-
2
-
-
84890900097
-
-
WHO Antimicrobial Resistance; Fact sheet No. 194; World Health Organisation: 2002
-
WHO Antimicrobial Resistance; Fact sheet No. 194; World Health Organisation: 2002
-
-
-
-
3
-
-
0032014842
-
The challenge of antibiotic resistance
-
S. B. Levy The challenge of antibiotic resistance Sci. Am. 1998 278 46 53
-
(1998)
Sci. Am.
, vol.278
, pp. 46-53
-
-
Levy, S.B.1
-
4
-
-
84878875020
-
Lysine biosynthesis in bacteria: A metallodesuccinylase as a potential antimicrobial target
-
D. M. Gillner D. P. Becker R. C. Holz Lysine biosynthesis in bacteria: a metallodesuccinylase as a potential antimicrobial target JBIC, J. Biol. Inorg. Chem. 2013 18 155 163
-
(2013)
JBIC, J. Biol. Inorg. Chem.
, vol.18
, pp. 155-163
-
-
Gillner, D.M.1
Becker, D.P.2
Holz, R.C.3
-
5
-
-
71049142264
-
Inhibitors of bacterial N-succinyl-l,l-diaminopimelic acid desuccinylase (DapE) and demonstration of in vitro antimicrobial activity
-
D. Gillner N. Armoush R. C. Holz D. P. Becker Inhibitors of bacterial N-succinyl-l,l-diaminopimelic acid desuccinylase (DapE) and demonstration of in vitro antimicrobial activity Bioorg. Med. Chem. Lett. 2009 19 6350 6352
-
(2009)
Bioorg. Med. Chem. Lett.
, vol.19
, pp. 6350-6352
-
-
Gillner, D.1
Armoush, N.2
Holz, R.C.3
Becker, D.P.4
-
7
-
-
0013559826
-
N-Succinyl-l-Diaminopimelic Acid
-
C. Gilvarg N-Succinyl-l-Diaminopimelic Acid J. Biol. Chem. 1959 234 2955 2959
-
(1959)
J. Biol. Chem.
, vol.234
, pp. 2955-2959
-
-
Gilvarg, C.1
-
8
-
-
0032828165
-
Design of angiotensin converting enzyme inhibitors
-
D. W. Cushman M. A. Ondetti Design of angiotensin converting enzyme inhibitors Nat. Med. 1999 5 1110 1112
-
(1999)
Nat. Med.
, vol.5
, pp. 1110-1112
-
-
Cushman, D.W.1
Ondetti, M.A.2
-
9
-
-
79953838883
-
Selectivity of inhibition of N-succinyl-l,l-diaminopimelic acid desuccinylase (DapE) in bacteria: DapE is not the target of l-captopril antimicrobial activity
-
N. Uda M. Creus Selectivity of inhibition of N-succinyl-l,l- diaminopimelic acid desuccinylase (DapE) in bacteria: DapE is not the target of l-captopril antimicrobial activity Bioinorg. Chem. Appl. 2011 2011 306465
-
(2011)
Bioinorg. Chem. Appl.
, vol.2011
, pp. 306465
-
-
Uda, N.1
Creus, M.2
-
10
-
-
0041559790
-
DapE can function as an aspartyl peptidase in the presence of Mn 2+
-
D. H. Broder C. G. Miller DapE can function as an aspartyl peptidase in the presence of Mn2+ J. Bacteriol. 2003 185 4748 4754
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4748-4754
-
-
Broder, D.H.1
Miller, C.G.2
-
11
-
-
13744254341
-
The synthesis of diaminopimelic acid containing peptidoglycan fragments using metathesis cross coupling
-
A. R. Chowdhury G. J. Boons The synthesis of diaminopimelic acid containing peptidoglycan fragments using metathesis cross coupling Tetrahedron Lett. 2005 46 1675 1678
-
(2005)
Tetrahedron Lett.
, vol.46
, pp. 1675-1678
-
-
Chowdhury, A.R.1
Boons, G.J.2
-
12
-
-
0032555189
-
Hydrolysis of N-succinyl-l,l-diaminopimelic acid by the Haemophilus influenzae dapE-encoded desuccinylase: Metal activation, solvent isotope effects, and kinetic mechanism
-
T. L. Born R. J. Zheng J. S. Blanchard Hydrolysis of N-succinyl-l,l- diaminopimelic acid by the Haemophilus influenzae dapE-encoded desuccinylase: metal activation, solvent isotope effects, and kinetic mechanism Biochemistry 1998 37 10478 10487
-
(1998)
Biochemistry
, vol.37
, pp. 10478-10487
-
-
Born, T.L.1
Zheng, R.J.2
Blanchard, J.S.3
-
13
-
-
32144432437
-
The SWISS-MODEL workspace: A web-based environment for protein structure homology modeling
-
K. Arnold L. Bordoli J. Kopp T. Schwede The SWISS-MODEL workspace: a web-based environment for protein structure homology modeling Bioinformatics 2006 22 195 201
-
(2006)
Bioinformatics
, vol.22
, pp. 195-201
-
-
Arnold, K.1
Bordoli, L.2
Kopp, J.3
Schwede, T.4
-
14
-
-
74249090260
-
Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8
-
E. Krieger K. Joo J. Lee J. Lee S. Raman J. Thompson M. Tyka D. Baker K. Karplus Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: four approaches that performed well in CASP8 Proteins: Struct., Funct., Bioinf. 2009 77 114 122
-
(2009)
Proteins: Struct., Funct., Bioinf.
, vol.77
, pp. 114-122
-
-
Krieger, E.1
Joo, K.2
Lee, J.3
Lee, J.4
Raman, S.5
Thompson, J.6
Tyka, M.7
Baker, D.8
Karplus, K.9
-
15
-
-
84883251122
-
-
Schrödinger, LLC, New York, NY
-
Suite 2012: Maestro, version 9.3 edn., Schrödinger, LLC, New York, NY, 2012
-
(2012)
Suite 2012: Maestro, Version 9.3 Edn.
-
-
-
16
-
-
84875208117
-
-
Schrödinger, LLC, New York, NY
-
MacroModel, version 9.9 edn., Schrödinger, LLC, New York, NY, 2012
-
(2012)
MacroModel, Version 9.9 Edn.
-
-
-
17
-
-
79960029361
-
SwissDock, a protein-small molecule docking web service based on EADock DSS
-
A. Grosdidier V. Zoete O. Michielin SwissDock, a protein-small molecule docking web service based on EADock DSS Nucleic Acids Res. 2011 39 W270 W277
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Grosdidier, A.1
Zoete, V.2
Michielin, O.3
-
18
-
-
79958242366
-
Fast Docking Using the CHARMM Force Field with EADock DSS
-
A. Grosdidier V. Zoete O. Michielin Fast Docking Using the CHARMM Force Field with EADock DSS J. Comput. Chem. 2011 32 2149 2159
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 2149-2159
-
-
Grosdidier, A.1
Zoete, V.2
Michielin, O.3
-
20
-
-
84877310095
-
OpenStructure: An integrated software framework for computational structural biology
-
M. Biasini T. Schmidt S. Bienert V. Mariani G. Studer J. Haas N. Johner A. D. Schenk A. Philippsen T. Schwede OpenStructure: an integrated software framework for computational structural biology Acta Crystallogr., Sect. D: Biol. Crystallogr. 2013 69 701 709
-
(2013)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.69
, pp. 701-709
-
-
Biasini, M.1
Schmidt, T.2
Bienert, S.3
Mariani, V.4
Studer, G.5
Haas, J.6
Johner, N.7
Schenk, A.D.8
Philippsen, A.9
Schwede, T.10
-
21
-
-
0042820027
-
Substrate specificity, metal binding properties, and spectroscopic characterization of the DapE-encoded N-succinyl-l,l-diaminopimelic acid desuccinylase from Haemophilus influenzae
-
D. L. Bienvenue D. M. Gilner R. S. Davis B. Bennett R. C. Holz Substrate specificity, metal binding properties, and spectroscopic characterization of the DapE-encoded N-succinyl-l,l-diaminopimelic acid desuccinylase from Haemophilus influenzae Biochemistry 2003 42 10756 10763
-
(2003)
Biochemistry
, vol.42
, pp. 10756-10763
-
-
Bienvenue, D.L.1
Gilner, D.M.2
Davis, R.S.3
Bennett, B.4
Holz, R.C.5
-
22
-
-
77649340741
-
Structural Basis for Catalysis by the Mono- and Dimetalated Forms of the dapE-Encoded N-succinyl-l,l-Diaminopimelic Acid Desuccinylase
-
B. P. Nocek D. M. Gillner Y. Fan R. C. Holz A. Joachimiak Structural Basis for Catalysis by the Mono- and Dimetalated Forms of the dapE-Encoded N-succinyl-l,l-Diaminopimelic Acid Desuccinylase J. Mol. Biol. 2010 397 617 626
-
(2010)
J. Mol. Biol.
, vol.397
, pp. 617-626
-
-
Nocek, B.P.1
Gillner, D.M.2
Fan, Y.3
Holz, R.C.4
Joachimiak, A.5
-
23
-
-
0033581166
-
Manganese as a replacement for magnesium and zinc: Functional comparison of the divalent ions
-
C. W. Bock A. K. Katz G. D. Markham J. P. Glusker Manganese as a replacement for magnesium and zinc: Functional comparison of the divalent ions J. Am. Chem. Soc. 1999 121 7360 7372
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 7360-7372
-
-
Bock, C.W.1
Katz, A.K.2
Markham, G.D.3
Glusker, J.P.4
-
24
-
-
0017578611
-
Design of Specific Inhibitors of Angiotensin-Converting Enzyme - New Class of Orally Active Antihypertensive Agents
-
M. A. Ondetti D. W. Cushman Design of Specific Inhibitors of Angiotensin-Converting Enzyme-New Class of Orally Active Antihypertensive Agents Science 1977 196 441 444
-
(1977)
Science
, vol.196
, pp. 441-444
-
-
Ondetti, M.A.1
Cushman, D.W.2
-
25
-
-
0032555189
-
Hydrolysis of N-Succinyl-l,l-diaminopimelic Acid by the Haemophilus influenzae dapE-Encoded Desuccinylase: Metal Activation, Solvent Isotope Effects, and Kinetic Mechanism
-
T. L. Born R. Zheng J. S. Blanchard Hydrolysis of N-Succinyl-l,l- diaminopimelic Acid by the Haemophilus influenzae dapE-Encoded Desuccinylase: Metal Activation, Solvent Isotope Effects, and Kinetic Mechanism Biochemistry 1998 37 10478 10487
-
(1998)
Biochemistry
, vol.37
, pp. 10478-10487
-
-
Born, T.L.1
Zheng, R.2
Blanchard, J.S.3
-
26
-
-
0033543723
-
The Zn-peptidase superfamily: Functional convergence after evolutionary divergence
-
K. S. Makarova N. V. Grishin The Zn-peptidase superfamily: functional convergence after evolutionary divergence J. Mol. Biol. 1999 292 11 17
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 11-17
-
-
Makarova, K.S.1
Grishin, N.V.2
-
27
-
-
24644505760
-
Structural analysis of a set of proteins resulting from a bacterial genomics project
-
J. Badger J. M. Sauder J. M. Adams S. Antonysamy K. Bain M. G. Bergseid S. G. Buchanan M. D. Buchanan Y. Batiyenko J. A. Christopher S. Emtage A. Eroshkina I. Feil E. B. Furlong K. S. Gajiwala X. Gao D. He J. Hendle A. Huber K. Hoda P. Kearins C. Kissinger B. Laubert H. A. Lewis J. Lin K. Loomis D. Lorimer G. Louie M. Maletic C. D. Marsh I. Miller J. Molinari H. J. Muller-Dieckmann J. M. Newman B. W. Noland B. Pagarigan F. Park T. S. Peat K. W. Post S. Radojicic A. Ramos R. Romero M. E. Rutter W. E. Sanderson K. D. Schwinn J. Tresser J. Winhoven T. A. Wright L. Wu J. Xu T. J. Harris Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins 2005 60 787 796
-
(2005)
Proteins
, vol.60
, pp. 787-796
-
-
Badger, J.1
Sauder, J.M.2
Adams, J.M.3
Antonysamy, S.4
Bain, K.5
Bergseid, M.G.6
Buchanan, S.G.7
Buchanan, M.D.8
Batiyenko, Y.9
Christopher, J.A.10
Emtage, S.11
Eroshkina, A.12
Feil, I.13
Furlong, E.B.14
Gajiwala, K.S.15
Gao, X.16
He, D.17
Hendle, J.18
Huber, A.19
Hoda, K.20
Kearins, P.21
Kissinger, C.22
Laubert, B.23
Lewis, H.A.24
Lin, J.25
Loomis, K.26
Lorimer, D.27
Louie, G.28
Maletic, M.29
Marsh, C.D.30
Miller, I.31
Molinari, J.32
Muller-Dieckmann, H.J.33
Newman, J.M.34
Noland, B.W.35
Pagarigan, B.36
Park, F.37
Peat, T.S.38
Post, K.W.39
Radojicic, S.40
Ramos, A.41
Romero, R.42
Rutter, M.E.43
Sanderson, W.E.44
Schwinn, K.D.45
Tresser, J.46
Winhoven, J.47
Wright, T.A.48
Wu, L.49
Xu, J.50
Harris, T.J.51
more..
-
28
-
-
77956531070
-
Crystal Structure of Staphylococcus aureus Metallopeptidase (Sapep) Reveals Large Domain Motions between the Manganese-bound and Apo-states
-
T. S. Girish B. Gopal Crystal Structure of Staphylococcus aureus Metallopeptidase (Sapep) Reveals Large Domain Motions between the Manganese-bound and Apo-states J. Biol. Chem. 2010 285 29406 29415
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 29406-29415
-
-
Girish, T.S.1
Gopal, B.2
-
29
-
-
0029969577
-
Directed evolution of subtilisin e in Bacillus subtilis to enhance total activity in aqueous dimethylformamide
-
L. You F. H. Arnold Directed evolution of subtilisin E in Bacillus subtilis to enhance total activity in aqueous dimethylformamide Protein Eng. 1996 9 78
-
(1996)
Protein Eng.
, vol.9
, pp. 78
-
-
You, L.1
Arnold, F.H.2
-
31
-
-
77951993154
-
The challenges of determining metal-protein affinities
-
Z. G. Xiao A. G. Wedd The challenges of determining metal-protein affinities Nat. Prod. Rep. 2010 27 768 789
-
(2010)
Nat. Prod. Rep.
, vol.27
, pp. 768-789
-
-
Xiao, Z.G.1
Wedd, A.G.2
-
32
-
-
37349120036
-
Prediction of transition metal-binding sites from apo protein structures
-
M. Babor S. Gerzon B. Raveh V. Sobolev M. Edelman Prediction of transition metal-binding sites from apo protein structures Proteins: Struct., Funct., Bioinf. 2008 70 208 217
-
(2008)
Proteins: Struct., Funct., Bioinf.
, vol.70
, pp. 208-217
-
-
Babor, M.1
Gerzon, S.2
Raveh, B.3
Sobolev, V.4
Edelman, M.5
-
34
-
-
77952561593
-
Metalloproteomics, metalloproteomes, and the annotation of metalloproteins
-
W. Maret Metalloproteomics, metalloproteomes, and the annotation of metalloproteins Metallomics 2010 2 117 125
-
(2010)
Metallomics
, vol.2
, pp. 117-125
-
-
Maret, W.1
-
36
-
-
20644434591
-
Metal ions as cofactors for the binding of inhibitors to methionine aminopeptidase: A critical view of the relevance of in vitro metalloenzyme assays
-
R. Schiffmann A. Heine G. Klebe C. D. P. Klein Metal ions as cofactors for the binding of inhibitors to methionine aminopeptidase: a critical view of the relevance of in vitro metalloenzyme assays Angew. Chem., Int. Ed. 2005 44 3620 3623
-
(2005)
Angew. Chem., Int. Ed.
, vol.44
, pp. 3620-3623
-
-
Schiffmann, R.1
Heine, A.2
Klebe, G.3
Klein, C.D.P.4
-
37
-
-
0041735178
-
The 1.15 angstrom crystal structure of the Staphylococcus aureus methionyl-aminopeptidase and complexes with triazole based inhibitors
-
C. Oefner A. Douangamath A. D'Arcy S. Hafeli D. Mareque A. Mac Sweeney J. Padilla S. Pierau H. Schulz M. Thormann S. Wadman G. E. Dale The 1.15 angstrom crystal structure of the Staphylococcus aureus methionyl-aminopeptidase and complexes with triazole based inhibitors J. Mol. Biol. 2003 332 13 21
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 13-21
-
-
Oefner, C.1
Douangamath, A.2
D'Arcy, A.3
Hafeli, S.4
Mareque, D.5
Mac Sweeney, A.6
Padilla, J.7
Pierau, S.8
Schulz, H.9
Thormann, M.10
Wadman, S.11
Dale, G.E.12
-
38
-
-
0038792294
-
Discovery and structural modification of inhibitors of methionine aminopeptidases from Escherichia coli and Saccharomyces cerevisiae
-
Q. L. Luo J. Y. Li Z. Y. Liu L. L. Chen J. Li Z. Qian Q. Shen Y. Li G. H. Lushington Q. Z. Ye F. J. Nan Discovery and structural modification of inhibitors of methionine aminopeptidases from Escherichia coli and Saccharomyces cerevisiae J. Med. Chem. 2003 46 2631 2640
-
(2003)
J. Med. Chem.
, vol.46
, pp. 2631-2640
-
-
Luo, Q.L.1
Li, J.Y.2
Liu, Z.Y.3
Chen, L.L.4
Li, J.5
Qian, Z.6
Shen, Q.7
Li, Y.8
Lushington, G.H.9
Ye, Q.Z.10
Nan, F.J.11
-
39
-
-
55249112956
-
Fe(ii) is the native cofactor for Escherichia coli methionine aminopeptidase
-
S. C. Chai W. L. Wang Q. Z. Ye Fe(ii) is the native cofactor for Escherichia coli methionine aminopeptidase J. Biol. Chem. 2008 283 26879 26885
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 26879-26885
-
-
Chai, S.C.1
Wang, W.L.2
Ye, Q.Z.3
-
40
-
-
79958249114
-
Growth inhibition of Escherichia coli and methicillin-resistant Staphylococcus aureus by targeting cellular methionine aminopeptidase
-
S. C. Chai W. L. Wang D. R. Ding Q. Z. Ye Growth inhibition of Escherichia coli and methicillin-resistant Staphylococcus aureus by targeting cellular methionine aminopeptidase Eur. J. Med. Chem. 2011 46 3537 3540
-
(2011)
Eur. J. Med. Chem.
, vol.46
, pp. 3537-3540
-
-
Chai, S.C.1
Wang, W.L.2
Ding, D.R.3
Ye, Q.Z.4
-
41
-
-
84861569777
-
Hydroxamic Acids as Potent Inhibitors of FeII and MnII E coli Methionine Aminopeptidase: Biological Activities and X-ray Structures of Oxazole Hydroxamate-EcMetAP-Mn Complexes
-
F. Huguet A. Melet R. A. de Sousa A. Lieutaud J. Chevalier L. Maigre P. Deschamps A. Tomas N. Leulliot J. M. Pages I. Artaud Hydroxamic Acids as Potent Inhibitors of FeII and MnII E. coli Methionine Aminopeptidase: Biological Activities and X-ray Structures of Oxazole Hydroxamate-EcMetAP-Mn Complexes ChemMedChem 2012 7 1020 1030
-
(2012)
ChemMedChem
, vol.7
, pp. 1020-1030
-
-
Huguet, F.1
Melet, A.2
De Sousa, R.A.3
Lieutaud, A.4
Chevalier, J.5
Maigre, L.6
Deschamps, P.7
Tomas, A.8
Leulliot, N.9
Pages, J.M.10
Artaud, I.11
-
42
-
-
33748430340
-
Peptide deformylase as an antibacterial target: A critical assessment
-
J. A. Leeds C. R. Dean Peptide deformylase as an antibacterial target: a critical assessment Curr. Opin. Pharmacol. 2006 6 445 452
-
(2006)
Curr. Opin. Pharmacol.
, vol.6
, pp. 445-452
-
-
Leeds, J.A.1
Dean, C.R.2
-
43
-
-
0033936704
-
Peptide deformylase as a target for new generation, broad spectrum antimicrobial agents
-
C. Giglione M. Pierre T. Meinnel Peptide deformylase as a target for new generation, broad spectrum antimicrobial agents Mol. Microbiol. 2000 36 1197 1205
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 1197-1205
-
-
Giglione, C.1
Pierre, M.2
Meinnel, T.3
-
44
-
-
84879359476
-
Metalloenzyme inhibitors for the treatment of Gram-negative bacterial infections: A patent review (2009-2012)
-
C. T. Supuran F. Carta A. Scozzafava Metalloenzyme inhibitors for the treatment of Gram-negative bacterial infections: a patent review (2009-2012) Expert Opin. Ther. Pat. 2013 1 12
-
(2013)
Expert Opin. Ther. Pat.
, pp. 1-12
-
-
Supuran, C.T.1
Carta, F.2
Scozzafava, A.3
-
45
-
-
0028790271
-
Mapping of the active-site zinc ligands of peptide deformylase
-
T. Meinnel C. Lazennec S. Blanquet Mapping of the Active-Site Zinc Ligands of Peptide Deformylase J. Mol. Biol. 1995 254 175 183
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 175-183
-
-
Meinnel, T.1
Lazennec, C.2
Blanquet, S.3
-
46
-
-
0032575507
-
Oxygen-mediated inactivation of peptide deformylase
-
P. T. R. Rajagopalan D. Pei Oxygen-mediated inactivation of peptide deformylase J. Biol. Chem. 1998 273 22305 22310
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 22305-22310
-
-
Rajagopalan, P.T.R.1
Pei, D.2
-
48
-
-
79951502545
-
Metal use in ribonucleotide reductase R2, di-iron, di-manganese and heterodinuclear-an intricate bioinorganic workaround to use different metals for the same reaction
-
M. Hogbom Metal use in ribonucleotide reductase R2, di-iron, di-manganese and heterodinuclear-an intricate bioinorganic workaround to use different metals for the same reaction Metallomics 2011 3 110 120
-
(2011)
Metallomics
, vol.3
, pp. 110-120
-
-
Hogbom, M.1
-
49
-
-
40449131050
-
Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms
-
Y. Xu L. Feng P. D. Jeffrey Y. G. Shi F. M. M. Morel Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms Nature 2008 452 56 62
-
(2008)
Nature
, vol.452
, pp. 56-62
-
-
Xu, Y.1
Feng, L.2
Jeffrey, P.D.3
Shi, Y.G.4
Morel, F.M.M.5
-
50
-
-
77956925998
-
Messy biology and the origins of evolutionary innovations
-
D. S. Tawfik Messy biology and the origins of evolutionary innovations Nat. Chem. Biol. 2010 6 692 696
-
(2010)
Nat. Chem. Biol.
, vol.6
, pp. 692-696
-
-
Tawfik, D.S.1
|