RPG: The Ribosomal Protein Gene database

Nucleic Acids Research

Volumn 32, Issue DATABASE ISS., 2004, Pages

  Nakao, Akihiro ^a   Yoshihama, Maki ^a   Kenmochi, Naoya ^a  

^a UNIVERSITY OF MIYAZAKI   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; RIBOSOME PROTEIN; SMALL NUCLEOLAR RNA;

AMINO ACID SEQUENCE; ARTICLE; CAENORHABDITIS ELEGANS; COMPARATIVE STUDY; DNA SEQUENCE; DROSOPHILA MELANOGASTER; ESCHERICHIA COLI; EXON; GENE LOCATION; GENE SEQUENCE; GENETIC CODE; GENETIC DATABASE; HUMAN; HUMAN COMPUTER INTERACTION; INFORMATION SYSTEM; INTERNET; INTRON; METHANOCOCCUS JANNASCHII; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOLOGY; PRIORITY JOURNAL; PROTEIN STRUCTURE; RIBOSOMAL PROTEIN GENE; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; EXONS; GENOMICS; HUMANS; INTERNET; INTRONS; MOLECULAR SEQUENCE DATA; RIBOSOMAL PROTEINS; RNA, SMALL NUCLEOLAR;

CAENORHABDITIS; CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER; ESCHERICHIA COLI; MELANOGASTER; METHANOCALDOCOCCUS JANNASCHII; METHANOCOCCUS; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE;

EID: 0347125312     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (10)

1. Wool,I.G., Chan,Y.L. and Glück,A. (1996) Mammalian ribosomes: The structure and the evolution of the proteins. In Hershey,J.W.B., Mathews,M.B. and Sonenberg,N. (eds), Translational Control. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 685-732.
2. Kenmochi,N., Kawaguchi,T., Rozen,S., Davis,E., Goodman,N., Hudson,T.J., Tanaka,T. and Page,D.C. (1998) A map of 75 human ribosomal protein genes. Genome Res., 8, 509-523.
3. Cole,J.R., Chai,B., Marsh,T.L., Farris,R.J., Wang,Q., Kulam,S.A., Chandra,S., McGarrell,D.M., Schmidt,T.M., Garrity,G.M. et al. (2003) The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res., 31, 442-443.
4. Zhang,Z., Harrison,P. and Gerstein,M. (2002) Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome. Genome Res., 12, 1466-1482.
5. Uechi,T., Tanaka,T. and Kenmochi,N. (2001) A complete map of the human ribosomal protein genes: assignment of 80 genes to the cytogenetic map and implications for human disorders. Genomics, 72, 223-230.
6. Yoshihama,M., Uechi,T., Asakawa,S., Kawasaki,K., Kato,S., Higa,S., Maeda,N., Minoshima,S., Tanaka,T., Shimizu,N. and Kenmochi,N. (2002) The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. Genome Res., 12, 379-390.
7. The FlyBase Consortium (2003) The FlyBase database of the Drosophila genome projects and community literature. Nucleic Acids Res., 31, 172-175.
8. Harris,T.W., Lee,R., Schwarz,E., Bradnam,K., Lawson,D., Chen,W., Blasier,D., Kenny,E., Cunningham,F., Kishore,R. et al. (2003) WormBase: a cross-species database for comparative genomics. Nucleic Acids Res., 31, 133-137.
9. Weng,S., Dong,Q., Balakrishnan,R., Christie,K., Costanzo,M., Dolinski,K., Dwight,S.S., Engel,S., Fisk,D.G., Hong,E. et al. (2003) Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins. Nucleic Acids Res., 31, 216-218.
10. Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.