Getting the most from PSI-BLAST

Trends in Biochemical Sciences

Volumn 27, Issue 3, 2002, Pages 161-164

  Jones, David T ^a   Swindells, Mark B ^b  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

^b Inpharmatica Ltd   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; AMINO ACID SUBSTITUTION; BIOINFORMATICS; COMPUTER PROGRAM; EXPERIMENTAL DESIGN; PREDICTION; PRIORITY JOURNAL; RELIABILITY; RESEARCH; REVIEW; SEQUENCE DATABASE; SEQUENCE HOMOLOGY;

EID: 0036495004     PISSN: 09680004     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0968-0004(01)02039-4     Document Type: Note

References (17)

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2. Hot papers in bioinformatics
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5. Combining sensitive database searches with multiple intermediates to detect distant homologues
6. Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods
7. Benchmarking PSI-BLAST in genome annotation
8. The structure of the superantigen exfoliative toxin A suggests a novel regulation as a serine protease
9. Accurate formula for P-values of gapped local sequence and profile alignments
10. Local sequence alignments with monotonic gap penalties
11. Statistics of local complexity in amino acid sequences and sequence databases
12. Homology-based fold predictions for Mycoplasma genitalium proteins
13. A model recognition approach to the prediction of all-helical membrane protein structure and topology
14. Predicting coiled coils from protein sequences
15. Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
16. Positionally cloned human disease genes: Patterns of evolutionary conservation and functional motifs
17. NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ