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Volumn 59, Issue , 2014, Pages 95-117

Insect mitochondrial genomics: Implications for evolution and phylogeny

Author keywords

Genome rearrangements; Insect phylogenetics; Minichromosomes; Organelle genomics; Phylogenomics; TRNA editing

Indexed keywords

ANIMAL; CLASSIFICATION; GENETICS; INSECT; INSECT GENOME; MITOCHONDRIAL GENOME; MOLECULAR EVOLUTION; PHYLOGENY;

EID: 84891906859     PISSN: 00664170     EISSN: None     Source Type: Book Series    
DOI: 10.1146/annurev-ento-011613-162007     Document Type: Article
Times cited : (1090)

References (141)
  • 1
    • 33646737852 scopus 로고    scopus 로고
    • Parallel evolution of the genetic code in arthropod mitochondrial genomes
    • Abascal F, Posada D, Knight RD, Zardoya R. 2006. Parallel evolution of the genetic code in arthropod mitochondrial genomes. PLoS Biol. 4:e127
    • (2006) PLoS Biol , vol.4
    • Abascal, F.1    Posada, D.2    Knight, R.D.3    Zardoya, R.4
  • 2
    • 0033978501 scopus 로고    scopus 로고
    • A multipartite mitochondrial genome in the potato cyst nematode globodera pallida
    • Armstrong MR, Blok VC, Phillips MS. 2000. A multipartite mitochondrial genome in the potato cyst nematode Globodera pallida. Genetics 154:181-92
    • (2000) Genetics , vol.154 , pp. 181-192
    • Armstrong, M.R.1    Blok, V.C.2    Phillips, M.S.3
  • 3
    • 0027898410 scopus 로고
    • Themitochondrial genome of themosquito anopheles gambiae: Dna sequence, genome organization and comparisons with mitochondrial sequences of other insects
    • BeardCB,HammDM,Collins FH. 1993. Themitochondrial genome of themosquito Anopheles gambiae: DNA sequence, genome organization and comparisons with mitochondrial sequences of other insects. Insect Mol. Biol. 2:103-24
    • (1993) Insect Mol. Biol , vol.2 , pp. 103-124
    • Beard, C.B.1    Hamm, D.M.2    Collins, F.H.3
  • 4
    • 84865818204 scopus 로고    scopus 로고
    • Mitochondrial genome sequences of nematocera (lower diptera): Evidence of rearrangement following a complete genome duplication in a winter crane fly
    • Beckenbach AT. 2011. Mitochondrial genome sequences of Nematocera (lower Diptera): Evidence of rearrangement following a complete genome duplication in a winter crane fly. Genome Biol. Evol. 4:89-101
    • (2011) Genome Biol. Evol , vol.4 , pp. 89-101
    • Beckenbach, A.T.1
  • 5
    • 79961199523 scopus 로고    scopus 로고
    • Mitochondrial genome sequences of representatives of three families of scorpionflies (order mecoptera) and evolution in a major duplication of coding sequences
    • Beckenbach AT. 2011. Mitochondrial genome sequences of representatives of three families of scorpionflies (order Mecoptera) and evolution in a major duplication of coding sequences. Genome 54:368-76
    • (2011) Genome , vol.54 , pp. 368-376
    • Beckenbach, A.T.1
  • 6
    • 78049243599 scopus 로고    scopus 로고
    • Evolution of the mitochondrial genomes of gall midges (diptera: Cecidomyiidae): Rearrangement and severe truncation of trna genes
    • Beckenbach AT, Joy JB. 2009. Evolution of the mitochondrial genomes of gall midges (Diptera: Cecidomyiidae): Rearrangement and severe truncation of tRNA genes. Genome Biol. Evol. 1:278-87
    • (2009) Genome Biol. Evol , vol.1 , pp. 278-287
    • Beckenbach, A.T.1    Joy, J.B.2
  • 7
    • 80051810002 scopus 로고    scopus 로고
    • Complete sequences of mitochondrial genomes of aedes aegypti and culex quinquefasciatus and comparative analysis of mitochondrial dna fragments inserted in the nuclear genomes
    • Behura SK, Lobo NF,Haas B, de Bruyn B, Lovin DD, et al. 2011. Complete sequences of mitochondrial genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes. Insect Biochem. Mol. Biol. 41:770-77
    • (2011) Insect Biochem. Mol. Biol , vol.41 , pp. 770-777
    • Behura, S.K.1    Lobo, N.F.2    Haas, B.3    De Bruyn, B.4    Lovin, D.D.5
  • 8
    • 70350545666 scopus 로고    scopus 로고
    • An algorithm for inferring mitogenome rearrangements in a phylogenetic tree
    • Bernt M, Merkle D, MiddendorfM. 2008. An algorithm for inferring mitogenome rearrangements in a phylogenetic tree. Lect. Notes Comput. Sci. 5267:143-57
    • (2008) Lect. Notes Comput. Sci , vol.5267 , pp. 143-157
    • Bernt, M.1    Merkle, D.2    Middendorf, M.3
  • 9
    • 36448941810 scopus 로고    scopus 로고
    • Crex: Inferring genomic rearrangements based on common intervals
    • Bernt M, Merkle D, Ramsch K, Fritzch G, Perseke M, et al. 2007. CREx: Inferring genomic rearrangements based on common intervals. Bioinformatics 23:2957-58
    • (2007) Bioinformatics , vol.23 , pp. 2957-2958
    • Bernt, M.1    Merkle, D.2    Ramsch, K.3    Fritzch, G.4    Perseke, M.5
  • 10
    • 0003695480 scopus 로고    scopus 로고
    • Transfer rna recognition by aminoacyl-Trna synthetases
    • Beuing PJ, Musier-Forsyth K. 1999. Transfer RNA recognition by aminoacyl-TRNA synthetases. Biopolymer 52:1-28
    • (1999) Biopolymer , vol.52 , pp. 1-28
    • Beuing, P.J.1    Musier-Forsyth, K.2
  • 11
    • 79952533164 scopus 로고    scopus 로고
    • Morphological and molecular evidence converge upon a robust phylogeny of the megadiverse Holometabola
    • Beutel RG, Friedrich F, Hörnschemeyer T, Pohl H, Hünefeld F, et al. 2010. Morphological and molecular evidence converge upon a robust phylogeny of the megadiverse Holometabola. Cladistics 26:1-15
    • (2010) Cladistics , vol.26 , pp. 1-15
    • Beutel, R.G.1    Friedrich, F.2    Hörnschemeyer, T.3    Pohl, H.4    Hünefeld, F.5
  • 12
    • 0033561361 scopus 로고    scopus 로고
    • Animal mitochondrial genomes
    • Boore JL. 1999. Animal mitochondrial genomes. Nucleic Acids Res. 27:1767-80
    • (1999) Nucleic Acids Res , vol.27 , pp. 1767-1780
    • Boore, J.L.1
  • 13
    • 0001298772 scopus 로고    scopus 로고
    • The duplication random-loss model for gene rearrangement exemplified by mitochondrial genomes of deuterosome animals
    • ed. D Sankoff, JH Nadeau,. Dordrecht, The Neth.: Kluwer Academic Publishers
    • Boore JL. 2000. The duplication random-loss model for gene rearrangement exemplified by mitochondrial genomes of deuterosome animals. In Comparative Genomics: Empirical and Analytical Approaches to Gene Order Dynamics, Map Alignment and the Evolution of Gene Families, ed. D Sankoff, JH Nadeau, pp. 133-48. Dordrecht, The Neth.: Kluwer Academic Publishers
    • (2000) Comparative Genomics: Empirical and Analytical Approaches to Gene Order Dynamics, Map Alignment and the Evolution of Gene Families , pp. 133-148
    • Boore, J.L.1
  • 14
    • 0031769998 scopus 로고    scopus 로고
    • Big trees from little genomes: Mitochondrial gene order as a phylogenetic tool
    • Boore JL, BrownWM. 1998. Big trees from little genomes: Mitochondrial gene order as a phylogenetic tool. Curr. Opin. Genet. Dev. 8:668-74
    • (1998) Curr. Opin. Genet. Dev , vol.8 , pp. 668-674
    • Boore, J.L.1    Brown, W.M.2
  • 15
    • 0032537194 scopus 로고    scopus 로고
    • Gene translocation links insects and crustaceans
    • Boore JL, Lavrov DV, Brown WM. 1998. Gene translocation links insects and crustaceans. Nature 392:667-68
    • (1998) Nature , vol.392 , pp. 667-668
    • Boore, J.L.1    Lavrov, D.V.2    Brown, W.M.3
  • 16
    • 77956231198 scopus 로고    scopus 로고
    • The mitochondrial genome of the onychophoran opisthopatus cinctipes (peripatopsidae) reflects the ancestral mitochondrial gene arrangement of panarthropoda and ecdysozoa
    • Braband A, Cameron SL, Podsiadlowski L, Daniels SR, Mayer G. 2010. The mitochondrial genome of the onychophoran Opisthopatus cinctipes (Peripatopsidae) reflects the ancestral mitochondrial gene arrangement of Panarthropoda and Ecdysozoa. Mol. Phylogenet. Evol. 57:285-92
    • (2010) Mol. Phylogenet. Evol , vol.57 , pp. 285-292
    • Braband, A.1    Cameron, S.L.2    Podsiadlowski, L.3    Daniels, S.R.4    Mayer, G.5
  • 17
    • 84872613838 scopus 로고    scopus 로고
    • Phylogeny of thrips (insecta: Thysanoptera) based on five molecular loci
    • Buckman RS, Mound LA, WhitingMF. 2013. Phylogeny of thrips (Insecta: Thysanoptera) based on five molecular loci. Syst. Entomol. 38:123-33
    • (2013) Syst. Entomol , vol.38 , pp. 123-133
    • Buckman, R.S.1    Mound, L.A.2    Whiting, M.F.3
  • 18
    • 34347222917 scopus 로고    scopus 로고
    • Sequencing complete mitochondrial and plastid genomes
    • Burger G, Lavrov DV, Forget L, Lang BF. 2007. Sequencing complete mitochondrial and plastid genomes. Nat. Prot. 2:603-14
    • (2007) Nat. Prot , vol.2 , pp. 603-614
    • Burger, G.1    Lavrov, D.V.2    Forget, L.3    Lang, B.F.4
  • 19
    • 28844486413 scopus 로고    scopus 로고
    • Mitochondrial genomics and the new insect order mantophasmatodea
    • Cameron SL, Barker SC, Whiting MF. 2006. Mitochondrial genomics and the new insect order Mantophasmatodea. Mol. Phylogenet. Evol. 38:274-79
    • (2006) Mol. Phylogenet. Evol , vol.38 , pp. 274-279
    • Cameron, S.L.1    Barker, S.C.2    Whiting, M.F.3
  • 20
    • 36148999042 scopus 로고    scopus 로고
    • The mitochondrial genome of the screamer louse bothriometopus (phthiraptera: Ischnocera): Effects of extensive gene rearrangements on the evolution of the genome
    • Cameron SL, Johnson KP,Whiting MF. 2007. The mitochondrial genome of the screamer louse Bothriometopus (Phthiraptera: Ischnocera): Effects of extensive gene rearrangements on the evolution of the genome. J. Mol. Evol. 65:589-604
    • (2007) J. Mol. Evol , vol.65 , pp. 589-604
    • Cameron, S.L.1    Johnson, K.P.2    Whiting, M.F.3
  • 21
    • 33845866870 scopus 로고    scopus 로고
    • A mitochondrial genome phylogeny of diptera: Whole genome sequence data accurately resolve relationships over broad timescales with high precision
    • Cameron SL, Lambkin CL, Barker SC, Whiting MF. 2007. A mitochondrial genome phylogeny of Diptera: Whole genome sequence data accurately resolve relationships over broad timescales with high precision. Syst. Entomol. 32:40-59
    • (2007) Syst. Entomol , vol.32 , pp. 40-59
    • Cameron, S.L.1    Lambkin, C.L.2    Barker, S.C.3    Whiting, M.F.4
  • 22
    • 84864564784 scopus 로고    scopus 로고
    • A mitochondrial genome phylogeny of termites (blattodea: Termitoidae): Robust support for interfamilial relationships andmolecular synapomorphies define major clades
    • Cameron SL, Lo N, Bourguignon T, Svenson GJ, Evans TA. 2012. A mitochondrial genome phylogeny of termites (Blattodea: Termitoidae): Robust support for interfamilial relationships andmolecular synapomorphies define major clades. Mol. Phylogenet. Evol. 65:162-73
    • (2012) Mol. Phylogenet. Evol , vol.65 , pp. 162-173
    • Cameron, S.L.1    Lo, N.2    Bourguignon, T.3    Svenson, G.J.4    Evans, T.A.5
  • 23
    • 13544270058 scopus 로고    scopus 로고
    • Mitochondrial genome data alone are not enough to unambiguously resolve the relationships of entognatha, insecta and crustacea sensu lato (arthropoda
    • Cameron SL, Miller KB, D'Haese CA, Whiting MF, Barker SC. 2004. Mitochondrial genome data alone are not enough to unambiguously resolve the relationships of Entognatha, Insecta and Crustacea sensu lato (Arthropoda). Cladistics 20:534-57
    • (2004) Cladistics , vol.20 , pp. 534-557
    • Cameron, S.L.1    Miller, K.B.2    D'Haese, C.A.3    Whiting, M.F.4    Barker, S.C.5
  • 24
    • 70350179971 scopus 로고    scopus 로고
    • A mitochondrial genome phylogeny of the neuropterida (lace-wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders
    • Cameron SL, Sullivan J, Song H, Miller KB, Whiting MF. 2009. A mitochondrial genome phylogeny of the Neuropterida (lace-wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders. Zool. Scr. 38:575-90
    • (2009) Zool. Scr , vol.38 , pp. 575-590
    • Cameron, S.L.1    Sullivan, J.2    Song, H.3    Miller, K.B.4    Whiting, M.F.5
  • 25
    • 79961011077 scopus 로고    scopus 로고
    • Mitochondrial genome deletions and minicircles are common in lice (insecta: Phthiraptera
    • Cameron SL, Yoshizawa K, Mizukoshi A, Whiting MF, Johnson KP. 2011. Mitochondrial genome deletions and minicircles are common in lice (Insecta: Phthiraptera). BMC Genomics 12:394
    • (2011) BMC Genomics , vol.12 , pp. 394
    • Cameron, S.L.1    Yoshizawa, K.2    Mizukoshi, A.3    Whiting, M.F.4    Johnson, K.P.5
  • 26
    • 84862509349 scopus 로고    scopus 로고
    • The completemitochondrial genomes of two ghostmoths, thitarodes renzhiensis and thitarodes yunnanensis: The ancestral gene arrangement in lepidoptera
    • Cao Y-Q,Ma C, Chen J-Y, YangD-R. 2012. The completemitochondrial genomes of two ghostmoths, Thitarodes renzhiensis and Thitarodes yunnanensis: The ancestral gene arrangement in Lepidoptera. BMC Genomics 13:276
    • (2012) BMC Genomics , vol.13 , pp. 276
    • Cao, Y.-Q.1    Ma, C.2    Chen, J.-Y.3    Yang, D.-R.4
  • 27
    • 34648851374 scopus 로고    scopus 로고
    • Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of hexapoda and crustacea
    • Carapelli A, Lio P, Nardi F, van der Wath E, Frati F. 2007. Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of Hexapoda and Crustacea. BMC Evol. Biol. 7:S8
    • (2007) BMC Evol. Biol , vol.7
    • Carapelli, A.1    Lio, P.2    Nardi, F.3    Van Der Wath, E.4    Frati, F.5
  • 28
    • 33748115313 scopus 로고    scopus 로고
    • The mitochondrial genome of the entomophagous endoparasite xenos vesparum (insecta: Strepsiptera
    • Carapelli A, Vannini L, Nardi F, Boore JL, Beani L, et al. 2006. The mitochondrial genome of the entomophagous endoparasite Xenos vesparum (Insecta: Strepsiptera). Gene 376:248-59
    • (2006) Gene , vol.376 , pp. 248-259
    • Carapelli, A.1    Vannini, L.2    Nardi, F.3    Boore, J.L.4    Beani, L.5
  • 29
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conservation blocks from multiple alignments for their use in phylogenetic analysis
    • Castresana J. 2000. Selection of conservation blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17:540-52
    • (2000) Mol. Biol. Evol , vol.17 , pp. 540-552
    • Castresana, J.1
  • 30
    • 0035986877 scopus 로고    scopus 로고
    • Contrasting rates of mitochondrial molecular evolution in parasitic diptera and hymenoptera
    • Castro LR, Austin AD, Dowton M. 2002. Contrasting rates of mitochondrial molecular evolution in parasitic Diptera and Hymenoptera. Mol. Biol. Evol. 19:1100-13
    • (2002) Mol. Biol. Evol , vol.19 , pp. 1100-1113
    • Castro, L.R.1    Austin, A.D.2    Dowton, M.3
  • 31
    • 0034072267 scopus 로고    scopus 로고
    • The current state of insect molecular systematics: A thriving tower of babel
    • Caterino MS, Cho S, Sperling FAH. 2000. The current state of insect molecular systematics: A thriving Tower of Babel. Annu. Rev. Entomol. 45:1-54
    • (2000) Annu. Rev. Entomol , vol.45 , pp. 1-54
    • Caterino, M.S.1    Cho, S.2    Sperling, F.A.H.3
  • 32
    • 0022271984 scopus 로고
    • Themitochondrialdnamolecular of drosophila yakuba: Nucleotide sequence, gene organization, and genetic code
    • ClaryDO,WolstenholmeDR. 1985. ThemitochondrialDNAmolecular of Drosophila yakuba: Nucleotide sequence, gene organization, and genetic code. J. Mol. Evol. 22:252-71
    • (1985) J. Mol. Evol , vol.22 , pp. 252-271
    • Clary, D.O.1    Wolstenholme, D.R.2
  • 33
    • 0019978703 scopus 로고
    • Replication of animal mitochondrial dna
    • Clayton DA. 1982. Replication of animal mitochondrial DNA. Cell 28:693-705
    • (1982) Cell , vol.28 , pp. 693-705
    • Clayton, D.A.1
  • 34
    • 0027398565 scopus 로고
    • The mitochondrial genome of the honeybee Apis mellifera: Complete sequence and genome organization
    • Crozier RH, Crozier YC. 1993. The mitochondrial genome of the honeybee Apis mellifera: Complete sequence and genome organization. Genetics 133:97-117
    • (1993) Genetics , vol.133 , pp. 97-117
    • Crozier, R.H.1    Crozier, Y.C.2
  • 35
    • 84855788141 scopus 로고    scopus 로고
    • Higher-level phylogeny of the insect order hemiptera: Is auchenorrhyncha really paraphyletic
    • Cryan JR, Urban JM. 2012. Higher-level phylogeny of the insect order Hemiptera: Is Auchenorrhyncha really paraphyletic? Syst. Entomol. 37:7-21
    • (2012) Syst Entomol , vol.37 , pp. 7-21
    • Cryan, J.R.1    Urban, J.M.2
  • 36
    • 84872615207 scopus 로고    scopus 로고
    • Phylogenomics of hemiptera (insecta: Paraneoptera) based on mitochondrial genomes
    • Cui Y, Xie Q, Hua J, Dang K, Zhou J, et al. 2013. Phylogenomics of Hemiptera (Insecta: Paraneoptera) based on mitochondrial genomes. Syst. Entomol. 38:233-45
    • (2013) Syst. Entomol , vol.38 , pp. 233-245
    • Cui, Y.1    Xie, Q.2    Hua, J.3    Dang, K.4    Zhou, J.5
  • 37
    • 84855818268 scopus 로고    scopus 로고
    • Phylogeny of cockroaches (insecta,dictyoptera, blattodea), with placement of aberrant taxa and exploration of out-group sampling
    • DjernæsM, Klass K-D, Picker MD,Damgaard J. 2012. Phylogeny of cockroaches (Insecta,Dictyoptera, Blattodea), with placement of aberrant taxa and exploration of out-group sampling. Syst. Entomol. 37:65-83
    • (2012) Syst. Entomol , vol.37 , pp. 65-83
    • Djernæs, M.1    Klass, K.-D.2    Picker, M.D.3    Damgaard, J.4
  • 38
    • 57049164177 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the sexual oribatid mite steganacarus magnus: Genome rearrangements and loss of trnas
    • Domes K, Maraun M, Scheu S, Cameron SL. 2008. The complete mitochondrial genome of the sexual oribatid mite Steganacarus magnus: Genome rearrangements and loss of tRNAs. BMC Genomics 9:532
    • (2008) BMC Genomics , vol.9 , pp. 532
    • Domes, K.1    Maraun, M.2    Scheu, S.3    Cameron, S.L.4
  • 39
    • 0033062252 scopus 로고    scopus 로고
    • Evolutionary dynamics of a mitochondrial rearrangement hot spot in the hymenoptera
    • Dowton M, Austin AD. 1999. Evolutionary dynamics of a mitochondrial rearrangement hot spot in the Hymenoptera. Mol. Biol. Evol. 16:298-309
    • (1999) Mol. Biol. Evol , vol.16 , pp. 298-309
    • Dowton, M.1    Austin, A.D.2
  • 40
    • 0036144965 scopus 로고    scopus 로고
    • Simultaneous molecular and morphological analysis of braconid relationships (insecta: Hymenoptera: Braconidae) indicates independent mt trna gene inversions within a single wasp family
    • Dowton M, Belshaw R, Austin AD, Quicke DL. 2002. Simultaneous molecular and morphological analysis of braconid relationships (Insecta: Hymenoptera: Braconidae) indicates independent mt tRNA gene inversions within a single wasp family. J. Mol. Evol. 54:210-26
    • (2002) J. Mol. Evol , vol.54 , pp. 210-226
    • Dowton, M.1    Belshaw, R.2    Austin, A.D.3    Quicke, D.L.4
  • 41
    • 67349206083 scopus 로고    scopus 로고
    • Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the hymenoptera: A lineage with both rapidly and slowly evolving mitochondrial genomes
    • Dowton M, Cameron SL, Austin AD, Whiting MF. 2009. Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the Hymenoptera: A lineage with both rapidly and slowly evolving mitochondrial genomes. Mol. Phylogenet. Evol. 52:512-19
    • (2009) Mol. Phylogenet. Evol , vol.52 , pp. 512-519
    • Dowton, M.1    Cameron, S.L.2    Austin, A.D.3    Whiting, M.F.4
  • 42
    • 67649347914 scopus 로고    scopus 로고
    • Characterization of 67mitochondrial tRNA gene rearrangements in the Hymenoptera suggests that mitochondrial tRNA gene position is selectively neutral
    • Dowton M, Cameron SL, Dowavic JI, Austin AD, WhitingMF. 2009. Characterization of 67mitochondrial tRNA gene rearrangements in the Hymenoptera suggests that mitochondrial tRNA gene position is selectively neutral. Mol. Biol. Evol. 26:1607-17
    • (2009) Mol. Biol. Evol , vol.26 , pp. 1607-1617
    • Dowton, M.1    Cameron, S.L.2    Dowavic, J.I.3    Austin, A.D.4    Whiting, M.F.5
  • 43
    • 0035358769 scopus 로고    scopus 로고
    • Intramitochondrial recombination: Is it why some mitochondrial genes sleep around
    • Dowton M, Campbell NJH. 2001. Intramitochondrial recombination: Is it why some mitochondrial genes sleep around? Trends Ecol. Evol. 16:269-71
    • (2001) Trends Ecol. Evol , vol.16 , pp. 269-271
    • Dowton, M.1    Campbell, N.J.H.2
  • 44
    • 0036408378 scopus 로고    scopus 로고
    • Mitochondrial gene rearrangements as phylogenetic characters in the invertebrates: The examination of genome morphology
    • Dowton M, Castro LR, Austin AD. 2002. Mitochondrial gene rearrangements as phylogenetic characters in the invertebrates: The examination of genome morphology. Invertebr. Syst. 16:345-56
    • (2002) Invertebr. Syst , vol.16 , pp. 345-356
    • Dowton, M.1    Castro, L.R.2    Austin, A.D.3
  • 45
    • 0037403369 scopus 로고    scopus 로고
    • Frequent mitochondrial gene rearrangements at the Hymenoptera nad3-nad5 junction
    • Dowton M, Castro LR, Campbell SL, Bargon SD, Austin AD. 2003. Frequent mitochondrial gene rearrangements at the Hymenoptera nad3-nad5 junction. J. Mol. Evol. 56:517-26
    • (2003) J. Mol. Evol , vol.56 , pp. 517-526
    • Dowton, M.1    Castro, L.R.2    Campbell, S.L.3    Bargon, S.D.4    Austin, A.D.5
  • 46
    • 33847708768 scopus 로고    scopus 로고
    • The complete mitochondrial genome sequence of the mormoncricket (anabrus simplex:tettigoniidae:orthoptera) and an analysis of control region variability
    • Fenn JD, Cameron SL, Whiting MF. 2007. The complete mitochondrial genome sequence of the Mormoncricket (Anabrus simplex:Tettigoniidae:Orthoptera) and an analysis of control region variability. Insect Mol. Biol. 16:239-52
    • (2007) Insect Mol. Biol , vol.16 , pp. 239-252
    • Fenn, J.D.1    Cameron, S.L.2    Whiting, M.F.3
  • 47
    • 52049118280 scopus 로고    scopus 로고
    • A preliminary mitochondrial genome phylogeny of orthoptera (insecta) and approaches to maximizing phylogenetic signal within mitochondrial genome data
    • Fenn JD, Song H, Cameron SL, WhitingMF. 2008. A preliminary mitochondrial genome phylogeny of Orthoptera (Insecta) and approaches to maximizing phylogenetic signal within mitochondrial genome data. Mol. Phylogenet. Evol. 49:59-68
    • (2008) Mol. Phylogenet. Evol , vol.49 , pp. 59-68
    • Fenn, J.D.1    Song, H.2    Cameron, S.L.3    Whiting, M.F.4
  • 48
    • 0033004743 scopus 로고    scopus 로고
    • Compositional bias may affect both dna-based and protein-based phylogenetic reconstructions
    • Foster PG, Hickey DA. 1999. Compositional bias may affect both DNA-based and protein-based phylogenetic reconstructions. J. Mol. Evol. 48:284-90
    • (1999) J. Mol. Evol , vol.48 , pp. 284-290
    • Foster, P.G.1    Hickey, D.A.2
  • 49
    • 0029619268 scopus 로고
    • The sequence, organisation and evolution of the Locusta migratoria mitochondrial genome
    • Flook PK, Rowell CHF, Gellissen G. 1995. The sequence, organisation and evolution of the Locusta migratoria mitochondrial genome. J. Mol. Evol. 41:928-41
    • (1995) J. Mol. Evol , vol.41 , pp. 928-941
    • Flook, P.K.1    Rowell, C.H.F.2    Gellissen, G.3
  • 50
    • 0031829758 scopus 로고    scopus 로고
    • Inferring pattern and process: Maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis
    • Galtier N, Guoy M. 1998. Inferring pattern and process: Maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis. Mol. Evol. Biol. 15:871-79
    • (1998) Mol. Evol. Biol , vol.15 , pp. 871-879
    • Galtier, N.1    Guoy, M.2
  • 51
    • 34247859220 scopus 로고    scopus 로고
    • Themitochondrial subgenomes of the nematode Globodera pallida are mosaics: Evidence of recombination in an animal mitochondrial genome
    • Gibson T, Blok VC, PhillipsMS, Hong G, Kumarasinghe D, et al. 2007. Themitochondrial subgenomes of the nematode Globodera pallida are mosaics: Evidence of recombination in an animal mitochondrial genome. J. Mol. Evol. 64:463-71
    • (2007) J. Mol. Evol , vol.64 , pp. 463-471
    • Gibson, T.1    Blok, V.C.2    Phillips, M.S.3    Hong, G.4    Kumarasinghe, D.5
  • 52
    • 77957341496 scopus 로고    scopus 로고
    • Mitochondrial genome evolution in fire ants (hymenoptera: Formicidae
    • Gotzek D, Clarke J, Shoemaker D. 2010. Mitochondrial genome evolution in fire ants (Hymenoptera: Formicidae). BMC Evol. Biol. 10:300
    • (2010) BMC Evol. Biol , vol.10 , pp. 300
    • Gotzek, D.1    Clarke, J.2    Shoemaker, D.3
  • 54
    • 84873739280 scopus 로고    scopus 로고
    • Mitogenome sequences stabilize the phylogenetics of weevils (curculionoidea) and establish the monophyly of larval ectophagy
    • Haran J, Timmermans MJTN, Vogler AP. 2013. Mitogenome sequences stabilize the phylogenetics of weevils (Curculionoidea) and establish the monophyly of larval ectophagy. Mol. Phylogenet. Evol. 67:156-66
    • (2013) Mol. Phylogenet. Evol , vol.67 , pp. 156-166
    • Haran, J.1    Timmermans, M.J.T.N.2    Vogler, A.P.3
  • 55
    • 79958226308 scopus 로고    scopus 로고
    • Complete mitochondrial genomes of normal and cheatermorphs in the parthenogenetic ant pristomyrmex punctatus (hymenoptera: Formicidae
    • Hasegawa E, Kobayashi K, Yagi N, Tsuji K. 2011. Complete mitochondrial genomes of normal and cheatermorphs in the parthenogenetic ant Pristomyrmex punctatus (Hymenoptera: Formicidae). Myrmecol. News 15:85-90
    • (2011) Myrmecol. News , vol.15 , pp. 85-90
    • Hasegawa, E.1    Kobayashi, K.2    Yagi, N.3    Tsuji, K.4
  • 56
    • 19044389661 scopus 로고    scopus 로고
    • Evidence for multiple reversals of asymmetric mutational constraints during the evolution of themitochondrial genome of metazoa, and consequences for phylogenetic inferences
    • Hassanin A, Ĺeger N, Deutsch J. 2005. Evidence for multiple reversals of asymmetric mutational constraints during the evolution of themitochondrial genome of Metazoa, and consequences for phylogenetic inferences. Syst. Biol. 54:277-98
    • (2005) Syst. Biol , vol.54 , pp. 277-298
    • Hassanin, A.1    Ĺeger, N.2    Deutsch, J.3
  • 59
    • 0142075820 scopus 로고    scopus 로고
    • The evolution of trna-leu genes in animal mitochondrial genomes
    • Higgs PG, Jameson D, Jow H, Rattray M. 2003. The evolution of tRNA-Leu genes in animal mitochondrial genomes. J. Mol. Evol. 57:435-45
    • (2003) J. Mol. Evol , vol.57 , pp. 435-445
    • Higgs, P.G.1    Jameson, D.2    Jow, H.3    Rattray, M.4
  • 60
    • 37549050969 scopus 로고    scopus 로고
    • A comprehensive phylogeny of beetles reveals the evolution origins of a superradiation
    • Hunt T, Bergsten J, Levkanicoa Z, Papadopoulou A, St John O, et al. 2007. A comprehensive phylogeny of beetles reveals the evolution origins of a superradiation. Science 318:1913-16
    • (2007) Science , vol.318 , pp. 1913-1916
    • Hunt, T.1    Bergsten, J.2    Levkanicoa, Z.3    Papadopoulou, A.4    St John, O.5
  • 61
    • 79951580071 scopus 로고    scopus 로고
    • Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences
    • Ishiwata K, Sasaki G, Ogawa J, Miyata T, Su ZH. 2011. Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences. Mol. Phylogenet. Evol. 58:169-80
    • (2011) Mol. Phylogenet. Evol , vol.58 , pp. 169-180
    • Ishiwata, K.1    Sasaki, G.2    Ogawa, J.3    Miyata, T.4    Su, Z.H.5
  • 63
    • 84858292395 scopus 로고    scopus 로고
    • Improved systematic tRNA gene annotation allows new insight into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements
    • Juhling F, Pütz J, Bernt M, Donath A, MiddendorfM, et al. 2012. Improved systematic tRNA gene annotation allows new insight into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements. Nucleic Acids Res. 40:2833-45
    • (2012) Nucleic Acids Res , vol.40 , pp. 2833-2845
    • Juhling, F.1    Pütz, J.2    Bernt, M.3    Donath, A.4    Middendorf, M.5
  • 64
    • 4444293341 scopus 로고    scopus 로고
    • The mitochondrial genome of the blowfly chrysomya chloropyga (diptera: Calliphoridae
    • Junqueira ACM, Lessinger AC, Torres TT, da Silva FR, Vettore AL, et al. 2004. The mitochondrial genome of the blowfly Chrysomya chloropyga (Diptera: Calliphoridae). Gene 339:7-15
    • (2004) Gene , vol.339 , pp. 7-15
    • Junqueira, A.C.M.1    Lessinger, A.C.2    Torres, T.T.3    Da Silva, F.R.4    Vettore, A.L.5
  • 65
    • 3242721251 scopus 로고    scopus 로고
    • Aligned 18S and insect phylogeny
    • Kjer KM. 2004. Aligned 18S and insect phylogeny. Syst. Biol. 53:506-14
    • (2004) Syst. Biol , vol.53 , pp. 506-514
    • Kjer, K.M.1
  • 67
    • 84857809841 scopus 로고    scopus 로고
    • Novel gene rearrangements in the mitochondrial genome of a webspinner aposthonia japonica (insecta: Embioptera
    • K̂omoto N, Yukuhiro K, Tomito S. 2012. Novel gene rearrangements in the mitochondrial genome of a webspinner, Aposthonia japonica (Insecta: Embioptera). Genome 55:222-33
    • (2012) Genome , vol.55 , pp. 222-233
    • K̂omoto, N.1    Yukuhiro, K.2    Tomito, S.3
  • 70
    • 84861380450 scopus 로고    scopus 로고
    • Partitionfinder: Combined selection of partitioning schemes and substitution models for phylogenetic analysis
    • Lanfear R, Calcott B, Ho SYW, Guindon S. 2012. PartitionFinder: Combined selection of partitioning schemes and substitution models for phylogenetic analysis. Mol. Biol. Evol. 29:1695-701
    • (2012) Mol. Biol. Evol , vol.29 , pp. 1695-1701
    • Lanfear, R.1    Calcott, B.2    Ho, S.Y.W.3    Guindon, S.4
  • 71
    • 0036146407 scopus 로고    scopus 로고
    • Complete mtdna sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: Duplication and non-random loss
    • Lavrov DV, Boore JL, Brown WM. 2002. Complete mtDNA sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: Duplication and non-random loss. Mol. Biol. Evol. 19:163-69
    • (2002) Mol. Biol. Evol , vol.19 , pp. 163-169
    • Lavrov, D.V.1    Boore, J.L.2    Brown, W.M.3
  • 72
    • 0034610287 scopus 로고    scopus 로고
    • A novel type of rna editing occurs in the mitochondrial trnas of the centipede lithobius forficatus
    • Lavrov DV, Brown WM, Boore JL. 2000. A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus. Proc. Natl. Acad. Sci. USA 97:13738-42
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 13738-13742
    • Lavrov, D.V.1    Brown, W.M.2    Boore, J.L.3
  • 73
    • 84877928220 scopus 로고    scopus 로고
    • Searching for the optimal data partitioning strategy in mitochondrial phylogenomics: A phylogeny of acridoidea (insecta: Orthoptera: Caelifera) as a case study
    • Leavitt JR, Hiatt KD, Whiting MF, Song H. 2013. Searching for the optimal data partitioning strategy in mitochondrial phylogenomics: A phylogeny of Acridoidea (Insecta: Orthoptera: Caelifera) as a case study. Mol. Phylogenet. Evol. 67:494-508
    • (2013) Mol. Phylogenet. Evol , vol.67 , pp. 494-508
    • Leavitt, J.R.1    Hiatt, K.D.2    Whiting, M.F.3    Song, H.4
  • 74
    • 84855327031 scopus 로고    scopus 로고
    • The complete mitochondrial genome and novel gene arrangement of the unique-headed bug stenopirates sp (hemiptera: Enicocephalidae
    • Li H, Liu H, Shi A, Stys P, Zhou Z, et al. 2012. The complete mitochondrial genome and novel gene arrangement of the unique-headed bug Stenopirates sp. (Hemiptera: Enicocephalidae). PLoSOne 7:e29419
    • (2012) PLoSOne , vol.7
    • Li, H.1    Liu, H.2    Shi, A.3    Stys, P.4    Zhou, Z.5
  • 75
    • 84873509045 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the stalk-eyed bug chauliops fallax scott, and the monophyly of malcidae (hemiptera: Heteroptera
    • Li T, Gao C, Cui Y, Xie Q, Bu W. 2013. The complete mitochondrial genome of the stalk-eyed bug Chauliops fallax Scott, and the monophyly of Malcidae (Hemiptera: Heteroptera). PLoS One 8:e55381
    • (2013) PLoS One , vol.8
    • Li, T.1    Gao, C.2    Cui, Y.3    Xie, Q.4    Bu, W.5
  • 76
    • 77957008885 scopus 로고    scopus 로고
    • The complete mitochondrial genome and phylogenomics of a damselfly euphaea formosa support a basal odonata within the pteygota
    • Lin CP, Chen MY, Huang JP. 2010. The complete mitochondrial genome and phylogenomics of a damselfly, Euphaea formosa support a basal Odonata within the Pteygota. Gene 468:20-29
    • (2010) Gene , vol.468 , pp. 20-29
    • Lin, C.P.1    Chen, M.Y.2    Huang, J.P.3
  • 77
    • 84865514262 scopus 로고    scopus 로고
    • Mitochondrial genomes reveal the global phylogeography and dispersal routes of the migratory locust
    • Ma C, Yang PC, Jiang F, Chapuis M-P, Shall Y, et al. 2012. Mitochondrial genomes reveal the global phylogeography and dispersal routes of the migratory locust. Mol. Ecol. 21:4344-58
    • (2012) Mol. Ecol , vol.21 , pp. 4344-4358
    • Ma, C.1    Yang, P.C.2    Jiang, F.3    Chapuis, M.-P.4    Shall, Y.5
  • 78
    • 84857882167 scopus 로고    scopus 로고
    • The first mitochondrial genome for the wasp superfamily platygastroidea: The egg parasitoid trissolcus basalis
    • Mao M, Valerio A, Austin AD, Dowton M, Johnson NF. 2012. The first mitochondrial genome for the wasp superfamily Platygastroidea: The egg parasitoid Trissolcus basalis. Genome 55:194-204
    • (2012) Genome , vol.55 , pp. 194-204
    • Mao, M.1    Valerio, A.2    Austin, A.D.3    Dowton, M.4    Johnson, N.F.5
  • 79
    • 44449132164 scopus 로고    scopus 로고
    • Parallel evolution of truncated transfer rna genes in arachnidmitochondrial genomes
    • Masta SE, Boore JL. 2008. Parallel evolution of truncated transfer RNA genes in arachnidmitochondrial genomes. Mol. Biol. Evol. 25:949-59
    • (2008) Mol. Biol. Evol , vol.25 , pp. 949-959
    • Masta, S.E.1    Boore, J.L.2
  • 80
    • 74049137196 scopus 로고    scopus 로고
    • The mitochondrial genome of the 'twisted-wing parasite' mengenilla australiensis (insecta, strepsiptera): A comparative study
    • McMahon DP, Hayward A, Kathirithamby J. 2009. The mitochondrial genome of the 'twisted-wing parasite' Mengenilla australiensis (Insecta, Strepsiptera): A comparative study. BMC Genomics 10:603
    • (2009) BMC Genomics , vol.10 , pp. 603
    • McMahon, D.P.1    Hayward, A.2    Kathirithamby, J.3
  • 81
    • 33644991512 scopus 로고    scopus 로고
    • Transmission ratio distortion in the human body louse, pediculus humanus (insecta: Phthiraptera
    • McMeniman CJ, Barker SC. 2006. Transmission ratio distortion in the human body louse, Pediculus humanus (Insecta: Phthiraptera). Heredity 96:63-68
    • (2006) Heredity , vol.96 , pp. 63-68
    • McMeniman, C.J.1    Barker, S.C.2
  • 82
    • 0023480940 scopus 로고
    • Evolution of animal mitochondrial dna: Relevance for population biology and systematics
    • Mortiz C, Dowling TE, Brown WM. 1987. Evolution of animal mitochondrial DNA: Relevance for population biology and systematics. Annu. Rev. Ecol. Syst. 18:269-92
    • (1987) Annu. Rev. Ecol. Syst , vol.18 , pp. 269-292
    • Mortiz, C.1    Dowling, T.E.2    Brown, W.M.3
  • 83
    • 1642465044 scopus 로고    scopus 로고
    • Evolution and phylogenetic utility of cad (rudimentary) among mesozoic-Aged eremoneuran diptera (insecta
    • Moulton JK, Wiegmann BM. 2004. Evolution and phylogenetic utility of CAD (rudimentary) among Mesozoic-Aged eremoneuran Diptera (Insecta). Mol. Phylogenet. Evol. 31:363-78
    • (2004) Mol. Phylogenet. Evol , vol.31 , pp. 363-378
    • Moulton, J.K.1    Wiegmann, B.M.2
  • 84
    • 0037810913 scopus 로고    scopus 로고
    • The value of idiosyncratic markers and changes to conserved trna sequences from themitochondrial genome of hard ticks (acari: Ixodida: Ixodidae) for phylogenetic inference
    • Murrell A, Campbell NJH, Barker SC. 2003. The value of idiosyncratic markers and changes to conserved tRNA sequences from themitochondrial genome of hard ticks (Acari: Ixodida: Ixodidae) for phylogenetic inference. Syst. Biol. 52:296-310
    • (2003) Syst. Biol , vol.52 , pp. 296-310
    • Murrell, A.1    Campbell, N.J.H.2    Barker, S.C.3
  • 85
    • 77956899994 scopus 로고    scopus 로고
    • Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies
    • Mutanen M,Wahlberg N, Kaila L. 2010. Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies. Proc. R. Soc. B 277:2839-48
    • (2010) Proc. R. Soc , vol.B277 , pp. 2839-2848
    • Mutanen, M.1    Wahlberg, N.2    Kaila, L.3
  • 86
    • 60549084522 scopus 로고    scopus 로고
    • Mitochondrial genome sequence and gene order of sipunculus nudus gives additional support for an inclusion of sipuncula into annelida
    • Mwinyi A, Meyer A, Bleidorn C, Lieb B, Bartolomaeus T, et al. 2009. Mitochondrial genome sequence and gene order of Sipunculus nudus gives additional support for an inclusion of Sipuncula into Annelida. BMC Genomics 10:27
    • (2009) BMC Genomics , vol.10 , pp. 27
    • Mwinyi, A.1    Meyer, A.2    Bleidorn, C.3    Lieb, B.4    Bartolomaeus, T.5
  • 88
    • 84868213202 scopus 로고    scopus 로고
    • Beyond barcoding: A mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (diptera: Calliphoridae
    • Nelson LA, Lambkin CL, Batterham P, Wallman JF, Dowton M, et al. 2012. Beyond barcoding: A mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (Diptera: Calliphoridae). Gene 511:131-42
    • (2012) Gene , vol.511 , pp. 131-142
    • Nelson, L.A.1    Lambkin, C.L.2    Batterham, P.3    Wallman, J.F.4    Dowton, M.5
  • 89
    • 0037208862 scopus 로고    scopus 로고
    • The evolution of alternative genetic systems in insects
    • Normark BB. 2003. The evolution of alternative genetic systems in insects. Annu. Rev. Entomol. 48:397-423
    • (2003) Annu. Rev. Entomol , vol.48 , pp. 397-423
    • Normark, B.B.1
  • 90
    • 0019444843 scopus 로고
    • Trna punctuation model of rna processing in human mitochondria
    • Ojala D, Montoyo J, Attardi G. 1981. tRNA punctuation model of RNA processing in human mitochondria. Nature 290:470-74
    • (1981) Nature , vol.290 , pp. 470-474
    • Ojala, D.1    Montoyo, J.2    Attardi, G.3
  • 91
    • 52449104857 scopus 로고    scopus 로고
    • Rapidly evolving mitochondrial genome and directional selection in mitochondrial genes in the parasitic wasp nasonia (hymenoptera: Pteromalidae
    • Oliveira DCSG, Raqchoundhury R, Lavrov DV, Werren JH. 2008. Rapidly evolving mitochondrial genome and directional selection in mitochondrial genes in the parasitic wasp Nasonia (Hymenoptera: Pteromalidae). Mol. Biol. Evol. 25:2167-80
    • (2008) Mol. Biol. Evol , vol.25 , pp. 2167-2180
    • Oliveira, D.C.S.G.1    Raqchoundhury, R.2    Lavrov, D.V.3    Werren, J.H.4
  • 92
    • 79951578321 scopus 로고    scopus 로고
    • Themitochondrial genome of bacillus stick insects (phasmatodea) and the phylogeny of orthopteroid insects
    • Plazzi F, Ricci A, PassamontiM. 2011. Themitochondrial genome of Bacillus stick insects (Phasmatodea) and the phylogeny of orthopteroid insects. Mol. Phylogenet. Evol. 58:304-16
    • (2011) Mol. Phylogenet. Evol , vol.58 , pp. 304-316
    • Plazzi, F.1    Ricci, A.2    Passamonti, M.3
  • 93
    • 0027995091 scopus 로고
    • Thermal habit, metabolic rate and the evolution of mitochondrial dna
    • Rand DM. 1994. Thermal habit, metabolic rate and the evolution of mitochondrial DNA. Trends Ecol. Evol. 9:125-31
    • (1994) Trends Ecol. Evol , vol.9 , pp. 125-131
    • Rand, D.M.1
  • 94
    • 34248149943 scopus 로고    scopus 로고
    • Bold: The barcode of life data system
    • Ratnasingham S, Hebert PDN. 2007. BOLD: The barcode of life data system. (www.barcodinglife.org). Mol. Ecol. Notes 7:355-64
    • (2007) Mol. Ecol. Notes , vol.7 , pp. 355-364
    • Ratnasingham, S.1    Hebert, P.D.N.2
  • 95
    • 58149236596 scopus 로고    scopus 로고
    • Resolving arthropod phylogeny: Exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence
    • Regier JC, Schultz JW, Ganley ARD, Hussey A, Shi D, et al. 2008. Resolving arthropod phylogeny: Exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence. Syst. Biol. 57:920-38
    • (2008) Syst. Biol , vol.57 , pp. 920-938
    • Regier, J.C.1    Schultz, J.W.2    Ganley, A.R.D.3    Hussey, A.4    Shi, D.5
  • 96
    • 72949097264 scopus 로고    scopus 로고
    • Toward reconstructing the evolution of advances moths and butterflies (lepidoptera: Ditrysia): An initial molecular study
    • Regier JC, Zwick A, Cummings MP, Kawahara AY, Cho S, et al. 2009. Toward reconstructing the evolution of advances moths and butterflies (Lepidoptera: Ditrysia): An initial molecular study. BMC Evol. Biol. 9:280
    • (2009) BMC Evol. Biol , vol.9 , pp. 280
    • Regier, J.C.1    Zwick, A.2    Cummings, M.P.3    Kawahara, A.Y.4    Cho, S.5
  • 97
    • 0031950474 scopus 로고    scopus 로고
    • Asymmetrical directional mutation pressure in the mitochondrial genome of mammals
    • Reyes A, Gissi C, Pesole G, Saccone C. 1998. Asymmetrical directional mutation pressure in the mitochondrial genome of mammals. Mol. Biol. Evol. 15:957-66
    • (1998) Mol. Biol. Evol , vol.15 , pp. 957-966
    • Reyes, A.1    Gissi, C.2    Pesole, G.3    Saccone, C.4
  • 98
    • 0033793019 scopus 로고    scopus 로고
    • Rare genomic changes as a tool for phylogenetics
    • Rokas A, Holland PWH. 2000. Rare genomic changes as a tool for phylogenetics. Trends Ecol. Evol. 15:454-59
    • (2000) Trends Ecol. Evol , vol.15 , pp. 454-459
    • Rokas, A.1    Holland, P.W.H.2
  • 99
    • 77956392555 scopus 로고    scopus 로고
    • Ecdysozoan mitogenomics: Evidence for a common origin of the legged invertebrates, the panarthropoda
    • Rota-Stabelli O, Kayal E,Gleeson D, Daub J, Boore JL, et al. 2010. Ecdysozoan mitogenomics: Evidence for a common origin of the legged invertebrates, the Panarthropoda. Genome Biol. Evol. 2:425-40
    • (2010) Genome Biol. Evol , vol.2 , pp. 425-440
    • Rota-Stabelli, O.1    Kayal, E.2    Gleeson, D.3    Daub, J.4    Boore, J.L.5
  • 100
    • 67349159068 scopus 로고    scopus 로고
    • Mtzoa: A general mitochondrial amino acid substitutions model for animal evolutionary studies
    • Rota-Stabelli O, Yang Z, Telford MJ. 2009. MtZoa: A general mitochondrial amino acid substitutions model for animal evolutionary studies. Mol. Phylogenet. Evol. 52:268-72
    • (2009) Mol. Phylogenet. Evol , vol.52 , pp. 268-272
    • Rota-Stabelli, O.1    Yang, Z.2    Telford, M.J.3
  • 101
    • 48249119889 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the bag-shelter moth ochrogaster lunifer (lepidoptera: Notodontidae
    • Salvato P, Simonato M, Battisti A, Negrisolo E. 2008. The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera: Notodontidae). BMC Genomics 9:331
    • (2008) BMC Genomics , vol.9 , pp. 331
    • Salvato, P.1    Simonato, M.2    Battisti, A.3    Negrisolo, E.4
  • 102
    • 0037359951 scopus 로고    scopus 로고
    • The highly rearranged mitochondrial genome of the plague thrips, thrips imaginis (insecta: Thysanoptera): Convergence of two novel gene boundaries and an extraordinary arrangement of rrna genes
    • Shao R, Barker SC. 2003. The highly rearranged mitochondrial genome of the plague thrips, Thrips imaginis (Insecta: Thysanoptera): Convergence of two novel gene boundaries and an extraordinary arrangement of rRNA genes. Mol. Biol. Evol. 20:362-70
    • (2003) Mol. Biol. Evol , vol.20 , pp. 362-370
    • Shao, R.1    Barker, S.C.2
  • 103
    • 79251622678 scopus 로고    scopus 로고
    • Chimeric mitochondrial minichromosomes of the human body louse pediculus humanus: Evidence for homologous and non-homologous recombination
    • Shao R, Barker SC. 2011. Chimeric mitochondrial minichromosomes of the human body louse, Pediculus humanus: Evidence for homologous and non-homologous recombination. Gene 473:36-43
    • (2011) Gene , vol.473 , pp. 36-43
    • Shao, R.1    Barker, S.C.2
  • 104
    • 14544298002 scopus 로고    scopus 로고
    • Evolution of duplicate control regions in the mitochondrial genomes ofmetazoan: A case study with Australasian Ixodes ticks
    • Shao R, Barker SC, Mitani H, Aoki Y, Fukunaga M. 2005. Evolution of duplicate control regions in the mitochondrial genomes ofmetazoan: A case study with Australasian Ixodes ticks. Mol. Biol. Evol. 22:620-29
    • (2005) Mol. Biol. Evol , vol.22 , pp. 620-629
    • Shao, R.1    Barker, S.C.2    Mitani, H.3    Aoki, Y.4    Fukunaga, M.5
  • 105
    • 0035038162 scopus 로고    scopus 로고
    • Numerous gene rearrangements in themitochondrial genome of the wallaby louse, Heterodoxus macropus (Phthiraptera
    • Shao R,Campbell NJH, Barker SC. 2001. Numerous gene rearrangements in themitochondrial genome of the wallaby louse, Heterodoxus macropus (Phthiraptera). Mol. Biol. Evol. 18:858-65
    • (2001) Mol. Biol. Evol , vol.18 , pp. 858-865
    • Shao, R.1    Campbell, N.J.H.2    Barker, S.C.3
  • 106
    • 2542462934 scopus 로고    scopus 로고
    • Rates of gene rearrangements and nucleotide substitution are correlated in the mitochondrial genomes of insects
    • Shao R, Dowton M, Murrell A, Barker SC. 2003. Rates of gene rearrangements and nucleotide substitution are correlated in the mitochondrial genomes of insects. Mol. Biol. Evol. 20:1612-19
    • (2003) Mol. Biol. Evol , vol.20 , pp. 1612-1619
    • Shao, R.1    Dowton, M.2    Murrell, A.3    Barker, S.C.4
  • 107
    • 66049102115 scopus 로고    scopus 로고
    • The single mitochondrial chromosome typical of animals has evolved into 18 minichromosomes in the human body louse, Pediculus humanus
    • Shao R, Kirkness EF, Barker SC. 2009. The single mitochondrial chromosome typical of animals has evolved into 18 minichromosomes in the human body louse, Pediculus humanus. Genome Res. 19:904-12
    • (2009) Genome Res , vol.19 , pp. 904-912
    • Shao, R.1    Kirkness, E.F.2    Barker, S.C.3
  • 108
    • 84876062140 scopus 로고    scopus 로고
    • Evolution of extensively fragmentedmitochondrial genomes in the lice of humans
    • ShaoR,Zhu X-Q, Barker SC,HerdK. 2012. Evolution of extensively fragmentedmitochondrial genomes in the lice of humans. Genome Biol. Evol. 4:1088-101
    • (2012) Genome Biol. Evol , vol.4 , pp. 1088-1101
    • Shao, R.1    Zhu, X.-Q.2    Barker, S.C.3    Herd, K.4
  • 109
    • 70349434888 scopus 로고    scopus 로고
    • Nonstationary evolution and compositional heterogeneity in beetle mitochondrial phylogenomics
    • Sheffield NC, Song H, Cameron SL, Whiting MF. 2009. Nonstationary evolution and compositional heterogeneity in beetle mitochondrial phylogenomics. Syst. Biol. 58:381-94
    • (2009) Syst. Biol , vol.58 , pp. 381-394
    • Sheffield, N.C.1    Song, H.2    Cameron, S.L.3    Whiting, M.F.4
  • 110
    • 46649109951 scopus 로고    scopus 로고
    • Themitochondrial genome of the stingless bee melipona bicolour (hymenoptera, apidae,meliponini): Sequence, gene organisation and a unique trna translocation event conserved across the tribe meliponini
    • SilvestreD,DowtonM, Arias MC. 2008. Themitochondrial genome of the stingless bee Melipona bicolour (Hymenoptera, Apidae,Meliponini): Sequence, gene organisation and a unique tRNA translocation event conserved across the tribe Meliponini. Genet. Mol. Biol. 31:451-60
    • (2008) Genet. Mol. Biol , vol.31 , pp. 451-460
    • Silvestre, D.1    Dowton, M.2    Arias, M.C.3
  • 111
    • 78649873812 scopus 로고    scopus 로고
    • When phylogenetic assumptions are violated: Base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics
    • Song H, Sheffield NC, Cameron SL, Miller KB, Whiting MF. 2010. When phylogenetic assumptions are violated: Base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics. Syst. Entomol. 35:429-48
    • (2010) Syst. Entomol , vol.35 , pp. 429-448
    • Song, H.1    Sheffield, N.C.2    Cameron, S.L.3    Miller, K.B.4    Whiting, M.F.5
  • 112
    • 84869037796 scopus 로고    scopus 로고
    • A molecular phylogeny of Hemiptera inferred from mitochondrial genome sequences
    • Song N, Liang A-P, Bu C-P. 2012. A molecular phylogeny of Hemiptera inferred from mitochondrial genome sequences. PLoS One 7:e48778
    • (2012) PLoS One , vol.7
    • Song, N.1    Liang, A.-P.2    Bu, C.-P.3
  • 113
    • 44649188614 scopus 로고    scopus 로고
    • Two circular chromosomes of unequal copy number make up the mitochondrial genome of the rotifer brachionus plicatilis
    • Suga K, Welch DBM, Tanaka Y, Sakakura Y, Hagiwarak A. 2008. Two circular chromosomes of unequal copy number make up the mitochondrial genome of the rotifer Brachionus plicatilis. Mol. Biol. Evol. 25:1129-37
    • (2008) Mol. Biol. Evol , vol.25 , pp. 1129-1137
    • Suga, K.1    Welch, D.B.M.2    Tanaka, Y.3    Sakakura, Y.4    Hagiwarak, A.5
  • 114
    • 80051653324 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the asiatic cavity-nesting honeybee apis cerana (hymenoptera: Apidae
    • Tan H-W, Liu G-H, Dong X, Lin R-Q, Song H-Q, et al. 2011. The complete mitochondrial genome of the Asiatic cavity-nesting honeybee Apis cerana (Hymenoptera: Apidae). PLoS One 6:e23008
    • (2011) PLoS One , vol.6
    • Tan, H.-W.1    Liu, G.-H.2    Dong, X.3    Lin, R.-Q.4    Song, H.-Q.5
  • 115
  • 116
    • 27544465843 scopus 로고    scopus 로고
    • Comparison of two alignment techniques within a single complex data set: Poy versus clustal
    • Terry MD,Whiting MF. 2005. Comparison of two alignment techniques within a single complex data set: POY versus Clustal. Cladistics 21:272-81
    • (2005) Cladistics , vol.21 , pp. 272-281
    • Terry, M.D.1    Whiting, M.F.2
  • 117
    • 27544464722 scopus 로고    scopus 로고
    • Mantophasmatodea and phylogeny of the lower neopterous insects
    • Terry MD, Whiting MF. 2005. Mantophasmatodea and phylogeny of the lower neopterous insects. Cladistics 21:240-57
    • (2005) Cladistics , vol.21 , pp. 240-257
    • Terry, M.D.1    Whiting, M.F.2
  • 118
    • 5444246169 scopus 로고    scopus 로고
    • Organization of the mitochondrial genomes of whiteflies, aphids and pysillids (hemiptera: Sternorrhyncha
    • Thao ML, Baumann L, Baumann P. 2004. Organization of the mitochondrial genomes of whiteflies, aphids and pysillids (Hemiptera: Sternorrhyncha). BMC Evol. Biol. 4:25
    • (2004) BMC Evol. Biol , vol.4 , pp. 25
    • Thao, M.L.1    Baumann, L.2    Baumann, P.3
  • 119
  • 120
    • 84858079447 scopus 로고    scopus 로고
    • Phylogenetically informative rearrangements in mitochondrial genomes of coleoptera, and monophyly of aquatic elateriform beetles (dryopoidea
    • Timmermans MJTN, Vogler AP. 2012. Phylogenetically informative rearrangements in mitochondrial genomes of Coleoptera, and monophyly of aquatic elateriform beetles (Dryopoidea). Mol. Phylogenet. Evol. 63:299-304
    • (2012) Mol. Phylogenet. Evol , vol.63 , pp. 299-304
    • Timmermans, M.J.T.N.1    Vogler, A.P.2
  • 122
    • 23844558266 scopus 로고    scopus 로고
    • A mitochondrial paradigm of metabolic and degenerative diseases, aging and cancer: A dawn for evolutionary medicine
    • Wallace DC. 2005. A mitochondrial paradigm of metabolic and degenerative diseases, aging and cancer: A dawn for evolutionary medicine. Annu. Rev. Genet. 39:359-407
    • (2005) Annu. Rev. Genet , vol.39 , pp. 359-407
    • Wallace, D.C.1
  • 123
    • 84864650156 scopus 로고    scopus 로고
    • Complete mitochondrial genome of the free-living earwig challia fletcheri (dermaptera: Pygidicranidae) and phylogeny of polyneoptera
    • Wan X, Kim MI, Kim MJ, Kim I. 2012. Complete mitochondrial genome of the free-living earwig, Challia fletcheri (Dermaptera: Pygidicranidae) and phylogeny of Polyneoptera. PLoS One 7:e42056
    • (2012) PLoS One , vol.7
    • Wan, X.1    Kim, M.I.2    Kim, M.J.3    Kim, I.4
  • 124
    • 84867314127 scopus 로고    scopus 로고
    • The first mitochondrial genome for the fishfly subfamily chauliodinae and implications for the higher phylogeny of megaloptera
    • Wang Y, Liu X,Winterton SL, Yang D. 2012. The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera. PLoS One 7:e47302
    • (2012) PLoS One , vol.7
    • Wang, Y.1    Liu, X.2    Winterton, S.L.3    Yang, D.4
  • 125
    • 84859143923 scopus 로고    scopus 로고
    • The multipartite mitochondrial genome of Liposcelis bostrychophila: Insights into the evolution of mitochondrial genomes in bilaterian animals
    • Wei DD, Shao R, Yuan M-L, Dou W, Barker SC, et al. 2012. The multipartite mitochondrial genome of Liposcelis bostrychophila: Insights into the evolution of mitochondrial genomes in bilaterian animals. PLoS One 7:e33973
    • (2012) PLoS One , vol.7
    • Wei, D.D.1    Shao, R.2    Yuan, M.-L.3    Dou, W.4    Barker, S.C.5
  • 126
    • 77953313931 scopus 로고    scopus 로고
    • Comparative mitogenomics of braconidae (insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to holometabolous insects
    • Wei S-J, Shi M, Sharkey MJ, van Achterberg C, Chen X-X. 2010. Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to holometabolous insects. BMC Genomics 11:371
    • (2010) BMC Genomics , vol.11 , pp. 371
    • Wei, S.-J.1    Shi, M.2    Sharkey, M.J.3    Van Achterberg, C.4    Chen, X.-X.5
  • 129
    • 49749132106 scopus 로고    scopus 로고
    • Evaluating nuclear protein-coding genes for phylogenetic utility in beetles
    • Wild AL, Maddison DR. 2008. Evaluating nuclear protein-coding genes for phylogenetic utility in beetles. Mol. Phylogenet. Evol. 48:877-91
    • (2008) Mol. Phylogenet. Evol , vol.48 , pp. 877-891
    • Wild, A.L.1    Maddison, D.R.2
  • 130
    • 77954258353 scopus 로고    scopus 로고
    • On wings of lace: Phylogeny and bayesian divergence time estimates of neuropterida (insecta) based on morphological and molecular data
    • Winterton SL, Hardy NB, Wiegmann BM. 2010. On wings of lace: Phylogeny and Bayesian divergence time estimates of Neuropterida (Insecta) based on morphological and molecular data. Syst. Entomol. 35:349-78
    • (2010) Syst. Entomol , vol.35 , pp. 349-378
    • Winterton, S.L.1    Hardy, N.B.2    Wiegmann, B.M.3
  • 131
    • 0027083319 scopus 로고
    • Animal mitochondrial DNA: Structure and evolution
    • WolstenholmeDR. 1992. Animal mitochondrial DNA: Structure and evolution. Int. Rev. Cytol. 141:173-216
    • (1992) Int. Rev. Cytol , vol.141 , pp. 173-216
    • Wolstenholme, D.R.1
  • 132
    • 84862809371 scopus 로고    scopus 로고
    • Complete mitochondrial genomes of two cockroaches, Blatella germanica and Periplaneta americana, and the phylogenetic position of termites
    • Xiao B, Chen A-H, Zhang Y-Y, Jiang G-F, Hu C-C, et al. 2012. Complete mitochondrial genomes of two cockroaches, Blatella germanica and Periplaneta americana, and the phylogenetic position of termites. Curr. Genet. 58:65-77
    • (2012) Curr. Genet , vol.58 , pp. 65-77
    • Xiao, B.1    Chen, A.-H.2    Zhang, Y.-Y.3    Jiang, G.-F.4    Hu, C.-C.5
  • 133
    • 80355123621 scopus 로고    scopus 로고
    • Rapid evolution of the mitochondrial genome in chalcidoid wasps (hymenoptera: Chalcidoidea) driven by parasitic lifestyles
    • Xiao J-H, Jia J-G, Murphy RW, Huang D-W. 2011. Rapid evolution of the mitochondrial genome in chalcidoid wasps (Hymenoptera: Chalcidoidea) driven by parasitic lifestyles. PLoS One 6:e26645
    • (2011) PLoS One , vol.6
    • Xiao, J.-H.1    Jia, J.-G.2    Murphy, R.W.3    Huang, D.-W.4
  • 134
    • 84864500367 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the western flower thrips frankliniella occidentalis (thysanoptera: Thripidae) contains triplicate putative control regions
    • Yan D, Tang Y, Xue X, Wang M, Liu F, et al. 2012. The complete mitochondrial genome of the western flower thrips Frankliniella occidentalis (Thysanoptera: Thripidae) contains triplicate putative control regions. Gene 506:117-24
    • (2012) Gene , vol.506 , pp. 117-124
    • Yan, D.1    Tang, Y.2    Xue, X.3    Wang, M.4    Liu, F.5
  • 135
    • 67651096044 scopus 로고    scopus 로고
    • The complete nucleotide sequence of the mitochondrial genome of phthonandria atrilineata (lepidoptera: Geometridae
    • Yang L, Wei Z-J, Hong G-Y, Jiang S-T, Wen L-P. 2009. The complete nucleotide sequence of the mitochondrial genome of Phthonandria atrilineata (Lepidoptera: Geometridae). Mol. Biol. Rep. 36:1441-49
    • (2009) Mol. Biol. Rep , vol.36 , pp. 1441-1449
    • Yang, L.1    Wei, Z.-J.2    Hong, G.-Y.3    Jiang, S.-T.4    Wen, L.-P.5
  • 136
    • 84872498749 scopus 로고    scopus 로고
    • The complete mitochondrial genome of biston panterinaria (lepidoptera: Geometridae), with phylogenetic utility of mitochondrial genome in lepidoptera
    • Yang X, Xue D, Han H. 2013. The complete mitochondrial genome of Biston panterinaria (Lepidoptera: Geometridae), with phylogenetic utility of mitochondrial genome in Lepidoptera. Gene 515:349-58
    • (2013) Gene , vol.515 , pp. 349-358
    • Yang, X.1    Xue, D.2    Han, H.3
  • 137
    • 0030451420 scopus 로고    scopus 로고
    • Among-site rate variation and its impact on phylogenetic analyses
    • Yang Z. 1996. Among-site rate variation and its impact on phylogenetic analyses. Trends Ecol. Evol. 11:367-72
    • (1996) Trends Ecol. Evol , vol.11 , pp. 367-372
    • Yang, Z.1
  • 138
    • 84861154887 scopus 로고    scopus 로고
    • A view from the edge of the forest: Recent progress in understanding the relationships of the insect orders
    • Yeates DK, Cameron SL, Trautwein M. 2012. A view from the edge of the forest: Recent progress in understanding the relationships of the insect orders. Aust. J. Entomol. 51:79-87
    • (2012) Aust. J. Entomol , vol.51 , pp. 79-87
    • Yeates, D.K.1    Cameron, S.L.2    Trautwein, M.3
  • 139
    • 52949135158 scopus 로고    scopus 로고
    • The complete mitochondrial genome of parafronurus youi (insecta: Ephemeroptera) and phylogenetic position of the ephemeroptera
    • Zhang J, Zhou C, Gai Y, Song D, Zhou K. 2008. The complete mitochondrial genome of Parafronurus youi (Insecta: Ephemeroptera) and phylogenetic position of the Ephemeroptera. Gene 424:18-24
    • (2008) Gene , vol.424 , pp. 18-24
    • Zhang, J.1    Zhou, C.2    Gai, Y.3    Song, D.4    Zhou, K.5
  • 140
    • 77956947503 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the cockroach eupolyphaga sinensis (blattaria: Polyphagidae) and the phylogenetic relationships within dictyoptera
    • Zhang Y-Y, XuanW-J, Zhao J-L, Zhu C-D, Jiang G-F. 2010. The complete mitochondrial genome of the cockroach Eupolyphaga sinensis (Blattaria: Polyphagidae) and the phylogenetic relationships within Dictyoptera. Mol. Biol. Rep. 37:3509-16
    • (2010) Mol. Biol. Rep , vol.37 , pp. 3509-3516
    • Zhang, Y.-Y.1    Xuan, W.-J.2    Zhao, J.-L.3    Zhu, C.-D.4    Jiang, G.-F.5
  • 141
    • 84878148140 scopus 로고    scopus 로고
    • Ancestral gene organization in the mitochondrial genome of thyridosmylus langii (mclachlan 1870) (neuroptera: Osmylidae) and implications for lacewing evolution
    • Zhao J, Li H, Winterton SL, Liu Z. 2013. Ancestral gene organization in the mitochondrial genome of Thyridosmylus langii (McLachlan, 1870) (Neuroptera: Osmylidae) and implications for lacewing evolution. PLoS One 8:e62943
    • (2013) PLoS One , vol.8
    • Zhao, J.1    Li, H.2    Winterton, S.L.3    Liu, Z.4


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