-
37
-
-
84873669740
-
Highly similar structural frames link the template tunnel and NTP entry tunnel to the exterior surface in RNA-dependent RNA polymerases
-
D.M. Lang, A.T. Zemla, and C.L.E. Zhou Highly similar structural frames link the template tunnel and NTP entry tunnel to the exterior surface in RNA-dependent RNA polymerases Nucleic Acids Res 41 2013 1464 1482
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 1464-1482
-
-
Lang, D.M.1
Zemla, A.T.2
Zhou, C.L.E.3
-
38
-
-
0036434498
-
The palm subdomain-based active site is internally permuted in viral RNA-dependent RNA polymerases of an ancient lineage
-
A.E. Gorbalenya, F.M. Pringle, J.-L. Zeddam, B.T. Luke, C.E. Cameron, J. Kalmakoff, T.N. Hanzlik, K.H.J. Gordon, and V.K. Ward The palm subdomain-based active site is internally permuted in viral RNA-dependent RNA polymerases of an ancient lineage J Mol Biol 324 2002 47 62
-
(2002)
J Mol Biol
, vol.324
, pp. 47-62
-
-
Gorbalenya, A.E.1
Pringle, F.M.2
Zeddam, J.-L.3
Luke, B.T.4
Cameron, C.E.5
Kalmakoff, J.6
Hanzlik, T.N.7
Gordon, K.H.J.8
Ward, V.K.9
-
39
-
-
84908163313
-
The methytransferase domain of the dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain
-
pii:gku666 [Epub ahead of print]
-
S. Potisopon, S. Priet, A. Collet, E. Decroly, B. Canard, and B. Selisko The methytransferase domain of the dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain Nucleic Acids Res 2014 pii:gku666 [Epub ahead of print]
-
(2014)
Nucleic Acids Res
-
-
Potisopon, S.1
Priet, S.2
Collet, A.3
Decroly, E.4
Canard, B.5
Selisko, B.6
-
40
-
-
84864436647
-
Dengue virus nonstructural protein 5 adopts multiple conformations in solution
-
C. Bussetta, and K.H. Choi Dengue virus nonstructural protein 5 adopts multiple conformations in solution Biochemistry (Mosc.) 51 2012 5921 5931
-
(2012)
Biochemistry (Mosc.)
, vol.51
, pp. 5921-5931
-
-
Bussetta, C.1
Choi, K.H.2
-
41
-
-
84884539994
-
Protein-protein interactions among West Nile non-structural proteins and transmembrane complex formation in mammalian cells
-
L. Yu, K. Takeda, and L. Markoff Protein-protein interactions among West Nile non-structural proteins and transmembrane complex formation in mammalian cells Virology 446 2013 365 377
-
(2013)
Virology
, vol.446
, pp. 365-377
-
-
Yu, L.1
Takeda, K.2
Markoff, L.3
-
42
-
-
84875969405
-
The flavivirus NS1 protein: Molecular and structural biology, immunology, role in pathogenesis and application as a diagnostic biomarker
-
D.A. Muller, and P.R. Young The flavivirus NS1 protein: molecular and structural biology, immunology, role in pathogenesis and application as a diagnostic biomarker Antiviral Res 98 2013 192 208
-
(2013)
Antiviral Res
, vol.98
, pp. 192-208
-
-
Muller, D.A.1
Young, P.R.2
-
43
-
-
84875777404
-
Membrane topology and function of dengue virus NS2A protein
-
X. Xie, S. Gayen, C. Kang, Z. Yuan, and P.-Y. Shi Membrane topology and function of dengue virus NS2A protein J Virol 87 2013 4609 4622
-
(2013)
J Virol
, vol.87
, pp. 4609-4622
-
-
Xie, X.1
Gayen, S.2
Kang, C.3
Yuan, Z.4
Shi, P.-Y.5
-
44
-
-
84864188513
-
NS4A and NS4B proteins from dengue virus: Membranotropic regions
-
H. Nemésio, F. Palomares-Jerez, and J. Villalaín NS4A and NS4B proteins from dengue virus: membranotropic regions Biochim Biophys Acta 1818 2012 2818 2830
-
(2012)
Biochim Biophys Acta
, vol.1818
, pp. 2818-2830
-
-
Nemésio, H.1
Palomares-Jerez, F.2
Villalaín, J.3
-
45
-
-
0034011620
-
Cis- and trans-acting elements in flavivirus RNA replication
-
A.A. Khromykh, P.L. Sedlak, and E.G. Westaway cis- and trans-acting elements in flavivirus RNA replication J Virol 74 2000 3253 3263
-
(2000)
J Virol
, vol.74
, pp. 3253-3263
-
-
Khromykh, A.A.1
Sedlak, P.L.2
Westaway, E.G.3
-
46
-
-
34247848008
-
The non-structural protein 4A of dengue virus is an integral membrane protein inducing membrane alterations in a 2K-regulated manner
-
S. Miller, S. Kastner, J. Krijnse-Locker, S. Bühler, and R. Bartenschlager The non-structural protein 4A of dengue virus is an integral membrane protein inducing membrane alterations in a 2K-regulated manner J Biol Chem 282 2007 8873 8882
-
(2007)
J Biol Chem
, vol.282
, pp. 8873-8882
-
-
Miller, S.1
Kastner, S.2
Krijnse-Locker, J.3
Bühler, S.4
Bartenschlager, R.5
-
47
-
-
70349337005
-
NS4A regulates the ATPase activity of the NS3 helicase: A novel cofactor role of the non-structural protein NS4A from West Nile virus
-
S.A. Shiryaev, A.V. Chernov, A.E. Aleshin, T.N. Shiryaeva, and A.Y. Strongin NS4A regulates the ATPase activity of the NS3 helicase: a novel cofactor role of the non-structural protein NS4A from West Nile virus J Gen Virol 90 2009 2081 2085
-
(2009)
J Gen Virol
, vol.90
, pp. 2081-2085
-
-
Shiryaev, S.A.1
Chernov, A.V.2
Aleshin, A.E.3
Shiryaeva, T.N.4
Strongin, A.Y.5
-
48
-
-
33747338217
-
Dengue virus NS4B interacts with NS3 and dissociates it from single-stranded RNA
-
I. Umareddy, A. Chao, A. Sampath, F. Gu, and S.G. Vasudevan Dengue virus NS4B interacts with NS3 and dissociates it from single-stranded RNA J Gen Virol 87 2006 2605 2614
-
(2006)
J Gen Virol
, vol.87
, pp. 2605-2614
-
-
Umareddy, I.1
Chao, A.2
Sampath, A.3
Gu, F.4
Vasudevan, S.G.5
-
49
-
-
84900338393
-
Functional interplay among the flavivirus NS3 protease, helicase, and cofactors
-
K. Li, W.W. Phoo, and D. Luo Functional interplay among the flavivirus NS3 protease, helicase, and cofactors Virol Sin 29 2014 74 85
-
(2014)
Virol Sin
, vol.29
, pp. 74-85
-
-
Li, K.1
Phoo, W.W.2
Luo, D.3
-
50
-
-
53249121029
-
Towards the design of antiviral inhibitors against flaviviruses: The case for the multifunctional NS3 protein from Dengue virus as a target
-
J. Lescar, D. Luo, T. Xu, A. Sampath, S.P. Lim, B. Canard, and S.G. Vasudevan Towards the design of antiviral inhibitors against flaviviruses: the case for the multifunctional NS3 protein from Dengue virus as a target Antiviral Res 80 2008 94 101
-
(2008)
Antiviral Res
, vol.80
, pp. 94-101
-
-
Lescar, J.1
Luo, D.2
Xu, T.3
Sampath, A.4
Lim, S.P.5
Canard, B.6
Vasudevan, S.G.7
-
51
-
-
0035061425
-
A small region of the dengue virus-encoded RNA-dependent RNA polymerase, NS5, confers interaction with both the nuclear transport receptor importin-beta and the viral helicase, NS3
-
M. Johansson, A.J. Brooks, D.A. Jans, and S.G. Vasudevan A small region of the dengue virus-encoded RNA-dependent RNA polymerase, NS5, confers interaction with both the nuclear transport receptor importin-beta and the viral helicase, NS3 J Gen Virol 82 2001 735 745
-
(2001)
J Gen Virol
, vol.82
, pp. 735-745
-
-
Johansson, M.1
Brooks, A.J.2
Jans, D.A.3
Vasudevan, S.G.4
-
52
-
-
79954588648
-
Functional analysis of two cavities in flavivirus NS5 polymerase
-
G. Zou, Y.-L. Chen, H. Dong, C.C. Lim, L.J. Yap, Y.H. Yau, S.G. Shochat, J. Lescar, and P.-Y. Shi Functional analysis of two cavities in flavivirus NS5 polymerase J Biol Chem 286 2011 14362 14372
-
(2011)
J Biol Chem
, vol.286
, pp. 14362-14372
-
-
Zou, G.1
Chen, Y.-L.2
Dong, H.3
Lim, C.C.4
Yap, L.J.5
Yau, Y.H.6
Shochat, S.G.7
Lescar, J.8
Shi, P.-Y.9
-
53
-
-
84869137921
-
Establishment of a robust dengue virus NS3-NS5 binding assay for identification of protein-protein interaction inhibitors
-
H. Takahashi, C. Takahashi, N.J. Moreland, Y.-T. Chang, T. Sawasaki, A. Ryo, S.G. Vasudevan, Y. Suzuki, and N. Yamamoto Establishment of a robust dengue virus NS3-NS5 binding assay for identification of protein-protein interaction inhibitors Antiviral Res 96 2012 305 314
-
(2012)
Antiviral Res
, vol.96
, pp. 305-314
-
-
Takahashi, H.1
Takahashi, C.2
Moreland, N.J.3
Chang, Y.-T.4
Sawasaki, T.5
Ryo, A.6
Vasudevan, S.G.7
Suzuki, Y.8
Yamamoto, N.9
-
54
-
-
50349097265
-
Mutagenesis of the dengue virus type 2 NS5 methyltransferase domain
-
H. Kroschewski, S.P. Lim, R.E. Butcher, T.L. Yap, J. Lescar, P.J. Wright, S.G. Vasudevan, and A.D. Davidson Mutagenesis of the dengue virus type 2 NS5 methyltransferase domain J Biol Chem 283 2008 19410 19421
-
(2008)
J Biol Chem
, vol.283
, pp. 19410-19421
-
-
Kroschewski, H.1
Lim, S.P.2
Butcher, R.E.3
Yap, T.L.4
Lescar, J.5
Wright, P.J.6
Vasudevan, S.G.7
Davidson, A.D.8
-
55
-
-
0032486596
-
Recombinant dengue virus type 1 NS3 protein exhibits specific viral RNA binding and NTPase activity regulated by the NS5 protein
-
T. Cui, R.J. Sugrue, Q. Xu, A.K. Lee, Y.C. Chan, and J. Fu Recombinant dengue virus type 1 NS3 protein exhibits specific viral RNA binding and NTPase activity regulated by the NS5 protein Virology 246 1998 409 417
-
(1998)
Virology
, vol.246
, pp. 409-417
-
-
Cui, T.1
Sugrue, R.J.2
Xu, Q.3
Lee, A.K.4
Chan, Y.C.5
Fu, J.6
-
56
-
-
22844443626
-
Modulation of the nucleoside triphosphatase/RNA helicase and 5′-RNA triphosphatase activities of Dengue virus type 2 nonstructural protein 3 (NS3) by interaction with NS5, the RNA-dependent RNA polymerase
-
C. Yon, T. Teramoto, N. Mueller, J. Phelan, V.K. Ganesh, K.H.M. Murthy, and R. Padmanabhan Modulation of the nucleoside triphosphatase/RNA helicase and 5′-RNA triphosphatase activities of Dengue virus type 2 nonstructural protein 3 (NS3) by interaction with NS5, the RNA-dependent RNA polymerase J Biol Chem 280 2005 27412 27419
-
(2005)
J Biol Chem
, vol.280
, pp. 27412-27419
-
-
Yon, C.1
Teramoto, T.2
Mueller, N.3
Phelan, J.4
Ganesh, V.K.5
Murthy, K.H.M.6
Padmanabhan, R.7
-
57
-
-
84910613036
-
Quantitative proteomic analysis of host-virus interactions reveals a role for GBF1 in dengue infection
-
L.N. Carpp, R.S. Rogers, R.L. Moritz, and J.D. Aitchison Quantitative proteomic analysis of host-virus interactions reveals a role for GBF1 in dengue infection Mol Cell Proteomics 2014 10.1074/mcp.M114. 038984
-
(2014)
Mol Cell Proteomics
-
-
Carpp, L.N.1
Rogers, R.S.2
Moritz, R.L.3
Aitchison, J.D.4
-
58
-
-
67749119973
-
Cyclosporine inhibits flavivirus replication through blocking the interaction between host cyclophilins and viral NS5 protein
-
M. Qing, F. Yang, B. Zhang, G. Zou, J.M. Robida, Z. Yuan, H. Tang, and P.-Y. Shi Cyclosporine inhibits flavivirus replication through blocking the interaction between host cyclophilins and viral NS5 protein Antimicrob Agents Chemother 53 2009 3226 3235
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 3226-3235
-
-
Qing, M.1
Yang, F.2
Zhang, B.3
Zou, G.4
Robida, J.M.5
Yuan, Z.6
Tang, H.7
Shi, P.-Y.8
-
59
-
-
69449096968
-
Protein kinase G phosphorylates mosquito-borne flavivirus NS5
-
D. Bhattacharya, Mayuri, S.M. Best, R. Perera, R.J. Kuhn, and R. Striker Protein kinase G phosphorylates mosquito-borne flavivirus NS5 J Virol 83 2009 9195 9205
-
(2009)
J Virol
, vol.83
, pp. 9195-9205
-
-
Bhattacharya, D.1
Mayuri2
Best, S.M.3
Perera, R.4
Kuhn, R.J.5
Striker, R.6
-
60
-
-
84880334561
-
West Nile virus methyltransferase domain interacts with protein kinase G
-
J.A. Keating, D. Bhattacharya, P.-Y. Lim, S. Falk, B. Weisblum, K.A. Bernard, M. Sharma, R.J. Kuhn, and R. Striker West Nile virus methyltransferase domain interacts with protein kinase G Virol J 10 2013 242
-
(2013)
Virol J
, vol.10
, pp. 242
-
-
Keating, J.A.1
Bhattacharya, D.2
Lim, P.-Y.3
Falk, S.4
Weisblum, B.5
Bernard, K.A.6
Sharma, M.7
Kuhn, R.J.8
Striker, R.9
-
61
-
-
84884521148
-
Heat shock protein 70 is associated with replicase complex of Japanese encephalitis virus and positively regulates viral genome replication
-
J. Ye, Z. Chen, B. Zhang, H. Miao, A. Zohaib, Q. Xu, H. Chen, and S. Cao Heat shock protein 70 is associated with replicase complex of Japanese encephalitis virus and positively regulates viral genome replication PLOS ONE 8 2013 e75188
-
(2013)
PLOS ONE
, vol.8
, pp. 75188
-
-
Ye, J.1
Chen, Z.2
Zhang, B.3
Miao, H.4
Zohaib, A.5
Xu, Q.6
Chen, H.7
Cao, S.8
-
62
-
-
77958100661
-
Dengue virus nonstructural protein 3 redistributes fatty acid synthase to sites of viral replication and increases cellular fatty acid synthesis
-
N.S. Heaton, R. Perera, K.L. Berger, S. Khadka, D.J. Lacount, R.J. Kuhn, and G. Randall Dengue virus nonstructural protein 3 redistributes fatty acid synthase to sites of viral replication and increases cellular fatty acid synthesis Proc Natl Acad Sci U S A 107 2010 17345 17350
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 17345-17350
-
-
Heaton, N.S.1
Perera, R.2
Berger, K.L.3
Khadka, S.4
Lacount, D.J.5
Kuhn, R.J.6
Randall, G.7
-
63
-
-
84898655895
-
Caveolin-1 in lipid rafts interacts with dengue virus NS3 during polyprotein processing and replication in HMEC-1 cells
-
J. García Cordero, M. León Juárez, J.A. González-Y-Merchand, L. Cedillo Barrón, and B. Gutiérrez Castañeda Caveolin-1 in lipid rafts interacts with dengue virus NS3 during polyprotein processing and replication in HMEC-1 cells PLOS ONE 9 2014 e90704
-
(2014)
PLOS ONE
, vol.9
, pp. 90704
-
-
García Cordero, J.1
León Juárez, M.2
González-Y-Merchand, J.A.3
Cedillo Barrón, L.4
Gutiérrez Castañeda, B.5
-
64
-
-
0030761459
-
Translation elongation factor-1 alpha interacts with the 3′ stem-loop region of West Nile virus genomic RNA
-
J.L. Blackwell, and M.A. Brinton Translation elongation factor-1 alpha interacts with the 3′ stem-loop region of West Nile virus genomic RNA J Virol 71 1997 6433 6444
-
(1997)
J Virol
, vol.71
, pp. 6433-6444
-
-
Blackwell, J.L.1
Brinton, M.A.2
-
65
-
-
35348822495
-
Interaction between the cellular protein eEF1A and the 3′-terminal stem-loop of West Nile virus genomic RNA facilitates viral minus-strand RNA synthesis
-
W.G. Davis, J.L. Blackwell, P.-Y. Shi, and M.A. Brinton Interaction between the cellular protein eEF1A and the 3′-terminal stem-loop of West Nile virus genomic RNA facilitates viral minus-strand RNA synthesis J Virol 81 2007 10172 10187
-
(2007)
J Virol
, vol.81
, pp. 10172-10187
-
-
Davis, W.G.1
Blackwell, J.L.2
Shi, P.-Y.3
Brinton, M.A.4
-
66
-
-
70849127442
-
Polypyrimidine tract-binding protein is relocated to the cytoplasm and is required during dengue virus infection in Vero cells
-
R.A. Agis-Juárez, I. Galván, F. Medina, T. Daikoku, R. Padmanabhan, J.E. Ludert, and R.M. del Angel Polypyrimidine tract-binding protein is relocated to the cytoplasm and is required during dengue virus infection in Vero cells J Gen Virol 90 2009 2893 2901
-
(2009)
J Gen Virol
, vol.90
, pp. 2893-2901
-
-
Agis-Juárez, R.A.1
Galván, I.2
Medina, F.3
Daikoku, T.4
Padmanabhan, R.5
Ludert, J.E.6
Del Angel, R.M.7
-
67
-
-
0036061536
-
Translation elongation factor-1alpha. La, and PTB interact with the 3′ untranslated region of dengue 4 virus RNA
-
M. De Nova-Ocampo, N. Villegas-Sepúlveda, and R.M. del Angel Translation elongation factor-1alpha. La, and PTB interact with the 3′ untranslated region of dengue 4 virus RNA Virology 295 2002 337 347
-
(2002)
Virology
, vol.295
, pp. 337-347
-
-
De Nova-Ocampo, M.1
Villegas-Sepúlveda, N.2
Del Angel, R.M.3
-
68
-
-
67349133117
-
Polypyrimidine tract-binding protein influences negative strand RNA synthesis of dengue virus
-
L. Jiang, H. Yao, X. Duan, X. Lu, and Y. Liu Polypyrimidine tract-binding protein influences negative strand RNA synthesis of dengue virus Biochem Biophys Res Commun 385 2009 187 192
-
(2009)
Biochem Biophys Res Commun
, vol.385
, pp. 187-192
-
-
Jiang, L.1
Yao, H.2
Duan, X.3
Lu, X.4
Liu, Y.5
-
69
-
-
79952223157
-
NF90 binds the dengue virus RNA 3′ terminus and is a positive regulator of dengue virus replication
-
R.C. Gomila, G.W. Martin, and L. Gehrke NF90 binds the dengue virus RNA 3′ terminus and is a positive regulator of dengue virus replication PLoS ONE 6 2011 e16687
-
(2011)
PLoS ONE
, vol.6
, pp. 16687
-
-
Gomila, R.C.1
Martin, G.W.2
Gehrke, L.3
-
70
-
-
81255210913
-
Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3′ UTR structures
-
A.M. Ward, K. Bidet, A. Yinglin, S.G. Ler, K. Hogue, W. Blackstock, J. Gunaratne, and M.A. Garcia-Blanco Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3′ UTR structures RNA Biol 8 2011 1173 1186
-
(2011)
RNA Biol
, vol.8
, pp. 1173-1186
-
-
Ward, A.M.1
Bidet, K.2
Yinglin, A.3
Ler, S.G.4
Hogue, K.5
Blackstock, W.6
Gunaratne, J.7
Garcia-Blanco, M.A.8
-
71
-
-
79955780170
-
Functional interaction between cellular p100 and the dengue virus 3′ UTR
-
Y. Lei, Y. Huang, H. Zhang, L. Yu, M. Zhang, and A. Dayton Functional interaction between cellular p100 and the dengue virus 3′ UTR J Gen Virol 92 2011 796 806
-
(2011)
J Gen Virol
, vol.92
, pp. 796-806
-
-
Lei, Y.1
Huang, Y.2
Zhang, H.3
Yu, L.4
Zhang, M.5
Dayton, A.6
-
72
-
-
35648946315
-
Y box-binding protein-1 binds to the dengue virus 3′-untranslated region and mediates antiviral effects
-
S.M. Paranjape, and E. Harris Y box-binding protein-1 binds to the dengue virus 3′-untranslated region and mediates antiviral effects J Biol Chem 282 2007 30497 30508
-
(2007)
J Biol Chem
, vol.282
, pp. 30497-30508
-
-
Paranjape, S.M.1
Harris, E.2
-
73
-
-
63449118113
-
Poly(A)-binding protein binds to the non-polyadenylated 3′ untranslated region of dengue virus and modulates translation efficiency
-
C. Polacek, P. Friebe, and E. Harris Poly(A)-binding protein binds to the non-polyadenylated 3′ untranslated region of dengue virus and modulates translation efficiency J Gen Virol 90 2009 687 692
-
(2009)
J Gen Virol
, vol.90
, pp. 687-692
-
-
Polacek, C.1
Friebe, P.2
Harris, E.3
-
74
-
-
74049150019
-
Control of dengue virus translation and replication
-
S.M. Paranjape, and E. Harris Control of dengue virus translation and replication Curr Top Microbiol Immunol 338 2010 15 34
-
(2010)
Curr Top Microbiol Immunol
, vol.338
, pp. 15-34
-
-
Paranjape, S.M.1
Harris, E.2
-
75
-
-
33747344212
-
A 5′ RNA element promotes dengue virus RNA synthesis on a circular genome
-
C.V. Filomatori, M.F. Lodeiro, D.E. Alvarez, M.M. Samsa, L. Pietrasanta, and A.V. Gamarnik A 5′ RNA element promotes dengue virus RNA synthesis on a circular genome Genes Dev 20 2006 2238 2249
-
(2006)
Genes Dev
, vol.20
, pp. 2238-2249
-
-
Filomatori, C.V.1
Lodeiro, M.F.2
Alvarez, D.E.3
Samsa, M.M.4
Pietrasanta, L.5
Gamarnik, A.V.6
-
76
-
-
79953200163
-
RNA sequences and structures required for the recruitment and activity of the dengue virus polymerase
-
C.V. Filomatori, N.G. Iglesias, S.M. Villordo, D.E. Alvarez, and A.V. Gamarnik RNA sequences and structures required for the recruitment and activity of the dengue virus polymerase J Biol Chem 286 2011 6929 6939
-
(2011)
J Biol Chem
, vol.286
, pp. 6929-6939
-
-
Filomatori, C.V.1
Iglesias, N.G.2
Villordo, S.M.3
Alvarez, D.E.4
Gamarnik, A.V.5
-
77
-
-
18744362727
-
Long-range RNA-RNA interactions circularize the dengue virus genome
-
D.E. Alvarez, M.F. Lodeiro, S.J. Ludueña, L.I. Pietrasanta, and A.V. Gamarnik Long-range RNA-RNA interactions circularize the dengue virus genome J Virol 79 2005 6631 6643
-
(2005)
J Virol
, vol.79
, pp. 6631-6643
-
-
Alvarez, D.E.1
Lodeiro, M.F.2
Ludueña, S.J.3
Pietrasanta, L.I.4
Gamarnik, A.V.5
-
78
-
-
0035264618
-
Genetic variation in the 3′ non-coding region of dengue viruses
-
A.C. Shurtleff, D.W. Beasley, J.J. Chen, H. Ni, M.T. Suderman, H. Wang, R. Xu, E. Wang, S.C. Weaver, and D.M. Watts Genetic variation in the 3′ non-coding region of dengue viruses Virology 281 2001 75 87
-
(2001)
Virology
, vol.281
, pp. 75-87
-
-
Shurtleff, A.C.1
Beasley, D.W.2
Chen, J.J.3
Ni, H.4
Suderman, M.T.5
Wang, H.6
Xu, R.7
Wang, E.8
Weaver, S.C.9
Watts, D.M.10
-
79
-
-
42749084987
-
Functional analysis of dengue virus cyclization sequences located at the 5′ and 3′UTRs
-
D.E. Alvarez, C.V. Filomatori, and A.V. Gamarnik Functional analysis of dengue virus cyclization sequences located at the 5′ and 3′UTRs Virology 375 2008 223 235
-
(2008)
Virology
, vol.375
, pp. 223-235
-
-
Alvarez, D.E.1
Filomatori, C.V.2
Gamarnik, A.V.3
-
80
-
-
58149526753
-
Conformational changes in the solution structure of the dengue virus 5′ end in the presence and absence of the 3′ untranslated region
-
C. Polacek, J.E. Foley, and E. Harris Conformational changes in the solution structure of the dengue virus 5′ end in the presence and absence of the 3′ untranslated region J Virol 83 2009 1161 1166
-
(2009)
J Virol
, vol.83
, pp. 1161-1166
-
-
Polacek, C.1
Foley, J.E.2
Harris, E.3
-
81
-
-
78951475155
-
The 5′ and 3′ downstream AUG region elements are required for mosquito-borne flavivirus RNA replication
-
P. Friebe, P.-Y. Shi, and E. Harris The 5′ and 3′ downstream AUG region elements are required for mosquito-borne flavivirus RNA replication J Virol 85 2011 1900 1905
-
(2011)
J Virol
, vol.85
, pp. 1900-1905
-
-
Friebe, P.1
Shi, P.-Y.2
Harris, E.3
-
82
-
-
77952736780
-
Interplay of RNA elements in the dengue virus 5′ and 3′ ends required for viral RNA replication
-
P. Friebe, and E. Harris Interplay of RNA elements in the dengue virus 5′ and 3′ ends required for viral RNA replication J Virol 84 2010 6103 6118
-
(2010)
J Virol
, vol.84
, pp. 6103-6118
-
-
Friebe, P.1
Harris, E.2
-
83
-
-
84855203268
-
Composition of the sequence downstream of the dengue virus 5′ cyclization sequence (dCS) affects viral RNA replication
-
P. Friebe, J. Peña, M.O.F. Pohl, and E. Harris Composition of the sequence downstream of the dengue virus 5′ cyclization sequence (dCS) affects viral RNA replication Virology 422 2012 346 356
-
(2012)
Virology
, vol.422
, pp. 346-356
-
-
Friebe, P.1
Peña, J.2
Pohl, M.O.F.3
Harris, E.4
-
84
-
-
50349101877
-
The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis
-
K. Clyde, J. Barrera, and E. Harris The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis Virology 379 2008 314 323
-
(2008)
Virology
, vol.379
, pp. 314-323
-
-
Clyde, K.1
Barrera, J.2
Harris, E.3
-
85
-
-
33144458778
-
RNA secondary structure in the coding region of dengue virus type 2 directs translation start codon selection and is required for viral replication
-
K. Clyde, and E. Harris RNA secondary structure in the coding region of dengue virus type 2 directs translation start codon selection and is required for viral replication J Virol 80 2006 2170 2182
-
(2006)
J Virol
, vol.80
, pp. 2170-2182
-
-
Clyde, K.1
Harris, E.2
-
86
-
-
84865305540
-
A novel coding-region RNA element modulates infectious dengue virus particle production in both mammalian and mosquito cells and regulates viral replication in Aedes aegypti mosquitoes
-
A.M. Groat-Carmona, S. Orozco, P. Friebe, A. Payne, L. Kramer, and E. Harris A novel coding-region RNA element modulates infectious dengue virus particle production in both mammalian and mosquito cells and regulates viral replication in Aedes aegypti mosquitoes Virology 432 2012 511 526
-
(2012)
Virology
, vol.432
, pp. 511-526
-
-
Groat-Carmona, A.M.1
Orozco, S.2
Friebe, P.3
Payne, A.4
Kramer, L.5
Harris, E.6
-
87
-
-
80053317134
-
Functional RNA elements in the dengue virus genome
-
L.G. Gebhard, C.V. Filomatori, and A.V. Gamarnik Functional RNA elements in the dengue virus genome Viruses 3 2011 1739 1756
-
(2011)
Viruses
, vol.3
, pp. 1739-1756
-
-
Gebhard, L.G.1
Filomatori, C.V.2
Gamarnik, A.V.3
-
88
-
-
34547570863
-
Characterization of the variable region in the 3′ non-translated region of dengue type 1 virus
-
S. Tajima, Y. Nukui, T. Takasaki, and I. Kurane Characterization of the variable region in the 3′ non-translated region of dengue type 1 virus J Gen Virol 88 2007 2214 2222
-
(2007)
J Gen Virol
, vol.88
, pp. 2214-2222
-
-
Tajima, S.1
Nukui, Y.2
Takasaki, T.3
Kurane, I.4
-
89
-
-
57049096375
-
A highly structured, nuclease-resistant, noncoding RNA produced by flaviviruses is required for pathogenicity
-
G.P. Pijlman, A. Funk, N. Kondratieva, J. Leung, S. Torres, L. van der Aa, W.J. Liu, A.C. Palmenberg, P.-Y. Shi, and R.A. Hall A highly structured, nuclease-resistant, noncoding RNA produced by flaviviruses is required for pathogenicity Cell Host Microbe 4 2008 579 591
-
(2008)
Cell Host Microbe
, vol.4
, pp. 579-591
-
-
Pijlman, G.P.1
Funk, A.2
Kondratieva, N.3
Leung, J.4
Torres, S.5
Van Der Aa, L.6
Liu, W.J.7
Palmenberg, A.C.8
Shi, P.-Y.9
Hall, R.A.10
-
90
-
-
84870716729
-
Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells
-
E. Schnettler, M.G. Sterken, J.Y. Leung, S.W. Metz, C. Geertsema, R.W. Goldbach, J.M. Vlak, A. Kohl, A.A. Khromykh, and G.P. Pijlman Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells J Virol 86 2012 13486 13500
-
(2012)
J Virol
, vol.86
, pp. 13486-13500
-
-
Schnettler, E.1
Sterken, M.G.2
Leung, J.Y.3
Metz, S.W.4
Geertsema, C.5
Goldbach, R.W.6
Vlak, J.M.7
Kohl, A.8
Khromykh, A.A.9
Pijlman, G.P.10
-
91
-
-
84861312740
-
West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type i interferon-mediated antiviral response
-
A. Schuessler, A. Funk, H.M. Lazear, D.A. Cooper, S. Torres, S. Daffis, B.K. Jha, Y. Kumagai, O. Takeuchi, and P. Hertzog West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response J Virol 86 2012 5708 5718
-
(2012)
J Virol
, vol.86
, pp. 5708-5718
-
-
Schuessler, A.1
Funk, A.2
Lazear, H.M.3
Cooper, D.A.4
Torres, S.5
Daffis, S.6
Jha, B.K.7
Kumagai, Y.8
Takeuchi, O.9
Hertzog, P.10
-
92
-
-
23844507858
-
Role of RNA structures present at the 3′UTR of dengue virus on translation, RNA synthesis, and viral replication
-
D.E. Alvarez, A.L. De Lella Ezcurra, S. Fucito, and A.V. Gamarnik Role of RNA structures present at the 3′UTR of dengue virus on translation, RNA synthesis, and viral replication Virology 339 2005 200 212
-
(2005)
Virology
, vol.339
, pp. 200-212
-
-
Alvarez, D.E.1
De Lella Ezcurra, A.L.2
Fucito, S.3
Gamarnik, A.V.4
-
93
-
-
79959343157
-
Identification of cis-acting elements in the 3′-untranslated region of the dengue virus type 2 RNA that modulate translation and replication
-
M. Manzano, E.D. Reichert, S. Polo, B. Falgout, W. Kasprzak, B.A. Shapiro, and R. Padmanabhan Identification of cis-acting elements in the 3′-untranslated region of the dengue virus type 2 RNA that modulate translation and replication J Biol Chem 286 2011 22521 22534
-
(2011)
J Biol Chem
, vol.286
, pp. 22521-22534
-
-
Manzano, M.1
Reichert, E.D.2
Polo, S.3
Falgout, B.4
Kasprzak, W.5
Shapiro, B.A.6
Padmanabhan, R.7
-
94
-
-
84877267759
-
Structural complexity of Dengue virus untranslated regions: Cis-acting RNA motifs and pseudoknot interactions modulating functionality of the viral genome
-
J. Sztuba-Solinska, T. Teramoto, J.W. Rausch, B.A. Shapiro, R. Padmanabhan, and S.F.J. Le Grice Structural complexity of Dengue virus untranslated regions: cis-acting RNA motifs and pseudoknot interactions modulating functionality of the viral genome Nucleic Acids Res 41 2013 5075 5089
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 5075-5089
-
-
Sztuba-Solinska, J.1
Teramoto, T.2
Rausch, J.W.3
Shapiro, B.A.4
Padmanabhan, R.5
Le Grice, S.F.J.6
-
95
-
-
1542781698
-
5′- and 3′-noncoding regions in flavivirus RNA
-
L. Markoff 5′- and 3′-noncoding regions in flavivirus RNA Adv Virus Res 59 2003 177 228
-
(2003)
Adv Virus Res
, vol.59
, pp. 177-228
-
-
Markoff, L.1
-
96
-
-
0031849664
-
Identification of specific nucleotide sequences within the conserved 3′-SL in the dengue type 2 virus genome required for replication
-
L. Zeng, B. Falgout, and L. Markoff Identification of specific nucleotide sequences within the conserved 3′-SL in the dengue type 2 virus genome required for replication J Virol 72 1998 7510 7522
-
(1998)
J Virol
, vol.72
, pp. 7510-7522
-
-
Zeng, L.1
Falgout, B.2
Markoff, L.3
-
97
-
-
30044452235
-
Inhibition of dengue virus translation and RNA synthesis by a morpholino oligomer targeted to the top of the terminal 3′ stem-loop structure
-
K.L. Holden, D.A. Stein, T.C. Pierson, A.A. Ahmed, K. Clyde, P.L. Iversen, and E. Harris Inhibition of dengue virus translation and RNA synthesis by a morpholino oligomer targeted to the top of the terminal 3′ stem-loop structure Virology 344 2006 439 452
-
(2006)
Virology
, vol.344
, pp. 439-452
-
-
Holden, K.L.1
Stein, D.A.2
Pierson, T.C.3
Ahmed, A.A.4
Clyde, K.5
Iversen, P.L.6
Harris, E.7
-
98
-
-
11344282039
-
The flavivirus-conserved penta-nucleotide in the 3′ stem-loop of the West Nile virus genome requires a specific sequence and structure for RNA synthesis, but not for viral translation
-
M. Tilgner, T.S. Deas, and P.-Y. Shi The flavivirus-conserved penta-nucleotide in the 3′ stem-loop of the West Nile virus genome requires a specific sequence and structure for RNA synthesis, but not for viral translation Virology 331 2005 375 386
-
(2005)
Virology
, vol.331
, pp. 375-386
-
-
Tilgner, M.1
Deas, T.S.2
Shi, P.-Y.3
-
99
-
-
84881225571
-
Differential RNA sequence requirement for dengue virus replication in mosquito and mammalian cells
-
S.M. Villordo, and A.V. Gamarnik Differential RNA sequence requirement for dengue virus replication in mosquito and mammalian cells J Virol 87 2013 9365 9372
-
(2013)
J Virol
, vol.87
, pp. 9365-9372
-
-
Villordo, S.M.1
Gamarnik, A.V.2
-
100
-
-
78649681550
-
A balance between circular and linear forms of the dengue virus genome is crucial for viral replication
-
S.M. Villordo, D.E. Alvarez, and A.V. Gamarnik A balance between circular and linear forms of the dengue virus genome is crucial for viral replication RNA 16 2010 2325 2335
-
(2010)
RNA
, vol.16
, pp. 2325-2335
-
-
Villordo, S.M.1
Alvarez, D.E.2
Gamarnik, A.V.3
-
101
-
-
84895919460
-
Distinct conformations of a putative translocation element in poliovirus polymerase
-
A. Sholders, and O. Peersen Distinct conformations of a putative translocation element in poliovirus polymerase J Mol Biol 426 2014 1407 1419
-
(2014)
J Mol Biol
, vol.426
, pp. 1407-1419
-
-
Sholders, A.1
Peersen, O.2
|