-
1
-
-
39849100395
-
Regulation of the fimB promoter: a case of differential regulation by ppGpp and DksA in vivo
-
Åberg, A., Shingler, V., and Balsalobre, C. (2008) Regulation of the fimB promoter: a case of differential regulation by ppGpp and DksA in vivo. Mol Microbiol 67: 1223-1241.
-
(2008)
Mol Microbiol
, vol.67
, pp. 1223-1241
-
-
Åberg, A.1
Shingler, V.2
Balsalobre, C.3
-
2
-
-
65549155326
-
Similar and divergent effects of ppGpp and DksA deficiencies on transcription in Escherichia coli
-
Åberg, A., Fernández-Vázquez, J., Cabrer-Panes, J.D., Sánchez, A., and Balsalobre, C. (2009) Similar and divergent effects of ppGpp and DksA deficiencies on transcription in Escherichia coli. J Bacteriol 191: 3226-3236.
-
(2009)
J Bacteriol
, vol.191
, pp. 3226-3236
-
-
Åberg, A.1
Fernández-Vázquez, J.2
Cabrer-Panes, J.D.3
Sánchez, A.4
Balsalobre, C.5
-
3
-
-
84877933468
-
The Bartonella quintana extracytoplasmic function sigma factor RpoE has a role in bacterial adaptation to the arthropod vector environment
-
Abromaitis, S., and Koehler, J.E. (2013) The Bartonella quintana extracytoplasmic function sigma factor RpoE has a role in bacterial adaptation to the arthropod vector environment. J Bacteriol 195: 2662-2674.
-
(2013)
J Bacteriol
, vol.195
, pp. 2662-2674
-
-
Abromaitis, S.1
Koehler, J.E.2
-
4
-
-
3042831731
-
The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae
-
Alsmark, C.M., Frank, A.C., Karlberg, E.O., Legault, B.A., Ardell, D.H., Canbäck, B., etal. (2004) The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae. Proc Natl Acad Sci USA 101: 9716-9721.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 9716-9721
-
-
Alsmark, C.M.1
Frank, A.C.2
Karlberg, E.O.3
Legault, B.A.4
Ardell, D.H.5
Canbäck, B.6
-
5
-
-
0037890192
-
The heat shock response of Escherichia coli
-
Arsène, F., Tomoyasu, T., and Bukau, B. (2000) The heat shock response of Escherichia coli. Int J Food Microbiol 55: 3-9.
-
(2000)
Int J Food Microbiol
, vol.55
, pp. 3-9
-
-
Arsène, F.1
Tomoyasu, T.2
Bukau, B.3
-
6
-
-
2042475439
-
Structural basis for transcription regulation by alarmone ppGpp
-
Artsimovitch, I., Patlan, V., Sekine, S., Vassylyeva, M.N., Hosaka, T., Ochi, K., etal. (2004) Structural basis for transcription regulation by alarmone ppGpp. Cell 117: 299-310.
-
(2004)
Cell
, vol.117
, pp. 299-310
-
-
Artsimovitch, I.1
Patlan, V.2
Sekine, S.3
Vassylyeva, M.N.4
Hosaka, T.5
Ochi, K.6
-
7
-
-
79961217635
-
The RelA/SpoT homolog (RSH) superfamily: distribution and functional evolution of ppGpp synthetases and hydrolases across the tree of life
-
Atkinson, G.C., Tenson, T., and Hauryliuk, V. (2011) The RelA/SpoT homolog (RSH) superfamily: distribution and functional evolution of ppGpp synthetases and hydrolases across the tree of life. PLoS ONE 6: e23479.
-
(2011)
PLoS ONE
, vol.6
-
-
Atkinson, G.C.1
Tenson, T.2
Hauryliuk, V.3
-
8
-
-
84866372439
-
Dual RpoH sigma factors and transcriptional plasticity in a symbiotic bacterium
-
Barnett, M.J., Bittner, A.N., Toman, C.J., Oke, V., and Long, S.R. (2012) Dual RpoH sigma factors and transcriptional plasticity in a symbiotic bacterium. J Bacteriol 194: 4983-4994.
-
(2012)
J Bacteriol
, vol.194
, pp. 4983-4994
-
-
Barnett, M.J.1
Bittner, A.N.2
Toman, C.J.3
Oke, V.4
Long, S.R.5
-
9
-
-
33750479525
-
Acyl carrier protein/SpoT interaction, the switch linking SpoT-dependent stress response to fatty acid metabolism
-
Battesti, A., and Bouveret, E. (2006) Acyl carrier protein/SpoT interaction, the switch linking SpoT-dependent stress response to fatty acid metabolism. Mol Microbiol 62: 1048-1063.
-
(2006)
Mol Microbiol
, vol.62
, pp. 1048-1063
-
-
Battesti, A.1
Bouveret, E.2
-
10
-
-
33646918282
-
Environmental signals generate a differential and coordinated expression of the heme receptor gene family of Bartonella quintana
-
Battisti, J.M., Sappington, K.N., Smitherman, L.S., Parrow, N.L., and Minnick, M.F. (2006) Environmental signals generate a differential and coordinated expression of the heme receptor gene family of Bartonella quintana. Infect Immun 74: 3251-3261.
-
(2006)
Infect Immun
, vol.74
, pp. 3251-3261
-
-
Battisti, J.M.1
Sappington, K.N.2
Smitherman, L.S.3
Parrow, N.L.4
Minnick, M.F.5
-
11
-
-
34548491865
-
Transcriptional regulation of the heme binding protein gene family of Bartonella quintana is accomplished by a novel promoter element and iron response regulator
-
Battisti, J.M., Smitherman, L.S., Sappington, K.N., Parrow, N.L., Raghavan, R., and Minnick, M.F. (2007) Transcriptional regulation of the heme binding protein gene family of Bartonella quintana is accomplished by a novel promoter element and iron response regulator. Infect Immun 75: 4373-4385.
-
(2007)
Infect Immun
, vol.75
, pp. 4373-4385
-
-
Battisti, J.M.1
Smitherman, L.S.2
Sappington, K.N.3
Parrow, N.L.4
Raghavan, R.5
Minnick, M.F.6
-
12
-
-
33645881935
-
Regulation of bacterial virulence by two-component systems
-
Beier, D., and Gross, R. (2006) Regulation of bacterial virulence by two-component systems. Curr Opin Microbiol 9: 143-152.
-
(2006)
Curr Opin Microbiol
, vol.9
, pp. 143-152
-
-
Beier, D.1
Gross, R.2
-
13
-
-
68249086310
-
Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii
-
Berglund, E.C., Frank, A.C., Calteau, A., Vinnere Pettersson, O., Granberg, F., Eriksson, A.S., etal. (2009) Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii. PLoS Genet 5: e1000546.
-
(2009)
PLoS Genet
, vol.5
-
-
Berglund, E.C.1
Frank, A.C.2
Calteau, A.3
Vinnere Pettersson, O.4
Granberg, F.5
Eriksson, A.S.6
-
14
-
-
0035909996
-
Alkalinization by chloride/bicarbonate pathway in larval mosquito midgut
-
Boudko, D.Y., Moroz, L.L., Harvey, W.R., and Linser, P.J. (2001) Alkalinization by chloride/bicarbonate pathway in larval mosquito midgut. Proc Natl Acad Sci USA 98: 15354-15359.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 15354-15359
-
-
Boudko, D.Y.1
Moroz, L.L.2
Harvey, W.R.3
Linser, P.J.4
-
15
-
-
79955026314
-
The complex logic of stringent response regulation in Caulobacter crescentus: starvation signalling in an oligotrophic environment
-
Boutte, C.C., and Crosson, S. (2011) The complex logic of stringent response regulation in Caulobacter crescentus: starvation signalling in an oligotrophic environment. Mol Microbiol 80: 695-714.
-
(2011)
Mol Microbiol
, vol.80
, pp. 695-714
-
-
Boutte, C.C.1
Crosson, S.2
-
16
-
-
84875852284
-
Bacterial lifestyle shapes stringent response activation
-
Boutte, C.C., and Crosson, S. (2013) Bacterial lifestyle shapes stringent response activation. Trends Microbiol 21: 174-180.
-
(2013)
Trends Microbiol
, vol.21
, pp. 174-180
-
-
Boutte, C.C.1
Crosson, S.2
-
17
-
-
30344476728
-
New horizons for (p)ppGpp in bacterial and plant physiology
-
Braeken, K., Moris, M., Daniels, R., Vanderleyden, J., and Michiels, J. (2006) New horizons for (p)ppGpp in bacterial and plant physiology. Trends Microbiol 14: 45-54.
-
(2006)
Trends Microbiol
, vol.14
, pp. 45-54
-
-
Braeken, K.1
Moris, M.2
Daniels, R.3
Vanderleyden, J.4
Michiels, J.5
-
18
-
-
49649116071
-
Revisiting the host as a growth medium
-
Brown, S.A., Palmer, K.L., and Whiteley, M. (2008) Revisiting the host as a growth medium. Nat Rev Microbiol 6: 657-666.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 657-666
-
-
Brown, S.A.1
Palmer, K.L.2
Whiteley, M.3
-
19
-
-
67949107950
-
Ecological fitness and strategies of adaptation of Bartonella species to their hosts and vectors
-
Chomel, B.B., Boulouis, H.J., Breitschwerdt, E.B., Kasten, R.W., Vayssier-Taussat, M., Birtles, R.J., etal. (2009) Ecological fitness and strategies of adaptation of Bartonella species to their hosts and vectors. Vet Res 40: 29.
-
(2009)
Vet Res
, vol.40
, pp. 29
-
-
Chomel, B.B.1
Boulouis, H.J.2
Breitschwerdt, E.B.3
Kasten, R.W.4
Vayssier-Taussat, M.5
Birtles, R.J.6
-
20
-
-
0033768412
-
Bacterial virulence gene regulation: an evolutionary perspective
-
Cotter, P.A., and DiRita, V.J. (2000) Bacterial virulence gene regulation: an evolutionary perspective. Annu Rev Microbiol 54: 519-565.
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 519-565
-
-
Cotter, P.A.1
DiRita, V.J.2
-
21
-
-
77952902996
-
ppGpp conjures bacterial virulence
-
Dalebroux, Z.D., Svensson, S.L., Gaynor, E.C., and Swanson, M.S. (2010) ppGpp conjures bacterial virulence. Microbiol Mol Biol Rev 74: 171-199.
-
(2010)
Microbiol Mol Biol Rev
, vol.74
, pp. 171-199
-
-
Dalebroux, Z.D.1
Svensson, S.L.2
Gaynor, E.C.3
Swanson, M.S.4
-
22
-
-
8644255315
-
Molecular and cellular basis of Bartonella pathogenesis
-
Dehio, C. (2004) Molecular and cellular basis of Bartonella pathogenesis. Annu Rev Microbiol 58: 365-390.
-
(2004)
Annu Rev Microbiol
, vol.58
, pp. 365-390
-
-
Dehio, C.1
-
23
-
-
22944484739
-
Bartonella-host-cell interactions and vascular tumour formation
-
Dehio, C. (2005) Bartonella-host-cell interactions and vascular tumour formation. Nat Rev Microbiol 3: 621-631.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 621-631
-
-
Dehio, C.1
-
24
-
-
0031015479
-
Maintenance of broad-host-range incompatibility group P and group Q plasmids and transposition of Tn5 in Bartonella henselae following conjugal plasmid transfer from Escherichia coli
-
Dehio, C., and Meyer, M. (1997) Maintenance of broad-host-range incompatibility group P and group Q plasmids and transposition of Tn5 in Bartonella henselae following conjugal plasmid transfer from Escherichia coli. J Bacteriol 179: 538-540.
-
(1997)
J Bacteriol
, vol.179
, pp. 538-540
-
-
Dehio, C.1
Meyer, M.2
-
25
-
-
0032581533
-
Construction of versatile high-level expression vectors for Bartonella henselae and the use of green fluorescent protein as a new expression marker
-
Dehio, M., Knorre, A., Lanz, C., and Dehio, C. (1998) Construction of versatile high-level expression vectors for Bartonella henselae and the use of green fluorescent protein as a new expression marker. Gene 215: 223-229.
-
(1998)
Gene
, vol.215
, pp. 223-229
-
-
Dehio, M.1
Knorre, A.2
Lanz, C.3
Dehio, C.4
-
26
-
-
33750480906
-
An RpoH-like heat shock sigma factor is involved in stress response and virulence in Brucella melitensis 16M
-
Delory, M., Hallez, R., Letesson, J.J., and De Bolle, X. (2006) An RpoH-like heat shock sigma factor is involved in stress response and virulence in Brucella melitensis 16M. J Bacteriol 188: 7707-7710.
-
(2006)
J Bacteriol
, vol.188
, pp. 7707-7710
-
-
Delory, M.1
Hallez, R.2
Letesson, J.J.3
De Bolle, X.4
-
27
-
-
77349109268
-
Role of RpoS in virulence of pathogens
-
Dong, T., and Schellhorn, H.E. (2010) Role of RpoS in virulence of pathogens. Infect Immun 78: 887-897.
-
(2010)
Infect Immun
, vol.78
, pp. 887-897
-
-
Dong, T.1
Schellhorn, H.E.2
-
28
-
-
84866951830
-
Convergence of the transcriptional responses to heat shock and singlet oxygen stresses
-
Dufour, Y.S., Imam, S., Koo, B.M., Green, H.A., and Donohue, T.J. (2012) Convergence of the transcriptional responses to heat shock and singlet oxygen stresses. PLoS Genet 8: e1002929.
-
(2012)
PLoS Genet
, vol.8
-
-
Dufour, Y.S.1
Imam, S.2
Koo, B.M.3
Green, H.A.4
Donohue, T.J.5
-
29
-
-
84864000934
-
Bartonella entry mechanisms into mammalian host cells
-
Eicher, S.C., and Dehio, C. (2012) Bartonella entry mechanisms into mammalian host cells. Cell Microbiol 14: 1166-1173.
-
(2012)
Cell Microbiol
, vol.14
, pp. 1166-1173
-
-
Eicher, S.C.1
Dehio, C.2
-
30
-
-
77952884163
-
Carbon metabolism of intracellular bacterial pathogens and possible links to virulence
-
Eisenreich, W., Dandekar, T., Heesemann, J., and Goebel, W. (2010) Carbon metabolism of intracellular bacterial pathogens and possible links to virulence. Nat Rev Microbiol 8: 401-412.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 401-412
-
-
Eisenreich, W.1
Dandekar, T.2
Heesemann, J.3
Goebel, W.4
-
31
-
-
84860380221
-
Transcription initiation factor DksA has diverse effects on RNA chain elongation
-
Furman, R., Sevostyanova, A., and Artsimovitch, I. (2012) Transcription initiation factor DksA has diverse effects on RNA chain elongation. Nucleic Acids Res 40: 3392-3402.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 3392-3402
-
-
Furman, R.1
Sevostyanova, A.2
Artsimovitch, I.3
-
32
-
-
84868327851
-
Large-scale quantitative assessment of different in-solution protein digestion protocols reveals superior cleavage efficiency of tandem Lys-C/trypsin proteolysis over trypsin digestion
-
Glatter, T., Ludwig, C., Ahrné, E., Aebersold, R., Heck, A.J., and Schmidt, A. (2012) Large-scale quantitative assessment of different in-solution protein digestion protocols reveals superior cleavage efficiency of tandem Lys-C/trypsin proteolysis over trypsin digestion. J Proteome Res 11: 5145-5156.
-
(2012)
J Proteome Res
, vol.11
, pp. 5145-5156
-
-
Glatter, T.1
Ludwig, C.2
Ahrné, E.3
Aebersold, R.4
Heck, A.J.5
Schmidt, A.6
-
33
-
-
33748648583
-
Activity of Rhodobacter sphaeroides RpoHII, a second member of the heat shock sigma factor family
-
Green, H.A., and Donohue, T.J. (2006) Activity of Rhodobacter sphaeroides RpoHII, a second member of the heat shock sigma factor family. J Bacteriol 188: 5712-5721.
-
(2006)
J Bacteriol
, vol.188
, pp. 5712-5721
-
-
Green, H.A.1
Donohue, T.J.2
-
34
-
-
0027229320
-
Signal transduction and virulence regulation in human and animal pathogens
-
Gross, R. (1993) Signal transduction and virulence regulation in human and animal pathogens. FEMS Microbiol Rev 10: 301-326.
-
(1993)
FEMS Microbiol Rev
, vol.10
, pp. 301-326
-
-
Gross, R.1
-
35
-
-
0021225289
-
The htpR gene product of E. coli is a sigma factor for heat-shock promoters
-
Grossman, A.D., Erickson, J.W., and Gross, C.A. (1984) The htpR gene product of E. coli is a sigma factor for heat-shock promoters. Cell 38: 383-390.
-
(1984)
Cell
, vol.38
, pp. 383-390
-
-
Grossman, A.D.1
Erickson, J.W.2
Gross, C.A.3
-
36
-
-
84875987691
-
A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen Bartonella
-
Guy, L., Nystedt, B., Toft, C., Zaremba-Niedzwiedzka, K., Berglund, E.C., Granberg, F., etal. (2013) A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen Bartonella. PLoS Genet 9: e1003393.
-
(2013)
PLoS Genet
, vol.9
-
-
Guy, L.1
Nystedt, B.2
Toft, C.3
Zaremba-Niedzwiedzka, K.4
Berglund, E.C.5
Granberg, F.6
-
37
-
-
84855645437
-
Intruders below the radar: molecular pathogenesis of Bartonella spp.
-
Harms, A., and Dehio, C. (2012) Intruders below the radar: molecular pathogenesis of Bartonella spp. Clin Microbiol Rev 25: 42-78.
-
(2012)
Clin Microbiol Rev
, vol.25
, pp. 42-78
-
-
Harms, A.1
Dehio, C.2
-
38
-
-
84861792068
-
Extra cytoplasmic function sigma factor activation
-
Ho, T.D., and Ellermeier, C.D. (2012) Extra cytoplasmic function sigma factor activation. Curr Opin Microbiol 15: 182-188.
-
(2012)
Curr Opin Microbiol
, vol.15
, pp. 182-188
-
-
Ho, T.D.1
Ellermeier, C.D.2
-
39
-
-
1842766260
-
Conformational antagonism between opposing active sites in a bifunctional RelA/SpoT homolog modulates (p)ppGpp metabolism during the stringent response [corrected]
-
Hogg, T., Mechold, U., Malke, H., Cashel, M., and Hilgenfeld, R. (2004) Conformational antagonism between opposing active sites in a bifunctional RelA/SpoT homolog modulates (p)ppGpp metabolism during the stringent response [corrected]. Cell 117: 57-68.
-
(2004)
Cell
, vol.117
, pp. 57-68
-
-
Hogg, T.1
Mechold, U.2
Malke, H.3
Cashel, M.4
Hilgenfeld, R.5
-
40
-
-
0031983780
-
Metabolic roles of a Rhodobacter sphaeroides member of the sigma32 family
-
Karls, R.K., Brooks, J., Rossmeissl, P., Luedke, J., and Donohue, T.J. (1998) Metabolic roles of a Rhodobacter sphaeroides member of the sigma32 family. J Bacteriol 180: 10-19.
-
(1998)
J Bacteriol
, vol.180
, pp. 10-19
-
-
Karls, R.K.1
Brooks, J.2
Rossmeissl, P.3
Luedke, J.4
Donohue, T.J.5
-
41
-
-
29144437058
-
Alternative sigma factors and their roles in bacterial virulence
-
Kazmierczak, M.J., Wiedmann, M., and Boor, K.J. (2005) Alternative sigma factors and their roles in bacterial virulence. Microbiol Mol Biol Rev 69: 527-543.
-
(2005)
Microbiol Mol Biol Rev
, vol.69
, pp. 527-543
-
-
Kazmierczak, M.J.1
Wiedmann, M.2
Boor, K.J.3
-
42
-
-
80051952474
-
ppGpp in Sinorhizobium meliloti: biosynthesis in response to sudden nutritional downshifts and modulation of the transcriptome
-
Krol, E., and Becker, A. (2011) ppGpp in Sinorhizobium meliloti: biosynthesis in response to sudden nutritional downshifts and modulation of the transcriptome. Mol Microbiol 81: 1233-1254.
-
(2011)
Mol Microbiol
, vol.81
, pp. 1233-1254
-
-
Krol, E.1
Becker, A.2
-
43
-
-
79955047348
-
Direct regulation of Escherichia coli ribosomal protein promoters by the transcription factors ppGpp and DksA
-
Lemke, J.J., Sanchez-Vazquez, P., Burgos, H.L., Hedberg, G., Ross, W., and Gourse, R.L. (2011) Direct regulation of Escherichia coli ribosomal protein promoters by the transcription factors ppGpp and DksA. Proc Natl Acad Sci USA 108: 5712-5717.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 5712-5717
-
-
Lemke, J.J.1
Sanchez-Vazquez, P.2
Burgos, H.L.3
Hedberg, G.4
Ross, W.5
Gourse, R.L.6
-
44
-
-
35649022199
-
Characterization of an immunogenic outer membrane autotransporter protein, Arp, of Bartonella henselae
-
Litwin, C.M., Rawlins, M.L., and Swenson, E.M. (2007) Characterization of an immunogenic outer membrane autotransporter protein, Arp, of Bartonella henselae. Infect Immun 75: 5255-5263.
-
(2007)
Infect Immun
, vol.75
, pp. 5255-5263
-
-
Litwin, C.M.1
Rawlins, M.L.2
Swenson, E.M.3
-
45
-
-
84876304918
-
Bartonella henselae trimeric autotransporter adhesin BadA expression interferes with effector translocation by the VirB/D4 type IV secretion system
-
Lu, Y.Y., Franz, B., Truttmann, M.C., Riess, T., Gay-Fraret, J., Faustmann, M., etal. (2013) Bartonella henselae trimeric autotransporter adhesin BadA expression interferes with effector translocation by the VirB/D4 type IV secretion system. Cell Microbiol 15: 759-778.
-
(2013)
Cell Microbiol
, vol.15
, pp. 759-778
-
-
Lu, Y.Y.1
Franz, B.2
Truttmann, M.C.3
Riess, T.4
Gay-Fraret, J.5
Faustmann, M.6
-
46
-
-
83855165675
-
The myriad roles of cyclic AMP in microbial pathogens: from signal to sword
-
McDonough, K.A., and Rodriguez, A. (2012) The myriad roles of cyclic AMP in microbial pathogens: from signal to sword. Nat Rev Microbiol 10: 27-38.
-
(2012)
Nat Rev Microbiol
, vol.10
, pp. 27-38
-
-
McDonough, K.A.1
Rodriguez, A.2
-
47
-
-
34447540221
-
Identical, independent, and opposing roles of ppGpp and DksA in Escherichia coli
-
Magnusson, L.U., Gummesson, B., Joksimović, P., Farewell, A., and Nyström, T. (2007) Identical, independent, and opposing roles of ppGpp and DksA in Escherichia coli. J Bacteriol 189: 5193-5202.
-
(2007)
J Bacteriol
, vol.189
, pp. 5193-5202
-
-
Magnusson, L.U.1
Gummesson, B.2
Joksimović, P.3
Farewell, A.4
Nyström, T.5
-
48
-
-
62249222127
-
The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses
-
Martínez-Salazar, J.M., Sandoval-Calderón, M., Guo, X., Castillo-Ramírez, S., Reyes, A., Loza, M.G., etal. (2009) The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses. Microbiology 155: 386-397.
-
(2009)
Microbiology
, vol.155
, pp. 386-397
-
-
Martínez-Salazar, J.M.1
Sandoval-Calderón, M.2
Guo, X.3
Castillo-Ramírez, S.4
Reyes, A.5
Loza, M.G.6
-
49
-
-
0034866076
-
Comparative genomics and evolution of genes encoding bacterial (p)ppGpp synthetases/hydrolases (the Rel, RelA and SpoT proteins)
-
Mittenhuber, G. (2001) Comparative genomics and evolution of genes encoding bacterial (p)ppGpp synthetases/hydrolases (the Rel, RelA and SpoT proteins). J Mol Microbiol Biotechnol 3: 585-600.
-
(2001)
J Mol Microbiol Biotechnol
, vol.3
, pp. 585-600
-
-
Mittenhuber, G.1
-
50
-
-
0026019764
-
A series of wide-host-range low-copy-number vectors that allow direct screening for recombinants
-
Morales, V.M., Bäckman, A., and Bagdasarian, M. (1991) A series of wide-host-range low-copy-number vectors that allow direct screening for recombinants. Gene 97: 39-47.
-
(1991)
Gene
, vol.97
, pp. 39-47
-
-
Morales, V.M.1
Bäckman, A.2
Bagdasarian, M.3
-
51
-
-
79959469316
-
Trimeric autotransporter adhesin-dependent adherence of Bartonella henselae, Bartonella quintana, and Yersinia enterocolitica to matrix components and endothelial cells under static and dynamic flow conditions
-
Müller, N.F., Kaiser, P.O., Linke, D., Schwarz, H., Riess, T., Schäfer, A., etal. (2011) Trimeric autotransporter adhesin-dependent adherence of Bartonella henselae, Bartonella quintana, and Yersinia enterocolitica to matrix components and endothelial cells under static and dynamic flow conditions. Infect Immun 79: 2544-2553.
-
(2011)
Infect Immun
, vol.79
, pp. 2544-2553
-
-
Müller, N.F.1
Kaiser, P.O.2
Linke, D.3
Schwarz, H.4
Riess, T.5
Schäfer, A.6
-
52
-
-
58149503635
-
RpoH(II) activates oxidative-stress defense systems and is controlled by RpoE in the singlet oxygen-dependent response in Rhodobacter sphaeroides
-
Nuss, A.M., Glaeser, J., and Klug, G. (2009) RpoH(II) activates oxidative-stress defense systems and is controlled by RpoE in the singlet oxygen-dependent response in Rhodobacter sphaeroides. J Bacteriol 191: 220-230.
-
(2009)
J Bacteriol
, vol.191
, pp. 220-230
-
-
Nuss, A.M.1
Glaeser, J.2
Klug, G.3
-
53
-
-
0031970701
-
Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: a genetic analysis
-
O'Toole, G.A., and Kolter, R. (1998) Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: a genetic analysis. Mol Microbiol 28: 449-461.
-
(1998)
Mol Microbiol
, vol.28
, pp. 449-461
-
-
O'Toole, G.A.1
Kolter, R.2
-
54
-
-
0034807840
-
Identification of the heat-shock sigma factor RpoH and a second RpoH-like protein in Sinorhizobium meliloti
-
Oke, V., Rushing, B.G., Fisher, E.J., Moghadam-Tabrizi, M., and Long, S.R. (2001) Identification of the heat-shock sigma factor RpoH and a second RpoH-like protein in Sinorhizobium meliloti. Microbiology 147: 2399-2408.
-
(2001)
Microbiology
, vol.147
, pp. 2399-2408
-
-
Oke, V.1
Rushing, B.G.2
Fisher, E.J.3
Moghadam-Tabrizi, M.4
Long, S.R.5
-
55
-
-
84887407404
-
Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome
-
Epub ahead of print
-
Omasits, U., Quebatte, M., Stekhoven, D.J., Fortes, C., Roschitzki, B., Robinson, M.D., etal. (2013) Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome. Genome Res [Epub ahead of print].
-
(2013)
Genome Res
-
-
Omasits, U.1
Quebatte, M.2
Stekhoven, D.J.3
Fortes, C.4
Roschitzki, B.5
Robinson, M.D.6
-
56
-
-
0035095849
-
Two RpoH homologs responsible for the expression of heat shock protein genes in Sinorhizobium meliloti
-
Ono, Y., Mitsui, H., Sato, T., and Minamisawa, K. (2001) Two RpoH homologs responsible for the expression of heat shock protein genes in Sinorhizobium meliloti. Mol Gen Genet 264: 902-912.
-
(2001)
Mol Gen Genet
, vol.264
, pp. 902-912
-
-
Ono, Y.1
Mitsui, H.2
Sato, T.3
Minamisawa, K.4
-
57
-
-
80053264411
-
Regulation of alternative sigma factor use
-
Österberg, S., del Peso-Santos, T., and Shingler, V. (2011) Regulation of alternative sigma factor use. Annu Rev Microbiol 65: 37-55.
-
(2011)
Annu Rev Microbiol
, vol.65
, pp. 37-55
-
-
Österberg, S.1
del Peso-Santos, T.2
Shingler, V.3
-
58
-
-
4043069926
-
DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP
-
Paul, B.J., Barker, M.M., Ross, W., Schneider, D.A., Webb, C., Foster, J.W., and Gourse, R.L. (2004) DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP. Cell 118: 311-322.
-
(2004)
Cell
, vol.118
, pp. 311-322
-
-
Paul, B.J.1
Barker, M.M.2
Ross, W.3
Schneider, D.A.4
Webb, C.5
Foster, J.W.6
Gourse, R.L.7
-
59
-
-
4043108470
-
Regulation through the secondary channel-structural framework for ppGpp-DksA synergism during transcription
-
Perederina, A., Svetlov, V., Vassylyeva, M.N., Tahirov, T.H., Yokoyama, S., Artsimovitch, I., and Vassylyev, D.G. (2004) Regulation through the secondary channel-structural framework for ppGpp-DksA synergism during transcription. Cell 118: 297-309.
-
(2004)
Cell
, vol.118
, pp. 297-309
-
-
Perederina, A.1
Svetlov, V.2
Vassylyeva, M.N.3
Tahirov, T.H.4
Yokoyama, S.5
Artsimovitch, I.6
Vassylyev, D.G.7
-
60
-
-
18444362128
-
DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters
-
Perron, K., Comte, R., and van Delden, C. (2005) DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters. Mol Microbiol 56: 1087-1102.
-
(2005)
Mol Microbiol
, vol.56
, pp. 1087-1102
-
-
Perron, K.1
Comte, R.2
van Delden, C.3
-
61
-
-
33744962968
-
Antagonistic regulation of Escherichia coli ribosomal RNA rrnB P1 promoter activity by GreA and DksA
-
Potrykus, K., Vinella, D., Murphy, H., Szalewska-Palasz, A., D'Ari, R., and Cashel, M. (2006) Antagonistic regulation of Escherichia coli ribosomal RNA rrnB P1 promoter activity by GreA and DksA. J Biol Chem 281: 15238-15248.
-
(2006)
J Biol Chem
, vol.281
, pp. 15238-15248
-
-
Potrykus, K.1
Vinella, D.2
Murphy, H.3
Szalewska-Palasz, A.4
D'Ari, R.5
Cashel, M.6
-
62
-
-
77954378240
-
The BatR/BatS two-component regulatory system controls the adaptive response of Bartonella henselae during human endothelial cell infection
-
Quebatte, M., Dehio, M., Tropel, D., Basler, A., Toller, I., Raddatz, G., etal. (2010) The BatR/BatS two-component regulatory system controls the adaptive response of Bartonella henselae during human endothelial cell infection. J Bacteriol 192: 3352-3367.
-
(2010)
J Bacteriol
, vol.192
, pp. 3352-3367
-
-
Quebatte, M.1
Dehio, M.2
Tropel, D.3
Basler, A.4
Toller, I.5
Raddatz, G.6
-
63
-
-
84857670095
-
Hemin binding protein C is found in outer membrane vesicles and protects Bartonella henselae against toxic concentrations of hemin
-
Roden, J.A., Wells, D.H., Chomel, B.B., Kasten, R.W., and Koehler, J.E. (2012) Hemin binding protein C is found in outer membrane vesicles and protects Bartonella henselae against toxic concentrations of hemin. Infect Immun 80: 929-942.
-
(2012)
Infect Immun
, vol.80
, pp. 929-942
-
-
Roden, J.A.1
Wells, D.H.2
Chomel, B.B.3
Kasten, R.W.4
Koehler, J.E.5
-
64
-
-
0242693171
-
Brucella stationary-phase gene expression and virulence
-
Roop, R.M., Gee, J.M., Robertson, G.T., Richardson, J.M., Ng, W.L., and Winkler, M.E. (2003) Brucella stationary-phase gene expression and virulence. Annu Rev Microbiol 57: 57-76.
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 57-76
-
-
Roop, R.M.1
Gee, J.M.2
Robertson, G.T.3
Richardson, J.M.4
Ng, W.L.5
Winkler, M.E.6
-
65
-
-
84887140246
-
The magic spot: a ppGpp binding site on E. coli RNA polymerase responsible for regulation of transcription initiation
-
Ross, W., Vrentas, C.E., Sanchez-Vazquez, P., Gaal, T., and Gourse, R.L. (2013) The magic spot: a ppGpp binding site on E. coli RNA polymerase responsible for regulation of transcription initiation. Mol Cell 50: 420-429.
-
(2013)
Mol Cell
, vol.50
, pp. 420-429
-
-
Ross, W.1
Vrentas, C.E.2
Sanchez-Vazquez, P.3
Gaal, T.4
Gourse, R.L.5
-
66
-
-
33646851752
-
Pushing the envelope: extracytoplasmic stress responses in bacterial pathogens
-
Rowley, G., Spector, M., Kormanec, J., and Roberts, M. (2006) Pushing the envelope: extracytoplasmic stress responses in bacterial pathogens. Nat Rev Microbiol 4: 383-394.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 383-394
-
-
Rowley, G.1
Spector, M.2
Kormanec, J.3
Roberts, M.4
-
67
-
-
36548999782
-
Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors
-
Saenz, H.L., Engel, P., Stoeckli, M.C., Lanz, C., Raddatz, G., Vayssier-Taussat, M., etal. (2007) Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors. Nat Genet 39: 1469-1476.
-
(2007)
Nat Genet
, vol.39
, pp. 1469-1476
-
-
Saenz, H.L.1
Engel, P.2
Stoeckli, M.C.3
Lanz, C.4
Raddatz, G.5
Vayssier-Taussat, M.6
-
68
-
-
79955001660
-
Mechanisms of pH control in the midgut of Lutzomyia longipalpis: roles for ingested molecules and hormones
-
Santos, V.C., Nunes, C.A., Pereira, M.H., and Gontijo, N.F. (2011) Mechanisms of pH control in the midgut of Lutzomyia longipalpis: roles for ingested molecules and hormones. J Exp Biol 214: 1411-1418.
-
(2011)
J Exp Biol
, vol.214
, pp. 1411-1418
-
-
Santos, V.C.1
Nunes, C.A.2
Pereira, M.H.3
Gontijo, N.F.4
-
69
-
-
34249796382
-
An extracytoplasmic function sigma factor acts as a general stress response regulator in Sinorhizobium meliloti
-
Sauviac, L., Philippe, H., Phok, K., and Bruand, C. (2007) An extracytoplasmic function sigma factor acts as a general stress response regulator in Sinorhizobium meliloti. J Bacteriol 189: 4204-4216.
-
(2007)
J Bacteriol
, vol.189
, pp. 4204-4216
-
-
Sauviac, L.1
Philippe, H.2
Phok, K.3
Bruand, C.4
-
70
-
-
1942520221
-
The VirB type IV secretion system of Bartonella henselae mediates invasion, proinflammatory activation and antiapoptotic protection of endothelial cells
-
Schmid, M.C., Schulein, R., Dehio, M., Denecker, G., Carena, I., and Dehio, C. (2004) The VirB type IV secretion system of Bartonella henselae mediates invasion, proinflammatory activation and antiapoptotic protection of endothelial cells. Mol Microbiol 52: 81-92.
-
(2004)
Mol Microbiol
, vol.52
, pp. 81-92
-
-
Schmid, M.C.1
Schulein, R.2
Dehio, M.3
Denecker, G.4
Carena, I.5
Dehio, C.6
-
71
-
-
0036433666
-
The VirB/VirD4 type IV secretion system of Bartonella is essential for establishing intraerythrocytic infection
-
Schulein, R., and Dehio, C. (2002) The VirB/VirD4 type IV secretion system of Bartonella is essential for establishing intraerythrocytic infection. Mol Microbiol 46: 1053-1067.
-
(2002)
Mol Microbiol
, vol.46
, pp. 1053-1067
-
-
Schulein, R.1
Dehio, C.2
-
72
-
-
14144255575
-
A bipartite signal mediates the transfer of type IV secretion substrates of Bartonella henselae into human cells
-
Schulein, R., Guye, P., Rhomberg, T.A., Schmid, M.C., Schröder, G., Vergunst, A.C., etal. (2005) A bipartite signal mediates the transfer of type IV secretion substrates of Bartonella henselae into human cells. Proc Natl Acad Sci USA 102: 856-861.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 856-861
-
-
Schulein, R.1
Guye, P.2
Rhomberg, T.A.3
Schmid, M.C.4
Schröder, G.5
Vergunst, A.C.6
-
73
-
-
0036197801
-
Bacterial persistence within erythrocytes: a unique pathogenic strategy of Bartonella spp.
-
Seubert, A., Schulein, R., and Dehio, C. (2002) Bacterial persistence within erythrocytes: a unique pathogenic strategy of Bartonella spp. Int J Med Microbiol 291: 555-560.
-
(2002)
Int J Med Microbiol
, vol.291
, pp. 555-560
-
-
Seubert, A.1
Schulein, R.2
Dehio, C.3
-
74
-
-
0141454925
-
A bacterial conjugation machinery recruited for pathogenesis
-
Seubert, A., Hiestand, R., Cruz, F., and Dehio, C. (2003) A bacterial conjugation machinery recruited for pathogenesis. Mol Microbiol 49: 1253-1266.
-
(2003)
Mol Microbiol
, vol.49
, pp. 1253-1266
-
-
Seubert, A.1
Hiestand, R.2
Cruz, F.3
Dehio, C.4
-
75
-
-
79953328955
-
Signal sensory systems that impact sigma(5)(4)-dependent transcription
-
Shingler, V. (2011) Signal sensory systems that impact sigma(5)(4)-dependent transcription. FEMS Microbiol Rev 35: 425-440.
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 425-440
-
-
Shingler, V.1
-
76
-
-
77952580705
-
A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate
-
Spangler, C., Böhm, A., Jenal, U., Seifert, R., and Kaever, V. (2010) A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate. J Microbiol Methods 81: 226-231.
-
(2010)
J Microbiol Methods
, vol.81
, pp. 226-231
-
-
Spangler, C.1
Böhm, A.2
Jenal, U.3
Seifert, R.4
Kaever, V.5
-
77
-
-
75549092201
-
The MiST2 database: a comprehensive genomics resource on microbial signal transduction
-
Ulrich, L.E., and Zhulin, I.B. (2010) The MiST2 database: a comprehensive genomics resource on microbial signal transduction. Nucleic Acids Res 38: D401-D407.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Ulrich, L.E.1
Zhulin, I.B.2
-
78
-
-
77954687617
-
The Trw type IV secretion system of Bartonella mediates host-specific adhesion to erythrocytes
-
Vayssier-Taussat, M., Le Rhun, D., Deng, H.K., Biville, F., Cescau, S., Danchin, A., etal. (2010) The Trw type IV secretion system of Bartonella mediates host-specific adhesion to erythrocytes. PLoS Pathog 6: e1000946.
-
(2010)
PLoS Pathog
, vol.6
-
-
Vayssier-Taussat, M.1
Le Rhun, D.2
Deng, H.K.3
Biville, F.4
Cescau, S.5
Danchin, A.6
-
79
-
-
79951557166
-
Stress response regulators identified through genome-wide transcriptome analysis of the (p)ppGpp-dependent response in Rhizobium etli
-
Vercruysse, M., Fauvart, M., Jans, A., Beullens, S., Braeken, K., Cloots, L., etal. (2011) Stress response regulators identified through genome-wide transcriptome analysis of the (p)ppGpp-dependent response in Rhizobium etli. Genome Biol 12: R17.
-
(2011)
Genome Biol
, vol.12
-
-
Vercruysse, M.1
Fauvart, M.2
Jans, A.3
Beullens, S.4
Braeken, K.5
Cloots, L.6
-
80
-
-
84855898808
-
Effects on growth by changes of the balance between GreA, GreB, and DksA suggest mutual competition and functional redundancy in Escherichia coli
-
Vinella, D., Potrykus, K., Murphy, H., and Cashel, M. (2012) Effects on growth by changes of the balance between GreA, GreB, and DksA suggest mutual competition and functional redundancy in Escherichia coli. J Bacteriol 194: 261-273.
-
(2012)
J Bacteriol
, vol.194
, pp. 261-273
-
-
Vinella, D.1
Potrykus, K.2
Murphy, H.3
Cashel, M.4
-
81
-
-
84874762979
-
The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013
-
Vizcaino, J.A., Cote, R.G., Csordas, A., Dianes, J.A., Fabregat, A., Foster, J.M., etal. (2013) The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013. Nucleic Acids Res 41: D1063-D1069.
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Vizcaino, J.A.1
Cote, R.G.2
Csordas, A.3
Dianes, J.A.4
Fabregat, A.5
Foster, J.M.6
-
82
-
-
25844499174
-
Response of RNA polymerase to ppGpp: requirement for the omega subunit and relief of this requirement by DksA
-
Vrentas, C.E., Gaal, T., Ross, W., Ebright, R.H., and Gourse, R.L. (2005) Response of RNA polymerase to ppGpp: requirement for the omega subunit and relief of this requirement by DksA. Genes Dev 19: 2378-2387.
-
(2005)
Genes Dev
, vol.19
, pp. 2378-2387
-
-
Vrentas, C.E.1
Gaal, T.2
Ross, W.3
Ebright, R.H.4
Gourse, R.L.5
-
83
-
-
0032830481
-
Evolution of aminoacyl-tRNA synthetases - analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events
-
Wolf, Y.I., Aravind, L., Grishin, N.V., and Koonin, E.V. (1999) Evolution of aminoacyl-tRNA synthetases - analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events. Genome Res 9: 689-710.
-
(1999)
Genome Res
, vol.9
, pp. 689-710
-
-
Wolf, Y.I.1
Aravind, L.2
Grishin, N.V.3
Koonin, E.V.4
-
84
-
-
4544295635
-
A family of variably expressed outer-membrane proteins (Vomp) mediates adhesion and autoaggregation in Bartonella quintana
-
Zhang, P., Chomel, B.B., Schau, M.K., Goo, J.S., Droz, S., Kelminson, K.L., etal. (2004) A family of variably expressed outer-membrane proteins (Vomp) mediates adhesion and autoaggregation in Bartonella quintana. Proc Natl Acad Sci USA 101: 13630-13635.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 13630-13635
-
-
Zhang, P.1
Chomel, B.B.2
Schau, M.K.3
Goo, J.S.4
Droz, S.5
Kelminson, K.L.6
-
85
-
-
84887143299
-
The mechanism of E. coli RNA polymerase regulation by ppGpp is suggested by the structure of their complex
-
Zuo, Y., Wang, Y., and Steitz, T.A. (2013) The mechanism of E. coli RNA polymerase regulation by ppGpp is suggested by the structure of their complex. Mol Cell 50: 430-436.
-
(2013)
Mol Cell
, vol.50
, pp. 430-436
-
-
Zuo, Y.1
Wang, Y.2
Steitz, T.A.3
|