메뉴 건너뛰기




Volumn 46, Issue 11, 2014, Pages 398-410

Characterization of biological pathways associated with a 1.37 Mbp genomic region protective of hypertension in Dahl S rats

Author keywords

Bayesian analysis; Chromosome 13; Dahl S rats; Pathway analysis; Salt sensitive hypertension

Indexed keywords

GENOMIC DNA; POTASSIUM; SODIUM ION; TRANSCRIPTOME; UBIQUITIN PROTEIN LIGASE COP1; SALT INTAKE; SODIUM;

EID: 84901718506     PISSN: 10948341     EISSN: 15312267     Source Type: Journal    
DOI: 10.1152/physiolgenomics.00179.2013     Document Type: Article
Times cited : (18)

References (79)
  • 2
    • 0036772780 scopus 로고    scopus 로고
    • Vasoactive intestinal polypeptide/pituitary adenylate cyclase-activating peptide receptor 2 deficiency in mice results in growth retardation and increased basal metabolic rate
    • Asnicar MA, Koster A, Heiman ML, Tinsley F, Smith DP, Galbreath E, Fox N, Ma YL, Blum WF, Hsiung HM. Vasoactive intestinal polypeptide/pituitary adenylate cyclase-activating peptide receptor 2 deficiency in mice results in growth retardation and increased basal metabolic rate. Endocrinology 143: 3994-4006, 2002.
    • (2002) Endocrinology , vol.143 , pp. 3994-4006
    • Asnicar, M.A.1    Koster, A.2    Heiman, M.L.3    Tinsley, F.4    Smith, D.P.5    Galbreath, E.6    Fox, N.7    Ma, Y.L.8    Blum, W.F.9    Hsiung, H.M.10
  • 4
    • 1642501689 scopus 로고    scopus 로고
    • Urinary potassium excretion and sodium sensitivity in blacks
    • Aviv A, Hollenberg NK, Weder A. Urinary potassium excretion and sodium sensitivity in blacks. Hypertension 43: 707-713, 2004.
    • (2004) Hypertension , vol.43 , pp. 707-713
    • Aviv, A.1    Hollenberg, N.K.2    Weder, A.3
  • 5
    • 84884958331 scopus 로고    scopus 로고
    • Molecular bases of circadian rhythmicity in renal physiology and pathology
    • Bonny O, Vinciguerra M, Gumz ML, Mazzoccoli G. Molecular bases of circadian rhythmicity in renal physiology and pathology. Nephrol Dial Transplant 28: 2421-2431, 2013.
    • (2013) Nephrol Dial Transplant , vol.28 , pp. 2421-2431
    • Bonny, O.1    Vinciguerra, M.2    Gumz, M.L.3    Mazzoccoli, G.4
  • 6
    • 0028265328 scopus 로고
    • Salt-sensitivity in hypertension
    • Campese VM. Salt-sensitivity in hypertension. Hypertension 23: 531-550, 1994.
    • (1994) Hypertension , vol.23 , pp. 531-550
    • Campese, V.M.1
  • 7
    • 84866266717 scopus 로고    scopus 로고
    • Mapping single molecule sequencing reads using Basic Local Alignment with Successive Refinement (BLASR): Theory and application
    • Chaisson MJ, Tesler G. Mapping single molecule sequencing reads using Basic Local Alignment with Successive Refinement (BLASR): theory and application. BMC Bioinformatics 13: 238, 2012.
    • (2012) BMC Bioinformatics , vol.13 , pp. 238
    • Chaisson, M.J.1    Tesler, G.2
  • 8
    • 33746468648 scopus 로고    scopus 로고
    • PAPPA2, an enzyme that cleaves an insulin-like growth-factor-binding protein, is a candidate gene for a quantitative trait locus affecting body size in mice
    • Christians JK, Hoeflich A, Keightley PD. PAPPA2, an enzyme that cleaves an insulin-like growth-factor-binding protein, is a candidate gene for a quantitative trait locus affecting body size in mice. Genetics 173: 1547-1553, 2006.
    • (2006) Genetics , vol.173 , pp. 1547-1553
    • Christians, J.K.1    Hoeflich, A.2    Keightley, P.D.3
  • 9
    • 55949136578 scopus 로고    scopus 로고
    • Renal medullary oxidative stress, pressure-natriuresis, and hypertension
    • Cowley AW Jr. Renal medullary oxidative stress, pressure-natriuresis, and hypertension. Hypertension 52: 777-786, 2008.
    • (2008) Hypertension , vol.52 , pp. 777-786
    • Cowley Jr., A.W.1
  • 10
    • 33750202275 scopus 로고    scopus 로고
    • The genetic dissection of essential hypertension
    • Cowley AW Jr. The genetic dissection of essential hypertension. Nat Rev Genet 7: 829-840, 2006.
    • (2006) Nat Rev Genet , vol.7 , pp. 829-840
    • Cowley Jr., A.W.1
  • 11
    • 84879152162 scopus 로고    scopus 로고
    • The extracellular matrix glycoprotein tenascin-R affects adult but not developmental neurogenesis in the olfactory bulb
    • David LS, Schachner M, Saghatelyan A. The extracellular matrix glycoprotein tenascin-R affects adult but not developmental neurogenesis in the olfactory bulb. J Neurosci 33: 10324-10339, 2013.
    • (2013) J Neurosci , vol.33 , pp. 10324-10339
    • David, L.S.1    Schachner, M.2    Saghatelyan, A.3
  • 13
    • 79954495250 scopus 로고    scopus 로고
    • Infiltrating T lymphocytes in the kidney increase oxidative stress and participate in the development of hypertension and renal disease
    • De Miguel C, Guo C, Lund H, Mattson DL. Infiltrating T lymphocytes in the kidney increase oxidative stress and participate in the development of hypertension and renal disease. Am J Physiol Renal Physiol 300: F734-F742, 2011.
    • (2011) Am J Physiol Renal Physiol , vol.300
    • De Miguel, C.1    Guo, C.2    Lund, H.3    Mattson, D.L.4
  • 14
    • 58149136321 scopus 로고    scopus 로고
    • Distinct genomic replacements from Lewis correct diastolic dysfunction, attenuate hypertension, and reduce left ventricular hypertrophy in Dahl salt-sensitive rats
    • Deng AY, Nattel S, Shi Y, L'heureux N, Cardin S, Menard A, Roy J, Tardif JC. Distinct genomic replacements from Lewis correct diastolic dysfunction, attenuate hypertension, and reduce left ventricular hypertrophy in Dahl salt-sensitive rats. J Hypertens 26: 1935-1943, 2008.
    • (2008) J Hypertens , vol.26 , pp. 1935-1943
    • Deng, A.Y.1    Nattel, S.2    Shi, Y.3    L'heureux, N.4    Cardin, S.5    Menard, A.6    Roy, J.7    Tardif, J.C.8
  • 16
    • 0023949611 scopus 로고
    • Astrotactin: A novel neuronal cell surface antigen that mediates neuron-astroglial interactions in cerebellar microsultures
    • Edmondson JC, Liem RK, Juster JE, Hatten ME. Astrotactin: a novel neuronal cell surface antigen that mediates neuron-astroglial interactions in cerebellar microsultures. J Cell Biol 106: 505-517, 1988.
    • (1988) J Cell Biol , vol.106 , pp. 505-517
    • Edmondson, J.C.1    Liem, R.K.2    Juster, J.E.3    Hatten, M.E.4
  • 19
    • 84863012892 scopus 로고    scopus 로고
    • Increased expression of NADPH oxidase subunit p67phox in the renal medulla contributes to excess oxidative stress and salt-sensitive hypertension
    • Feng D, Yang C, Geurts A, Kurth T, Liang M, Lazar J, Mattson DL, O'Connor PM, Cowley AW Jr. Increased expression of NADPH oxidase subunit p67phox in the renal medulla contributes to excess oxidative stress and salt-sensitive hypertension. Cell Metab 15: 1-8, 2012.
    • (2012) Cell Metab , vol.15 , pp. 1-8
    • Feng, D.1    Yang, C.2    Geurts, A.3    Kurth, T.4    Liang, M.5    Lazar, J.6    Mattson, D.L.7    O'Connor, P.M.8    Cowley Jr., A.W.9
  • 20
    • 0025990092 scopus 로고
    • Astrotactin provides a receptor system for CNS neuronal migration
    • Fishell G, Hatten ME. Astrotactin provides a receptor system for CNS neuronal migration. Development 113: 755-765, 1991.
    • (1991) Development , vol.113 , pp. 755-765
    • Fishell, G.1    Hatten, M.E.2
  • 21
    • 14644437750 scopus 로고    scopus 로고
    • Locating a blood pressure quantitative trait locus within 117 kp on the rat genome: Substitution mapping and renal expression analysis
    • Garrett MR, Meng H, Rapp JP, Joe B. Locating a blood pressure quantitative trait locus within 117 kp on the rat genome: substitution mapping and renal expression analysis. Hypertension 45: 451-459, 2005.
    • (2005) Hypertension , vol.45 , pp. 451-459
    • Garrett, M.R.1    Meng, H.2    Rapp, J.P.3    Joe, B.4
  • 23
    • 0043182782 scopus 로고
    • Salt, slavery, survival. Physiological principles underlying the evolutionary hypotheses of salt-sensitive hypertension in Western hemisphere Blacks
    • In: edited by Fray JCS, Coyles JVG. New York: Oxford University Press
    • Grim CE, Wilson TW. Salt, slavery, survival. Physiological principles underlying the evolutionary hypotheses of salt-sensitive hypertension in Western hemisphere Blacks. In: Pathophysiology of Hypertension in Blacks, edited by Fray JCS, Coyles JVG. New York: Oxford University Press, 1993, p. 25-49.
    • (1993) Pathophysiology of Hypertension in Blacks , pp. 25-49
    • Grim, C.E.1    Wilson, T.W.2
  • 26
    • 84860604167 scopus 로고    scopus 로고
    • ASTN1 and alcohol dependence: Family-based association analysis in multiplex alcohol dependence families
    • Hill SY, Weeks DE, Jones BL, Zezza N, Stiffler S. ASTN1 and alcohol dependence: family-based association analysis in multiplex alcohol dependence families. Am J Med Genet B Neuropsychiatr Genet 159B: 445-455, 2012.
    • (2012) Am J Med Genet B Neuropsychiatr Genet , vol.159 B , pp. 445-455
    • Hill, S.Y.1    Weeks, D.E.2    Jones, B.L.3    Zezza, N.4    Stiffler, S.5
  • 28
    • 1542270222 scopus 로고    scopus 로고
    • Substitution mapping of a blood pressure quantitative trait locus to a 2.73 Mb region on rat chromosome 1
    • Joe B, Garrett MR, Dene H, Rapp JP. Substitution mapping of a blood pressure quantitative trait locus to a 2.73 Mb region on rat chromosome 1. J Hypertens 21: 2077-2084, 2003.
    • (2003) J Hypertens , vol.21 , pp. 2077-2084
    • Joe, B.1    Garrett, M.R.2    Dene, H.3    Rapp, J.P.4
  • 31
  • 32
    • 58149098561 scopus 로고    scopus 로고
    • COP1 functions as a FoxO1 ubiquitin E3 ligase to regulate FoxO1-mediated gene expression
    • Kato S, Ding J, Pisch E, Jhala US, Du K. COP1 functions as a FoxO1 ubiquitin E3 ligase to regulate FoxO1-mediated gene expression. J Biol Chem 283: 35464-35473, 2008.
    • (2008) J Biol Chem , vol.283 , pp. 35464-35473
    • Kato, S.1    Ding, J.2    Pisch, E.3    Jhala, U.S.4    Du, K.5
  • 34
    • 84857863782 scopus 로고    scopus 로고
    • Risk factors for chronic thromboembolic pulmonary hypertension
    • Kim NH, Lang IM. Risk factors for chronic thromboembolic pulmonary hypertension. Eur Respir Rev 21: 27-31, 2012.
    • (2012) Eur Respir Rev , vol.21 , pp. 27-31
    • Kim, N.H.1    Lang, I.M.2
  • 35
    • 77953204815 scopus 로고    scopus 로고
    • Salt sensitivity and circadian rhythm of blood pressure: The keys to connect CKD with cardiovascular events
    • Kimura G, Dohi Y, Fukuda M. Salt sensitivity and circadian rhythm of blood pressure: the keys to connect CKD with cardiovascular events. Hypertens Res 33: 515-520, 2010.
    • (2010) Hypertens Res , vol.33 , pp. 515-520
    • Kimura, G.1    Dohi, Y.2    Fukuda, M.3
  • 36
    • 84863682484 scopus 로고    scopus 로고
    • Integration of metabolic and cardiovascular diurnal rhythms by circadian clock
    • Kohsaka A, Waki H, Cui H, Gouranud SS, Maeda M. Integration of metabolic and cardiovascular diurnal rhythms by circadian clock. Endocr J 59: 447-456, 2012.
    • (2012) Endocr J , vol.59 , pp. 447-456
    • Kohsaka, A.1    Waki, H.2    Cui, H.3    Gouranud, S.S.4    Maeda, M.5
  • 38
    • 75849128796 scopus 로고    scopus 로고
    • Essential roles of CKIdelta and CKIepsilon in the mammalian circadian clock
    • Lee H, Chen R, Lee Y, Yoo S, Lee C. Essential roles of CKIdelta and CKIepsilon in the mammalian circadian clock. Proc Natl Acad Sci USA 106: 21359-21364, 2009.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 21359-21364
    • Lee, H.1    Chen, R.2    Lee, Y.3    Yoo, S.4    Lee, C.5
  • 39
    • 33845750086 scopus 로고    scopus 로고
    • Substitution mapping in Dahl rats identifies two distinct blood pressure quantitative trait loci within 1.12-and 125-mb intervals on chromosome 3
    • Lee SJ, Liu J, Westcott AM, Vieth JA, DeRaedt SJ, Yang S, Joe B, Cicila GT. Substitution mapping in Dahl rats identifies two distinct blood pressure quantitative trait loci within 1.12-and 125-mb intervals on chromosome 3. Genetics 74: 2203-2213, 2006.
    • (2006) Genetics , vol.74 , pp. 2203-2213
    • Lee, S.J.1    Liu, J.2    Westcott, A.M.3    Vieth, J.A.4    DeRaedt, S.J.5    Yang, S.6    Joe, B.7    Cicila, G.T.8
  • 41
    • 79958836341 scopus 로고    scopus 로고
    • Hypertension as a mitochondrial and metabolic disease
    • Liang M. Hypertension as a mitochondrial and metabolic disease. Kidney Int 80: 15-16, 2011.
    • (2011) Kidney Int , vol.80 , pp. 15-16
    • Liang, M.1
  • 42
    • 84897061863 scopus 로고    scopus 로고
    • Base-resolution maps of 5-methylcytosine and 5-hydroxycytosine in Dahl S rats: Effect of salt and genomic sequence
    • Liu Y, Liu P, Yang C, Cowley AW Jr, Liang M. Base-resolution maps of 5-methylcytosine and 5-hydroxycytosine in Dahl S rats: effect of salt and genomic sequence. Hypertension 63: 827-838, 2014.
    • (2014) Hypertension , vol.63 , pp. 827-838
    • Liu, Y.1    Liu, P.2    Yang, C.3    Cowley Jr., A.W.4    Liang, M.5
  • 44
    • 0023113462 scopus 로고
    • Endothelium-dependent vascular responses in normotensive and hypertensive Dahl rats
    • Lusher TF, Raij L, Vanhoutte PM. Endothelium-dependent vascular responses in normotensive and hypertensive Dahl rats. Hypertension 9: 157-163, 1987.
    • (1987) Hypertension , vol.9 , pp. 157-163
    • Lusher, T.F.1    Raij, L.2    Vanhoutte, P.M.3
  • 45
    • 55549147191 scopus 로고    scopus 로고
    • Personal genomes: The case of the missing heritability
    • Maher B. Personal genomes: the case of the missing heritability. Nature 456: 18-21, 2008.
    • (2008) Nature , vol.456 , pp. 18-21
    • Maher, B.1
  • 46
    • 84862763474 scopus 로고    scopus 로고
    • Spotlight on the role of COP1 in tumorigenesis
    • Marine JC. Spotlight on the role of COP1 in tumorigenesis. Nat Rev Cancer 12: 455-464, 2012.
    • (2012) Nat Rev Cancer , vol.12 , pp. 455-464
    • Marine, J.C.1
  • 55
    • 3042808652 scopus 로고    scopus 로고
    • Effect of high glucose on gene expression in mesangial cells: Upregulation of the thiol pathway is an adaptational response
    • Morrison J, Knoll K, Hessner MJ, Liang M. Effect of high glucose on gene expression in mesangial cells: upregulation of the thiol pathway is an adaptational response. Physiol Genomics 17: 271-282, 2004.
    • (2004) Physiol Genomics , vol.17 , pp. 271-282
    • Morrison, J.1    Knoll, K.2    Hessner, M.J.3    Liang, M.4
  • 57
    • 0033979807 scopus 로고    scopus 로고
    • Genetic analysis of inherited hypertension in the rat
    • Rapp JP. Genetic analysis of inherited hypertension in the rat. Physiol Rev 80: 135-172, 2000.
    • (2000) Physiol Rev , vol.80 , pp. 135-172
    • Rapp, J.P.1
  • 59
    • 84884572842 scopus 로고    scopus 로고
    • Role of Per1 and the mineralocorticoid receptor in the coordinate regulation of ENaC in renal cortical collecting duct cells
    • Richards J, Jeffers LA, All SC, Cheng KY, Gumz ML. Role of Per1 and the mineralocorticoid receptor in the coordinate regulation of ENaC in renal cortical collecting duct cells. Front Physiol 4: 253, 2013.
    • (2013) Front Physiol , vol.4 , pp. 253
    • Richards, J.1    Jeffers, L.A.2    All, S.C.3    Cheng, K.Y.4    Gumz, M.L.5
  • 60
    • 70350124051 scopus 로고    scopus 로고
    • Pressed for time: The circadian clock and hypertension
    • Rudic RD, Fulton DJ. Pressed for time: the circadian clock and hypertension. Appl Physiol 107: 1328-1338, 2009.
    • (2009) Appl Physiol , vol.107 , pp. 1328-1338
    • Rudic, R.D.1    Fulton, D.J.2
  • 63
    • 15944364151 scopus 로고    scopus 로고
    • An empirical Bayes approach to inferring large-scale gene association networks
    • Schäfer J, Strimmer K. An empirical Bayes approach to inferring large-scale gene association networks. Bioinformatics 21: 754-764, 2005.
    • (2005) Bioinformatics , vol.21 , pp. 754-764
    • Schäfer, J.1    Strimmer, K.2
  • 65
    • 80053590625 scopus 로고    scopus 로고
    • Incorporating biological information into linear models: A Bayesian approach to the selection of pathways and genes
    • Stingo FC, Chen YA, Tadesse MG, Vannucci M. Incorporating biological information into linear models: a Bayesian approach to the selection of pathways and genes. Ann Appl Stat 5: 1978-2002, 2011.
    • (2011) Ann Appl Stat , vol.5 , pp. 1978-2002
    • Stingo, F.C.1    Chen, Y.A.2    Tadesse, M.G.3    Vannucci, M.4
  • 66
    • 0023890426 scopus 로고
    • Sodium sensitivity in normotensive and borderline hypertensive humans
    • Sullivan JM, Prewitt RL, Ratts TE. Sodium sensitivity in normotensive and borderline hypertensive humans. Am J Med Sci 295: 370-377, 1988.
    • (1988) Am J Med Sci , vol.295 , pp. 370-377
    • Sullivan, J.M.1    Prewitt, R.L.2    Ratts, T.E.3
  • 68
    • 0029974040 scopus 로고    scopus 로고
    • Heritability of salt sensitivity in black Americans
    • Svetkey LP, McKeown SP, Wilson AF. Heritability of salt sensitivity in black Americans. Hypertension 28: 854-858, 1996.
    • (1996) Hypertension , vol.28 , pp. 854-858
    • Svetkey, L.P.1    McKeown, S.P.2    Wilson, A.F.3
  • 69
    • 33645832749 scopus 로고    scopus 로고
    • NADPH oxidase in the renal medulla causes oxidative stress and contributes to salt-sensitive hypertension in Dahl S rats
    • Taylor NE, Glocka P, Liang M, Cowley AW Jr. NADPH oxidase in the renal medulla causes oxidative stress and contributes to salt-sensitive hypertension in Dahl S rats. Hypertension 47: 692-698, 2006.
    • (2006) Hypertension , vol.47 , pp. 692-698
    • Taylor, N.E.1    Glocka, P.2    Liang, M.3    Cowley Jr., A.W.4
  • 70
    • 77952050701 scopus 로고    scopus 로고
    • Analysis of the expression and function of BRINP family genes during neuronal differentiation in mouse embryonic stem cell-derived neural stem cells
    • Terashima M, Kobayashi M, Motomiya M, Inoue N, Yoshida T, Okano H, Iwasaki N, Minami A, Matsuoka I. Analysis of the expression and function of BRINP family genes during neuronal differentiation in mouse embryonic stem cell-derived neural stem cells. J Neurosci Res 88: 1387-1393, 2010.
    • (2010) J Neurosci Res , vol.88 , pp. 1387-1393
    • Terashima, M.1    Kobayashi, M.2    Motomiya, M.3    Inoue, N.4    Yoshida, T.5    Okano, H.6    Iwasaki, N.7    Minami, A.8    Matsuoka, I.9
  • 74
    • 84863117817 scopus 로고    scopus 로고
    • Efficient Gaussian graphical model determination under G-Wishart prior distributions
    • Wang H, Li SZ. Efficient Gaussian graphical model determination under G-Wishart prior distributions. Electron J Stat 6: 168-198, 2012.
    • (2012) Electron J Stat , vol.6 , pp. 168-198
    • Wang, H.1    Li, S.Z.2
  • 75
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: Functional annotation of genetic variants from next-generation sequencing data
    • Wang K, Li M, Haronarson H. ANNOVAR: functional annotation of genetic variants from next-generation sequencing data. Nucleic Acids Res 38: e164, 2010.
    • (2010) Nucleic Acids Res , vol.38
    • Wang, K.1    Li, M.2    Haronarson, H.3
  • 76
    • 0029928474 scopus 로고    scopus 로고
    • Salt sensitivity of blood pressure in humans
    • Weinberger MH. Salt sensitivity of blood pressure in humans. Hypertension 27: 481-490, 1996.
    • (1996) Hypertension , vol.27 , pp. 481-490
    • Weinberger, M.H.1
  • 78
    • 84865819868 scopus 로고    scopus 로고
    • Mitochondrial proteomic analysis reveals deficiencies in oxygen utilization in medullary thick ascending limb of Henle in the Dahl salt-sensitive rat
    • Zheleznova NN, Yang C, Ryan RP, Halligan BD, Liang M, Greene AS, Cowley AW Jr. Mitochondrial proteomic analysis reveals deficiencies in oxygen utilization in medullary thick ascending limb of Henle in the Dahl salt-sensitive rat. Physiol Genomics 44: 829-842, 2012.
    • (2012) Physiol Genomics , vol.44 , pp. 829-842
    • Zheleznova, N.N.1    Yang, C.2    Ryan, R.P.3    Halligan, B.D.4    Liang, M.5    Greene, A.S.6    Cowley Jr., A.W.7
  • 79
    • 0029947209 scopus 로고    scopus 로고
    • CNS gene encoding astrotactin, which supports neuronal migration along glial fibers
    • Zheng C, Heintz N, Hatten ME. CNS gene encoding astrotactin, which supports neuronal migration along glial fibers. Science 272: 417-419, 1996.
    • (1996) Science , vol.272 , pp. 417-419
    • Zheng, C.1    Heintz, N.2    Hatten, M.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.