-
1
-
-
0034570889
-
Intrinsic protein disorder in complete genomes
-
Dunker AK, Obradovic Z, Romero P, Garner EC, Brown CJ (2000) Intrinsic protein disorder in complete genomes. Genome Inf Ser Workshop Genome Inf 11:161-171
-
(2000)
Genome Inf Ser Workshop Genome Inf
, vol.11
, pp. 161-171
-
-
Dunker, A.K.1
Obradovic, Z.2
Romero, P.3
Garner, E.C.4
Brown, C.J.5
-
2
-
-
77949916296
-
Understanding protein non-folding
-
Uversky VN, Dunker AK (2010) Understanding protein non-folding. Biochim Biophys Acta 1804(6):1231-1264
-
(2010)
Biochim Biophys Acta
, vol.1804
, Issue.6
, pp. 1231-1264
-
-
Uversky, V.N.1
Dunker, A.K.2
-
3
-
-
1542358787
-
Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life
-
DOI 10.1016/j.jmb.2004.02.002, PII S0022283604001482
-
Ward JJ, Sodhi JS, McGuffin LJ, Buxton BF, Jones DT (2004) Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J Mol Biol 337(3):635-645 (Pubitemid 38326883)
-
(2004)
Journal of Molecular Biology
, vol.337
, Issue.3
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
4
-
-
0034669882
-
Why are "natively unfolded" proteins unstructured under physiologic conditions?
-
Uversky VN, Gillespie JR, Fink AL (2000) Why are "natively unfolded" proteins unstructured under physiologic conditions? Proteins 41(3):415-427
-
(2000)
Proteins
, vol.41
, Issue.3
, pp. 415-427
-
-
Uversky, V.N.1
Gillespie, J.R.2
Fink, A.L.3
-
5
-
-
84859701551
-
Orderly order in protein intrinsic disorder distribution: Disorder in 3500 proteomes from viruses and the three domains of life
-
Xue B, Dunker AK, Uversky VN (2012) Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life. J Biomol Struct Dyn 30(2):137-149
-
(2012)
J Biomol Struct Dyn
, vol.30
, Issue.2
, pp. 137-149
-
-
Xue, B.1
Dunker, A.K.2
Uversky, V.N.3
-
6
-
-
0031616362
-
Protein disorder and the evolution of molecular recognition: Theory, predictions and observations
-
Dunker AK, Garner E, Guilliot S, Romero P, Albrecht K, Hart J, Obradovic Z, Kissinger C, Villafranca JE (1998) Protein disorder and the evolution of molecular recognition: theory, predictions and observations. Pac Symp Biocomput 3:473-484
-
(1998)
Pac Symp Biocomput
, vol.3
, pp. 473-484
-
-
Dunker, A.K.1
Garner, E.2
Guilliot, S.3
Romero, P.4
Albrecht, K.5
Hart, J.6
Obradovic, Z.7
Kissinger, C.8
Villafranca, J.E.9
-
7
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
DOI 10.1006/jmbi.1999.3110
-
Wright PE, Dyson HJ (1999) Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm. J Mol Biol 293(2):321-331 (Pubitemid 29516173)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.2
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
8
-
-
0035022941
-
Intrinsically disordered protein
-
DOI 10.1016/S1093-3263(00)00138-8, PII S1093326300001388
-
Dunker AK, Lawson JD, Brown CJ, Williams RM, Romero P, Oh JS, Oldfield CJ, Campen AM, Ratliff CM, Hipps KW, Ausio J, Nissen MS, Reeves R, Kang C, Kissinger CR, Bailey RW, Griswold MD, Chiu W, Garner EC, Obradovic Z (2001) Intrinsically disordered protein. J Mol Graph Model 19(1):26-59 (Pubitemid 32411501)
-
(2001)
Journal of Molecular Graphics and Modelling
, vol.19
, Issue.1
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
Ausio, J.11
Nissen, M.S.12
Reeves, R.13
Kang, C.14
Kissinger, C.R.15
Bailey, R.W.16
Griswold, M.D.17
Chiu, W.18
Garner, E.C.19
Obradovic, Z.20
more..
-
9
-
-
0036803243
-
Intrinsically unstructured proteins
-
Tompa P (2002) Intrinsically unstructured proteins. Trends Biochem Sci 27(10):527-533
-
(2002)
Trends Biochem Sci
, vol.27
, Issue.10
, pp. 527-533
-
-
Tompa, P.1
-
10
-
-
24944511034
-
Natively disordered proteins
-
Buchner J, Kiefhaber T (eds) Wiley-VCH Verlag, GmbH & Co. KGaA, Weinheim
-
Daughdrill GW, Pielak GJ, Uversky VN, Cortese MS, Dunker AK (2005) Natively disordered proteins. In: Buchner J, Kiefhaber T (eds) Handbook of protein folding. Wiley-VCH Verlag, GmbH & Co. KGaA, Weinheim, pp 271-353
-
(2005)
Handbook of Protein Folding
, pp. 271-353
-
-
Daughdrill, G.W.1
Pielak, G.J.2
Uversky, V.N.3
Cortese, M.S.4
Dunker, A.K.5
-
11
-
-
77949328500
-
The mysterious unfoldome: Structureless, underappreciated, yet vital part of any given proteome
-
Uversky VN (2010) The mysterious unfoldome: structureless, underappreciated, yet vital part of any given proteome. J Biomed Biotechnol 2010:568068
-
(2010)
J Biomed Biotechnol
, vol.2010
, pp. 568068
-
-
Uversky, V.N.1
-
12
-
-
0036408751
-
Intrinsic disorder in cell-signaling and cancer-associated proteins
-
DOI 10.1016/S0022-2836(02)00969-5
-
Iakoucheva LM, Brown CJ, Lawson JD, Obradovic Z, Dunker AK (2002) Intrinsic disorder in cell-signaling and cancer-associated proteins. J Mol Biol 323(3):573-584 (Pubitemid 35283681)
-
(2002)
Journal of Molecular Biology
, vol.323
, Issue.3
, pp. 573-584
-
-
Iakoucheva, L.M.1
Brown, C.J.2
Lawson, J.D.3
Obradovic, Z.4
Dunker, A.K.5
-
13
-
-
27144464910
-
Flexible nets: The roles of intrinsic disorder in protein interaction networks
-
DOI 10.1111/j.1742-4658.2005.04948.x
-
Dunker AK, Cortese MS, Romero P, Iakoucheva LM, Uversky VN (2005) Flexible nets: the roles of intrinsic disorder in protein interaction networks. FEBS J 272(20):5129-5148 (Pubitemid 41503146)
-
(2005)
FEBS Journal
, vol.272
, Issue.20
, pp. 5129-5148
-
-
Dunker, A.K.1
Cortese, M.S.2
Romero, P.3
Iakoucheva, L.M.4
Uversky, V.N.5
-
14
-
-
25144472591
-
Showing your ID: Intrinsic disorder as an ID for recognition, regulation and cell signaling
-
DOI 10.1002/jmr.747
-
Uversky VN, Oldfield CJ, Dunker AK (2005) Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling. J Mol Recognit 18(5):343-384 (Pubitemid 41341287)
-
(2005)
Journal of Molecular Recognition
, vol.18
, Issue.5
, pp. 343-384
-
-
Uversky, V.N.1
Oldfield, C.J.2
Dunker, A.K.3
-
15
-
-
33847795359
-
Intrinsic disorder and functional proteomics
-
DOI 10.1529/biophysj.106.094045
-
Radivojac P, Iakoucheva LM, Oldfield CJ, Obradovic Z, Uversky VN, Dunker AK (2007) Intrinsic disorder and functional proteomics. Biophys J 92(5):1439-1456 (Pubitemid 46393458)
-
(2007)
Biophysical Journal
, vol.92
, Issue.5
, pp. 1439-1456
-
-
Radivojac, P.1
Iakoucheva, L.M.2
Oldfield, C.J.3
Obradovic, Z.4
Uversky, V.N.5
Dunker, A.K.6
-
16
-
-
34249282661
-
Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions
-
DOI 10.1021/pr060393m
-
Vucetic S, Xie H, Iakoucheva LM, Oldfield CJ, Dunker AK, Obradovic Z, Uversky VN (2007) Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions. J Proteome Res 6(5):1899-1916 (Pubitemid 46814513)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.5
, pp. 1899-1916
-
-
Vucetic, S.1
Xie, H.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Obradovic, Z.6
Uversky, V.N.7
-
17
-
-
33847768609
-
Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions
-
DOI 10.1021/pr060392u
-
Xie H, Vucetic S, Iakoucheva LM, Oldfield CJ, Dunker AK, Uversky VN, Obradovic Z (2007) Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions. J Proteome Res 6(5):1882-1898 (Pubitemid 46814512)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.5
, pp. 1882-1898
-
-
Xie, H.1
Vucetic, S.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Uversky, V.N.6
Obradovic, Z.7
-
18
-
-
33847783298
-
Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins
-
DOI 10.1021/pr060394e
-
Xie H, Vucetic S, Iakoucheva LM, Oldfield CJ, Dunker AK, Obradovic Z, Uversky VN (2007) Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins. J Proteome Res 6(5):1917-1932 (Pubitemid 46814514)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.5
, pp. 1917-1932
-
-
Xie, H.1
Vucetic, S.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Obradovic, Z.6
Uversky, V.N.7
-
19
-
-
0037188377
-
Intrinsic disorder and protein function
-
DOI 10.1021/bi012159+
-
Dunker AK, Brown CJ, Lawson JD, Iakoucheva LM, Obradovic Z (2002) Intrinsic disorder and protein function. Biochemistry 41(21):6573-6582 (Pubitemid 34547347)
-
(2002)
Biochemistry
, vol.41
, Issue.21
, pp. 6573-6582
-
-
Dunker, A.K.1
Brown, C.J.2
Lawson, J.D.3
Iakoucheva, L.M.4
Obradovic, Z.5
-
20
-
-
33744961763
-
Intrinsic disorder in transcription factors
-
DOI 10.1021/bi0602718
-
Liu J, Perumal NB, Oldfield CJ, Su EW, Uversky VN, Dunker AK (2006) Intrinsic disorder in transcription factors. Biochemistry 45(22):6873-6888 (Pubitemid 43856673)
-
(2006)
Biochemistry
, vol.45
, Issue.22
, pp. 6873-6888
-
-
Liu, J.1
Perumal, N.B.2
Oldfield, C.J.3
Su, E.W.4
Uversky, V.N.5
Dunker, A.K.6
-
21
-
-
33746310103
-
Local flexibility in molecular function paradigm
-
DOI 10.1074/mcp.M500315-MCP200
-
Bhalla J, Storchan GB, MacCarthy CM, Uversky VN, Tcherkasskaya O (2006) Local flexibility in molecular function paradigm. Mol Cell Proteomics 5(7):1212-1223 (Pubitemid 44103393)
-
(2006)
Molecular and Cellular Proteomics
, vol.5
, Issue.7
, pp. 1212-1223
-
-
Bhalla, J.1
Storchan, G.B.2
MacCarthy, C.M.3
Uversky, V.N.4
Tcherkasskaya, O.5
-
22
-
-
33744829805
-
Human Transcription Factors Contain a High Fraction of Intrinsically Disordered Regions Essential for Transcriptional Regulation
-
DOI 10.1016/j.jmb.2006.04.016, PII S0022283606004669
-
Minezaki Y, Homma K, Kinjo AR, Nishikawa K (2006) Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation. J Mol Biol 359(4):1137-1149 (Pubitemid 43831930)
-
(2006)
Journal of Molecular Biology
, vol.359
, Issue.4
, pp. 1137-1149
-
-
Minezaki, Y.1
Homma, K.2
Kinjo, A.R.3
Nishikawa, K.4
-
23
-
-
84861969926
-
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins
-
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW (2012) Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 149(6):1393-1406
-
(2012)
Cell
, vol.149
, Issue.6
, pp. 1393-1406
-
-
Castello, A.1
Fischer, B.2
Eichelbaum, K.3
Horos, R.4
Beckmann, B.M.5
Strein, C.6
Davey, N.E.7
Humphreys, D.T.8
Preiss, T.9
Steinmetz, L.M.10
Krijgsveld, J.11
Hentze, M.W.12
-
24
-
-
79952182929
-
An intrinsically disordered C terminus allows the la protein to assist the biogenesis of diverse noncoding RNA precursors
-
Kucera NJ, Hodsdon ME, Wolin SL (2011) An intrinsically disordered C terminus allows the La protein to assist the biogenesis of diverse noncoding RNA precursors. Proc Natl Acad Sci USA 108(4):1308-1313
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, Issue.4
, pp. 1308-1313
-
-
Kucera, N.J.1
Hodsdon, M.E.2
Wolin, S.L.3
-
25
-
-
3442902456
-
The role of structural disorder in the function of RNA and protein chaperones
-
DOI 10.1096/fj.04-1584rev
-
Tompa P, Csermely P (2004) The role of structural disorder in the function of RNA and protein chaperones. FASEB J 18(11):1169-1175 (Pubitemid 39006878)
-
(2004)
FASEB Journal
, vol.18
, Issue.11
, pp. 1169-1175
-
-
Tompa, P.1
Csermely, P.2
-
26
-
-
39449097872
-
RNA chaperoning and intrinsic disorder in the core proteins of Flaviviridae
-
DOI 10.1093/nar/gkm1051
-
Ivanyi-Nagy R, Lavergne JP, Gabus C, Ficheux D, Darlix JL (2008) RNA chaperoning and intrinsic disorder in the core proteins of Flaviviridae. Nucleic Acids Res 36(3):712-725 (Pubitemid 351267229)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.3
, pp. 712-725
-
-
Ivanyi-Nagy, R.1
Lavergne, J.-P.2
Gabus, C.3
Ficheux, D.4
Darlix, J.-L.5
-
27
-
-
31044439245
-
The bunyavirus nucleocapsid protein is an RNA chaperone: Possible roles in viral RNA panhandle formation and genome replication
-
DOI 10.1261/rna.2101906
-
Mir MA, Panganiban AT (2006) The bunyavirus nucleocapsid protein is an RNA chaperone: possible roles in viral RNA panhandle formation and genome replication. RNA 12(2):272-282 (Pubitemid 43121932)
-
(2006)
RNA
, vol.12
, Issue.2
, pp. 272-282
-
-
Ayoub, M.M.1
Panganiban, A.T.2
-
28
-
-
33745257290
-
Characterization of the RNA chaperone activity of hantavirus nucleocapsid protein
-
DOI 10.1128/JVI.00147-06
-
Mir MA, Panganiban AT (2006) Characterization of the RNA chaperone activity of hantavirus nucleocapsid protein. J Virol 80(13):6276-6285 (Pubitemid 43927430)
-
(2006)
Journal of Virology
, vol.80
, Issue.13
, pp. 6276-6285
-
-
Mir, M.A.1
Panganiban, A.T.2
-
29
-
-
38349088979
-
Bovine viral diarrhea virus core is an intrinsically disordered protein that binds RNA
-
Murray CL, Marcotrigiano J, Rice CM (2008) Bovine viral diarrhea virus core is an intrinsically disordered protein that binds RNA. J Virol 82(3):1294-1304
-
(2008)
J Virol
, vol.82
, Issue.3
, pp. 1294-1304
-
-
Murray, C.L.1
Marcotrigiano, J.2
Rice, C.M.3
-
30
-
-
31544433157
-
Serine/arginine-rich splicing factors belong to a class of intrinsically disordered proteins
-
DOI 10.1093/nar/gkj424
-
Haynes C, Iakoucheva LM (2006) Serine/arginine-rich splicing factors belong to a class of intrinsically disordered proteins. Nucleic Acids Res 34(1):305-312 (Pubitemid 43160053)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.1
, pp. 305-312
-
-
Haynes, C.1
Iakoucheva, L.M.2
-
31
-
-
77958071499
-
Intrinsic disorder and function of the HIV-1 Tat protein
-
Shojania S, O'Neil JD (2011) Intrinsic disorder and function of the HIV-1 Tat protein. Protein Pept Lett 17(8):999-1011
-
(2011)
Protein Pept Lett
, vol.17
, Issue.8
, pp. 999-1011
-
-
Shojania, S.1
O'Neil, J.D.2
-
32
-
-
84860843718
-
Protein intrinsic disorder as a flexible armor and a weapon of HIV-1
-
Xue B, Mizianty MJ, Kurgan L, Uversky VN (2012) Protein intrinsic disorder as a flexible armor and a weapon of HIV-1. Cell Mol Life Sci 69(8):1211-1259
-
(2012)
Cell Mol Life Sci
, vol.69
, Issue.8
, pp. 1211-1259
-
-
Xue, B.1
Mizianty, M.J.2
Kurgan, L.3
Uversky, V.N.4
-
33
-
-
31544478849
-
Modular organization of SARS coronavirus nucleocapsid protein
-
DOI 10.1007/s11373-005-9035-9
-
Chang CK, Sue SC, Yu TH, Hsieh CM, Tsai CK, Chiang YC, Lee SJ, Hsiao H, Wu WJ, Chang WL, Lin CH, Huang TH (2006) Modular organization of SARS coronavirus nucleocapsid protein. J Biomed Sci 13(1):59-72 (Pubitemid 43162506)
-
(2006)
Journal of Biomedical Science
, vol.13
, Issue.1
, pp. 59-72
-
-
Chang, C.-K.1
Sue, S.-C.2
Yu, T.-H.3
Hsieh, C.-M.4
Tsai, C.-K.5
Chiang, Y.-C.6
Lee, S.-J.7
Hsiao, H.-H.8
Wu, W.-J.9
Chang, W.-L.10
Lin, C.-H.11
Huang, T.-H.12
-
34
-
-
3242685090
-
The N-terminal domain of the Drosophila histone mRNA binding protein, SLBP, is intrinsically disordered with nascent helical structure
-
DOI 10.1021/bi036314r
-
Thapar R, Mueller GA, Marzluff WF (2004) The N-terminal domain of the Drosophila histone mRNA binding protein, SLBP, is intrinsically disordered with nascent helical structure. Biochemistry 43(29):9390-9400 (Pubitemid 38955472)
-
(2004)
Biochemistry
, vol.43
, Issue.29
, pp. 9390-9400
-
-
Thapar, R.1
Mueller, G.A.2
Marzluff, W.F.3
-
35
-
-
67649447347
-
SECIS-binding protein 2, a key player in selenoprotein synthesis, is an intrinsically disordered protein
-
Olieric V, Wolff P, Takeuchi A, Bec G, Birck C, Vitorino M, Kieffer B, Beniaminov A, Cavigiolio G, Theil E, Allmang C, Krol A, Dumas P (2009) SECIS-binding protein 2, a key player in selenoprotein synthesis, is an intrinsically disordered protein. Biochimie 91(8):1003-1009
-
(2009)
Biochimie
, vol.91
, Issue.8
, pp. 1003-1009
-
-
Olieric, V.1
Wolff, P.2
Takeuchi, A.3
Bec, G.4
Birck, C.5
Vitorino, M.6
Kieffer, B.7
Beniaminov, A.8
Cavigiolio, G.9
Theil, E.10
Allmang, C.11
Krol, A.12
Dumas, P.13
-
36
-
-
70350654363
-
What recent ribosome structures have revealed about the mechanism of translation
-
Schmeing TM, Ramakrishnan V (2009) What recent ribosome structures have revealed about the mechanism of translation. Nature 461(7268):1234-1242
-
(2009)
Nature
, vol.461
, Issue.7268
, pp. 1234-1242
-
-
Schmeing, T.M.1
Ramakrishnan, V.2
-
37
-
-
75149196287
-
The mechanism of eukaryotic translation initiation and principles of its regulation
-
Jackson RJ, Hellen CU, Pestova TV (2010) The mechanism of eukaryotic translation initiation and principles of its regulation. Nat Rev Mol Cell Biol 11(2):113-127
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, Issue.2
, pp. 113-127
-
-
Jackson, R.J.1
Hellen, C.U.2
Pestova, T.V.3
-
38
-
-
60149091189
-
Regulation of translation initiation in eukaryotes: Mechanisms and biological targets
-
Sonenberg N, Hinnebusch AG (2009) Regulation of translation initiation in eukaryotes: mechanisms and biological targets. Cell 136(4):731-745
-
(2009)
Cell
, vol.136
, Issue.4
, pp. 731-745
-
-
Sonenberg, N.1
Hinnebusch, A.G.2
-
39
-
-
0035798380
-
Structure of the 80S ribosome from Saccharomyces cerevisiae - tRNA-ribosome and subunit-subunit interactions
-
DOI 10.1016/S0092-8674(01)00539-6
-
Spahn CM, Beckmann R, Eswar N, Penczek PA, Sali A, Blobel G, Frank J (2001) Structure of the 80S ribosome from Saccharomyces cerevisiae - tRNA-ribosome and subunit-subunit interactions. Cell 107(3):373-386 (Pubitemid 33049980)
-
(2001)
Cell
, vol.107
, Issue.3
, pp. 373-386
-
-
Spahn, C.M.T.1
Beckmann, R.2
Eswar, N.3
Penczek, P.A.4
Sali, A.5
Blobel, G.6
Frank, J.7
-
40
-
-
81555219350
-
Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6
-
Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science 334(6058):941-948
-
(2011)
Science
, vol.334
, Issue.6058
, pp. 941-948
-
-
Klinge, S.1
Voigts-Hoffmann, F.2
Leibundgut, M.3
Arpagaus, S.4
Ban, N.5
-
41
-
-
0037115872
-
Comparative analysis of ribosomal proteins in complete genomes: An example of reductive evolution at the domain scale
-
DOI 10.1093/nar/gkf693
-
Lecompte O, Ripp R, Thierry JC, Moras D, Poch O (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-5390 (Pubitemid 36113915)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.24
, pp. 5382-5390
-
-
Lecompte, O.1
Ripp, R.2
Thierry, J.-C.3
Moras, D.4
Poch, O.5
-
42
-
-
0028251157
-
Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli
-
Zengel JM, Lindahl L (1994) Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli. Prog Nucleic Acid Res Mol Biol 47:331-370
-
(1994)
Prog Nucleic Acid Res Mol Biol
, vol.47
, pp. 331-370
-
-
Zengel, J.M.1
Lindahl, L.2
-
43
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution
-
DOI 10.1126/science.289.5481.905
-
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA (2000) The complete atomic structure of the large ribosomal subunit at 2.4 A resolution. Science 289(5481):905-920 (Pubitemid 30659939)
-
(2000)
Science
, vol.289
, Issue.5481
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
44
-
-
0034699518
-
Structure of the 30S ribosomal subunit
-
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V (2000) Structure of the 30S ribosomal subunit. Nature 407(6802):327-339
-
(2000)
Nature
, vol.407
, Issue.6802
, pp. 327-339
-
-
Wimberly, B.T.1
Brodersen, D.E.2
Clemons Jr., W.M.3
Morgan-Warren, R.J.4
Carter, A.P.5
Vonrhein, C.6
Hartsch, T.7
Ramakrishnan, V.8
-
45
-
-
0035805213
-
Crystal structure of the ribosome at 5.5 A resolution
-
DOI 10.1126/science.1060089
-
Yusupov MM, Yusupova GZ, Baucom A, Lieberman K, Earnest TN, Cate JH, Noller HF (2001) Crystal structure of the ribosome at 5.5 A resolution. Science 292(5518):883-896 (Pubitemid 32422479)
-
(2001)
Science
, vol.292
, Issue.5518
, pp. 883-896
-
-
Yusupov, M.M.1
Yusupova, G.Zh.2
Baucom, A.3
Lieberman, K.4
Earnest, T.N.5
Cate, J.H.D.6
Noller, H.F.7
-
46
-
-
0035977093
-
High resolution structure of the large ribosomal subunit from a mesophilic eubacterium
-
DOI 10.1016/S0092-8674(01)00546-3
-
Harms J, Schluenzen F, Zarivach R, Bashan A, Gat S, Agmon I, Bartels H, Franceschi F, Yonath A (2001) High resolution structure of the large ribosomal subunit from a mesophilic eubacterium. Cell 107(5):679-688 (Pubitemid 34014868)
-
(2001)
Cell
, vol.107
, Issue.5
, pp. 679-688
-
-
Harms, J.1
Schluenzen, F.2
Zarivach, R.3
Bashan, A.4
Gat, S.5
Agmon, I.6
Bartels, H.7
Franceschi, F.8
Yonath, A.9
-
47
-
-
27644491082
-
Structures of the bacterial ribosome at 3.5 A resolution
-
DOI 10.1126/science.1117230
-
Schuwirth BS, Borovinskaya MA, Hau CW, Zhang W, Vila-Sanjurjo A, Holton JM, Cate JH (2005) Structures of the bacterial ribosome at 3.5 A resolution. Science 310(5749):827-834 (Pubitemid 41567336)
-
(2005)
Science
, vol.310
, Issue.5749
, pp. 827-834
-
-
Schuwirth, B.S.1
Borovinskaya, M.A.2
Hau, C.W.3
Zhang, W.4
Vila-Sanjurjo, A.5
Holton, J.M.6
Cate, J.H.D.7
-
48
-
-
33749354360
-
Structure of the 70S ribosome complexed with mRNA and tRNA
-
DOI 10.1126/science.1131127
-
Selmer M, Dunham CM, Murphy FVt, Weixlbaumer A, Petry S, Kelley AC, Weir JR, Ramakrishnan V (2006) Structure of the 70S ribosome complexed with mRNA and tRNA. Science 313(5795):1935-1942 (Pubitemid 44497996)
-
(2006)
Science
, vol.313
, Issue.5795
, pp. 1935-1942
-
-
Selmer, M.1
Dunham, C.M.2
Murphy IV, F.V.3
Weixlbaumer, A.4
Petry, S.5
Kelley, A.C.6
Weir, J.R.7
Ramakrishnan, V.8
-
49
-
-
63549150458
-
The role of disordered ribosomal protein extensions in the early steps of eubacterial 50 S ribosomal subunit assembly
-
Timsit Y, Acosta Z, Allemand F, Chiaruttini C, Springer M (2009) The role of disordered ribosomal protein extensions in the early steps of eubacterial 50 S ribosomal subunit assembly. Int J Mol Sci 10(3):817-834
-
(2009)
Int J Mol Sci
, vol.10
, Issue.3
, pp. 817-834
-
-
Timsit, Y.1
Acosta, Z.2
Allemand, F.3
Chiaruttini, C.4
Springer, M.5
-
50
-
-
78649426085
-
Crystal structure of the eukaryotic ribosome
-
Ben-Shem A, Jenner L, Yusupova G, Yusupov M (2011) Crystal structure of the eukaryotic ribosome. Science 330(6008):1203-1209
-
(2011)
Science
, vol.330
, Issue.6008
, pp. 1203-1209
-
-
Ben-Shem, A.1
Jenner, L.2
Yusupova, G.3
Yusupov, M.4
-
51
-
-
0021009482
-
Structure and role of eubacterial ribosomal proteins
-
Garrett RA (1983) Structure and role of eubacterial ribosomal proteins. Horiz Biochem Biophys 7:101-138
-
(1983)
Horiz Biochem Biophys
, vol.7
, pp. 101-138
-
-
Garrett, R.A.1
-
52
-
-
0036303417
-
Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: Structure of the proteins and their interactions with 16 S RNA
-
DOI 10.1006/jmbi.2001.5359
-
Brodersen DE, Clemons WM Jr, Carter AP, Wimberly BT, Ramakrishnan V (2002) Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 S RNA. J Mol Biol 316(3):725-768 (Pubitemid 34729252)
-
(2002)
Journal of Molecular Biology
, vol.316
, Issue.3
, pp. 725-768
-
-
Brodersen, D.E.1
Clemons Jr., W.M.2
Carter, A.P.3
Wimberly, B.T.4
Ramakrishnan, V.5
-
53
-
-
2942615089
-
The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit
-
DOI 10.1016/j.jmb.2004.03.076, PII S0022283604003845
-
Klein DJ, Moore PB, Steitz TA (2004) The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit. J Mol Biol 340(1):141-177 (Pubitemid 38739442)
-
(2004)
Journal of Molecular Biology
, vol.340
, Issue.1
, pp. 141-177
-
-
Klein, D.J.1
Moore, P.B.2
Steitz, T.A.3
-
54
-
-
0347125312
-
RPG: The Ribosomal Protein Gene database
-
Nakao A, Yoshihama M, Kenmochi N (2004) RPG: the Ribosomal Protein Gene database. Nucleic Acids Res 32(Database issue):D168-D170 (Pubitemid 38081631)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.DATABASE ISS.
-
-
Nakao, A.1
Yoshihama, M.2
Kenmochi, N.3
-
55
-
-
77956502766
-
Improved sequence-based prediction of disordered regions with multilayer fusion of multiple information sources
-
Mizianty MJ, Stach W, Chen K, Kedarisetti KD, Disfani FM, Kurgan L (2010) Improved sequence-based prediction of disordered regions with multilayer fusion of multiple information sources. Bioinformatics 26(18):i489-i496
-
(2010)
Bioinformatics
, vol.26
, Issue.18
-
-
Mizianty, M.J.1
Stach, W.2
Chen, K.3
Kedarisetti, K.D.4
Disfani, F.M.5
Kurgan, L.6
-
56
-
-
84860833500
-
Reorganizing the protein space at the Universal Protein Resource (UniProt)
-
UniProt Consortium
-
UniProt Consortium (2012) Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res 40(Database issue):D71-D75
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.DATABASE ISSUE
-
-
-
57
-
-
83855162728
-
The structure of the eukaryotic ribosome at 3.0 A resolution
-
Ben-Shem A, Garreau de Loubresse N, Melnikov S, Jenner L, Yusupova G, Yusupov M (2011) The structure of the eukaryotic ribosome at 3.0 A resolution. Science 334(6062):1524-1529
-
(2011)
Science
, vol.334
, Issue.6062
, pp. 1524-1529
-
-
Ben-Shem, A.1
Garreau De Loubresse, N.2
Melnikov, S.3
Jenner, L.4
Yusupova, G.5
Yusupov, M.6
-
58
-
-
84986483798
-
The double cubic lattice method - efficient approaches to numerical-integration of surface-area and volume and to dot surface contouring of molecular assemblies
-
Eisenhaber F, Lijnzaad P, Argos P, Sander C, Scharf M (1995) The double cubic lattice method - efficient approaches to numerical-integration of surface-area and volume and to dot surface contouring of molecular assemblies. J Comput Chem 16(3):273-284
-
(1995)
J Comput Chem
, vol.16
, Issue.3
, pp. 273-284
-
-
Eisenhaber, F.1
Lijnzaad, P.2
Argos, P.3
Sander, C.4
Scharf, M.5
-
59
-
-
0033665510
-
BALL - rapid software prototyping in computational molecular biology. Biochemicals algorithms library
-
Kohlbacher O, Lenhof HP (2000) BALL - rapid software prototyping in computational molecular biology. Biochemicals algorithms library. Bioinformatics 16(9):815-824
-
(2000)
Bioinformatics
, vol.16
, Issue.9
, pp. 815-824
-
-
Kohlbacher, O.1
Lenhof, H.P.2
-
60
-
-
4143107222
-
Analysis of ordered and disordered protein complexes reveals structural features discriminating between stable and unstable monomers
-
DOI 10.1016/j.jmb.2004.07.002, PII S0022283604008010
-
Gunasekaran K, Tsai CJ, Nussinov R (2004) Analysis of ordered and disordered protein complexes reveals structural features discriminating between stable and unstable monomers. J Mol Biol 341(5):1327-1341 (Pubitemid 39092318)
-
(2004)
Journal of Molecular Biology
, vol.341
, Issue.5
, pp. 1327-1341
-
-
Gunasekaran, K.1
Tsai, C.-J.2
Nussinov, R.3
-
61
-
-
0002593344
-
Multi-interval discretization of continuous-valued attributes for classification learning
-
Bajcsy R (ed) Morgan-Kaufmann, Menlo Park
-
Fayyad UM, Irani KB (1993) Multi-interval discretization of continuous-valued attributes for classification learning. In: Bajcsy R (ed) The 13th International Joint Conference on Uncertainty in Artificial Intelligence, Chambery, France, 1993. Morgan-Kaufmann, Menlo Park, pp 1022-1027
-
(1993)
The 13th International Joint Conference on Uncertainty in Artificial Intelligence, Chambery, France, 1993
, pp. 1022-1027
-
-
Fayyad, U.M.1
Irani, K.B.2
-
62
-
-
34447539760
-
Composition profiler: A tool for discovery and visualization of amino acid composition differences
-
Vacic V, Uversky VN, Dunker AK, Lonardi S (2007) Composition profiler: a tool for discovery and visualization of amino acid composition differences. BMC Bioinforma 8:211
-
(2007)
BMC Bioinforma
, vol.8
, pp. 211
-
-
Vacic, V.1
Uversky, V.N.2
Dunker, A.K.3
Lonardi, S.4
-
63
-
-
0033954256
-
The Protein Data Bank
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE (2000) The protein data bank. Nucleic Acids Res 28(1):235-242 (Pubitemid 30047768)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
64
-
-
33846099868
-
DisProt: The database of disordered proteins
-
DOI 10.1093/nar/gkl893
-
Sickmeier M, Hamilton JA, LeGall T, Vacic V, Cortese MS, Tantos A, Szabo B, Tompa P, Chen J, Uversky VN, Obradovic Z, Dunker AK (2007) DisProt: the database of disordered proteins. Nucleic Acids Res 35(Database issue):D786-D793 (Pubitemid 46056310)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Sickmeier, M.1
Hamilton, J.A.2
LeGall, T.3
Vacic, V.4
Cortese, M.S.5
Tantos, A.6
Szabo, B.7
Tompa, P.8
Chen, J.9
Uversky, V.N.10
Obradovic, Z.11
Dunker, A.K.12
-
65
-
-
0042622240
-
GlobPlot: Exploring protein sequences for globularity and disorder
-
DOI 10.1093/nar/gkg519
-
Linding R, Russell RB, Neduva V, Gibson TJ (2003) Glob-Plot: exploring protein sequences for globularity and disorder. Nucleic Acids Res 31(13):3701-3708 (Pubitemid 37442227)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3701-3708
-
-
Linding, R.1
Russell, R.B.2
Neduva, V.3
Gibson, T.J.4
-
66
-
-
84862499641
-
Prediction of protein domain with mRMR feature selection and analysis
-
Li BQ, Hu LL, Chen L, Feng KY, Cai YD, Chou KC (2012) Prediction of protein domain with mRMR feature selection and analysis. PLoS One 7(6):e39308
-
(2012)
PLoS One
, vol.7
, Issue.6
-
-
Li, B.Q.1
Hu, L.L.2
Chen, L.3
Feng, K.Y.4
Cai, Y.D.5
Chou, K.C.6
-
67
-
-
80855132586
-
Evaluation of disorder predictions in CASP9
-
Monastyrskyy B, Fidelis K, Moult J, Tramontano A, Kryshtafovych A (2011) Evaluation of disorder predictions in CASP9. Proteins 79(Suppl 10):107-118
-
(2011)
Proteins
, vol.79
, Issue.SUPPL. 10
, pp. 107-118
-
-
Monastyrskyy, B.1
Fidelis, K.2
Moult, J.3
Tramontano, A.4
Kryshtafovych, A.5
-
68
-
-
84857129811
-
Comprehensive comparative assessment of in-silico predictors of disordered regions
-
Peng ZL, Kurgan L (2012) Comprehensive comparative assessment of in-silico predictors of disordered regions. Curr Protein Pept Sci 13:6-18
-
(2012)
Curr Protein Pept Sci
, vol.13
, pp. 6-18
-
-
Peng, Z.L.1
Kurgan, L.2
-
69
-
-
65249102824
-
Close encounters of the third kind: Disordered domains and the interactions of proteins
-
Tompa P, Fuxreiter M, Oldfield CJ, Simon I, Dunker AK, Uversky VN (2009) Close encounters of the third kind: disordered domains and the interactions of proteins. Bioessays 31(3):328-335
-
(2009)
Bioessays
, vol.31
, Issue.3
, pp. 328-335
-
-
Tompa, P.1
Fuxreiter, M.2
Oldfield, C.J.3
Simon, I.4
Dunker, A.K.5
Uversky, V.N.6
-
70
-
-
74249104442
-
Assessment of disorder predictions in CASP8
-
Noivirt-Brik O, Prilusky J, Sussman JL (2009) Assessment of disorder predictions in CASP8. Proteins 77(Suppl 9):210-216
-
(2009)
Proteins
, vol.77
, Issue.SUPPL. 9
, pp. 210-216
-
-
Noivirt-Brik, O.1
Prilusky, J.2
Sussman, J.L.3
-
71
-
-
79958825533
-
In-silico prediction of disorder content using hybrid sequence representation
-
Mizianty MJ, Zhang T, Xue B, Zhou Y, Dunker AK, Uversky VN, Kurgan L (2011) In-silico prediction of disorder content using hybrid sequence representation. BMC Bioinforma 12:245
-
(2011)
BMC Bioinforma
, vol.12
, pp. 245
-
-
Mizianty, M.J.1
Zhang, T.2
Xue, B.3
Zhou, Y.4
Dunker, A.K.5
Uversky, V.N.6
Kurgan, L.7
-
72
-
-
13644257647
-
Comparing and combining predictors of mostly disordered proteins
-
DOI 10.1021/bi047993o
-
Oldfield CJ, Cheng Y, Cortese MS, Brown CJ, Uversky VN, Dunker AK (2005) Comparing and combining predictors of mostly disordered proteins. Biochemistry 44(6):1989-2000 (Pubitemid 40227474)
-
(2005)
Biochemistry
, vol.44
, Issue.6
, pp. 1989-2000
-
-
Oldfield, C.J.1
Cheng, Y.2
Cortese, M.S.3
Brown, C.J.4
Uversky, V.N.5
Bunker, A.K.6
-
73
-
-
67349162535
-
CDF it all: Consensus prediction of intrinsically disordered proteins based on various cumulative distribution functions
-
Xue B, Oldfield CJ, Dunker AK, Uversky VN (2009) CDF it all: consensus prediction of intrinsically disordered proteins based on various cumulative distribution functions. FEBS Lett 583(9):1469-1474
-
(2009)
FEBS Lett
, vol.583
, Issue.9
, pp. 1469-1474
-
-
Xue, B.1
Oldfield, C.J.2
Dunker, A.K.3
Uversky, V.N.4
-
74
-
-
41049091705
-
Intrinsic disorder in pathogenic and non-pathogenic microbes: Discovering and analyzing the unfoldomes of early-branching eukaryotes
-
DOI 10.1039/b719168e
-
Mohan A, Sullivan WJ Jr, Radivojac P, Dunker AK, Uversky VN (2008) Intrinsic disorder in pathogenic and non-pathogenic microbes: discovering and analyzing the unfoldomes of early-branching eukaryotes. Mol Biosyst 4(4):328-340 (Pubitemid 351422588)
-
(2008)
Molecular BioSystems
, vol.4
, Issue.4
, pp. 328-340
-
-
Mohan, A.1
Sullivan, J.W.J.2
Radivojac, P.3
Dunker, A.K.4
Uversky, V.N.5
-
75
-
-
84891464898
-
Subclassifying disordered proteins by the CH-CDF plot method
-
Huang F, Oldfield C, Meng J, Hsu WL, Xue B, Uversky VN, Romero P, Dunker AK (2012) Subclassifying disordered proteins by the CH-CDF plot method. Pac Symp Biocomput 17:128-139
-
(2012)
Pac Symp Biocomput
, vol.17
, pp. 128-139
-
-
Huang, F.1
Oldfield, C.2
Meng, J.3
Hsu, W.L.4
Xue, B.5
Uversky, V.N.6
Romero, P.7
Dunker, A.K.8
-
76
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith TF, Waterman MS (1981) Identification of common molecular subsequences. J Mol Biol 147(1):195-197
-
(1981)
J Mol Biol
, vol.147
, Issue.1
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
77
-
-
84863518014
-
MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins
-
Disfani FM, Hsu W-L, Mizianty MJ, Oldfield CJ, Xue B, Dunker AK, Uversky VN, Kurgan L (2012) MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins. Bioinformatics 28(12):i75-83
-
(2012)
Bioinformatics
, vol.28
, Issue.12
-
-
Disfani, F.M.1
Hsu, W.-L.2
Mizianty, M.J.3
Oldfield, C.J.4
Xue, B.5
Dunker, A.K.6
Uversky, V.N.7
Kurgan, L.8
-
78
-
-
24944546549
-
Coupled folding and binding with alpha-helix-forming molecular recognition elements
-
DOI 10.1021/bi050736e
-
Oldfield CJ, Cheng Y, Cortese MS, Romero P, Uversky VN, Dunker AK (2005) Coupled folding and binding with alpha-helix-forming molecular recognition elements. Biochemistry 44(37):12454-12470 (Pubitemid 41324337)
-
(2005)
Biochemistry
, vol.44
, Issue.37
, pp. 12454-12470
-
-
Oldfield, C.J.1
Cheng, Y.2
Cortese, M.S.3
Romero, P.4
Uversky, V.N.5
Dunker, A.K.6
-
79
-
-
34250815165
-
Characterization of molecular recognition features, MoRFs, and their binding partners
-
DOI 10.1021/pr0701411
-
Vacic V, Oldfield CJ, Mohan A, Radivojac P, Cortese MS, Uversky VN, Dunker AK (2007) Characterization of molecular recognition features, MoRFs, and their binding partners. J Proteome Res 6(6):2351-2366 (Pubitemid 46985123)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.6
, pp. 2351-2366
-
-
Vacic, V.1
Oldfield, C.J.2
Mohan, A.3
Radivojac, P.4
Cortese, M.S.5
Uversky, V.N.6
Dunker, A.K.7
-
80
-
-
33748456399
-
Analysis of Molecular Recognition Features (MoRFs)
-
DOI 10.1016/j.jmb.2006.07.087, PII S0022283606009831
-
Mohan A, Oldfield CJ, Radivojac P, Vacic V, Cortese MS, Dunker AK, Uversky VN (2006) Analysis of molecular recognition features (MoRFs). J Mol Biol 362(5):1043-1059 (Pubitemid 44353519)
-
(2006)
Journal of Molecular Biology
, vol.362
, Issue.5
, pp. 1043-1059
-
-
Mohan, A.1
Oldfield, C.J.2
Radivojac, P.3
Vacic, V.4
Cortese, M.S.5
Dunker, A.K.6
Uversky, V.N.7
-
81
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
Jones DT (1999) Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol 292(2):195-202
-
(1999)
J Mol Biol
, vol.292
, Issue.2
, pp. 195-202
-
-
Jones, D.T.1
-
82
-
-
33748505263
-
Incorporating background frequency improves entropy-based residue conservation measures
-
Wang K, Samudrala R (2006) Incorporating background frequency improves entropy-based residue conservation measures. BMC Bioinforma 7:385
-
(2006)
BMC Bioinforma
, vol.7
, pp. 385
-
-
Wang, K.1
Samudrala, R.2
-
83
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul SF, Madden TL, Schaffer A, Zhang JH, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25(17):3389-3402 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
84
-
-
0036495004
-
Getting the most from PSI-BLAST
-
DOI 10.1016/S0968-0004(01)02039-4, PII S0968000401020394
-
Jones DT, Swindells MB (2002) Getting the most from PSI-BLAST. Trends Biochem Sci 27(3):161-164 (Pubitemid 34219327)
-
(2002)
Trends in Biochemical Sciences
, vol.27
, Issue.3
, pp. 161-164
-
-
Jones, D.T.1
Swindells, M.B.2
-
85
-
-
84862169121
-
More than just tails: Intrinsic disorder in histone proteins
-
Peng Z, Mizianty MJ, Xue B, Kurgan L, Uversky VN (2012) More than just tails: intrinsic disorder in histone proteins. Mol Biosyst 8(7):1886-1901
-
(2012)
Mol Biosyst
, vol.8
, Issue.7
, pp. 1886-1901
-
-
Peng, Z.1
Mizianty, M.J.2
Xue, B.3
Kurgan, L.4
Uversky, V.N.5
-
86
-
-
84856577919
-
Prediction and analysis of nucleotide-binding residues using sequence and sequence-derived structural descriptors
-
Chen K, Mizianty MJ, Kurgan L (2012) Prediction and analysis of nucleotide-binding residues using sequence and sequence-derived structural descriptors. Bioinformatics 28(3):331-341
-
(2012)
Bioinformatics
, vol.28
, Issue.3
, pp. 331-341
-
-
Chen, K.1
Mizianty, M.J.2
Kurgan, L.3
-
87
-
-
77954686958
-
A comparative study of conservation and variation scores
-
Johansson F, Toh H (2010) A comparative study of conservation and variation scores. BMC Bioinforma 11(1):388
-
(2010)
BMC Bioinforma
, vol.11
, Issue.1
, pp. 388
-
-
Johansson, F.1
Toh, H.2
-
88
-
-
0026941784
-
Folding and assembly of oligomeric proteins in Escherichia coli
-
Teschke CM, King J (1992) Folding and assembly of oligomeric proteins in Escherichia coli. Curr Opin Biotechnol 3(5):468-473
-
(1992)
Curr Opin Biotechnol
, vol.3
, Issue.5
, pp. 468-473
-
-
Teschke, C.M.1
King, J.2
-
89
-
-
0031913197
-
Mechanism and evolution of protein dimerization
-
Xu D, Tsai CJ, Nussinov R (1998) Mechanism and evolution of protein dimerization. Protein Sci 7(3):533-544 (Pubitemid 28130874)
-
(1998)
Protein Science
, vol.7
, Issue.3
, pp. 533-544
-
-
Xu, D.1
Tsai, C.-J.2
Nussinov, R.3
-
90
-
-
4444351205
-
Yeast Asc1p and mammalian RACK1 are functionally orthologous core 40S ribosomal proteins that repress gene expression
-
DOI 10.1128/MCB.24.18.8276-8287.2004
-
Gerbasi VR, Weaver CM, Hill S, Friedman DB, Link AJ (2004) Yeast Asc1p and mammalian RACK1 are functionally orthologous core 40S ribosomal proteins that repress gene expression. Mol Cell Biol 24(18):8276-8287 (Pubitemid 39167475)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.18
, pp. 8276-8287
-
-
Gerbasi, V.R.1
Weaver, C.M.2
Hill, S.3
Friedman, D.B.4
Link, A.J.5
-
91
-
-
0017681674
-
Physical studies on the conformation of ribosomal protein S4 from Escherichia coli
-
DOI 10.1111/j.1432-1033.1977.tb11724.x
-
Morrison CA, Garrett RA, Bradbury EM (1977) Physical studies on the conformation of ribosomal protein S4 from Escherichia coli. Eur J Biochem 78(1):153-159 (Pubitemid 8164732)
-
(1977)
European Journal of Biochemistry
, vol.78
, Issue.1
, pp. 153-159
-
-
Morrison, C.A.1
Garrett, R.A.2
Bradbury, E.M.3
-
92
-
-
0004039245
-
-
Scientific Center of Biological Research of the Academy of Sciences of the USSR in Pushchino, Moscow Region, Russia
-
Venyaminov SY, Gudkov AT, Gogia ZV, Tumanova LG (1981) Absorption and circular dichroism spectra of individual proteins from Escherichia coli ribosomes. Scientific Center of Biological Research of the Academy of Sciences of the USSR in Pushchino, Moscow Region, Russia
-
(1981)
Absorption and Circular Dichroism Spectra of Individual Proteins from Escherichia Coli Ribosomes
-
-
Venyaminov, S.Y.1
Gudkov, A.T.2
Gogia, Z.V.3
Tumanova, L.G.4
-
93
-
-
0021104739
-
500-MHz 1H-NMR studies of ribosomal proteins isolated from 70-S ribosomes of Escherichia coli
-
van de Ven FJ, de Bruin SH, Hilbers CW (1983) 500-MHz 1H-NMR studies of ribosomal proteins isolated from 70-S ribosomes of Escherichia coli. Eur J Biochem 134(3):429-438
-
(1983)
Eur J Biochem
, vol.134
, Issue.3
, pp. 429-438
-
-
Van De Ven, F.J.1
De Bruin, S.H.2
Hilbers, C.W.3
-
94
-
-
0034619497
-
Structural preordering in the N-terminal region of ribosomal protein S4 revealed by heteronuclear NMR spectroscopy
-
Sayers EW, Gerstner RB, Draper DE, Torchia DA (2000) Structural preordering in the N-terminal region of ribosomal protein S4 revealed by heteronuclear NMR spectroscopy. Biochemistry 39(44):13602-13613
-
(2000)
Biochemistry
, vol.39
, Issue.44
, pp. 13602-13613
-
-
Sayers, E.W.1
Gerstner, R.B.2
Draper, D.E.3
Torchia, D.A.4
-
95
-
-
0036565779
-
The solution structure of ribosomal protein L18 from Thermus thermophilus reveals a conserved RNA-binding fold
-
DOI 10.1042/0264-6021:3630553
-
Woestenenk EA, Gongadze GM, Shcherbakov DV, Rak AV, Garber MB, Hard T, Berglund H (2002) The solution structure of ribosomal protein L18 from Thermus thermophilus reveals a conserved RNA-binding fold. Biochem J 363(Pt 3):553-561 (Pubitemid 34526376)
-
(2002)
Biochemical Journal
, vol.363
, Issue.3
, pp. 553-561
-
-
Woestenenk, E.A.1
Gongadze, G.M.2
Shcherbakov, D.V.3
Rak, A.V.4
Garber, M.B.5
Hard, T.6
Berglund, H.7
-
96
-
-
0036395006
-
NMR structure of bacterial ribosomal protein L20: Implications for ribosome assembly and translational control
-
DOI 10.1016/S0022-2836(02)00921-X
-
Raibaud S, Lebars I, Guillier M, Chiaruttini C, Bontems F, Rak A, Garber M, Allemand F, Springer M, Dardel F (2002) NMR structure of bacterial ribosomal protein l20: implications for ribosome assembly and translational control. J Mol Biol 323(1):143-151 (Pubitemid 35168487)
-
(2002)
Journal of Molecular Biology
, vol.323
, Issue.1
, pp. 143-151
-
-
Raibaud, S.1
Lebars, I.2
Guillier, M.3
Chiaruttini, C.4
Bontems, F.5
Rak, A.6
Garber, M.7
Allemand, F.8
Springer, M.9
Dardel, F.10
-
97
-
-
0038663211
-
NMR structure of the ribosomal protein L23 from Thermus thermophilus
-
DOI 10.1023/A:1023502307069
-
Ohman A, Rak A, Dontsova M, Garber MB, Hard T (2003) NMR structure of the ribosomal protein L23 from Thermus thermophilus. J Biomol NMR 26(2):131-137 (Pubitemid 36609045)
-
(2003)
Journal of Biomolecular NMR
, vol.26
, Issue.2
, pp. 131-137
-
-
Ohman, A.1
Rak, A.2
Dontsova, M.3
Garber, M.B.4
Hard, T.5
-
98
-
-
10744222677
-
Solution NMR structure of the 30S ribosomal protein S28E from Pyrococcus horikoshii
-
DOI 10.1110/ps.03359003
-
Aramini JM, Huang YJ, Cort JR, Goldsmith-Fischman S, Xiao R, Shih LY, Ho CK, Liu J, Rost B, Honig B, Kennedy MA, Acton TB, Montelione GT (2003) Solution NMR structure of the 30S ribosomal protein S28E from Pyrococcus horikoshii. Protein Sci 12(12):2823-2830 (Pubitemid 37445106)
-
(2003)
Protein Science
, vol.12
, Issue.12
, pp. 2823-2830
-
-
Aramini, J.M.1
Huang, Y.J.2
Cort, J.R.3
Goldsmith-Fischman, S.4
Xiao, R.5
Shih, L.-Y.6
Ho, C.K.7
Liu, J.8
Rost, B.9
Honig, B.10
Kennedy, M.A.11
Acton, T.B.12
Montelione, G.T.13
-
99
-
-
10744233704
-
Solution structure of ribosomal protein S28E from Methanobacterium thermoautotrophicum
-
DOI 10.1110/ps.03358203
-
Wu B, Yee A, Pineda-Lucena A, Semesi A, Ramelot TA, Cort JR, Jung JW, Edwards A, Lee W, Kennedy M, Arrowsmith CH (2003) Solution structure of ribosomal protein S28E from Methanobacterium thermoautotrophicum. Protein Sci 12(12):2831-2837 (Pubitemid 37445107)
-
(2003)
Protein Science
, vol.12
, Issue.12
, pp. 2831-2837
-
-
Wu, B.1
Yee, A.2
Pineda-Lucena, A.3
Semesi, A.4
Ramelot, T.A.5
Cort, J.R.6
Jung, J.-W.7
Edwards, A.8
Lee, W.9
Kennedy, M.10
Arrowsmith, C.H.11
-
100
-
-
1542501914
-
The solution structure of ribosomal protein L18 from Bacillus stearothermophilus
-
DOI 10.1016/j.jmb.2003.11.018, PII S0022283603014153
-
Turner CF, Moore PB (2004) The solution structure of ribosomal protein L18 from Bacillus stearothermophilus. J Mol Biol 335(3):679-684 (Pubitemid 38352811)
-
(2004)
Journal of Molecular Biology
, vol.335
, Issue.3
, pp. 679-684
-
-
Turner, C.F.1
Moore, P.B.2
-
101
-
-
9244241530
-
Solution structure of ribosomal protein L16 from Thermus thermophilus HB8
-
DOI 10.1016/j.jmb.2004.10.011, PII S0022283604013038
-
Nishimura M, Yoshida T, Shirouzu M, Terada T, Kuramitsu S, Yokoyama S, Ohkubo T, Kobayashi Y (2004) Solution structure of ribosomal protein L16 from Thermus thermophilus HB8. J Mol Biol 344(5):1369-1383 (Pubitemid 39550481)
-
(2004)
Journal of Molecular Biology
, vol.344
, Issue.5
, pp. 1369-1383
-
-
Nishimura, M.1
Yoshida, T.2
Shirouzu, M.3
Terada, T.4
Kuramitsu, S.5
Yokoyama, S.6
Ohkubo, T.7
Kobayashi, Y.8
-
102
-
-
33748449858
-
Solution structure of TA1092, a ribosomal protein S24e from Thermoplasma acidophilum
-
DOI 10.1002/prot.21045
-
Jeon BY, Jung J, Kim DW, Yee A, Arrowsmith CH, Lee W (2006) Solution structure of TA1092, a ribosomal protein S24e from Thermoplasma acidophilum. Proteins 64(4):1095-1097 (Pubitemid 44420948)
-
(2006)
Proteins: Structure, Function and Genetics
, vol.64
, Issue.4
, pp. 1095-1097
-
-
Jeon, B.-Y.1
Jung, J.2
Kim, D.-W.3
Yee, A.4
Arrowsmith, C.H.5
Lee, W.6
-
103
-
-
67649185437
-
Structure, stability, and flexibility of ribosomal protein L14e from Sulfolobus solfataricus
-
Edmondson SP, Turri J, Smith K, Clark A, Shriver JW (2009) Structure, stability, and flexibility of ribosomal protein L14e from Sulfolobus solfataricus. Biochemistry 48(24):5553-5562
-
(2009)
Biochemistry
, vol.48
, Issue.24
, pp. 5553-5562
-
-
Edmondson, S.P.1
Turri, J.2
Smith, K.3
Clark, A.4
Shriver, J.W.5
-
104
-
-
39549101754
-
Solution structure of ribosomal protein L40E, a unique C4 zinc finger protein encoded by archaeon Sulfolobus solfataricus
-
DOI 10.1110/ps.073273008
-
Wu B, Lukin J, Yee A, Lemak A, Semesi A, Ramelot TA, Kennedy MA, Arrowsmith CH (2008) Solution structure of ribosomal protein L40E, a unique C4 zinc finger protein encoded by archaeon Sulfolobus solfataricus. Protein Sci 17(3):589-596 (Pubitemid 351281561)
-
(2008)
Protein Science
, vol.17
, Issue.3
, pp. 589-596
-
-
Wu, B.1
Lukin, J.2
Yee, A.3
Lemak, A.4
Semesi, A.5
Ramelot, T.A.6
Kennedy, M.A.7
Arrowsmith, C.H.8
-
105
-
-
80855132587
-
Evaluation of residue-residue contact predictions in CASP9
-
Monastyrskyy B, Fidelis K, Tramontano A, Kryshtafovych A (2011) Evaluation of residue-residue contact predictions in CASP9. Proteins 79(Suppl 10):119-125
-
(2011)
Proteins
, vol.79
, Issue.SUPPL. 10
, pp. 119-125
-
-
Monastyrskyy, B.1
Fidelis, K.2
Tramontano, A.3
Kryshtafovych, A.4
-
106
-
-
0035220932
-
The protein non-folding problem: Amino acid determinants of intrinsic order and disorder
-
Williams RM, Obradovi Z, Mathura V, Braun W, Garner EC, Young J, Takayama S, Brown CJ, Dunker AK (2001) The protein non-folding problem: amino acid determinants of intrinsic order and disorder. Pac Symp Biocomput 6:89-100
-
(2001)
Pac Symp Biocomput
, vol.6
, pp. 89-100
-
-
Williams, R.M.1
Obradovi, Z.2
Mathura, V.3
Braun, W.4
Garner, E.C.5
Young, J.6
Takayama, S.7
Brown, C.J.8
Dunker, A.K.9
-
107
-
-
0035188314
-
Sequence complexity of disordered protein
-
Romero P, Obradovic Z, Li X, Garner EC, Brown CJ, Dunker AK (2001) Sequence complexity of disordered protein. Proteins 42(1):38-48
-
(2001)
Proteins
, vol.42
, Issue.1
, pp. 38-48
-
-
Romero, P.1
Obradovic, Z.2
Li, X.3
Garner, E.C.4
Brown, C.J.5
Dunker, A.K.6
-
108
-
-
9344260242
-
RNA chaperone activity of large ribosomal subunit proteins from Escherichia coli
-
DOI 10.1261/rna.7121704
-
Semrad K, Green R, Schroeder R (2004) RNA chaperone activity of large ribosomal subunit proteins from Escherichia coli. RNA 10(12):1855-1860 (Pubitemid 39557823)
-
(2004)
RNA
, vol.10
, Issue.12
, pp. 1855-1860
-
-
Semrad, K.1
Green, R.2
Schroeder, R.3
-
110
-
-
79951905332
-
Multitude of binding modes attainable by intrinsically disordered proteins: A portrait gallery of disorder-based complexes
-
Uversky VN (2011) Multitude of binding modes attainable by intrinsically disordered proteins: a portrait gallery of disorder-based complexes. Chem Soc Rev 40(3):1623-1634
-
(2011)
Chem Soc Rev
, vol.40
, Issue.3
, pp. 1623-1634
-
-
Uversky, V.N.1
-
111
-
-
0025912715
-
The assembly of prokaryotic ribosomes
-
Nierhaus KH (1991) The assembly of prokaryotic ribosomes. Biochimie 73(6):739-755
-
(1991)
Biochimie
, vol.73
, Issue.6
, pp. 739-755
-
-
Nierhaus, K.H.1
-
112
-
-
0018129317
-
Mutational alterations in 50 proteins of the Escherichia coli ribosome
-
Dabbs ER (1978) Mutational alterations in 50 proteins of the Escherichia coli ribosome. Mol Gen Genet 165(1):73-78
-
(1978)
Mol Gen Genet
, vol.165
, Issue.1
, pp. 73-78
-
-
Dabbs, E.R.1
-
113
-
-
0004637907
-
Mutant studies on the prokaryotic ribosome
-
Hardesty B, Kramer G (eds) Springer, New York
-
Dabbs ER (1986) Mutant studies on the prokaryotic ribosome. In: Hardesty B, Kramer G (eds) Structure, function and genetics of ribosomes. Springer, New York, pp 733-748
-
(1986)
Structure, Function and Genetics of Ribosomes
, pp. 733-748
-
-
Dabbs, E.R.1
-
114
-
-
33645214608
-
Disordered domains and high surface charge confer hubs with the ability to interact with multiple proteins in interaction networks
-
Patil A, Nakamura H (2006) Disordered domains and high surface charge confer hubs with the ability to interact with multiple proteins in interaction networks. FEBS Lett 580(8):2041-2045
-
(2006)
FEBS Lett
, vol.580
, Issue.8
, pp. 2041-2045
-
-
Patil, A.1
Nakamura, H.2
-
115
-
-
33745686603
-
What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae?
-
Ekman D, Light S, Bjorklund AK, Elofsson A (2006) What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae? Genome Biol 7(6):R45
-
(2006)
Genome Biol
, vol.7
, Issue.6
-
-
Ekman, D.1
Light, S.2
Bjorklund, A.K.3
Elofsson, A.4
-
116
-
-
33748074139
-
Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes
-
Haynes C, Oldfield CJ, Ji F, Klitgord N, Cusick ME, Radivojac P, Uversky VN, Vidal M, Iakoucheva LM (2006) Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes. PLoS Comput Biol 2(8):e100
-
(2006)
PLoS Comput Biol
, vol.2
, Issue.8
-
-
Haynes, C.1
Oldfield, C.J.2
Ji, F.3
Klitgord, N.4
Cusick, M.E.5
Radivojac, P.6
Uversky, V.N.7
Vidal, M.8
Iakoucheva, L.M.9
-
117
-
-
33750999318
-
Disorder and sequence repeats in hub proteins and their implications for network evolution
-
DOI 10.1021/pr060171o
-
Dosztanyi Z, Chen J, Dunker AK, Simon I, Tompa P (2006) Disorder and sequence repeats in hub proteins and their implications for network evolution. J Proteome Res 5(11):2985-2995 (Pubitemid 44749217)
-
(2006)
Journal of Proteome Research
, vol.5
, Issue.11
, pp. 2985-2995
-
-
Dosztanyi, Z.1
Chen, J.2
Dunker, A.K.3
Simon, I.4
Tompa, P.5
-
118
-
-
33847081239
-
Role of intrinsic disorder in transient interactions of hub proteins
-
Singh GP, Ganapathi M, Dash D (2007) Role of intrinsic disorder in transient interactions of hub proteins. Proteins 66(4):761-765
-
(2007)
Proteins
, vol.66
, Issue.4
, pp. 761-765
-
-
Singh, G.P.1
Ganapathi, M.2
Dash, D.3
-
119
-
-
34447558571
-
Intrinsic disorder in yeast transcriptional regulatory network
-
DOI 10.1002/prot.21497
-
Singh GP, Dash D (2007) Intrinsic disorder in yeast transcriptional regulatory network. Proteins 68(3):602-605 (Pubitemid 47068300)
-
(2007)
Proteins: Structure, Function and Genetics
, vol.68
, Issue.3
, pp. 602-605
-
-
Singh, G.P.1
Dash, D.2
-
120
-
-
0029974453
-
Extraribosomal functions of ribosomal proteins
-
Wool IG (1996) Extraribosomal functions of ribosomal proteins. Trends Biochem Sci 21(5):164-165
-
(1996)
Trends Biochem Sci
, vol.21
, Issue.5
, pp. 164-165
-
-
Wool, I.G.1
-
121
-
-
23944514504
-
Structural disorder throws new light on moonlighting
-
DOI 10.1016/j.tibs.2005.07.008, PII S0968000405002185
-
Tompa P, Szasz C, Buday L (2005) Structural disorder throws new light on moonlighting. Trends Biochem Sci 30(9):484-489 (Pubitemid 41206503)
-
(2005)
Trends in Biochemical Sciences
, vol.30
, Issue.9
, pp. 484-489
-
-
Tompa, P.1
Szasz, C.2
Buday, L.3
-
122
-
-
57749097722
-
Transcription by moonlight: Structural basis of an extraribosomal activity of ribosomal protein S10
-
Weisberg RA (2008) Transcription by moonlight: structural basis of an extraribosomal activity of ribosomal protein S10. Mol Cell 32(6):747-748
-
(2008)
Mol Cell
, vol.32
, Issue.6
, pp. 747-748
-
-
Weisberg, R.A.1
-
123
-
-
58249107143
-
Emerging functions of ribosomal proteins in gene-specific transcription and translation
-
Lindstrom MS (2009) Emerging functions of ribosomal proteins in gene-specific transcription and translation. Biochem Biophys Res Commun 379(2):167-170
-
(2009)
Biochem Biophys Res Commun
, vol.379
, Issue.2
, pp. 167-170
-
-
Lindstrom, M.S.1
-
124
-
-
63649157049
-
How common are extraribosomal functions of ribosomal proteins?
-
Warner JR, McIntosh KB (2009) How common are extraribosomal functions of ribosomal proteins? Mol Cell 34(1):3-11
-
(2009)
Mol Cell
, vol.34
, Issue.1
, pp. 3-11
-
-
Warner, J.R.1
McIntosh, K.B.2
-
125
-
-
58849112297
-
Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli
-
Singh D, Chang SJ, Lin PH, Averina OV, Kaberdin VR, Lin-Chao S (2009) Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli. Proc Natl Acad Sci USA 106(3):864-869
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.3
, pp. 864-869
-
-
Singh, D.1
Chang, S.J.2
Lin, P.H.3
Averina, O.V.4
Kaberdin, V.R.5
Lin-Chao, S.6
-
126
-
-
0023414494
-
Autogenous control of the S10 ribosomal protein operon of Escherichia coli: Genetic dissection of transcriptional and posttranscriptional regulation
-
Freedman LP, Zengel JM, Archer RH, Lindahl L (1987) Autogenous control of the S10 ribosomal protein operon of Escherichia coli: genetic dissection of transcriptional and posttranscriptional regulation. Proc Natl Acad Sci USA 84(18):6516-6520
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, Issue.18
, pp. 6516-6520
-
-
Freedman, L.P.1
Zengel, J.M.2
Archer, R.H.3
Lindahl, L.4
-
127
-
-
0025375756
-
Escherichia coli ribosomal protein L4 stimulates transcription termination at a specific site in the leader of the S10 operon independent of L4-mediated inhibition of translation
-
DOI 10.1016/S0022-2836(05)80122-6
-
Zengel JM, Lindahl L (1990) Escherichia coli ribosomal protein L4 stimulates transcription termination at a specific site in the leader of the S10 operon independent of L4-mediated inhibition of translation. J Mol Biol 213(1):67-78 (Pubitemid 20171098)
-
(1990)
Journal of Molecular Biology
, vol.213
, Issue.1
, pp. 67-78
-
-
Zengel, J.M.1
Lindahl, L.2
-
128
-
-
0025269449
-
Ribosomal protein L4 stimulates in vitro termination of transcription at a NusA-dependent terminator in the S10 operon leader
-
Zengel JM, Lindahl L (1990) Ribosomal protein L4 stimulates in vitro termination of transcription at a NusA-dependent terminator in the S10 operon leader. Proc Natl Acad Sci USA 87(7):2675-2679
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, Issue.7
, pp. 2675-2679
-
-
Zengel, J.M.1
Lindahl, L.2
-
129
-
-
0029845147
-
Ribosomal protein L4 from Escherichia coli utilizes nonidentical determinants for its structural and regulatory functions
-
Li X, Lindahl L, Zengel JM (1996) Ribosomal protein L4 from Escherichia coli utilizes nonidentical determinants for its structural and regulatory functions. RNA 2(1):24-37 (Pubitemid 26371309)
-
(1996)
RNA
, vol.2
, Issue.1
, pp. 24-37
-
-
Li, X.1
Lindahl, L.2
Zengel, J.M.3
-
130
-
-
0025827734
-
Structural basis for the regulation of splicing of a yeast messenger RNA
-
Eng FJ, Warner JR (1991) Structural basis for the regulation of splicing of a yeast messenger RNA. Cell 65(5):797-804 (Pubitemid 121001311)
-
(1991)
Cell
, vol.65
, Issue.5
, pp. 797-804
-
-
Eng, F.J.1
Warner, J.R.2
-
131
-
-
0032939495
-
Ribosomal protein S14 of Saccharomyces cerevisiae regulates its expression by binding to RPS14B pre-mRNA and to 18S rRNA
-
Fewell SW, Woolford JL Jr (1999) Ribosomal protein S14 of Saccharomyces cerevisiae regulates its expression by binding to RPS14B pre-mRNA and to 18S rRNA. Mol Cell Biol 19(1):826-834 (Pubitemid 29018483)
-
(1999)
Molecular and Cellular Biology
, vol.19
, Issue.1
, pp. 826-834
-
-
Fewell, S.W.1
Woolford Jr., J.L.2
-
132
-
-
0025770052
-
The ribosomal protein L2 in S.cerevisiae controls the level of accumulation of its own mRNA
-
Presutti C, Ciafre SA, Bozzoni I (1991) The ribosomal protein L2 in S. cerevisiae controls the level of accumulation of its own mRNA. EMBO J 10(8):2215-2221 (Pubitemid 21905694)
-
(1991)
EMBO Journal
, vol.10
, Issue.8
, pp. 2215-2221
-
-
Presutti, C.1
Ciafre, S.-A.2
Bozzoni, I.3
-
133
-
-
36148994348
-
Human ribosomal protein S13 regulates expression of its own gene at the splicing step by a feedback mechanism
-
DOI 10.1093/nar/gkm701
-
Malygin A, Parakhnevitch NM, Ivanov AV, Eperon IC, Karpova GG (2007) Human ribosomal protein S13 regulates expression of its own gene at the splicing step by a feedback mechanism. Nucleic Acids Res 35(19):6414-6423 (Pubitemid 350111611)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.19
, pp. 6414-6423
-
-
Malygin, A.A.1
Parakhnevitch, N.M.2
Ivanov, A.V.3
Eperon, I.C.4
Karpova, G.G.5
-
134
-
-
34249848827
-
Human ribosomal protein S13 inhibits splicing of the own pre-mRNA
-
Parakhnevich NM, Ivanov AV, Malygin A, Karpova GG (2007) Human ribosomal protein S13 inhibits splicing of the own pre-mRNA. Mol Biol (Mosk) 41(1):51-58
-
(2007)
Mol Biol (Mosk)
, vol.41
, Issue.1
, pp. 51-58
-
-
Parakhnevich, N.M.1
Ivanov, A.V.2
Malygin, A.3
Karpova, G.G.4
-
135
-
-
0033856880
-
Unproductively spliced ribosomal protein mRNAs are natural targets of mRNA surveillance in C. Elegans
-
Mitrovich QM, Anderson P (2000) Unproductively spliced ribosomal protein mRNAs are natural targets of mRNA surveillance in C. elegans. Genes Dev 14(17):2173-2184
-
(2000)
Genes Dev
, vol.14
, Issue.17
, pp. 2173-2184
-
-
Mitrovich, Q.M.1
Anderson, P.2
-
136
-
-
36849148382
-
Origin of life: The RNA world
-
Gilbert W (1986) Origin of life: the RNA world. Nature 319(6055):618
-
(1986)
Nature
, vol.319
, Issue.6055
, pp. 618
-
-
Gilbert, W.1
-
139
-
-
0032479475
-
Origins of globular structure in proteins
-
DOI 10.1016/S0014-5793(98)00674-7, PII S0014579398006747
-
Doi N, Yanagawa H (1998) Origins of globular structure in proteins. FEBS Lett 430(3):150-153 (Pubitemid 28337902)
-
(1998)
FEBS Letters
, vol.430
, Issue.3
, pp. 150-153
-
-
Doi, N.1
Yanagawa, H.2
|