-
1
-
-
47349095948
-
Rhizobial secreted proteins as determinants of host specificity in the rhizobium-legume symbiosis.
-
10.1111/j.1574-6968.2008.01254.x, 18616593
-
Fauvart M, Michiels J. Rhizobial secreted proteins as determinants of host specificity in the rhizobium-legume symbiosis. FEMS Microbiol Lett 2008, 285:1-9. 10.1111/j.1574-6968.2008.01254.x, 18616593.
-
(2008)
FEMS Microbiol Lett
, vol.285
, pp. 1-9
-
-
Fauvart, M.1
Michiels, J.2
-
2
-
-
58549105954
-
Molecular determinants of a symbiotic chronic infection.
-
10.1146/annurev.genet.42.110807.091427, 2770587, 18983260
-
Gibson KE, Kobayashi H, Walker GC. Molecular determinants of a symbiotic chronic infection. Annu Rev Genet 2008, 42:413-441. 10.1146/annurev.genet.42.110807.091427, 2770587, 18983260.
-
(2008)
Annu Rev Genet
, vol.42
, pp. 413-441
-
-
Gibson, K.E.1
Kobayashi, H.2
Walker, G.C.3
-
3
-
-
70349319658
-
Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes?
-
10.1016/j.tim.2009.07.004, 19766492
-
Masson-Boivin C, Giraud E, Perret X, Batut J. Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes?. Trends Microbiol 2009, 17:458-466. 10.1016/j.tim.2009.07.004, 19766492.
-
(2009)
Trends Microbiol
, vol.17
, pp. 458-466
-
-
Masson-Boivin, C.1
Giraud, E.2
Perret, X.3
Batut, J.4
-
4
-
-
75749131070
-
The roles of extracellular proteins, polysaccharides and signals in the interactions of rhizobia with legume roots.
-
10.1111/j.1574-6976.2009.00205.x, 20070373
-
Downie JA. The roles of extracellular proteins, polysaccharides and signals in the interactions of rhizobia with legume roots. FEMS Microbiol Rev 2010, 34:150-170. 10.1111/j.1574-6976.2009.00205.x, 20070373.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 150-170
-
-
Downie, J.A.1
-
5
-
-
77953206924
-
Stationary phase in gram-negative bacteria.
-
10.1111/j.1574-6976.2010.00213.x, 20236330
-
Navarro Llorens JM, Tormo A, Martinez-Garcia E. Stationary phase in gram-negative bacteria. FEMS Microbiol Rev 2010, 34:476-495. 10.1111/j.1574-6976.2010.00213.x, 20236330.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 476-495
-
-
Navarro Llorens, J.M.1
Tormo, A.2
Martinez-Garcia, E.3
-
6
-
-
0037109068
-
Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis.
-
10.1073/pnas.212510999, 129697, 12374860
-
Tani TH, Khodursky A, Blumenthal RM, Brown PO, Matthews RG. Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis. Proc Natl Acad Sci USA 2002, 99:13471-13476. 10.1073/pnas.212510999, 129697, 12374860.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 13471-13476
-
-
Tani, T.H.1
Khodursky, A.2
Blumenthal, R.M.3
Brown, P.O.4
Matthews, R.G.5
-
7
-
-
45449090551
-
(p)ppGpp: Still Magical? (*).
-
10.1146/annurev.micro.62.081307.162903, 18454629
-
Potrykus K, Cashel M. (p)ppGpp: Still Magical? (*). Annu Rev Microbiol 2008, 62:35-51. 10.1146/annurev.micro.62.081307.162903, 18454629.
-
(2008)
Annu Rev Microbiol
, vol.62
, pp. 35-51
-
-
Potrykus, K.1
Cashel, M.2
-
8
-
-
0036069537
-
Gene expression profiling of Escherichia coli growth transitions: an expanded stringent response model.
-
10.1046/j.1365-2958.2002.03001.x, 12123445
-
Chang DE, Smalley DJ, Conway T. Gene expression profiling of Escherichia coli growth transitions: an expanded stringent response model. Mol Microbiol 2002, 45:289-306. 10.1046/j.1365-2958.2002.03001.x, 12123445.
-
(2002)
Mol Microbiol
, vol.45
, pp. 289-306
-
-
Chang, D.E.1
Smalley, D.J.2
Conway, T.3
-
9
-
-
33144488588
-
Guanosine 3',5'-bispyrophosphate coordinates global gene expression during glucose-lactose diauxie in Escherichia coli.
-
10.1073/pnas.0510995103, 1413745, 16467149
-
Traxler MF, Chang DE, Conway T. Guanosine 3',5'-bispyrophosphate coordinates global gene expression during glucose-lactose diauxie in Escherichia coli. Proc Natl Acad Sci USA 2006, 103:2374-2379. 10.1073/pnas.0510995103, 1413745, 16467149.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 2374-2379
-
-
Traxler, M.F.1
Chang, D.E.2
Conway, T.3
-
10
-
-
30344476728
-
New horizons for (p)ppGpp in bacterial and plant physiology.
-
10.1016/j.tim.2005.11.006, 16343907
-
Braeken K, Moris M, Daniels R, Vanderleyden J, Michiels J. New horizons for (p)ppGpp in bacterial and plant physiology. Trends Microbiol 2006, 14:45-54. 10.1016/j.tim.2005.11.006, 16343907.
-
(2006)
Trends Microbiol
, vol.14
, pp. 45-54
-
-
Braeken, K.1
Moris, M.2
Daniels, R.3
Vanderleyden, J.4
Michiels, J.5
-
11
-
-
73649096202
-
The synthesis and function of the alarmone (p)ppGpp in firmicutes.
-
10.1016/j.ijmm.2009.08.017, 19783475
-
Wolz C, Geiger T, Goerke C. The synthesis and function of the alarmone (p)ppGpp in firmicutes. Int J Med Microbiol 2010, 300:142-147. 10.1016/j.ijmm.2009.08.017, 19783475.
-
(2010)
Int J Med Microbiol
, vol.300
, pp. 142-147
-
-
Wolz, C.1
Geiger, T.2
Goerke, C.3
-
12
-
-
18044367581
-
PpGpp: a global regulator in Escherichia coli.
-
10.1016/j.tim.2005.03.008, 15866041
-
Magnusson LU, Farewell A, Nystrom T. ppGpp: a global regulator in Escherichia coli. Trends Microbiol 2005, 13:236-242. 10.1016/j.tim.2005.03.008, 15866041.
-
(2005)
Trends Microbiol
, vol.13
, pp. 236-242
-
-
Magnusson, L.U.1
Farewell, A.2
Nystrom, T.3
-
13
-
-
42149158392
-
Control of bacterial transcription, translation and replication by (p)ppGpp.
-
10.1016/j.mib.2008.02.001, 18359660
-
Srivatsan A, Wang JD. Control of bacterial transcription, translation and replication by (p)ppGpp. Curr Opin Microbiol 2008, 11:100-105. 10.1016/j.mib.2008.02.001, 18359660.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 100-105
-
-
Srivatsan, A.1
Wang, J.D.2
-
14
-
-
0035951305
-
Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro.
-
10.1006/jmbi.2000.4327, 11162084
-
Barker MM, Gaal T, Josaitis CA, Gourse RL. Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro. J Mol Biol 2001, 305:673-688. 10.1006/jmbi.2000.4327, 11162084.
-
(2001)
J Mol Biol
, vol.305
, pp. 673-688
-
-
Barker, M.M.1
Gaal, T.2
Josaitis, C.A.3
Gourse, R.L.4
-
15
-
-
68249138705
-
Increased RNA polymerase availability directs resources towards growth at the expense of maintenance.
-
10.1038/emboj.2009.181, 2726692, 19574956
-
Gummesson B, Magnusson LU, Lovmar M, Kvint K, Persson O, Ballesteros M, Farewell A, Nystrom T. Increased RNA polymerase availability directs resources towards growth at the expense of maintenance. EMBO J 2009, 28:2209-2219. 10.1038/emboj.2009.181, 2726692, 19574956.
-
(2009)
EMBO J
, vol.28
, pp. 2209-2219
-
-
Gummesson, B.1
Magnusson, L.U.2
Lovmar, M.3
Kvint, K.4
Persson, O.5
Ballesteros, M.6
Farewell, A.7
Nystrom, T.8
-
16
-
-
0037093379
-
Regulation of sigma factor competition by the alarmone ppGpp.
-
10.1101/gad.227902, 186289, 12023304
-
Jishage M, Kvint K, Shingler V, Nystrom T. Regulation of sigma factor competition by the alarmone ppGpp. Genes Dev 2002, 16:1260-1270. 10.1101/gad.227902, 186289, 12023304.
-
(2002)
Genes Dev
, vol.16
, pp. 1260-1270
-
-
Jishage, M.1
Kvint, K.2
Shingler, V.3
Nystrom, T.4
-
17
-
-
33645860823
-
The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription.
-
10.1111/j.1365-2958.2006.05129.x, 16629675
-
Bernardo LM, Johansson LU, Solera D, Skarfstad E, Shingler V. The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription. Mol Microbiol 2006, 60:749-764. 10.1111/j.1365-2958.2006.05129.x, 16629675.
-
(2006)
Mol Microbiol
, vol.60
, pp. 749-764
-
-
Bernardo, L.M.1
Johansson, L.U.2
Solera, D.3
Skarfstad, E.4
Shingler, V.5
-
18
-
-
38649092391
-
Transcription profiling of the stringent response in Escherichia coli.
-
10.1128/JB.01092-07, 2223561, 18039766
-
Durfee T, Hansen AM, Zhi H, Blattner FR, Jin DJ. Transcription profiling of the stringent response in Escherichia coli. J Bacteriol 2008, 190:1084-1096. 10.1128/JB.01092-07, 2223561, 18039766.
-
(2008)
J Bacteriol
, vol.190
, pp. 1084-1096
-
-
Durfee, T.1
Hansen, A.M.2
Zhi, H.3
Blattner, F.R.4
Jin, D.J.5
-
19
-
-
65549155326
-
Similar and divergent effects of ppGpp and DksA deficiencies on transcription in Escherichia coli.
-
10.1128/JB.01410-08, 2687150, 19251846
-
Aberg A, Fernandez-Vazquez J, Cabrer-Panes JD, Sanchez A, Balsalobre C. Similar and divergent effects of ppGpp and DksA deficiencies on transcription in Escherichia coli. J Bacteriol 2009, 191:3226-3236. 10.1128/JB.01410-08, 2687150, 19251846.
-
(2009)
J Bacteriol
, vol.191
, pp. 3226-3236
-
-
Aberg, A.1
Fernandez-Vazquez, J.2
Cabrer-Panes, J.D.3
Sanchez, A.4
Balsalobre, C.5
-
20
-
-
77950211392
-
Distinct roles of ppGpp and DksA in Legionella pneumophila differentiation.
-
10.1111/j.1365-2958.2010.07094.x, 20199605
-
Dalebroux ZD, Yagi BF, Sahr T, Buchrieser C, Swanson MS. Distinct roles of ppGpp and DksA in Legionella pneumophila differentiation. Mol Microbiol 2010, 76:200-219. 10.1111/j.1365-2958.2010.07094.x, 20199605.
-
(2010)
Mol Microbiol
, vol.76
, pp. 200-219
-
-
Dalebroux, Z.D.1
Yagi, B.F.2
Sahr, T.3
Buchrieser, C.4
Swanson, M.S.5
-
21
-
-
71449126044
-
RelA regulates virulence and intracellular survival of Francisella novicida.
-
10.1099/mic.0.031021-0, 19762448
-
Dean RE, Ireland PM, Jordan JE, Titball RW, Oyston PC. RelA regulates virulence and intracellular survival of Francisella novicida. Microbiology 2009, 155:4104-4113. 10.1099/mic.0.031021-0, 19762448.
-
(2009)
Microbiology
, vol.155
, pp. 4104-4113
-
-
Dean, R.E.1
Ireland, P.M.2
Jordan, J.E.3
Titball, R.W.4
Oyston, P.C.5
-
22
-
-
71049134394
-
The (p)ppGpp synthetase RelA contributes to stress adaptation and virulence in Enterococcus faecalis V583.
-
10.1099/mic.0.026146-0, 19608607
-
Yan X, Zhao C, Budin-Verneuil A, Hartke A, Rince A, Gilmore MS, Auffray Y, Pichereau V. The (p)ppGpp synthetase RelA contributes to stress adaptation and virulence in Enterococcus faecalis V583. Microbiology 2009, 155:3226-3237. 10.1099/mic.0.026146-0, 19608607.
-
(2009)
Microbiology
, vol.155
, pp. 3226-3237
-
-
Yan, X.1
Zhao, C.2
Budin-Verneuil, A.3
Hartke, A.4
Rince, A.5
Gilmore, M.S.6
Auffray, Y.7
Pichereau, V.8
-
23
-
-
65349087300
-
Roles of rel in stringent response, global regulation and virulence of serotype 2 Streptococcus pneumoniae D39.
-
10.1111/j.1365-2958.2009.06669.x, 2739083, 19426208
-
Kazmierczak KM, Wayne KJ, Rechtsteiner A, Winkler ME. Roles of rel in stringent response, global regulation and virulence of serotype 2 Streptococcus pneumoniae D39. Mol Microbiol 2009, 72:590-611. 10.1111/j.1365-2958.2009.06669.x, 2739083, 19426208.
-
(2009)
Mol Microbiol
, vol.72
, pp. 590-611
-
-
Kazmierczak, K.M.1
Wayne, K.J.2
Rechtsteiner, A.3
Winkler, M.E.4
-
24
-
-
77952902996
-
PpGpp conjures bacterial virulence.
-
10.1128/MMBR.00046-09, 20508246
-
Dalebroux ZD, Svensson SL, Gaynor EC, Swanson MS. ppGpp conjures bacterial virulence. Microbiol Mol Biol Rev 2010, 74:171-199. 10.1128/MMBR.00046-09, 20508246.
-
(2010)
Microbiol Mol Biol Rev
, vol.74
, pp. 171-199
-
-
Dalebroux, Z.D.1
Svensson, S.L.2
Gaynor, E.C.3
Swanson, M.S.4
-
25
-
-
0028149835
-
Expression of the genes coding for the Escherichia coli integration host factor are controlled by growth phase, rpoS, ppGpp and by autoregulation.
-
10.1111/j.1365-2958.1994.tb01336.x, 7715442
-
Aviv M, Giladi H, Schreiber G, Oppenheim AB, Glaser G. Expression of the genes coding for the Escherichia coli integration host factor are controlled by growth phase, rpoS, ppGpp and by autoregulation. Mol Microbiol 1994, 14:1021-1031. 10.1111/j.1365-2958.1994.tb01336.x, 7715442.
-
(1994)
Mol Microbiol
, vol.14
, pp. 1021-1031
-
-
Aviv, M.1
Giladi, H.2
Schreiber, G.3
Oppenheim, A.B.4
Glaser, G.5
-
26
-
-
72049100690
-
DksA and ppGpp directly regulate transcription of the Escherichia coli flagellar cascade.
-
10.1111/j.1365-2958.2009.06939.x, 2806482, 19889089
-
Lemke JJ, Durfee T, Gourse RL. DksA and ppGpp directly regulate transcription of the Escherichia coli flagellar cascade. Mol Microbiol 2009, 74:1368-1379. 10.1111/j.1365-2958.2009.06939.x, 2806482, 19889089.
-
(2009)
Mol Microbiol
, vol.74
, pp. 1368-1379
-
-
Lemke, J.J.1
Durfee, T.2
Gourse, R.L.3
-
27
-
-
0036223872
-
The Sinorhizobium meliloti stringent response affects multiple aspects of symbiosis.
-
10.1046/j.1365-2958.2002.02826.x, 11918800
-
Wells DH, Long SR. The Sinorhizobium meliloti stringent response affects multiple aspects of symbiosis. Mol Microbiol 2002, 43:1115-1127. 10.1046/j.1365-2958.2002.02826.x, 11918800.
-
(2002)
Mol Microbiol
, vol.43
, pp. 1115-1127
-
-
Wells, D.H.1
Long, S.R.2
-
28
-
-
22544483526
-
The stringent response is required for amino acid and nitrate utilization, nod factor regulation, nodulation, and nitrogen fixation in Rhizobium etli.
-
10.1128/JB.187.15.5075-5083.2005, 1196017, 16030199
-
Calderon-Flores A, Du Pont G, Huerta-Saquero A, Merchant-Larios H, Servin-Gonzalez L, Duran S. The stringent response is required for amino acid and nitrate utilization, nod factor regulation, nodulation, and nitrogen fixation in Rhizobium etli. J Bacteriol 2005, 187:5075-5083. 10.1128/JB.187.15.5075-5083.2005, 1196017, 16030199.
-
(2005)
J Bacteriol
, vol.187
, pp. 5075-5083
-
-
Calderon-Flores, A.1
Du Pont, G.2
Huerta-Saquero, A.3
Merchant-Larios, H.4
Servin-Gonzalez, L.5
Duran, S.6
-
29
-
-
22544453869
-
Effective symbiosis between Rhizobium etli and Phaseolus vulgaris requires the alarmone ppGpp.
-
10.1128/JB.187.15.5460-5469.2005, 1196010, 16030240
-
Moris M, Braeken K, Schoeters E, Verreth C, Beullens S, Vanderleyden J, Michiels J. Effective symbiosis between Rhizobium etli and Phaseolus vulgaris requires the alarmone ppGpp. J Bacteriol 2005, 187:5460-5469. 10.1128/JB.187.15.5460-5469.2005, 1196010, 16030240.
-
(2005)
J Bacteriol
, vol.187
, pp. 5460-5469
-
-
Moris, M.1
Braeken, K.2
Schoeters, E.3
Verreth, C.4
Beullens, S.5
Vanderleyden, J.6
Michiels, J.7
-
30
-
-
60849094823
-
Pleiotropic effects of a rel mutation on stress survival of Rhizobium etli CNPAF512.
-
10.1186/1471-2180-8-219, 2631030, 19077212
-
Braeken K, Fauvart M, Vercruysse M, Beullens S, Lambrichts I, Michiels J. Pleiotropic effects of a rel mutation on stress survival of Rhizobium etli CNPAF512. BMC Microbiol 2008, 8:219. 10.1186/1471-2180-8-219, 2631030, 19077212.
-
(2008)
BMC Microbiol
, vol.8
, pp. 219
-
-
Braeken, K.1
Fauvart, M.2
Vercruysse, M.3
Beullens, S.4
Lambrichts, I.5
Michiels, J.6
-
31
-
-
33644861233
-
The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.
-
10.1073/pnas.0508502103, 1383491, 16505379
-
Gonzalez V, Santamaria RI, Bustos P, Hernandez-Gonzalez I, Medrano-Soto A, Moreno-Hagelsieb G, Janga SC, Ramirez MA, Jimenez-Jacinto V, Collado-Vides J, Davila G. The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons. Proc Natl Acad Sci USA 2006, 103:3834-3839. 10.1073/pnas.0508502103, 1383491, 16505379.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 3834-3839
-
-
Gonzalez, V.1
Santamaria, R.I.2
Bustos, P.3
Hernandez-Gonzalez, I.4
Medrano-Soto, A.5
Moreno-Hagelsieb, G.6
Janga, S.C.7
Ramirez, M.A.8
Jimenez-Jacinto, V.9
Collado-Vides, J.10
Davila, G.11
-
32
-
-
76949103628
-
Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array.
-
10.1186/1471-2164-11-53, 2881028, 20089193
-
Vercruysse M, Fauvart M, Cloots L, Engelen K, Thijs IM, Marchal K, Michiels J. Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array. BMC Genomics 2010, 11:53. 10.1186/1471-2164-11-53, 2881028, 20089193.
-
(2010)
BMC Genomics
, vol.11
, pp. 53
-
-
Vercruysse, M.1
Fauvart, M.2
Cloots, L.3
Engelen, K.4
Thijs, I.M.5
Marchal, K.6
Michiels, J.7
-
33
-
-
43449090374
-
The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli.
-
10.1111/j.1365-2958.2008.06229.x, 18430135
-
Traxler MF, Summers SM, Nguyen HT, Zacharia VM, Hightower GA, Smith JT, Conway T. The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli. Mol Microbiol 2008, 68:1128-1148. 10.1111/j.1365-2958.2008.06229.x, 18430135.
-
(2008)
Mol Microbiol
, vol.68
, pp. 1128-1148
-
-
Traxler, M.F.1
Summers, S.M.2
Nguyen, H.T.3
Zacharia, V.M.4
Hightower, G.A.5
Smith, J.T.6
Conway, T.7
-
34
-
-
33749189622
-
Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p)ppGpp synthase.
-
10.1186/1471-2164-7-230, 1578569, 16961923
-
Brockmann-Gretza O, Kalinowski J. Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p)ppGpp synthase. BMC Genomics 2006, 7:230. 10.1186/1471-2164-7-230, 1578569, 16961923.
-
(2006)
BMC Genomics
, vol.7
, pp. 230
-
-
Brockmann-Gretza, O.1
Kalinowski, J.2
-
35
-
-
38349086492
-
The global role of ppGpp synthesis in morphological differentiation and antibiotic production in Streptomyces coelicolor A3(2).
-
10.1186/gb-2007-8-8-r161, 2374992, 17683547
-
Hesketh A, Chen WJ, Ryding J, Chang S, Bibb M. The global role of ppGpp synthesis in morphological differentiation and antibiotic production in Streptomyces coelicolor A3(2). Genome Biol 2007, 8:R161. 10.1186/gb-2007-8-8-r161, 2374992, 17683547.
-
(2007)
Genome Biol
, vol.8
-
-
Hesketh, A.1
Chen, W.J.2
Ryding, J.3
Chang, S.4
Bibb, M.5
-
36
-
-
0242386460
-
Identifying global regulators in transcriptional regulatory networks in bacteria.
-
10.1016/j.mib.2003.09.002, 14572541
-
Martinez-Antonio A, Collado-Vides J. Identifying global regulators in transcriptional regulatory networks in bacteria. Curr Opin Microbiol 2003, 6:482-489. 10.1016/j.mib.2003.09.002, 14572541.
-
(2003)
Curr Opin Microbiol
, vol.6
, pp. 482-489
-
-
Martinez-Antonio, A.1
Collado-Vides, J.2
-
37
-
-
33745002894
-
The Rhizobium leguminosarum regulator IrrA affects the transcription of a wide range of genes in response to Fe availability.
-
10.1007/s00438-006-0115-y, 16625355
-
Todd JD, Sawers G, Rodionov DA, Johnston AW. The Rhizobium leguminosarum regulator IrrA affects the transcription of a wide range of genes in response to Fe availability. Mol Genet Genomics 2006, 275:564-577. 10.1007/s00438-006-0115-y, 16625355.
-
(2006)
Mol Genet Genomics
, vol.275
, pp. 564-577
-
-
Todd, J.D.1
Sawers, G.2
Rodionov, D.A.3
Johnston, A.W.4
-
38
-
-
77952352569
-
Heme-responsive DNA binding by the global iron regulator Irr from Rhizobium leguminosarum.
-
10.1074/jbc.M109.067215, 20233710
-
Singleton C, White GF, Todd JD, Marritt SJ, Cheesman MR, Johnston AW, Le Brun NE. Heme-responsive DNA binding by the global iron regulator Irr from Rhizobium leguminosarum. J Biol Chem 2010, 285:16023-16031. 10.1074/jbc.M109.067215, 20233710.
-
(2010)
J Biol Chem
, vol.285
, pp. 16023-16031
-
-
Singleton, C.1
White, G.F.2
Todd, J.D.3
Marritt, S.J.4
Cheesman, M.R.5
Johnston, A.W.6
Le Brun, N.E.7
-
39
-
-
18444368425
-
Iron limitation induces SpoT-dependent accumulation of ppGpp in Escherichia coli.
-
10.1111/j.1365-2958.2005.04601.x, 15853883
-
Vinella D, Albrecht C, Cashel M, D'Ari R. Iron limitation induces SpoT-dependent accumulation of ppGpp in Escherichia coli. Mol Microbiol 2005, 56:958-970. 10.1111/j.1365-2958.2005.04601.x, 15853883.
-
(2005)
Mol Microbiol
, vol.56
, pp. 958-970
-
-
Vinella, D.1
Albrecht, C.2
Cashel, M.3
D'Ari, R.4
-
40
-
-
33845421546
-
Iron starvation triggers the stringent response and induces amino acid biosynthesis for bacillibactin production in Bacillus subtilis.
-
10.1128/JB.01049-06, 1698241, 17012385
-
Miethke M, Westers H, Blom EJ, Kuipers OP, Marahiel MA. Iron starvation triggers the stringent response and induces amino acid biosynthesis for bacillibactin production in Bacillus subtilis. J Bacteriol 2006, 188:8655-8657. 10.1128/JB.01049-06, 1698241, 17012385.
-
(2006)
J Bacteriol
, vol.188
, pp. 8655-8657
-
-
Miethke, M.1
Westers, H.2
Blom, E.J.3
Kuipers, O.P.4
Marahiel, M.A.5
-
41
-
-
14544302196
-
Defence of Rhizobium etli bacteroids against oxidative stress involves a complexly regulated atypical 2-Cys peroxiredoxin.
-
10.1111/j.1365-2958.2005.04457.x, 15686565
-
Dombrecht B, Heusdens C, Beullens S, Verreth C, Mulkers E, Proost P, Vanderleyden J, Michiels J. Defence of Rhizobium etli bacteroids against oxidative stress involves a complexly regulated atypical 2-Cys peroxiredoxin. Mol Microbiol 2005, 55:1207-1221. 10.1111/j.1365-2958.2005.04457.x, 15686565.
-
(2005)
Mol Microbiol
, vol.55
, pp. 1207-1221
-
-
Dombrecht, B.1
Heusdens, C.2
Beullens, S.3
Verreth, C.4
Mulkers, E.5
Proost, P.6
Vanderleyden, J.7
Michiels, J.8
-
42
-
-
67649410398
-
Role of the extracytoplasmic function sigma factor RpoE4 in oxidative and osmotic stress responses in Rhizobium etli.
-
10.1128/JB.01626-08, 2698498, 19376852
-
Martinez-Salazar JM, Salazar E, Encarnacion S, Ramirez-Romero MA, Rivera J. Role of the extracytoplasmic function sigma factor RpoE4 in oxidative and osmotic stress responses in Rhizobium etli. J Bacteriol 2009, 191:4122-4132. 10.1128/JB.01626-08, 2698498, 19376852.
-
(2009)
J Bacteriol
, vol.191
, pp. 4122-4132
-
-
Martinez-Salazar, J.M.1
Salazar, E.2
Encarnacion, S.3
Ramirez-Romero, M.A.4
Rivera, J.5
-
43
-
-
62549164362
-
Sigma factor mimicry involved in regulation of general stress response.
-
10.1073/pnas.0810291106, 2642658, 19218445
-
Francez-Charlot A, Frunzke J, Reichen C, Ebneter JZ, Gourion B, Vorholt JA. Sigma factor mimicry involved in regulation of general stress response. Proc Natl Acad Sci USA 2009, 106:3467-3472. 10.1073/pnas.0810291106, 2642658, 19218445.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 3467-3472
-
-
Francez-Charlot, A.1
Frunzke, J.2
Reichen, C.3
Ebneter, J.Z.4
Gourion, B.5
Vorholt, J.A.6
-
44
-
-
57549107143
-
Regulation by transcription factors in bacteria: beyond description.
-
10.1111/j.1574-6976.2008.00145.x, 2704942, 19076632
-
Balleza E, Lopez-Bojorquez LN, Martinez-Antonio A, Resendis-Antonio O, Lozada-Chavez I, Balderas-Martinez YI, Encarnacion S, Collado-Vides J. Regulation by transcription factors in bacteria: beyond description. FEMS Microbiol Rev 2009, 33:133-151. 10.1111/j.1574-6976.2008.00145.x, 2704942, 19076632.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 133-151
-
-
Balleza, E.1
Lopez-Bojorquez, L.N.2
Martinez-Antonio, A.3
Resendis-Antonio, O.4
Lozada-Chavez, I.5
Balderas-Martinez, Y.I.6
Encarnacion, S.7
Collado-Vides, J.8
-
45
-
-
0033813826
-
Identification of RpoS (sigma(S))-regulated genes in Salmonella enterica serovar typhimurium.
-
10.1128/JB.182.20.5749-5756.2000, 94696, 11004173
-
Ibanez-Ruiz M, Robbe-Saule V, Hermant D, Labrude S, Norel F. Identification of RpoS (sigma(S))-regulated genes in Salmonella enterica serovar typhimurium. J Bacteriol 2000, 182:5749-5756. 10.1128/JB.182.20.5749-5756.2000, 94696, 11004173.
-
(2000)
J Bacteriol
, vol.182
, pp. 5749-5756
-
-
Ibanez-Ruiz, M.1
Robbe-Saule, V.2
Hermant, D.3
Labrude, S.4
Norel, F.5
-
46
-
-
14244256556
-
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity.
-
10.1128/JB.187.5.1591-1603.2005, 1063999, 15716429
-
Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R. Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol 2005, 187:1591-1603. 10.1128/JB.187.5.1591-1603.2005, 1063999, 15716429.
-
(2005)
J Bacteriol
, vol.187
, pp. 1591-1603
-
-
Weber, H.1
Polen, T.2
Heuveling, J.3
Wendisch, V.F.4
Hengge, R.5
-
47
-
-
70350432754
-
The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family.
-
10.1111/j.1365-2958.2009.06870.x, 19737356
-
Staron A, Sofia HJ, Dietrich S, Ulrich LE, Liesegang H, Mascher T. The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family. Mol Microbiol 2009, 74:557-581. 10.1111/j.1365-2958.2009.06870.x, 19737356.
-
(2009)
Mol Microbiol
, vol.74
, pp. 557-581
-
-
Staron, A.1
Sofia, H.J.2
Dietrich, S.3
Ulrich, L.E.4
Liesegang, H.5
Mascher, T.6
-
48
-
-
0037102458
-
YaeL (EcfE) activates the sigma(E) pathway of stress response through a site-2 cleavage of anti-sigma(E), RseA.
-
10.1101/gad.1002302, 186437, 12183368
-
Kanehara K, Ito K, Akiyama Y. YaeL (EcfE) activates the sigma(E) pathway of stress response through a site-2 cleavage of anti-sigma(E), RseA. Genes Dev 2002, 16:2147-2155. 10.1101/gad.1002302, 186437, 12183368.
-
(2002)
Genes Dev
, vol.16
, pp. 2147-2155
-
-
Kanehara, K.1
Ito, K.2
Akiyama, Y.3
-
49
-
-
45249100907
-
The extracytoplasmic stress factor, sigmaE, is required to maintain cell envelope integrity in Escherichia coli.
-
10.1371/journal.pone.0001573, 2215328, 18253509
-
Hayden JD, Ades SE. The extracytoplasmic stress factor, sigmaE, is required to maintain cell envelope integrity in Escherichia coli. PLoS One 2008, 3:e1573. 10.1371/journal.pone.0001573, 2215328, 18253509.
-
(2008)
PLoS One
, vol.3
-
-
Hayden, J.D.1
Ades, S.E.2
-
50
-
-
33751383274
-
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay.
-
10.1111/j.1365-2958.2006.05524.x, 1804206, 17427289
-
Papenfort K, Pfeiffer V, Mika F, Lucchini S, Hinton JC, Vogel J. SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay. Mol Microbiol 2006, 62:1674-1688. 10.1111/j.1365-2958.2006.05524.x, 1804206, 17427289.
-
(2006)
Mol Microbiol
, vol.62
, pp. 1674-1688
-
-
Papenfort, K.1
Pfeiffer, V.2
Mika, F.3
Lucchini, S.4
Hinton, J.C.5
Vogel, J.6
-
51
-
-
33947361601
-
Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coli.
-
10.1128/JB.01243-06, 1855744, 17158661
-
Guisbert E, Rhodius VA, Ahuja N, Witkin E, Gross CA. Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coli. J Bacteriol 2007, 189:1963-1973. 10.1128/JB.01243-06, 1855744, 17158661.
-
(2007)
J Bacteriol
, vol.189
, pp. 1963-1973
-
-
Guisbert, E.1
Rhodius, V.A.2
Ahuja, N.3
Witkin, E.4
Gross, C.A.5
-
52
-
-
58749087362
-
Small non-coding RNAs in Streptomyces coelicolor.
-
10.1093/nar/gkn898, 2602773, 19008244
-
Swiercz JP, Hindra, Bobek J, Haiser HJ, Di Berardo C, Tjaden B, Elliot MA. Small non-coding RNAs in Streptomyces coelicolor. Nucleic Acids Res 2008, 36:7240-7251. 10.1093/nar/gkn898, 2602773, 19008244.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 7240-7251
-
-
Swiercz, J.P.1
Hindra2
Bobek, J.3
Haiser, H.J.4
Di Berardo, C.5
Tjaden, B.6
Elliot, M.A.7
-
53
-
-
56949094523
-
Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis.
-
10.1016/j.gene.2008.09.024, 18948176
-
Saito S, Kakeshita H, Nakamura K. Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis. Gene 2009, 428:2-8. 10.1016/j.gene.2008.09.024, 18948176.
-
(2009)
Gene
, vol.428
, pp. 2-8
-
-
Saito, S.1
Kakeshita, H.2
Nakamura, K.3
-
54
-
-
0021913190
-
Escherichia coli 6S RNA gene is part of a dual-function transcription unit.
-
215021, 2579060
-
Hsu LM, Zagorski J, Wang Z, Fournier MJ. Escherichia coli 6S RNA gene is part of a dual-function transcription unit. J Bacteriol 1985, 161:1162-1170. 215021, 2579060.
-
(1985)
J Bacteriol
, vol.161
, pp. 1162-1170
-
-
Hsu, L.M.1
Zagorski, J.2
Wang, Z.3
Fournier, M.J.4
-
55
-
-
40149091702
-
Studies on the expression of 6S RNA from E. coli: involvement of regulators important for stress and growth adaptation.
-
10.1515/BC.2008.023, 18177266
-
Neusser T, Gildehaus N, Wurm R, Wagner R. Studies on the expression of 6S RNA from E. coli: involvement of regulators important for stress and growth adaptation. Biol Chem 2008, 389:285-297. 10.1515/BC.2008.023, 18177266.
-
(2008)
Biol Chem
, vol.389
, pp. 285-297
-
-
Neusser, T.1
Gildehaus, N.2
Wurm, R.3
Wagner, R.4
-
56
-
-
77949481723
-
Depletion of the non-coding regulatory 6S RNA in E. coli causes a surprising reduction in the expression of the translation machinery.
-
2848244, 20222947
-
Neusser T, Polen T, Geissen R, Wagner R. Depletion of the non-coding regulatory 6S RNA in E. coli causes a surprising reduction in the expression of the translation machinery. BMC Genomics 2010, 11:165. 2848244, 20222947.
-
(2010)
BMC Genomics
, vol.11
, pp. 165
-
-
Neusser, T.1
Polen, T.2
Geissen, R.3
Wagner, R.4
-
57
-
-
42249114323
-
Amino acid starvation and colicin D treatment induce A-site mRNA cleavage in Escherichia coli.
-
10.1016/j.jmb.2008.02.065, 2409371, 18377929
-
Garza-Sanchez F, Gin JG, Hayes CS. Amino acid starvation and colicin D treatment induce A-site mRNA cleavage in Escherichia coli. J Mol Biol 2008, 378:505-519. 10.1016/j.jmb.2008.02.065, 2409371, 18377929.
-
(2008)
J Mol Biol
, vol.378
, pp. 505-519
-
-
Garza-Sanchez, F.1
Gin, J.G.2
Hayes, C.S.3
-
58
-
-
0035212493
-
RelA-Independent amino acid starvation response network of Streptococcus pyogenes.
-
10.1128/JB.183.24.7354-7364.2001, 95584, 11717294
-
Steiner K, Malke H. relA-Independent amino acid starvation response network of Streptococcus pyogenes. J Bacteriol 2001, 183:7354-7364. 10.1128/JB.183.24.7354-7364.2001, 95584, 11717294.
-
(2001)
J Bacteriol
, vol.183
, pp. 7354-7364
-
-
Steiner, K.1
Malke, H.2
-
59
-
-
10044234372
-
RRNA transcription in Escherichia coli.
-
10.1146/annurev.genet.38.072902.091347, 15568992
-
Paul BJ, Ross W, Gaal T, Gourse RL. rRNA transcription in Escherichia coli. Annu Rev Genet 2004, 38:749-770. 10.1146/annurev.genet.38.072902.091347, 15568992.
-
(2004)
Annu Rev Genet
, vol.38
, pp. 749-770
-
-
Paul, B.J.1
Ross, W.2
Gaal, T.3
Gourse, R.L.4
-
60
-
-
0036223585
-
Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.
-
10.1128/JB.184.9.2500-2520.2002, 134987, 11948165
-
Eymann C, Homuth G, Scharf C, Hecker M. Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis. J Bacteriol 2002, 184:2500-2520. 10.1128/JB.184.9.2500-2520.2002, 134987, 11948165.
-
(2002)
J Bacteriol
, vol.184
, pp. 2500-2520
-
-
Eymann, C.1
Homuth, G.2
Scharf, C.3
Hecker, M.4
-
61
-
-
24044505987
-
Lon and ClpP proteases participate in the physiological disintegration of bacterial inclusion bodies.
-
10.1016/j.jbiotec.2005.04.006, 15967532
-
Vera A, Aris A, Carrio M, Gonzalez-Montalban N, Villaverde A. Lon and ClpP proteases participate in the physiological disintegration of bacterial inclusion bodies. J Biotechnol 2005, 119:163-171. 10.1016/j.jbiotec.2005.04.006, 15967532.
-
(2005)
J Biotechnol
, vol.119
, pp. 163-171
-
-
Vera, A.1
Aris, A.2
Carrio, M.3
Gonzalez-Montalban, N.4
Villaverde, A.5
-
62
-
-
34247165146
-
Physiology of tmRNA: what gets tagged and why?.
-
10.1016/j.mib.2007.03.014, 17383929
-
Keiler KC. Physiology of tmRNA: what gets tagged and why?. Curr Opin Microbiol 2007, 10:169-175. 10.1016/j.mib.2007.03.014, 17383929.
-
(2007)
Curr Opin Microbiol
, vol.10
, pp. 169-175
-
-
Keiler, K.C.1
-
63
-
-
0037216549
-
Global role for ClpP-containing proteases in stationary-phase adaptation of Escherichia coli.
-
10.1128/JB.185.1.115-125.2003, 141834, 12486047
-
Weichart D, Querfurth N, Dreger M, Hengge-Aronis R. Global role for ClpP-containing proteases in stationary-phase adaptation of Escherichia coli. J Bacteriol 2003, 185:115-125. 10.1128/JB.185.1.115-125.2003, 141834, 12486047.
-
(2003)
J Bacteriol
, vol.185
, pp. 115-125
-
-
Weichart, D.1
Querfurth, N.2
Dreger, M.3
Hengge-Aronis, R.4
-
64
-
-
0038056150
-
New insights on trehalose: a multifunctional molecule.
-
10.1093/glycob/cwg047, 12626396
-
Elbein AD, Pan YT, Pastuszak I, Carroll D. New insights on trehalose: a multifunctional molecule. Glycobiology 2003, 13:17R-27R. 10.1093/glycob/cwg047, 12626396.
-
(2003)
Glycobiology
, vol.13
-
-
Elbein, A.D.1
Pan, Y.T.2
Pastuszak, I.3
Carroll, D.4
-
65
-
-
77953212368
-
RpoE2 of Sinorhizobium meliloti is necessary for trehalose synthesis and growth in hyperosmotic media.
-
10.1099/mic.0.034850-0, 20223801
-
Flechard M, Fontenelle C, Blanco C, Goude R, Ermel G, Trautwetter A. RpoE2 of Sinorhizobium meliloti is necessary for trehalose synthesis and growth in hyperosmotic media. Microbiology 2010, 156:1708-1718. 10.1099/mic.0.034850-0, 20223801.
-
(2010)
Microbiology
, vol.156
, pp. 1708-1718
-
-
Flechard, M.1
Fontenelle, C.2
Blanco, C.3
Goude, R.4
Ermel, G.5
Trautwetter, A.6
-
66
-
-
47549091250
-
Improvement of drought tolerance and grain yield in common bean by overexpressing trehalose-6-phosphate synthase in rhizobia.
-
10.1094/MPMI-21-7-0958, 18533836
-
Suarez R, Wong A, Ramirez M, Barraza A, Orozco Mdel C, Cevallos MA, Lara M, Hernandez G, Iturriaga G. Improvement of drought tolerance and grain yield in common bean by overexpressing trehalose-6-phosphate synthase in rhizobia. Mol Plant Microbe Interact 2008, 21:958-966. 10.1094/MPMI-21-7-0958, 18533836.
-
(2008)
Mol Plant Microbe Interact
, vol.21
, pp. 958-966
-
-
Suarez, R.1
Wong, A.2
Ramirez, M.3
Barraza, A.4
Orozco Mdel, C.5
Cevallos, M.A.6
Lara, M.7
Hernandez, G.8
Iturriaga, G.9
-
67
-
-
33750479525
-
Acyl carrier protein/SpoT interaction, the switch linking SpoT-dependent stress response to fatty acid metabolism.
-
10.1111/j.1365-2958.2006.05442.x, 17078815
-
Battesti A, Bouveret E. Acyl carrier protein/SpoT interaction, the switch linking SpoT-dependent stress response to fatty acid metabolism. Mol Microbiol 2006, 62:1048-1063. 10.1111/j.1365-2958.2006.05442.x, 17078815.
-
(2006)
Mol Microbiol
, vol.62
, pp. 1048-1063
-
-
Battesti, A.1
Bouveret, E.2
-
68
-
-
0026699336
-
Genes for a second terminal oxidase in Bradyrhizobium japonicum.
-
10.1007/BF00245362, 1444719
-
Bott M, Preisig O, Hennecke H. Genes for a second terminal oxidase in Bradyrhizobium japonicum. Arch Microbiol 1992, 158:335-343. 10.1007/BF00245362, 1444719.
-
(1992)
Arch Microbiol
, vol.158
, pp. 335-343
-
-
Bott, M.1
Preisig, O.2
Hennecke, H.3
-
69
-
-
34447540221
-
Identical, independent, and opposing roles of ppGpp and DksA in Escherichia coli.
-
10.1128/JB.00330-07, 1951846, 17496080
-
Magnusson LU, Gummesson B, Joksimovic P, Farewell A, Nystrom T. Identical, independent, and opposing roles of ppGpp and DksA in Escherichia coli. J Bacteriol 2007, 189:5193-5202. 10.1128/JB.00330-07, 1951846, 17496080.
-
(2007)
J Bacteriol
, vol.189
, pp. 5193-5202
-
-
Magnusson, L.U.1
Gummesson, B.2
Joksimovic, P.3
Farewell, A.4
Nystrom, T.5
-
70
-
-
43849098574
-
Coordinating assembly of a bacterial macromolecular machine.
-
10.1038/nrmicro1887, 18483484
-
Chevance FF, Hughes KT. Coordinating assembly of a bacterial macromolecular machine. Nat Rev Microbiol 2008, 6:455-465. 10.1038/nrmicro1887, 18483484.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 455-465
-
-
Chevance, F.F.1
Hughes, K.T.2
-
71
-
-
0141504234
-
Temperature-sensitive growth and decreased thermotolerance associated with relA mutations in Escherichia coli.
-
10.1128/JB.185.19.5765-5771.2003, 193974, 13129947
-
Yang X, Ishiguro EE. Temperature-sensitive growth and decreased thermotolerance associated with relA mutations in Escherichia coli. J Bacteriol 2003, 185:5765-5771. 10.1128/JB.185.19.5765-5771.2003, 193974, 13129947.
-
(2003)
J Bacteriol
, vol.185
, pp. 5765-5771
-
-
Yang, X.1
Ishiguro, E.E.2
-
72
-
-
39249084651
-
RpoS regulation of gene expression during exponential growth of Escherichia coli K12.
-
10.1007/s00438-007-0311-4, 18158608
-
Dong T, Kirchhof MG, Schellhorn HE. RpoS regulation of gene expression during exponential growth of Escherichia coli K12. Mol Genet Genomics 2008, 279:267-277. 10.1007/s00438-007-0311-4, 18158608.
-
(2008)
Mol Genet Genomics
, vol.279
, pp. 267-277
-
-
Dong, T.1
Kirchhof, M.G.2
Schellhorn, H.E.3
-
73
-
-
0043192889
-
The role of RelMtb-mediated adaptation to stationary phase in long-term persistence of Mycobacterium tuberculosis in mice.
-
10.1073/pnas.1631248100, 187750, 12897239
-
Dahl JL, Kraus CN, Boshoff HI, Doan B, Foley K, Avarbock D, Kaplan G, Mizrahi V, Rubin H, Barry CE. The role of RelMtb-mediated adaptation to stationary phase in long-term persistence of Mycobacterium tuberculosis in mice. Proc Natl Acad Sci USA 2003, 100:10026-10031. 10.1073/pnas.1631248100, 187750, 12897239.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 10026-10031
-
-
Dahl, J.L.1
Kraus, C.N.2
Boshoff, H.I.3
Doan, B.4
Foley, K.5
Avarbock, D.6
Kaplan, G.7
Mizrahi, V.8
Rubin, H.9
Barry, C.E.10
-
74
-
-
77953027489
-
Structure and function of the molecular chaperone Trigger Factor.
-
10.1016/j.bbamcr.2010.01.017, 20132842
-
Hoffmann A, Bukau B, Kramer G. Structure and function of the molecular chaperone Trigger Factor. Biochim Biophys Acta 2010, 1803:650-661. 10.1016/j.bbamcr.2010.01.017, 20132842.
-
(2010)
Biochim Biophys Acta
, vol.1803
, pp. 650-661
-
-
Hoffmann, A.1
Bukau, B.2
Kramer, G.3
-
75
-
-
67650418180
-
The PhyR-sigma(EcfG) signalling cascade is involved in stress response and symbiotic efficiency in Bradyrhizobium japonicum.
-
10.1111/j.1365-2958.2009.06769.x, 19555458
-
Gourion B, Sulser S, Frunzke J, Francez-Charlot A, Stiefel P, Pessi G, Vorholt JA, Fischer HM. The PhyR-sigma(EcfG) signalling cascade is involved in stress response and symbiotic efficiency in Bradyrhizobium japonicum. Mol Microbiol 2009, 73:291-305. 10.1111/j.1365-2958.2009.06769.x, 19555458.
-
(2009)
Mol Microbiol
, vol.73
, pp. 291-305
-
-
Gourion, B.1
Sulser, S.2
Frunzke, J.3
Francez-Charlot, A.4
Stiefel, P.5
Pessi, G.6
Vorholt, J.A.7
Fischer, H.M.8
-
76
-
-
62249222127
-
The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses.
-
10.1099/mic.0.021428-0, 19202087
-
Martinez-Salazar JM, Sandoval-Calderon M, Guo X, Castillo-Ramirez S, Reyes A, Loza MG, Rivera J, Alvarado-Affantranger X, Sanchez F, Gonzalez V, Davila G, Ramirez-Romero MA. The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses. Microbiology 2009, 155:386-397. 10.1099/mic.0.021428-0, 19202087.
-
(2009)
Microbiology
, vol.155
, pp. 386-397
-
-
Martinez-Salazar, J.M.1
Sandoval-Calderon, M.2
Guo, X.3
Castillo-Ramirez, S.4
Reyes, A.5
Loza, M.G.6
Rivera, J.7
Alvarado-Affantranger, X.8
Sanchez, F.9
Gonzalez, V.10
Davila, G.11
Ramirez-Romero, M.A.12
-
77
-
-
34249796382
-
An extracytoplasmic function sigma factor acts as a general stress response regulator in Sinorhizobium meliloti.
-
10.1128/JB.00175-07, 1913381, 17400745
-
Sauviac L, Philippe H, Phok K, Bruand C. An extracytoplasmic function sigma factor acts as a general stress response regulator in Sinorhizobium meliloti. J Bacteriol 2007, 189:4204-4216. 10.1128/JB.00175-07, 1913381, 17400745.
-
(2007)
J Bacteriol
, vol.189
, pp. 4204-4216
-
-
Sauviac, L.1
Philippe, H.2
Phok, K.3
Bruand, C.4
-
78
-
-
57449119691
-
Sinorhizobium meliloti rpoE2 is necessary for H(2)O(2) stress resistance during the stationary growth phase.
-
10.1111/j.1574-6968.2008.01401.x, 19025578
-
Flechard M, Fontenelle C, Trautwetter A, Ermel G, Blanco C. Sinorhizobium meliloti rpoE2 is necessary for H(2)O(2) stress resistance during the stationary growth phase. FEMS Microbiol Lett 2009, 290:25-31. 10.1111/j.1574-6968.2008.01401.x, 19025578.
-
(2009)
FEMS Microbiol Lett
, vol.290
, pp. 25-31
-
-
Flechard, M.1
Fontenelle, C.2
Trautwetter, A.3
Ermel, G.4
Blanco, C.5
-
79
-
-
0032439226
-
The transcriptional regulator gene phrR in Sinorhizobium meliloti WSM419 is regulated by low pH and other stresses.
-
10.1099/00221287-144-12-3335, 9884225
-
Reeve WG, Tiwari RP, Wong CM, Dilworth MJ, Glenn AR. The transcriptional regulator gene phrR in Sinorhizobium meliloti WSM419 is regulated by low pH and other stresses. Microbiology 1998, 144:3335-3342. 10.1099/00221287-144-12-3335, 9884225.
-
(1998)
Microbiology
, vol.144
, pp. 3335-3342
-
-
Reeve, W.G.1
Tiwari, R.P.2
Wong, C.M.3
Dilworth, M.J.4
Glenn, A.R.5
-
80
-
-
0030045148
-
Cloning and characterization of the Bacillus subtilis prkA gene encoding a novel serine protein kinase.
-
10.1016/0378-1119(95)00758-X, 8626065
-
Fischer C, Geourjon C, Bourson C, Deutscher J. Cloning and characterization of the Bacillus subtilis prkA gene encoding a novel serine protein kinase. Gene 1996, 168:55-60. 10.1016/0378-1119(95)00758-X, 8626065.
-
(1996)
Gene
, vol.168
, pp. 55-60
-
-
Fischer, C.1
Geourjon, C.2
Bourson, C.3
Deutscher, J.4
-
81
-
-
40949113533
-
Cloning, expression, purification and characterization of the stress kinase YeaG from Escherichia coli.
-
10.1016/j.pep.2008.01.005, 18276156
-
Tagourti J, Landoulsi A, Richarme G. Cloning, expression, purification and characterization of the stress kinase YeaG from Escherichia coli. Protein Expr Purif 2008, 59:79-85. 10.1016/j.pep.2008.01.005, 18276156.
-
(2008)
Protein Expr Purif
, vol.59
, pp. 79-85
-
-
Tagourti, J.1
Landoulsi, A.2
Richarme, G.3
-
82
-
-
67349171092
-
Protein folding in Escherichia coli: the chaperonin GroE and its substrates.
-
10.1016/j.resmic.2009.04.002, 19393741
-
Masters M, Blakely G, Coulson A, McLennan N, Yerko V, Acord J. Protein folding in Escherichia coli: the chaperonin GroE and its substrates. Res Microbiol 2009, 160:267-277. 10.1016/j.resmic.2009.04.002, 19393741.
-
(2009)
Res Microbiol
, vol.160
, pp. 267-277
-
-
Masters, M.1
Blakely, G.2
Coulson, A.3
McLennan, N.4
Yerko, V.5
Acord, J.6
-
83
-
-
0037432566
-
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
-
10.1016/S0022-2836(03)00205-5, 12662922
-
Eichenberger P, Jensen ST, Conlon EM, van Ooij C, Silvaggi J, Gonzalez-Pastor JE, Fujita M, Ben-Yehuda S, Stragier P, Liu JS, Losick R. The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis. J Mol Biol 2003, 327:945-972. 10.1016/S0022-2836(03)00205-5, 12662922.
-
(2003)
J Mol Biol
, vol.327
, pp. 945-972
-
-
Eichenberger, P.1
Jensen, S.T.2
Conlon, E.M.3
van Ooij, C.4
Silvaggi, J.5
Gonzalez-Pastor, J.E.6
Fujita, M.7
Ben-Yehuda, S.8
Stragier, P.9
Liu, J.S.10
Losick, R.11
-
84
-
-
33750029906
-
The Rcs phosphorelay system is specific to enteric pathogens/commensals and activates ydeI, a gene important for persistent Salmonella infection of mice.
-
10.1111/j.1365-2958.2006.05420.x, 2895427, 17010160
-
Erickson KD, Detweiler CS. The Rcs phosphorelay system is specific to enteric pathogens/commensals and activates ydeI, a gene important for persistent Salmonella infection of mice. Mol Microbiol 2006, 62:883-894. 10.1111/j.1365-2958.2006.05420.x, 2895427, 17010160.
-
(2006)
Mol Microbiol
, vol.62
, pp. 883-894
-
-
Erickson, K.D.1
Detweiler, C.S.2
-
85
-
-
58149185127
-
EcID. A database for the inference of functional interactions in E. coli.
-
10.1093/nar/gkn853, 2686479, 19004873
-
Andres Leon E, Ezkurdia I, Garcia B, Valencia A, Juan D. EcID. A database for the inference of functional interactions in E. coli. Nucleic Acids Res 2009, 37:D629-635. 10.1093/nar/gkn853, 2686479, 19004873.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Andres Leon, E.1
Ezkurdia, I.2
Garcia, B.3
Valencia, A.4
Juan, D.5
-
86
-
-
0032448378
-
Differential regulation of Rhizobium etli rpoN2 gene expression during symbiosis and free-living growth.
-
107331, 9658006
-
Michiels J, Moris M, Dombrecht B, Verreth C, Vanderleyden J. Differential regulation of Rhizobium etli rpoN2 gene expression during symbiosis and free-living growth. J Bacteriol 1998, 180:3620-3628. 107331, 9658006.
-
(1998)
J Bacteriol
, vol.180
, pp. 3620-3628
-
-
Michiels, J.1
Moris, M.2
Dombrecht, B.3
Verreth, C.4
Vanderleyden, J.5
-
87
-
-
0025912682
-
Molecular cloning and nucleotide sequence of the Rhizobium phaseoli recA gene.
-
10.1007/BF00260644, 1832737
-
Michiels J, Vande Broek A, Vanderleyden J. Molecular cloning and nucleotide sequence of the Rhizobium phaseoli recA gene. Mol Gen Genet 1991, 228:486-490. 10.1007/BF00260644, 1832737.
-
(1991)
Mol Gen Genet
, vol.228
, pp. 486-490
-
-
Michiels, J.1
Vande Broek, A.2
Vanderleyden, J.3
-
88
-
-
0028851773
-
Structural and functional analysis of the fixLJ genes of Rhizobium leguminosarum biovar phaseoli CNPAF512.
-
D'Hooghe I, Michiels J, Vlassak K, Verreth C, Waelkens F, Vanderleyden J. Structural and functional analysis of the fixLJ genes of Rhizobium leguminosarum biovar phaseoli CNPAF512. Mol Gen Genet 1995, 249:117-126.
-
(1995)
Mol Gen Genet
, vol.249
, pp. 117-126
-
-
D'Hooghe, I.1
Michiels, J.2
Vlassak, K.3
Verreth, C.4
Waelkens, F.5
Vanderleyden, J.6
-
89
-
-
33645901526
-
Meta-analysis of published transcriptional and translational fold changes reveals a preference for low-fold inductions.
-
10.1089/omi.2006.10.15, 16584315
-
Wren JD, Conway T. Meta-analysis of published transcriptional and translational fold changes reveals a preference for low-fold inductions. OMICS 2006, 10:15-27. 10.1089/omi.2006.10.15, 16584315.
-
(2006)
OMICS
, vol.10
, pp. 15-27
-
-
Wren, J.D.1
Conway, T.2
-
90
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.
-
10.1186/gb-2002-3-7-research0034, 126239, 12184808
-
Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 2002, 3:RESEARCH0034. 10.1186/gb-2002-3-7-research0034, 126239, 12184808.
-
(2002)
Genome Biol
, vol.3
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
91
-
-
37648998605
-
Genetic determinants of swarming in Rhizobium etli.
-
10.1007/s00248-007-9250-1, 17394038
-
Braeken K, Daniels R, Vos K, Fauvart M, Bachaspatimayum D, Vanderleyden J, Michiels J. Genetic determinants of swarming in Rhizobium etli. Microb Ecol 2008, 55:54-64. 10.1007/s00248-007-9250-1, 17394038.
-
(2008)
Microb Ecol
, vol.55
, pp. 54-64
-
-
Braeken, K.1
Daniels, R.2
Vos, K.3
Fauvart, M.4
Bachaspatimayum, D.5
Vanderleyden, J.6
Michiels, J.7
-
92
-
-
79953029072
-
RhizoBase
-
RhizoBase. , http://genome.kazusa.or.jp/rhizobase/
-
-
-
|