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Volumn 108, Issue 4, 2011, Pages 1308-1313

An intrinsically disordered C terminus allows the la protein to assist the biogenesis of diverse noncoding RNA precursors

Author keywords

Noncoding RNA biogenesis; RNA binding protein; Unstructured domain

Indexed keywords

LA ANTIGEN; PROTEINASE; RIBOSOME RNA; RNA BINDING PROTEIN; RNA PRECURSOR; TRANSFER RNA;

EID: 79952182929     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1017085108     Document Type: Article
Times cited : (34)

References (33)
  • 1
    • 55049119136 scopus 로고    scopus 로고
    • Posttranscriptional regulation of miRNAs harboring conserved terminal loops
    • Michlewski G, Guil S, Semple CA, Caceres JF (2008) Posttranscriptional regulation of miRNAs harboring conserved terminal loops. Mol Cell 32:383-393.
    • (2008) Mol Cell , vol.32 , pp. 383-393
    • Michlewski, G.1    Guil, S.2    Semple, C.A.3    Caceres, J.F.4
  • 2
    • 67649277689 scopus 로고    scopus 로고
    • The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs
    • Trabucchi M, et al. (2009) The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs. Nature 459:1010-1014.
    • (2009) Nature , vol.459 , pp. 1010-1014
    • Trabucchi, M.1
  • 3
    • 0037829212 scopus 로고    scopus 로고
    • The pleiotropic functions of the Y-box-binding protein, YB-1
    • Kohno K, Izumi H, Uchiumi T, Ashizuka M, Kuwano M (2003) The pleiotropic functions of the Y-box-binding protein, YB-1. Bioessays 25:691-698.
    • (2003) Bioessays , vol.25 , pp. 691-698
    • Kohno, K.1    Izumi, H.2    Uchiumi, T.3    Ashizuka, M.4    Kuwano, M.5
  • 5
    • 77953694873 scopus 로고    scopus 로고
    • Conserved and divergent features of the structure and function of la and la-related proteins (LARPs)
    • Bayfield MA, Yang R, Maraia RJ (2010) Conserved and divergent features of the structure and function of La and La-related proteins (LARPs). Biochim Biophys Acta 1799:365-378.
    • (2010) Biochim Biophys Acta , vol.1799 , pp. 365-378
    • Bayfield, M.A.1    Yang, R.2    Maraia, R.J.3
  • 8
    • 0347717583 scopus 로고    scopus 로고
    • Identification of Lhp1p-associated RNAs by microarray analysis in Saccharomyces cerevisiae reveals association with coding and noncoding RNAs
    • DOI 10.1073/pnas.0307425100
    • Inada M, Guthrie C (2004) Identification of Lhp1p-associated RNAs by microarray analysis in Saccharomyces cerevisiae reveals association with coding and noncoding RNAs. Proc Natl Acad Sci USA 101:434-439. (Pubitemid 38084654)
    • (2004) Proceedings of the National Academy of Sciences of the United States of America , vol.101 , Issue.2 , pp. 434-439
    • Inada, M.1    Guthrie, C.2
  • 9
    • 0030904723 scopus 로고    scopus 로고
    • The yeast la protein is required for the 3' endonucleolytic cleavage that matures tRNA precursors
    • DOI 10.1016/S0092-8674(00)80220-2
    • Yoo CJ, Wolin SL (1997) The yeast La protein is required for the 3′ endonucleolytic cleavage that matures tRNA precursors. Cell 89:393-402. (Pubitemid 27220884)
    • (1997) Cell , vol.89 , Issue.3 , pp. 393-402
    • Yoo, C.J.1    Wolin, S.L.2
  • 10
    • 25844451002 scopus 로고    scopus 로고
    • Downregulation of the essential Trypanosoma brucei la protein affects accumulation of elongator methionyl-tRNA
    • DOI 10.1016/j.molbiopara.2005.06.006, PII S0166685105001945
    • Arhin GK, Shen S, Perez IF, Tschudi C, Ullu E (2005) Downregulation of the essential Trypanosoma brucei La protein affects accumulation of elongator methionyl-tRNA. Mol Biochem Parasitol 144:104-108. (Pubitemid 41393376)
    • (2005) Molecular and Biochemical Parasitology , vol.144 , Issue.1 , pp. 104-108
    • Arhin, G.K.1    Shen, S.2    Perez, I.F.3    Tschudi, C.4    Ullu, E.5
  • 11
    • 0347747969 scopus 로고    scopus 로고
    • A la protein requirement for efficient pre-tRNA folding
    • DOI 10.1093/emboj/cdg625
    • Chakshusmathi G, Kim SD, Rubinson DA, Wolin SL (2003) A La protein requirement for efficient pre-tRNA folding. EMBO J 22:6562-6572. (Pubitemid 38009603)
    • (2003) EMBO Journal , vol.22 , Issue.24 , pp. 6562-6572
    • Chakshusmathi, G.1    Kim, S.D.2    Rubinson, D.A.3    Wolin, S.L.4
  • 12
    • 3242700394 scopus 로고    scopus 로고
    • La autoantigen is necessary for optimal function of the poliovirus and hepatitis C virus internal ribosome entry site in vivo and in vitro
    • DOI 10.1128/MCB.24.15.6861-6870.2004
    • Costa-Mattioli M, Svitkin Y, Sonenberg N (2004) La autoantigen is necessary for optimal function of the poliovirus and hepatitis C virus internal ribosome entry site in vivo and in vitro. Mol Cell Biol 24:6861-6870. (Pubitemid 38944363)
    • (2004) Molecular and Cellular Biology , vol.24 , Issue.15 , pp. 6861-6870
    • Costa-Mattioli, M.1    Svitkin, Y.2    Sonenberg, N.3
  • 13
    • 0038646814 scopus 로고    scopus 로고
    • Structure of the C-terminal domain of human la protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element
    • DOI 10.1016/S0969-2126(03)00121-7
    • Jacks A, et al. (2003) Structure of the C-terminal domain of human La protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element. Structure 11:833-843. (Pubitemid 36830847)
    • (2003) Structure , vol.11 , Issue.7 , pp. 833-843
    • Jacks, A.1    Babon, J.2    Kelly, G.3    Manolaridis, I.4    Cary, P.D.5    Curry, S.6    Conte, M.R.7
  • 15
    • 1842419667 scopus 로고    scopus 로고
    • Structure of the la motif: A winged helix domain mediates RNA binding via a conserved aromatic patch
    • DOI 10.1038/sj.emboj.7600115
    • Dong G, Chakshusmathi G, Wolin SL, Reinisch KM (2004) Structure of the La motif: a winged helix domain mediates RNA binding via a conserved aromatic patch. EMBO J 23:1000-1007. (Pubitemid 38436865)
    • (2004) EMBO Journal , vol.23 , Issue.5 , pp. 1000-1007
    • Dong, G.1    Chakshusmathi, G.2    Wolin, S.L.3    Reinisch, K.M.4
  • 16
    • 29544449398 scopus 로고    scopus 로고
    • OH 3′ temini of nascent RNA polymerase III transcripts by La, a rheumatic disease autoantigen
    • DOI 10.1016/j.molcel.2005.10.027, PII S1097276505017223
    • Teplova M, et al. (2006) Structural basis for recognition and sequestration of UUU(OH) 3′ termini of nascent RNA polymerase III transcripts by La, a rheumatic disease autoantigen. Mol Cell 21:75-85. (Pubitemid 43017850)
    • (2006) Molecular Cell , vol.21 , Issue.1 , pp. 75-85
    • Teplova, M.1    Yuan, Y.-R.2    Phan, A.T.3    Malinina, L.4    Ilin, S.5    Teplov, A.6    Patel, D.J.7
  • 17
    • 44649173098 scopus 로고    scopus 로고
    • Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3′ Ends by the Human la Protein
    • DOI 10.1016/j.str.2008.02.021, PII S0969212608001421
    • Kotik-Kogan O, Valentine ER, Sanfelice D, Conte MR, Curry S (2008) Structural analysis reveals conformational plasticity in the recognition of RNA 3′ ends by the human La protein. Structure 16:852-862. (Pubitemid 351778374)
    • (2008) Structure , vol.16 , Issue.6 , pp. 852-862
    • Kotik-Kogan, O.1    Valentine, E.R.2    Sanfelice, D.3    Conte, M.R.4    Curry, S.5
  • 18
    • 64049093886 scopus 로고    scopus 로고
    • Precursor-product discrimination by la protein during tRNA metabolism
    • Bayfield MA, Maraia RJ (2009) Precursor-product discrimination by La protein during tRNA metabolism. Nat Struct Mol Biol 16:430-437.
    • (2009) Nat Struct Mol Biol , vol.16 , pp. 430-437
    • Bayfield, M.A.1    Maraia, R.J.2
  • 19
    • 0031426653 scopus 로고    scopus 로고
    • A nuclear import pathway for a protein involved in tRNA maturation
    • DOI 10.1083/jcb.139.7.1655
    • Rosenblum JS, Pemberton LF, Blobel G (1997) A nuclear import pathway for a protein involved in tRNA maturation. J Cell Biol 139:1655-1661. (Pubitemid 28079231)
    • (1997) Journal of Cell Biology , vol.139 , Issue.7 , pp. 1655-1661
    • Rosenblum, J.S.1    Pemberton, L.F.2    Blobel, G.3
  • 20
    • 0032535451 scopus 로고    scopus 로고
    • A role for the yeast la protein in U6 snRNP assembly: Evidence that the la protein is a molecular chaperone for RNA polymerase III transcripts
    • DOI 10.1093/emboj/17.24.7442
    • Pannone BK, Xue D, Wolin SL (1998) A role for the yeast La protein in U6 snRNP assembly: evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts. EMBO J 17:7442-7453. (Pubitemid 29002711)
    • (1998) EMBO Journal , vol.17 , Issue.24 , pp. 7442-7453
    • Pannone, B.K.1    Xue, D.2    Wolin, S.L.3
  • 21
    • 0035163788 scopus 로고    scopus 로고
    • Phosphorylation of the Saccharomyces cerevisiae la protein does not appear to be required for its functions in tRNA maturation and nascent RNA stabilization
    • Long KS, et al. (2001) Phosphorylation of the Saccharomyces cerevisiaeLa protein does not appear to be required for its functions in tRNA maturation and nascent RNA stabilization. RNA 7:1589-1602. (Pubitemid 33078934)
    • (2001) RNA , vol.7 , Issue.11 , pp. 1589-1602
    • Long, K.S.1    Cedervall, T.2    Walch-Solimena, C.3    Noe, D.A.4    Huddleston, M.J.5    Annan, R.S.6    Wolin, S.L.7
  • 22
    • 3242891318 scopus 로고    scopus 로고
    • The DISOPRED server for the prediction of protein disorder
    • DOI 10.1093/bioinformatics/bth195
    • Ward JJ, McGuffin LJ, Bryson K, Buxton BF, Jones DT (2004) The DISOPRED server for the prediction of protein disorder. Bioinformatics 20:2138-2139. (Pubitemid 39236567)
    • (2004) Bioinformatics , vol.20 , Issue.13 , pp. 2138-2139
    • Ward, J.J.1    McGuffin, L.J.2    Bryson, K.3    Buxton, B.F.4    Jones, D.T.5
  • 24
    • 0028017605 scopus 로고
    • La proteins from Drosophila melanogaster and Saccharomyces cerevisiae: A yeast homolog of the la autoantigen is dispensable for growth
    • Yoo CJ, Wolin SL (1994) La proteins from Drosophila melanogaster and Saccharomyces cerevisiae: a yeast homolog of the La autoantigen is dispensable for growth. Mol Cell Biol 14:5412-5424. (Pubitemid 24235969)
    • (1994) Molecular and Cellular Biology , vol.14 , Issue.8 , pp. 5412-5424
    • Yoo, C.J.1    Wolin, S.L.2
  • 25
    • 14644435825 scopus 로고    scopus 로고
    • Intrinsically unstructured proteins and their functions
    • DOI 10.1038/nrm1589
    • Dyson HJ, Wright PE (2005) Intrinsically unstructured proteins and their functions. Nat Rev Mol Cell Biol 6:197-208. (Pubitemid 40314921)
    • (2005) Nature Reviews Molecular Cell Biology , vol.6 , Issue.3 , pp. 197-208
    • Dyson, H.J.1    Wright, P.E.2
  • 26
    • 44149101017 scopus 로고    scopus 로고
    • Competition between the Rex1 exonuclease and the la protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation
    • DOI 10.1261/rna.1050408
    • Copela LA, Fernandez CF, Sherrer RL, Wolin SL (2008) Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. RNA 14:1214-1227. (Pubitemid 351717500)
    • (2008) RNA , vol.14 , Issue.6 , pp. 1214-1227
    • Copela, L.A.1    Fernandez, C.F.2    Sherrer, R.L.3    Wolin, S.L.4
  • 27
    • 3442902456 scopus 로고    scopus 로고
    • The role of structural disorder in the function of RNA and protein chaperones
    • DOI 10.1096/fj.04-1584rev
    • Tompa P, Csermely P (2004) The role of structural disorder in the function of RNA and protein chaperones. Faseb J 18:1169-1175. (Pubitemid 39006878)
    • (2004) FASEB Journal , vol.18 , Issue.11 , pp. 1169-1175
    • Tompa, P.1    Csermely, P.2
  • 28
    • 39049131090 scopus 로고    scopus 로고
    • RNA chaperones, RNA annealers and RNA helicases
    • Rajkowitsch L, et al. (2007) RNA chaperones, RNA annealers and RNA helicases. RNA Biol 4:118-130.
    • (2007) RNA Biol , vol.4 , pp. 118-130
    • Rajkowitsch, L.1
  • 29
    • 33645473067 scopus 로고    scopus 로고
    • The la protein functions redundantly with tRNA modification enzymes to ensure tRNA structural stability
    • Copela LA, Chakshusmathi G, Sherrer RL, Wolin SL (2006) The La protein functions redundantly with tRNA modification enzymes to ensure tRNA structural stability. RNA 12:644-654.
    • (2006) RNA , vol.12 , pp. 644-654
    • Copela, L.A.1    Chakshusmathi, G.2    Sherrer, R.L.3    Wolin, S.L.4
  • 30
    • 0029400768 scopus 로고
    • A correlation between N2-dimethylguanosine presence and alternate tRNA conformers
    • Steinberg S, Cedergren R (1995) A correlation between N2-dimethylguanosine presence and alternate tRNA conformers. RNA 1:886-891.
    • (1995) RNA , vol.1 , pp. 886-891
    • Steinberg, S.1    Cedergren, R.2
  • 31
    • 0025978949 scopus 로고
    • Getting started with yeast
    • Sherman F (1991) Getting started with yeast. Methods Enzymol 194:3-21.
    • (1991) Methods Enzymol , vol.194 , pp. 3-21
    • Sherman, F.1
  • 32
    • 0032745787 scopus 로고    scopus 로고
    • Two yeast la motif-containing proteins are RNA-binding proteins that associate with polyribosomes
    • Sobel SG, Wolin SL (1999) Two yeast La motif-containing proteins are RNA-binding proteins that associate with polyribosomes. Mol Biol Cell 10:3849-3862. (Pubitemid 29534030)
    • (1999) Molecular Biology of the Cell , vol.10 , Issue.11 , pp. 3849-3862
    • Sobel, S.G.1    Wolin, S.L.2
  • 33
    • 0026350896 scopus 로고
    • Direct analysis of aminoacylation levels of tRNAs in Vivo: Application to studying recognition of Escherichia coli initiator tRNA mutants by glutaminyl-tRNA synthetase
    • Varshney U, Lee CP, RajBhandary UL (1991) Direct analysis of aminoacylation levels of tRNAs in vivo. Application to studying recognition of Escherichia coli initiator tRNA mutants by glutaminyl-tRNA synthetase. J Biol Chem 266:24712-24718. (Pubitemid 21909000)
    • (1991) Journal of Biological Chemistry , vol.266 , Issue.36 , pp. 24712-24718
    • Varshney, U.1    Lee, C.-P.2    RajBhandary, U.L.3


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