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Volumn 545, Issue 1, 2014, Pages 5-14

Codon usage bias in human cytomegalovirus and its biological implication

Author keywords

Codon usage bias; Host relating protein; Human herpesvirus 5

Indexed keywords

NUCLEOTIDE; CODON;

EID: 84901199688     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2014.05.018     Document Type: Article
Times cited : (23)

References (109)
  • 2
    • 79955455495 scopus 로고    scopus 로고
    • Cytomegalovirus UL103 controls virion and dense body egress
    • Ahlqvist J., Mocarski E. Cytomegalovirus UL103 controls virion and dense body egress. Journal of Virology 2011, 85:5125-5135.
    • (2011) Journal of Virology , vol.85 , pp. 5125-5135
    • Ahlqvist, J.1    Mocarski, E.2
  • 3
    • 70450195152 scopus 로고    scopus 로고
    • NKG2D ligand MICA is retained in the cis-Golgi apparatus by human cytomegalovirus protein UL142
    • Ashiru O., Bennett N.J., Boyle L.H., Thomas M., Trowsdale J., Wills M.R. NKG2D ligand MICA is retained in the cis-Golgi apparatus by human cytomegalovirus protein UL142. Journal of Virology 2009, 83:12345-12354.
    • (2009) Journal of Virology , vol.83 , pp. 12345-12354
    • Ashiru, O.1    Bennett, N.J.2    Boyle, L.H.3    Thomas, M.4    Trowsdale, J.5    Wills, M.R.6
  • 4
    • 0037119463 scopus 로고    scopus 로고
    • Specific phosphorylation of exogenous protein and peptide substrates by the human cytomegalovirus UL97 protein kinase. Importance of the P+5 position
    • Baek M.C., Krosky P.M., He Z., Coen D.M. Specific phosphorylation of exogenous protein and peptide substrates by the human cytomegalovirus UL97 protein kinase. Importance of the P+5 position. Journal of Biological Chemistry 2002, 277:29593-29599.
    • (2002) Journal of Biological Chemistry , vol.277 , pp. 29593-29599
    • Baek, M.C.1    Krosky, P.M.2    He, Z.3    Coen, D.M.4
  • 5
    • 0030708807 scopus 로고    scopus 로고
    • Deletion mutants of the herpes simplex virus type 1 UL8 protein: effect on DNA synthesis and ability to interact with and influence the intracellular localization of the UL5 and UL52 proteins
    • Barnard E.C., Brown G., Stow N.D. Deletion mutants of the herpes simplex virus type 1 UL8 protein: effect on DNA synthesis and ability to interact with and influence the intracellular localization of the UL5 and UL52 proteins. Virology 1997, 237:97-106.
    • (1997) Virology , vol.237 , pp. 97-106
    • Barnard, E.C.1    Brown, G.2    Stow, N.D.3
  • 6
    • 0036149161 scopus 로고    scopus 로고
    • Human cytomegalovirus UL47 tegument protein functions after entry and before immediate-early gene expression
    • Bechtel J.T., Shenk T. Human cytomegalovirus UL47 tegument protein functions after entry and before immediate-early gene expression. Journal of Virology 2002, 76:1043-1050.
    • (2002) Journal of Virology , vol.76 , pp. 1043-1050
    • Bechtel, J.T.1    Shenk, T.2
  • 7
    • 39749151703 scopus 로고    scopus 로고
    • The essential human cytomegalovirus gene UL52 is required for cleavage-packaging of the viral genome
    • Borst E.M., Wagner K., Binz A., Sodeik B., Messerle M. The essential human cytomegalovirus gene UL52 is required for cleavage-packaging of the viral genome. Journal of Virology 2008, 82:2065-2078.
    • (2008) Journal of Virology , vol.82 , pp. 2065-2078
    • Borst, E.M.1    Wagner, K.2    Binz, A.3    Sodeik, B.4    Messerle, M.5
  • 13
    • 0033775050 scopus 로고    scopus 로고
    • Activation of transcription of the human cytomegalovirus early UL4 promoter by the Ets transcription factor binding element
    • Chen J., Stinski M.F. Activation of transcription of the human cytomegalovirus early UL4 promoter by the Ets transcription factor binding element. Journal of Virology 2000, 74:9845-9857.
    • (2000) Journal of Virology , vol.74 , pp. 9845-9857
    • Chen, J.1    Stinski, M.F.2
  • 14
    • 77950507790 scopus 로고    scopus 로고
    • The role of the human cytomegalovirus UL111A gene in down-regulating CD4+ T-cell recognition of latently infected cells: implications for virus elimination during latency
    • Cheung A.K., Gottlieb D.J., Plachter B., Pepperl-Klindworth S., Avdic S., Cunningham A.L., Abendroth A., Slobedman B. The role of the human cytomegalovirus UL111A gene in down-regulating CD4+ T-cell recognition of latently infected cells: implications for virus elimination during latency. Blood 2009, 114:4128-4137.
    • (2009) Blood , vol.114 , pp. 4128-4137
    • Cheung, A.K.1    Gottlieb, D.J.2    Plachter, B.3    Pepperl-Klindworth, S.4    Avdic, S.5    Cunningham, A.L.6    Abendroth, A.7    Slobedman, B.8
  • 15
    • 0027054450 scopus 로고
    • Diagrammatization of codon usage in 339 human immunodeficiency virus proteins and its biological implication
    • Chou K.C., Zhang C.T. Diagrammatization of codon usage in 339 human immunodeficiency virus proteins and its biological implication. AIDS Research and Human Retroviruses 1992, 8:1967-1976.
    • (1992) AIDS Research and Human Retroviruses , vol.8 , pp. 1967-1976
    • Chou, K.C.1    Zhang, C.T.2
  • 19
    • 34147141258 scopus 로고    scopus 로고
    • Members of the HCMV US12 family of predicted heptaspanning membrane proteins have unique intracellular distributions, including association with the cytoplasmic virion assembly complex
    • Das S., Pellett P.E. Members of the HCMV US12 family of predicted heptaspanning membrane proteins have unique intracellular distributions, including association with the cytoplasmic virion assembly complex. Virology 2007, 361:263-273.
    • (2007) Virology , vol.361 , pp. 263-273
    • Das, S.1    Pellett, P.E.2
  • 20
    • 33646508541 scopus 로고    scopus 로고
    • Synonymous codon usage in adenoviruses: influence of mutation, selection and protein hydropathy
    • Das S., Paul S., Dutta C. Synonymous codon usage in adenoviruses: influence of mutation, selection and protein hydropathy. Virus Research 2006, 117:227-236.
    • (2006) Virus Research , vol.117 , pp. 227-236
    • Das, S.1    Paul, S.2    Dutta, C.3
  • 21
    • 84861790274 scopus 로고    scopus 로고
    • Insight into pattern of codon biasness and nucleotide base usage in serotonin receptor gene family from different mammalian species
    • Dass J.F., Sudandiradoss C. Insight into pattern of codon biasness and nucleotide base usage in serotonin receptor gene family from different mammalian species. Gene 2012, 503:92-100.
    • (2012) Gene , vol.503 , pp. 92-100
    • Dass, J.F.1    Sudandiradoss, C.2
  • 25
  • 27
    • 72849131562 scopus 로고    scopus 로고
    • Human cytomegalovirus gene UL21a encodes a short-lived cytoplasmic protein and facilitates virus replication in fibroblasts
    • Fehr A.R., Yu D. Human cytomegalovirus gene UL21a encodes a short-lived cytoplasmic protein and facilitates virus replication in fibroblasts. Journal of Virology 2010, 84:291-302.
    • (2010) Journal of Virology , vol.84 , pp. 291-302
    • Fehr, A.R.1    Yu, D.2
  • 28
    • 33748659012 scopus 로고    scopus 로고
    • Human cytomegalovirus pUS24 is a virion protein that functions very early in the replication cycle
    • Feng X., Schroer J., Yu D., Shenk T. Human cytomegalovirus pUS24 is a virion protein that functions very early in the replication cycle. Journal of Virology 2006, 80:8371-8378.
    • (2006) Journal of Virology , vol.80 , pp. 8371-8378
    • Feng, X.1    Schroer, J.2    Yu, D.3    Shenk, T.4
  • 31
    • 77949908785 scopus 로고    scopus 로고
    • Codon usage bias in herpesvirus
    • Fu M. Codon usage bias in herpesvirus. Archives of Virology 2010, 155:391-396.
    • (2010) Archives of Virology , vol.155 , pp. 391-396
    • Fu, M.1
  • 32
    • 43949116239 scopus 로고    scopus 로고
    • T cell response to the cytomegalovirus major capsid protein (UL86) is dominated by helper cells with a large polyfunctional component and diverse epitope recognition
    • Fuhrmann S., Streitz M., Reinke P., Volk H.D., Kern F. T cell response to the cytomegalovirus major capsid protein (UL86) is dominated by helper cells with a large polyfunctional component and diverse epitope recognition. Journal of Infectious Diseases 2008, 197:1455-1458.
    • (2008) Journal of Infectious Diseases , vol.197 , pp. 1455-1458
    • Fuhrmann, S.1    Streitz, M.2    Reinke, P.3    Volk, H.D.4    Kern, F.5
  • 34
    • 77956629302 scopus 로고    scopus 로고
    • Nucleocytoplasmic shuttling of human cytomegalovirus UL84 is essential for virus growth
    • Gao Y., Kagele D., Smallenberg K., Pari G.S. Nucleocytoplasmic shuttling of human cytomegalovirus UL84 is essential for virus growth. Journal of Virology 2010, 84:8484-8494.
    • (2010) Journal of Virology , vol.84 , pp. 8484-8494
    • Gao, Y.1    Kagele, D.2    Smallenberg, K.3    Pari, G.S.4
  • 35
    • 0020491327 scopus 로고
    • Codon usage in bacteria: correlation with gene expressivity
    • Gouy M., Gautier C. Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Research 1982, 10:7055-7074.
    • (1982) Nucleic Acids Research , vol.10 , pp. 7055-7074
    • Gouy, M.1    Gautier, C.2
  • 38
    • 80054848456 scopus 로고    scopus 로고
    • Resistance to maribavir is associated with the exclusion of pUL27 from nucleoli during human cytomegalovirus infection
    • Hakki M., Drummond C., Houser B., Marousek G., Chou S. Resistance to maribavir is associated with the exclusion of pUL27 from nucleoli during human cytomegalovirus infection. Antiviral Research 2011, 92:313-318.
    • (2011) Antiviral Research , vol.92 , pp. 313-318
    • Hakki, M.1    Drummond, C.2    Houser, B.3    Marousek, G.4    Chou, S.5
  • 41
    • 84873699387 scopus 로고    scopus 로고
    • The expression of interleukin-32 is activated by human cytomegalovirus infection and down regulated by hcmv-miR-UL112-1
    • Huang Y., Qi Y., Ma Y., He R., Ji Y., Sun Z., Ruan Q. The expression of interleukin-32 is activated by human cytomegalovirus infection and down regulated by hcmv-miR-UL112-1. Virology Journal 2013, 10:51.
    • (2013) Virology Journal , vol.10 , pp. 51
    • Huang, Y.1    Qi, Y.2    Ma, Y.3    He, R.4    Ji, Y.5    Sun, Z.6    Ruan, Q.7
  • 42
    • 0019824131 scopus 로고
    • Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system
    • Ikemura T. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system. Journal of Molecular Biology 1981, 151:389-409.
    • (1981) Journal of Molecular Biology , vol.151 , pp. 389-409
    • Ikemura, T.1
  • 43
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura T. Codon usage and tRNA content in unicellular and multicellular organisms. Molecular Biology and Evolution 1985, 2:13-34.
    • (1985) Molecular Biology and Evolution , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 44
    • 56649091351 scopus 로고    scopus 로고
    • Molecular evolution of synonymous codon usage in Populus
    • Ingvarsson P.K. Molecular evolution of synonymous codon usage in Populus. BMC Evolutionary Biology 2008, 8:307.
    • (2008) BMC Evolutionary Biology , vol.8 , pp. 307
    • Ingvarsson, P.K.1
  • 45
    • 80052614840 scopus 로고    scopus 로고
    • The polymorphic HCMV glycoprotein UL20 is targeted for lysosomal degradation by multiple cytoplasmic dileucine motifs
    • Jelcic I., Reichel J., Schlude C., Treutler E., Sinzger C., Steinle A. The polymorphic HCMV glycoprotein UL20 is targeted for lysosomal degradation by multiple cytoplasmic dileucine motifs. Traffic 2011, 12:1444-1456.
    • (2011) Traffic , vol.12 , pp. 1444-1456
    • Jelcic, I.1    Reichel, J.2    Schlude, C.3    Treutler, E.4    Sinzger, C.5    Steinle, A.6
  • 48
    • 84857035583 scopus 로고    scopus 로고
    • Analysis of the interactions of viral and cellular factors with human cytomegalovirus lytic origin of replication, oriLyt
    • Kagele D., Rossetto C.C., Tarrant M.T., Pari G.S. Analysis of the interactions of viral and cellular factors with human cytomegalovirus lytic origin of replication, oriLyt. Virology 2012, 424:106-114.
    • (2012) Virology , vol.424 , pp. 106-114
    • Kagele, D.1    Rossetto, C.C.2    Tarrant, M.T.3    Pari, G.S.4
  • 49
    • 0346688644 scopus 로고    scopus 로고
    • Role of a mutation in human cytomegalovirus gene UL104 in resistance to benzimidazole ribonucleosides
    • Komazin G., Townsend L.B., Drach J.C. Role of a mutation in human cytomegalovirus gene UL104 in resistance to benzimidazole ribonucleosides. Journal of Virology 2004, 78:710-715.
    • (2004) Journal of Virology , vol.78 , pp. 710-715
    • Komazin, G.1    Townsend, L.B.2    Drach, J.C.3
  • 51
    • 0035146499 scopus 로고    scopus 로고
    • The tegument protein pp UL25 of human cytomegalovirus (CMV) is a major target antigen for the anti-CMV antibody response
    • Lazzarotto T., Varani S., Gabrielli L., Pignatelli S., Landini M.P. The tegument protein pp UL25 of human cytomegalovirus (CMV) is a major target antigen for the anti-CMV antibody response. Journal of General Virology 2001, 82:335-338.
    • (2001) Journal of General Virology , vol.82 , pp. 335-338
    • Lazzarotto, T.1    Varani, S.2    Gabrielli, L.3    Pignatelli, S.4    Landini, M.P.5
  • 53
    • 84878239979 scopus 로고    scopus 로고
    • Antibodies against neutralization epitopes of human cytomegalovirus gH/gL/pUL128-130-131 complex and virus spreading may correlate with virus control in vivo
    • Lilleri D., Kabanova A., Lanzavecchia A., Gerna G. Antibodies against neutralization epitopes of human cytomegalovirus gH/gL/pUL128-130-131 complex and virus spreading may correlate with virus control in vivo. Journal of Clinical Immunology 2012, 32:1324-1331.
    • (2012) Journal of Clinical Immunology , vol.32 , pp. 1324-1331
    • Lilleri, D.1    Kabanova, A.2    Lanzavecchia, A.3    Gerna, G.4
  • 54
    • 84874722258 scopus 로고    scopus 로고
    • Human cytomegalovirus UL34 binds to multiple sites within the viral genome
    • Liu Z., Biegalke B.J. Human cytomegalovirus UL34 binds to multiple sites within the viral genome. Journal of Virology 2013, 87:3587-3591.
    • (2013) Journal of Virology , vol.87 , pp. 3587-3591
    • Liu, Z.1    Biegalke, B.J.2
  • 56
    • 0028088517 scopus 로고
    • Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes
    • Lobry J.R., Gautier C. Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes. Nucleic Acids Research 1994, 22:3174-3180.
    • (1994) Nucleic Acids Research , vol.22 , pp. 3174-3180
    • Lobry, J.R.1    Gautier, C.2
  • 57
    • 33646727991 scopus 로고    scopus 로고
    • Deletion of open reading frame UL26 from the human cytomegalovirus genome results in reduced viral growth, which involves impaired stability of viral particles
    • Lorz K., Hofmann H., Berndt A., Tavalai N., Mueller R., Schlotzer-Schrehardt U., Stamminger T. Deletion of open reading frame UL26 from the human cytomegalovirus genome results in reduced viral growth, which involves impaired stability of viral particles. Journal of Virology 2006, 80:5423-5434.
    • (2006) Journal of Virology , vol.80 , pp. 5423-5434
    • Lorz, K.1    Hofmann, H.2    Berndt, A.3    Tavalai, N.4    Mueller, R.5    Schlotzer-Schrehardt, U.6    Stamminger, T.7
  • 58
    • 77950584882 scopus 로고    scopus 로고
    • The cytomegalovirus UL146 gene product vCXCL1 targets both CXCR1 and CXCR2 as an agonist
    • Luttichau H.R. The cytomegalovirus UL146 gene product vCXCL1 targets both CXCR1 and CXCR2 as an agonist. Journal of Biological Chemistry 2010, 285:9137-9146.
    • (2010) Journal of Biological Chemistry , vol.285 , pp. 9137-9146
    • Luttichau, H.R.1
  • 60
    • 70349290582 scopus 로고    scopus 로고
    • Human cytomegalovirus UL28 and UL29 open reading frames encode a spliced mRNA and stimulate accumulation of immediate-early RNAs
    • Mitchell D.P., Savaryn J.P., Moorman N.J., Shenk T., Terhune S.S. Human cytomegalovirus UL28 and UL29 open reading frames encode a spliced mRNA and stimulate accumulation of immediate-early RNAs. Journal of Virology 2009, 83:10187-10197.
    • (2009) Journal of Virology , vol.83 , pp. 10187-10197
    • Mitchell, D.P.1    Savaryn, J.P.2    Moorman, N.J.3    Shenk, T.4    Terhune, S.S.5
  • 61
    • 84929273361 scopus 로고    scopus 로고
    • Betaherpes viral genes and their functions
    • Cambridge University Press, Cambridge, A. Arvin, G. Campadelli-Fiume, E. Mocarski, P.S. Moore, B. Roizman, R. Whitley, K. Yamanishi (Eds.)
    • Mocarski E. Betaherpes viral genes and their functions. Human Herpesviruses: Biology, Therapy, and Immunoprophylaxis 2007, Cambridge University Press, Cambridge. A. Arvin, G. Campadelli-Fiume, E. Mocarski, P.S. Moore, B. Roizman, R. Whitley, K. Yamanishi (Eds.).
    • (2007) Human Herpesviruses: Biology, Therapy, and Immunoprophylaxis
    • Mocarski, E.1
  • 62
    • 84929272699 scopus 로고    scopus 로고
    • Comparative analysis of herpesvirus - common proteins
    • Cambridge University Press, Cambridge, A. Arvin, G. Campadelli-Fiume, E. Mocarski, P.S. Moore, B. Roizman, R. Whitley, K. Yamanishi (Eds.)
    • Mocarski E.S. Comparative analysis of herpesvirus - common proteins. Human Herpesviruses: Biology, Therapy, and Immunoprophylaxis 2007, Cambridge University Press, Cambridge. A. Arvin, G. Campadelli-Fiume, E. Mocarski, P.S. Moore, B. Roizman, R. Whitley, K. Yamanishi (Eds.).
    • (2007) Human Herpesviruses: Biology, Therapy, and Immunoprophylaxis
    • Mocarski, E.S.1
  • 63
    • 80055115106 scopus 로고    scopus 로고
    • The latency-associated UL138 gene product of human cytomegalovirus sensitizes cells to tumor necrosis factor alpha (TNF-alpha) signaling by upregulating TNF-alpha receptor 1 cell surface expression
    • Montag C., Wagner J.A., Gruska I., Vetter B., Wiebusch L., Hagemeier C. The latency-associated UL138 gene product of human cytomegalovirus sensitizes cells to tumor necrosis factor alpha (TNF-alpha) signaling by upregulating TNF-alpha receptor 1 cell surface expression. Journal of Virology 2011, 85:11409-11421.
    • (2011) Journal of Virology , vol.85 , pp. 11409-11421
    • Montag, C.1    Wagner, J.A.2    Gruska, I.3    Vetter, B.4    Wiebusch, L.5    Hagemeier, C.6
  • 66
    • 84869013584 scopus 로고    scopus 로고
    • Human cytomegalovirus pUL78 G protein-coupled receptor homologue is required for timely cell entry in epithelial cells but not fibroblasts
    • O'Connor C.M., Shenk T. Human cytomegalovirus pUL78 G protein-coupled receptor homologue is required for timely cell entry in epithelial cells but not fibroblasts. Journal of Virology 2012, 86:11425-11433.
    • (2012) Journal of Virology , vol.86 , pp. 11425-11433
    • O'Connor, C.M.1    Shenk, T.2
  • 67
    • 0036223770 scopus 로고    scopus 로고
    • Human cytomegalovirus (HCMV)-infected endothelial cells and macrophages are less susceptible to natural killer lysis independent of the downregulation of classical HLA class I molecules or expression of the HCMV class I homologue, UL18
    • Odeberg J., Cerboni C., Browne H., Karre K., Moller E., Carbone E., Soderberg-Naucler C. Human cytomegalovirus (HCMV)-infected endothelial cells and macrophages are less susceptible to natural killer lysis independent of the downregulation of classical HLA class I molecules or expression of the HCMV class I homologue, UL18. Scandinavian Journal of Immunology 2002, 55:149-161.
    • (2002) Scandinavian Journal of Immunology , vol.55 , pp. 149-161
    • Odeberg, J.1    Cerboni, C.2    Browne, H.3    Karre, K.4    Moller, E.5    Carbone, E.6    Soderberg-Naucler, C.7
  • 68
    • 84055182522 scopus 로고    scopus 로고
    • Differential trends in the codon usage patterns in HIV-1 genes
    • Pandit A., Sinha S. Differential trends in the codon usage patterns in HIV-1 genes. PLoS One 2011, 6:e28889.
    • (2011) PLoS One , vol.6
    • Pandit, A.1    Sinha, S.2
  • 69
    • 0036533565 scopus 로고    scopus 로고
    • The MHC class I homolog of human cytomegalovirus is resistant to down-regulation mediated by the unique short region protein (US)2, US3, US6, and US11 gene products
    • Park B., Oh H., Lee S., Song Y., Shin J., Sung Y.C., Hwang S.Y., Ahn K. The MHC class I homolog of human cytomegalovirus is resistant to down-regulation mediated by the unique short region protein (US)2, US3, US6, and US11 gene products. Journal of Immunology 2002, 168:3464-3469.
    • (2002) Journal of Immunology , vol.168 , pp. 3464-3469
    • Park, B.1    Oh, H.2    Lee, S.3    Song, Y.4    Shin, J.5    Sung, Y.C.6    Hwang, S.Y.7    Ahn, K.8
  • 72
    • 79955384525 scopus 로고    scopus 로고
    • The human cytomegalovirus gene UL79 is required for the accumulation of late viral transcripts
    • Perng Y.C., Qian Z., Fehr A.R., Xuan B., Yu D. The human cytomegalovirus gene UL79 is required for the accumulation of late viral transcripts. Journal of Virology 2011, 85:4841-4852.
    • (2011) Journal of Virology , vol.85 , pp. 4841-4852
    • Perng, Y.C.1    Qian, Z.2    Fehr, A.R.3    Xuan, B.4    Yu, D.5
  • 73
    • 84866180615 scopus 로고    scopus 로고
    • Interaction between the human cytomegalovirus tegument proteins UL94 and UL99 is essential for virus replication
    • Phillips S.L., Cygnar D., Thomas A., Bresnahan W.A. Interaction between the human cytomegalovirus tegument proteins UL94 and UL99 is essential for virus replication. Journal of Virology 2012, 86:9995-10005.
    • (2012) Journal of Virology , vol.86 , pp. 9995-10005
    • Phillips, S.L.1    Cygnar, D.2    Thomas, A.3    Bresnahan, W.A.4
  • 74
    • 42449083299 scopus 로고    scopus 로고
    • NF-kappaB-mediated activation of the chemokine CCL22 by the product of the human cytomegalovirus gene UL144 escapes regulation by viral IE86
    • Poole E., Atkins E., Nakayama T., Yoshie O., Groves I., Alcami A., Sinclair J. NF-kappaB-mediated activation of the chemokine CCL22 by the product of the human cytomegalovirus gene UL144 escapes regulation by viral IE86. Journal of Virology 2008, 82:4250-4256.
    • (2008) Journal of Virology , vol.82 , pp. 4250-4256
    • Poole, E.1    Atkins, E.2    Nakayama, T.3    Yoshie, O.4    Groves, I.5    Alcami, A.6    Sinclair, J.7
  • 77
    • 80052287736 scopus 로고    scopus 로고
    • The human cytomegalovirus protein pUL38 suppresses endoplasmic reticulum stress-mediated cell death independently of its ability to induce mTORC1 activation
    • Qian Z., Xuan B., Gualberto N., Yu D. The human cytomegalovirus protein pUL38 suppresses endoplasmic reticulum stress-mediated cell death independently of its ability to induce mTORC1 activation. Journal of Virology 2011, 85:9103-9113.
    • (2011) Journal of Virology , vol.85 , pp. 9103-9113
    • Qian, Z.1    Xuan, B.2    Gualberto, N.3    Yu, D.4
  • 78
    • 84858988544 scopus 로고    scopus 로고
    • The chromatin remodeling factor SMARCB1 forms a complex with human cytomegalovirus proteins UL114 and UL44
    • Ranneberg-Nilsen T., Rollag H., Slettebakk R., Backe P.H., Olsen O., Luna L., Bjoras M. The chromatin remodeling factor SMARCB1 forms a complex with human cytomegalovirus proteins UL114 and UL44. PLoS One 2012, 7:e34119.
    • (2012) PLoS One , vol.7
    • Ranneberg-Nilsen, T.1    Rollag, H.2    Slettebakk, R.3    Backe, P.H.4    Olsen, O.5    Luna, L.6    Bjoras, M.7
  • 79
    • 75149157626 scopus 로고    scopus 로고
    • A detailed comparative analysis on the overall codon usage pattern in herpesviruses
    • Roychoudhury S., Mukherjee D. A detailed comparative analysis on the overall codon usage pattern in herpesviruses. Virus Research 2010, 148:31-43.
    • (2010) Virus Research , vol.148 , pp. 31-43
    • Roychoudhury, S.1    Mukherjee, D.2
  • 80
    • 30344435010 scopus 로고    scopus 로고
    • Human cytomegalovirus entry into epithelial and endothelial cells depends on genes UL128 to UL150 and occurs by endocytosis and low-pH fusion
    • Ryckman B.J., Jarvis M.A., Drummond D.D., Nelson J.A., Johnson D.C. Human cytomegalovirus entry into epithelial and endothelial cells depends on genes UL128 to UL150 and occurs by endocytosis and low-pH fusion. Journal of Virology 2006, 80:710-722.
    • (2006) Journal of Virology , vol.80 , pp. 710-722
    • Ryckman, B.J.1    Jarvis, M.A.2    Drummond, D.D.3    Nelson, J.A.4    Johnson, D.C.5
  • 83
    • 33751234823 scopus 로고    scopus 로고
    • Common and specific properties of herpesvirus UL34/UL31 protein family members revealed by protein complementation assay
    • Schnee M., Ruzsics Z., Bubeck A., Koszinowski U.H. Common and specific properties of herpesvirus UL34/UL31 protein family members revealed by protein complementation assay. Journal of Virology 2006, 80:11658-11666.
    • (2006) Journal of Virology , vol.80 , pp. 11658-11666
    • Schnee, M.1    Ruzsics, Z.2    Bubeck, A.3    Koszinowski, U.H.4
  • 84
    • 80052441245 scopus 로고    scopus 로고
    • Argonaute-2 enhances suppression of human cytomegalovirus replication by polycistronic short hairpin RNAs targeting UL46, UL70 and UL122
    • Shao P.L., Lu M.Y., Liau Y.J., Chao M.F., Chang L.Y., Lu C.Y., Kao C.L., Chang S.Y., Chi Y.H., Huang L.M. Argonaute-2 enhances suppression of human cytomegalovirus replication by polycistronic short hairpin RNAs targeting UL46, UL70 and UL122. Antiviral Therapy 2011, 16:741-749.
    • (2011) Antiviral Therapy , vol.16 , pp. 741-749
    • Shao, P.L.1    Lu, M.Y.2    Liau, Y.J.3    Chao, M.F.4    Chang, L.Y.5    Lu, C.Y.6    Kao, C.L.7    Chang, S.Y.8    Chi, Y.H.9    Huang, L.M.10
  • 85
    • 0025988205 scopus 로고
    • Synonymous codon usage in Saccharomyces cerevisiae
    • Sharp P.M., Cowe E. Synonymous codon usage in Saccharomyces cerevisiae. Yeast 1991, 7:657-678.
    • (1991) Yeast , vol.7 , pp. 657-678
    • Sharp, P.M.1    Cowe, E.2
  • 86
    • 80655125509 scopus 로고    scopus 로고
    • Human cytomegalovirus primase UL70 specifically interacts with cellular factor Snapin
    • Shen A., Lei J., Yang E., Pei Y., Chen Y.C., Gong H., Xiao G., Liu F. Human cytomegalovirus primase UL70 specifically interacts with cellular factor Snapin. Journal of Virology 2011, 85:11732-11741.
    • (2011) Journal of Virology , vol.85 , pp. 11732-11741
    • Shen, A.1    Lei, J.2    Yang, E.3    Pei, Y.4    Chen, Y.C.5    Gong, H.6    Xiao, G.7    Liu, F.8
  • 88
    • 33646179044 scopus 로고    scopus 로고
    • Human cytomegalovirus infection elicits a glycoprotein M (gM)/gN-specific virus-neutralizing antibody response
    • Shimamura M., Mach M., Britt W.J. Human cytomegalovirus infection elicits a glycoprotein M (gM)/gN-specific virus-neutralizing antibody response. Journal of Virology 2006, 80:4591-4600.
    • (2006) Journal of Virology , vol.80 , pp. 4591-4600
    • Shimamura, M.1    Mach, M.2    Britt, W.J.3
  • 90
    • 84869013221 scopus 로고    scopus 로고
    • A mutation deleting sequences encoding the amino terminus of human cytomegalovirus UL84 impairs interaction with UL44 and capsid localization
    • Strang B.L., Bender B.J., Sharma M., Pesola J.M., Sanders R.L., Spector D.H., Coen D.M. A mutation deleting sequences encoding the amino terminus of human cytomegalovirus UL84 impairs interaction with UL44 and capsid localization. Journal of Virology 2012, 86:11066-11077.
    • (2012) Journal of Virology , vol.86 , pp. 11066-11077
    • Strang, B.L.1    Bender, B.J.2    Sharma, M.3    Pesola, J.M.4    Sanders, R.L.5    Spector, D.H.6    Coen, D.M.7
  • 91
    • 25444441055 scopus 로고    scopus 로고
    • Comparison of codon usage measures and their applicability in prediction of microbial gene expressivity
    • Supek F., Vlahovicek K. Comparison of codon usage measures and their applicability in prediction of microbial gene expressivity. BMC Bioinformatics 2005, 6:182.
    • (2005) BMC Bioinformatics , vol.6 , pp. 182
    • Supek, F.1    Vlahovicek, K.2
  • 93
    • 33750014005 scopus 로고    scopus 로고
    • Intracellular trafficking of the HCMV immunoevasin UL16 depends on elements present in both its cytoplasmic and transmembrane domains
    • Vales-Gomez M., Reyburn H.T. Intracellular trafficking of the HCMV immunoevasin UL16 depends on elements present in both its cytoplasmic and transmembrane domains. Journal of Molecular Biology 2006, 363:908-917.
    • (2006) Journal of Molecular Biology , vol.363 , pp. 908-917
    • Vales-Gomez, M.1    Reyburn, H.T.2
  • 94
    • 56449127448 scopus 로고    scopus 로고
    • Human cytomegalovirus glycoproteins gB and gH/gL mediate epithelial cell-cell fusion when expressed either in cis or in trans
    • Vanarsdall A.L., Ryckman B.J., Chase M.C., Johnson D.C. Human cytomegalovirus glycoproteins gB and gH/gL mediate epithelial cell-cell fusion when expressed either in cis or in trans. Journal of Virology 2008, 82:11837-11850.
    • (2008) Journal of Virology , vol.82 , pp. 11837-11850
    • Vanarsdall, A.L.1    Ryckman, B.J.2    Chase, M.C.3    Johnson, D.C.4
  • 97
    • 84879240179 scopus 로고    scopus 로고
    • Inhibition of human cytomegalovirus DNA replication by small interfering RNAs targeted to UL49
    • Wang K., Li Y., Zhao G., Wu Y., Zhang X., Li H., Zhou T. Inhibition of human cytomegalovirus DNA replication by small interfering RNAs targeted to UL49. Acta Biochimica et Biophysica Sinica 2013, 45:401-407.
    • (2013) Acta Biochimica et Biophysica Sinica , vol.45 , pp. 401-407
    • Wang, K.1    Li, Y.2    Zhao, G.3    Wu, Y.4    Zhang, X.5    Li, H.6    Zhou, T.7
  • 98
    • 79952167874 scopus 로고    scopus 로고
    • Human cytomegalovirus tegument protein pUL71 is required for efficient virion egress
    • Womack A., Shenk T. Human cytomegalovirus tegument protein pUL71 is required for efficient virion egress. mBio 2010, 1.
    • (2010) mBio , vol.1
    • Womack, A.1    Shenk, T.2
  • 99
    • 0031060532 scopus 로고    scopus 로고
    • Human cytomegalovirus capsid assembly protein precursor (pUL80.5) interacts with itself and with the major capsid protein (pUL86) through two different domains
    • Wood L.J., Baxter M.K., Plafker S.M., Gibson W. Human cytomegalovirus capsid assembly protein precursor (pUL80.5) interacts with itself and with the major capsid protein (pUL86) through two different domains. Journal of Virology 1997, 71:179-190.
    • (1997) Journal of Virology , vol.71 , pp. 179-190
    • Wood, L.J.1    Baxter, M.K.2    Plafker, S.M.3    Gibson, W.4
  • 100
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • Wright F. The 'effective number of codons' used in a gene. Gene 1990, 87:23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 101
    • 41549108815 scopus 로고    scopus 로고
    • Cytomegalovirus immediate early gene UL37 encodes a novel MHC-like protein
    • Wyrwicz L.S., Rychlewski L. Cytomegalovirus immediate early gene UL37 encodes a novel MHC-like protein. Acta Biochimica Polonica 2008, 55:67-73.
    • (2008) Acta Biochimica Polonica , vol.55 , pp. 67-73
    • Wyrwicz, L.S.1    Rychlewski, L.2
  • 102
    • 84861318527 scopus 로고    scopus 로고
    • RNA interference-mediated targeting of human cytomegalovirus immediate-early or early gene products inhibits viral replication with differential effects on cellular functions
    • Xiaofei E., Stadler B.M., Debatis M., Wang S., Lu S., Kowalik T.F. RNA interference-mediated targeting of human cytomegalovirus immediate-early or early gene products inhibits viral replication with differential effects on cellular functions. Journal of Virology 2012, 86:5660-5673.
    • (2012) Journal of Virology , vol.86 , pp. 5660-5673
    • Xiaofei, E.1    Stadler, B.M.2    Debatis, M.3    Wang, S.4    Lu, S.5    Kowalik, T.F.6
  • 103
    • 79952243214 scopus 로고    scopus 로고
    • Protective immunity against Chlamydia trachomatis genital infection induced by a vaccine based on the major outer membrane multi-epitope human papillomavirus major capsid protein L1
    • Xu W., Liu J., Gong W., Chen J., Zhu S., Zhang L. Protective immunity against Chlamydia trachomatis genital infection induced by a vaccine based on the major outer membrane multi-epitope human papillomavirus major capsid protein L1. Vaccine 2011, 29:2672-2678.
    • (2011) Vaccine , vol.29 , pp. 2672-2678
    • Xu, W.1    Liu, J.2    Gong, W.3    Chen, J.4    Zhu, S.5    Zhang, L.6
  • 104
    • 84897694962 scopus 로고    scopus 로고
    • Comparative genome analysis of six malarial parasites using codon usage bias based tools
    • Yadav M.K., Swati D. Comparative genome analysis of six malarial parasites using codon usage bias based tools. Bioinformation 2012, 8:1230-1239.
    • (2012) Bioinformation , vol.8 , pp. 1230-1239
    • Yadav, M.K.1    Swati, D.2
  • 107
    • 80055082230 scopus 로고    scopus 로고
    • Codon usage roles in human papillomavirus
    • Zhao K.N., Chen J. Codon usage roles in human papillomavirus. Reviews in Medical Virology 2011, 21:397-411.
    • (2011) Reviews in Medical Virology , vol.21 , pp. 397-411
    • Zhao, K.N.1    Chen, J.2
  • 108
    • 0345490760 scopus 로고    scopus 로고
    • Codon usage bias and A+T content variation in human papillomavirus genomes
    • Zhao K.N., Liu W.J., Frazer I.H. Codon usage bias and A+T content variation in human papillomavirus genomes. Virus Research 2003, 98:95-104.
    • (2003) Virus Research , vol.98 , pp. 95-104
    • Zhao, K.N.1    Liu, W.J.2    Frazer, I.H.3


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