메뉴 건너뛰기




Volumn 8, Issue 5, 2013, Pages

Ancestral Gene Organization in the Mitochondrial Genome of Thyridosmylus langii (McLachlan, 1870) (Neuroptera: Osmylidae) and Implications for Lacewing Evolution

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; TRANSFER RNA;

EID: 84878148140     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0062943     Document Type: Article
Times cited : (38)

References (59)
  • 1
    • 48249119889 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera, Notodontidae)
    • Salvato P, Simonato M, Battisti A, Negrisolo E, (2008) The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera, Notodontidae). BMC genomics 9: 331.
    • (2008) BMC Genomics , vol.9 , pp. 331
    • Salvato, P.1    Simonato, M.2    Battisti, A.3    Negrisolo, E.4
  • 2
    • 0023496815 scopus 로고
    • Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics
    • Avise JC, Arnold J, Ball RM, Bermingham E, Lamb T, et al. (1987) Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annu Rev Ecol Syst 18: 489-522.
    • (1987) Annu Rev Ecol Syst , vol.18 , pp. 489-522
    • Avise, J.C.1    Arnold, J.2    Ball, R.M.3    Bermingham, E.4    Lamb, T.5
  • 3
    • 0033561361 scopus 로고    scopus 로고
    • Animal mitochondrial genomes
    • Boore JL, (1999) Animal mitochondrial genomes. Nucleic Acids Res 27: 1767-1780.
    • (1999) Nucleic Acids Res , vol.27 , pp. 1767-1780
    • Boore, J.L.1
  • 4
    • 54149095095 scopus 로고    scopus 로고
    • A comparative analysis of mitochondrial genomes in Coleoptera (Arthropoda: Insecta) and genome descriptions of six new beetles
    • Sheffield NC, Song H, Cameron SL, Whiting MF, (2008) A comparative analysis of mitochondrial genomes in Coleoptera (Arthropoda: Insecta) and genome descriptions of six new beetles. Mol Biol Evol 25: 2499-2509.
    • (2008) Mol Biol Evol , vol.25 , pp. 2499-2509
    • Sheffield, N.C.1    Song, H.2    Cameron, S.L.3    Whiting, M.F.4
  • 5
    • 0024351697 scopus 로고
    • Mitochondrial DNA in the bark weevils: size, structure and heteroplasmy
    • Boyce TM, Zwick ME, Aquadro CF, (1989) Mitochondrial DNA in the bark weevils: size, structure and heteroplasmy. Genetics 123: 825-836.
    • (1989) Genetics , vol.123 , pp. 825-836
    • Boyce, T.M.1    Zwick, M.E.2    Aquadro, C.F.3
  • 6
    • 38949118287 scopus 로고    scopus 로고
    • Codon usage in mitochondrial genomes: distinguishing context-dependent mutation from translational selection
    • Jia W, Higgs PG, (2008) Codon usage in mitochondrial genomes: distinguishing context-dependent mutation from translational selection. Mol Biol Evol 25: 339-351.
    • (2008) Mol Biol Evol , vol.25 , pp. 339-351
    • Jia, W.1    Higgs, P.G.2
  • 7
    • 77954259618 scopus 로고    scopus 로고
    • Phylogeny of moth lacewings and giant lacewings (Neuroptera: Ithonidae, Polystoechotidae) using DNA sequence data, morphology, and fossils
    • Winterton SL, Makarkin VN, (2010) Phylogeny of moth lacewings and giant lacewings (Neuroptera: Ithonidae, Polystoechotidae) using DNA sequence data, morphology, and fossils. Ann Entomol Soc Am 103: 511-522.
    • (2010) Ann Entomol Soc Am , vol.103 , pp. 511-522
    • Winterton, S.L.1    Makarkin, V.N.2
  • 8
    • 77954258353 scopus 로고    scopus 로고
    • On wings of lace: phylogeny and Bayesian divergence time estimates of Neuropterida (Insecta) based on morphological and molecular data
    • Winterton SL, Hardy NB, Wiegmann BM, (2010) On wings of lace: phylogeny and Bayesian divergence time estimates of Neuropterida (Insecta) based on morphological and molecular data. Syst Entomol 35: 349-378.
    • (2010) Syst Entomol , vol.35 , pp. 349-378
    • Winterton, S.L.1    Hardy, N.B.2    Wiegmann, B.M.3
  • 9
    • 0033403477 scopus 로고    scopus 로고
    • Phylogeny of endopteryygote insects, the most successful lineage of living organisms
    • Kristensen NP, (1999) Phylogeny of endopteryygote insects, the most successful lineage of living organisms. Eur J Entomol 96: 237-254.
    • (1999) Eur J Entomol , vol.96 , pp. 237-254
    • Kristensen, N.P.1
  • 12
    • 3042824610 scopus 로고    scopus 로고
    • Phylogeny of the Neuropterida: a first molecular approach
    • Haring E, Aspöck U, (2004) Phylogeny of the Neuropterida: a first molecular approach. Syst Entomol 29: 415-430.
    • (2004) Syst Entomol , vol.29 , pp. 415-430
    • Haring, E.1    Aspöck, U.2
  • 13
    • 38149033501 scopus 로고    scopus 로고
    • Phylogenetic relevance of the genital sclerites of Neuropterida (Insecta: Holometabola)
    • Aspöck U, Aspöck H, (2008) Phylogenetic relevance of the genital sclerites of Neuropterida (Insecta: Holometabola). Syst Entomol 33: 97-127.
    • (2008) Syst Entomol , vol.33 , pp. 97-127
    • Aspöck, U.1    Aspöck, H.2
  • 14
    • 68149126139 scopus 로고    scopus 로고
    • The mitochondrial genome of Protohermes concolorus Yang et Yang 1988 (Insecta: Megaloptera: Corydalidae)
    • Hua J, Li M, Dong P, Xie Q, Bu W, (2009) The mitochondrial genome of Protohermes concolorus Yang et Yang 1988 (Insecta: Megaloptera: Corydalidae). Mol Biol Rep 36: 1757-1765.
    • (2009) Mol Biol Rep , vol.36 , pp. 1757-1765
    • Hua, J.1    Li, M.2    Dong, P.3    Xie, Q.4    Bu, W.5
  • 15
    • 70350179971 scopus 로고    scopus 로고
    • A mitochondrial genome phylogeny of the Neuropterida (lace-wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders
    • Cameron SL, Sullivan J, Song H, Miller KB, Whiting MF, (2009) A mitochondrial genome phylogeny of the Neuropterida (lace-wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders. Zool Scr 38: 575-590.
    • (2009) Zool Scr , vol.38 , pp. 575-590
    • Cameron, S.L.1    Sullivan, J.2    Song, H.3    Miller, K.B.4    Whiting, M.F.5
  • 16
    • 84867314127 scopus 로고    scopus 로고
    • The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera
    • Wang Y, Liu X, Winterton SL, Yang D, (2012) The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera. PLoS ONE 7: e47302.
    • (2012) PLoS ONE , vol.7
    • Wang, Y.1    Liu, X.2    Winterton, S.L.3    Yang, D.4
  • 17
    • 65349145800 scopus 로고    scopus 로고
    • Insect mitochondrial genomics 3: the complete mitochondrial genome sequences of representatives from two neuropteroid orders: a dobsonfly (order Megaloptera) and a giant lacewing and an owlfly (order Neuroptera)
    • Beckenbach ATBA, Stewart JBSJ, (2008) Insect mitochondrial genomics 3: the complete mitochondrial genome sequences of representatives from two neuropteroid orders: a dobsonfly (order Megaloptera) and a giant lacewing and an owlfly (order Neuroptera). Genome 52: 31-38.
    • (2008) Genome , vol.52 , pp. 31-38
    • Beckenbach, A.T.B.A.1    Stewart, J.B.S.J.2
  • 18
    • 79955725073 scopus 로고    scopus 로고
    • The mitochondrial genome of the ascalaphid owlfly Libelloides macaronius and comparative evolutionary mitochondriomics of neuropterid insects
    • Negrisolo E, Babbucci M, Patarnello T, (2011) The mitochondrial genome of the ascalaphid owlfly Libelloides macaronius and comparative evolutionary mitochondriomics of neuropterid insects. BMC genomics 12: 221.
    • (2011) BMC Genomics , vol.12 , pp. 221
    • Negrisolo, E.1    Babbucci, M.2    Patarnello, T.3
  • 19
    • 80052473604 scopus 로고    scopus 로고
    • Complete mitochondrial genomes of two green lacewings, Chrysoperla nipponensis (Okamoto, 1914) and Apochrysa matsumurae Okamoto, 1912 (Neuroptera: Chrysopidae)
    • Haruyama N, Mochizuki A, Sato Y, Naka H, Nomura M, (2011) Complete mitochondrial genomes of two green lacewings, Chrysoperla nipponensis (Okamoto, 1914) and Apochrysa matsumurae Okamoto, 1912 (Neuroptera: Chrysopidae). Mol Biol Rep 38: 3367-3373.
    • (2011) Mol Biol Rep , vol.38 , pp. 3367-3373
    • Haruyama, N.1    Mochizuki, A.2    Sato, Y.3    Naka, H.4    Nomura, M.5
  • 20
    • 0035133263 scopus 로고    scopus 로고
    • Cladistic analysis of Neuroptera and their systematic position within Neuropterida (Insecta: Holometabola: Neuropterida: Neuroptera)
    • Aspöck U, Plant JD, Nemeschkal HL, (2001) Cladistic analysis of Neuroptera and their systematic position within Neuropterida (Insecta: Holometabola: Neuropterida: Neuroptera). Syst Entomol 26: 73-86.
    • (2001) Syst Entomol , vol.26 , pp. 73-86
    • Aspöck, U.1    Plant, J.D.2    Nemeschkal, H.L.3
  • 21
    • 24744442601 scopus 로고    scopus 로고
    • Molecular mechanisms of extensive mitochondrial gene rearrangement in plethodontid salamanders
    • Mueller RL, Boore JL, (2005) Molecular mechanisms of extensive mitochondrial gene rearrangement in plethodontid salamanders. Mol Biol Evol 22: 2104-2112.
    • (2005) Mol Biol Evol , vol.22 , pp. 2104-2112
    • Mueller, R.L.1    Boore, J.L.2
  • 22
    • 79960999871 scopus 로고    scopus 로고
    • The architecture and complete sequence of mitochondrial genome of an assassin bug Agriosphodrus dohrni (Hemiptera: Reduviidae)
    • Li H, Gao J, Liu H, Liu H, Liang A, et al. (2011) The architecture and complete sequence of mitochondrial genome of an assassin bug Agriosphodrus dohrni (Hemiptera: Reduviidae). Int J Biol Sci 7: 792.
    • (2011) Int J Biol Sci , vol.7 , pp. 792
    • Li, H.1    Gao, J.2    Liu, H.3    Liu, H.4    Liang, A.5
  • 23
    • 75649132877 scopus 로고    scopus 로고
    • Analysis of the mitochondrial genome of Schistocerca gregaria (Orthoptera: Acrididae)
    • Erler S, Ferenz HJ, Moritz RFA, Kaatz HH, (2010) Analysis of the mitochondrial genome of Schistocerca gregaria (Orthoptera: Acrididae). Biol J Linn Soc 99: 296-305.
    • (2010) Biol J Linn Soc , vol.99 , pp. 296-305
    • Erler, S.1    Ferenz, H.J.2    Moritz, R.F.A.3    Kaatz, H.H.4
  • 24
    • 34249295963 scopus 로고    scopus 로고
    • The complete nucleotide sequence of the mitochondrial genome of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae)
    • Yu DJ, Xu L, Nardi F, Li JG, Zhang RJ, (2007) The complete nucleotide sequence of the mitochondrial genome of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae). Gene 396: 66-74.
    • (2007) Gene , vol.396 , pp. 66-74
    • Yu, D.J.1    Xu, L.2    Nardi, F.3    Li, J.G.4    Zhang, R.J.5
  • 25
    • 84855327031 scopus 로고    scopus 로고
    • The complete mitochondrial genome and novel gene arrangement of the unique-headed bug Stenopirates sp.(Hemiptera: Enicocephalidae)
    • Li H, Liu H, Shi A, Štys P, Zhou X, et al. (2012) The complete mitochondrial genome and novel gene arrangement of the unique-headed bug Stenopirates sp.(Hemiptera: Enicocephalidae). PloS one 7: e29419.
    • (2012) PloS One , vol.7
    • Li, H.1    Liu, H.2    Shi, A.3    Štys, P.4    Zhou, X.5
  • 26
    • 84867025875 scopus 로고    scopus 로고
    • Comparative mitogenomic analysis of damsel bugs representing three tribes in the family Nabidae (Insecta: Hemiptera)
    • Li H, Liu H, Song F, Shi A, Zhou X, et al. (2012) Comparative mitogenomic analysis of damsel bugs representing three tribes in the family Nabidae (Insecta: Hemiptera). PloS one 7: e45925.
    • (2012) PloS One , vol.7
    • Li, H.1    Liu, H.2    Song, F.3    Shi, A.4    Zhou, X.5
  • 27
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
    • Lowe TM, Eddy SR, (1997) tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25: 955-964.
    • (1997) Nucleic Acids Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 28
    • 0034610287 scopus 로고    scopus 로고
    • A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus
    • Lavrov DV, Brown WM, Boore JL, (2000) A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus. Proc Natl Acad Sci 97: 13738.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 13738
    • Lavrov, D.V.1    Brown, W.M.2    Boore, J.L.3
  • 29
    • 37549067395 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the tobacco hornworm, Manduca sexta, (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths
    • Cameron SL, Whiting MF, (2008) The complete mitochondrial genome of the tobacco hornworm, Manduca sexta, (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths. Gene 408: 112-123.
    • (2008) Gene , vol.408 , pp. 112-123
    • Cameron, S.L.1    Whiting, M.F.2
  • 30
    • 33750442556 scopus 로고    scopus 로고
    • Characteristics of the nuclear (18S, 5.8 S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements
    • Gillespie JJ, Johnston JS, Cannone JJ, Gutell RR, (2006) Characteristics of the nuclear (18S, 5.8 S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements. Insect Mol Biol 15: 657-686.
    • (2006) Insect Mol Biol , vol.15 , pp. 657-686
    • Gillespie, J.J.1    Johnston, J.S.2    Cannone, J.J.3    Gutell, R.R.4
  • 31
    • 2942571539 scopus 로고    scopus 로고
    • The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
    • Cannone J, Subramanian S, Schnare M, Collett J, D'Souza L, et al. (2002) The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC bioinformatics 3: 2.
    • (2002) BMC Bioinformatics , vol.3 , pp. 2
    • Cannone, J.1    Subramanian, S.2    Schnare, M.3    Collett, J.4    D'Souza, L.5
  • 32
    • 80052442439 scopus 로고    scopus 로고
    • The complete mitochondrial genome of Spilonota lechriaspis Meyrick (Lepidoptera: Tortricidae)
    • Zhao JL, Zhang YY, Luo AR, Jiang GF, Cameron SL, et al. (2011) The complete mitochondrial genome of Spilonota lechriaspis Meyrick (Lepidoptera: Tortricidae). Mol Biol Rep 38: 3757-3764.
    • (2011) Mol Biol Rep , vol.38 , pp. 3757-3764
    • Zhao, J.L.1    Zhang, Y.Y.2    Luo, A.R.3    Jiang, G.F.4    Cameron, S.L.5
  • 33
    • 0033070388 scopus 로고    scopus 로고
    • Papilio phylogeny based on mitochondrial Cytochrome Oxidase I and II genes
    • Caterino MS, Sperling FAH, (1999) Papilio phylogeny based on mitochondrial Cytochrome Oxidase I and II genes. Mol Phylogenet Evol 11: 122-137.
    • (1999) Mol Phylogenet Evol , vol.11 , pp. 122-137
    • Caterino, M.S.1    Sperling, F.A.H.2
  • 34
    • 82555173679 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the damsel bug Alloeorhynchus bakeri (Hemiptera: Nabidae)
    • Li H, Liu H, Cao L, Shi A, Yang H, et al. (2012) The complete mitochondrial genome of the damsel bug Alloeorhynchus bakeri (Hemiptera: Nabidae). Int J Biol Sci 8: 93.
    • (2012) Int J Biol Sci , vol.8 , pp. 93
    • Li, H.1    Liu, H.2    Cao, L.3    Shi, A.4    Yang, H.5
  • 35
    • 0028300297 scopus 로고
    • Sequences with the potential to form stem-and-loop structures are associated with coding-region duplications in animal mitochondrial DNA
    • Stanton DJ, Daehler LL, Moritz CC, Brown WM, (1994) Sequences with the potential to form stem-and-loop structures are associated with coding-region duplications in animal mitochondrial DNA. Genetics 137: 233-241.
    • (1994) Genetics , vol.137 , pp. 233-241
    • Stanton, D.J.1    Daehler, L.L.2    Moritz, C.C.3    Brown, W.M.4
  • 36
    • 0027219130 scopus 로고
    • Endotherms, ectotherms, and mitochondrial genome-size variation
    • Rand DM, (1993) Endotherms, ectotherms, and mitochondrial genome-size variation. J Mol Evol 37: 281-295.
    • (1993) J Mol Evol , vol.37 , pp. 281-295
    • Rand, D.M.1
  • 37
    • 0019444843 scopus 로고
    • tRNA punctuation model of RNA processing in human mitochondria
    • Ojala D, Montoya J, Attardi G, (1981) tRNA punctuation model of RNA processing in human mitochondria. Nature 290: 470-474.
    • (1981) Nature , vol.290 , pp. 470-474
    • Ojala, D.1    Montoya, J.2    Attardi, G.3
  • 38
    • 77953313931 scopus 로고    scopus 로고
    • Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects
    • Wei S, Shi M, Sharkey MJ, Van Achterberg C, Chen X, (2010) Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects. BMC genomics 11: 371.
    • (2010) BMC Genomics , vol.11 , pp. 371
    • Wei, S.1    Shi, M.2    Sharkey, M.J.3    Van Achterberg, C.4    Chen, X.5
  • 39
    • 33646363370 scopus 로고    scopus 로고
    • The Drosophila termination factor DmTTF regulates in vivo mitochondrial transcription
    • Roberti M, Bruni F, Polosa PL, Gadaleta MN, Cantatore P, (2006) The Drosophila termination factor DmTTF regulates in vivo mitochondrial transcription. Nucleic Acids Res 34: 2109-2116.
    • (2006) Nucleic Acids Res , vol.34 , pp. 2109-2116
    • Roberti, M.1    Bruni, F.2    Polosa, P.L.3    Gadaleta, M.N.4    Cantatore, P.5
  • 40
    • 78649873812 scopus 로고    scopus 로고
    • When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics
    • Song H, Sheffield NC, Cameron SL, Miller KB, Whiting MF, (2010) When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics. Syst Entomol 35: 429-448.
    • (2010) Syst Entomol , vol.35 , pp. 429-448
    • Song, H.1    Sheffield, N.C.2    Cameron, S.L.3    Miller, K.B.4    Whiting, M.F.5
  • 41
    • 70349434888 scopus 로고    scopus 로고
    • Nonstationary evolution and compositional heterogeneity in beetle mitochondrial phylogenomics
    • Sheffield NC, Song H, Cameron SL, Whiting MF, (2009) Nonstationary evolution and compositional heterogeneity in beetle mitochondrial phylogenomics. Syst Biol 58: 381-394.
    • (2009) Syst Biol , vol.58 , pp. 381-394
    • Sheffield, N.C.1    Song, H.2    Cameron, S.L.3    Whiting, M.F.4
  • 42
    • 0028790653 scopus 로고
    • Inferring phylogenies from DNA sequences of unequal base compositions
    • Galtier N, Gouy M, (1995) Inferring phylogenies from DNA sequences of unequal base compositions. Proc Natl Acad Sci U S A 92: 11317-11321.
    • (1995) Proc Natl Acad Sci U S A , vol.92 , pp. 11317-11321
    • Galtier, N.1    Gouy, M.2
  • 43
    • 77950588303 scopus 로고    scopus 로고
    • The larval head of Nevrorthidae and the phylogeny of Neuroptera (Insecta)
    • Beutel RG, Friedrich F, Aspöck U, (2010) The larval head of Nevrorthidae and the phylogeny of Neuroptera (Insecta). Zool J Linn Soc-Lond 158: 533-562.
    • (2010) Zool J Linn Soc-Lond , vol.158 , pp. 533-562
    • Beutel, R.G.1    Friedrich, F.2    Aspöck, U.3
  • 44
    • 5644298250 scopus 로고    scopus 로고
    • Molecular phylogeny of Neuropterida with emphasis on the lacewings (Neuroptera)
    • Winterton SL, (2003) Molecular phylogeny of Neuropterida with emphasis on the lacewings (Neuroptera). Entomol Abh 61: 158-160.
    • (2003) Entomol Abh , vol.61 , pp. 158-160
    • Winterton, S.L.1
  • 45
    • 78649629324 scopus 로고    scopus 로고
    • Head morphology of Osmylus fulvicephalus (Osmylidae, Neuroptera) and its phylogenetic implications
    • Beutel RG, Zimmermann D, Krauß M, Randolf S, Wipfler B, (2010) Head morphology of Osmylus fulvicephalus (Osmylidae, Neuroptera) and its phylogenetic implications. Org Divers Evol 10: 311-329.
    • (2010) Org Divers Evol , vol.10 , pp. 311-329
    • Beutel, R.G.1    Zimmermann, D.2    Krauß, M.3    Randolf, S.4    Wipfler, B.5
  • 46
    • 33845385936 scopus 로고    scopus 로고
    • Incorporating molecular evolution into phylogenetic analysis, and a new compilation of conserved polymerase chain reaction primers for animal mitochondrial DNA
    • Simon C, Buckley TR, Frati F, Stewart JB, Beckenbach AT, (2006) Incorporating molecular evolution into phylogenetic analysis, and a new compilation of conserved polymerase chain reaction primers for animal mitochondrial DNA. Annu Rev Ecol Evol Syst 37: 545-579.
    • (2006) Annu Rev Ecol Evol Syst , vol.37 , pp. 545-579
    • Simon, C.1    Buckley, T.R.2    Frati, F.3    Stewart, J.B.4    Beckenbach, A.T.5
  • 47
    • 0028251187 scopus 로고
    • Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers
    • Simon C, Frati F, Beckenbach A, Crespi B, Liu H, et al. (1994) Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Ent Soc Am 87: 651-701.
    • (1994) Ann Ent Soc Am , vol.87 , pp. 651-701
    • Simon, C.1    Frati, F.2    Beckenbach, A.3    Crespi, B.4    Liu, H.5
  • 49
    • 0027898410 scopus 로고
    • The mitochondrial genome of the mosquito Anopheles gambiae: DNA sequence, genome organization, and comparisons with mitochondrial sequences of other insects
    • Beard CB, Hamm D, Collins FH, (1993) The mitochondrial genome of the mosquito Anopheles gambiae: DNA sequence, genome organization, and comparisons with mitochondrial sequences of other insects. Insect Mol Biol 2: 103-124.
    • (1993) Insect Mol Biol , vol.2 , pp. 103-124
    • Beard, C.B.1    Hamm, D.2    Collins, F.H.3
  • 50
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 51
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 52
    • 3142727129 scopus 로고    scopus 로고
    • Spectral Repeat Finder (SRF): identification of repetitive sequences using Fourier transformation
    • Sharma D, Issac B, Raghava G, Ramaswamy R, (2004) Spectral Repeat Finder (SRF): identification of repetitive sequences using Fourier transformation. Bioinformatics 20: 1405-1412.
    • (2004) Bioinformatics , vol.20 , pp. 1405-1412
    • Sharma, D.1    Issac, B.2    Raghava, G.3    Ramaswamy, R.4
  • 53
    • 0029049426 scopus 로고
    • Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
    • Perna NT, Kocher TD, (1995) Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. J Mol Evol 41: 353-358.
    • (1995) J Mol Evol , vol.41 , pp. 353-358
    • Perna, N.T.1    Kocher, T.D.2
  • 54
    • 0034923337 scopus 로고    scopus 로고
    • Disparity index: a simple statistic to measure and test the homogeneity of substitution patterns between molecular sequences
    • Kumar S, Gadagkar SR, (2001) Disparity index: a simple statistic to measure and test the homogeneity of substitution patterns between molecular sequences. Genetics 158: 1321-1327.
    • (2001) Genetics , vol.158 , pp. 1321-1327
    • Kumar, S.1    Gadagkar, S.R.2
  • 55
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 56
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F, (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 57
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: selection of best-fit models of protein evolution
    • Abascal F, Zardoya R, Posada D, (2005) ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21: 2104-2105.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 58
    • 45849154165 scopus 로고    scopus 로고
    • jModelTest: phylogenetic model averaging
    • Posada D, (2008) jModelTest: phylogenetic model averaging. Mol Biol Evol 25: 1253-1256.
    • (2008) Mol Biol Evol , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 59
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution: 783-791.
    • (1985) Evolution , pp. 783-791
    • Felsenstein, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.