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Volumn 108, Issue 4, 2012, Pages 447-455

The recombination landscape in Arabidopsis thaliana F 2 populations

Author keywords

Arabidopsis thaliana; crossover; segregation distortion; SNP

Indexed keywords

ALLELE; CHROMOSOME; EPISTASIS; FRAGMENTATION; FREQUENCY ANALYSIS; GENOMICS; HERB; HERITABILITY; HYBRID; LANDSCAPE; PHENOTYPE; POPULATION STRUCTURE; RECOMBINATION; SEED DORMANCY;

EID: 84858865636     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/hdy.2011.95     Document Type: Article
Times cited : (126)

References (39)
  • 2
    • 0035543134 scopus 로고    scopus 로고
    • Influence of genetic background and heterozygosity on meiotic recombination in Arabidopsis thaliana
    • Barth S, Melchinger AE, Devezi-Savula B, Lübberstedt T (2001). Influence of genetic background and heterozygosity on meiotic recombination in Arabidopsis thaliana. Genome 44: 971-978.
    • (2001) Genome , vol.44 , pp. 971-978
    • Barth, S.1    Melchinger, A.E.2    Devezi-Savula, B.3    Lübberstedt, T.4
  • 3
    • 33750957114 scopus 로고    scopus 로고
    • Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis
    • Bentsink L, Jowett J, Hanhart CJ, Koornneef M (2006). Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis. Proc Natl Acad Sci USA 103: 17042-17047.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 17042-17047
    • Bentsink, L.1    Jowett, J.2    Hanhart, C.J.3    Koornneef, M.4
  • 4
    • 59149093200 scopus 로고    scopus 로고
    • Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana
    • Bikard D, Patel D, Le Mette C, Giorgi V, Camilleri C, Bennett MJ et al. (2009). Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Science 323: 623-626.
    • (2009) Science , vol.323 , pp. 623-626
    • Bikard, D.1    Patel, D.2    Le Mette, C.3    Giorgi, V.4    Camilleri, C.5    Bennett, M.J.6
  • 6
    • 0033911004 scopus 로고    scopus 로고
    • Characterization of human crossover interference
    • Broman KW, Weber JL (2000). Characterization of human crossover interference. Am J Hum Genet 66: 1911-1926.
    • (2000) Am J Hum Genet , vol.66 , pp. 1911-1926
    • Broman, K.W.1    Weber, J.L.2
  • 8
    • 0026218022 scopus 로고
    • A graphical representation of genetic and physical maps: The Marey map
    • Chakravarti A (1991). A graphical representation of genetic and physical maps: The Marey map. Genomics 11: 219-222.
    • (1991) Genomics , vol.11 , pp. 219-222
    • Chakravarti, A.1
  • 9
    • 34547108086 scopus 로고    scopus 로고
    • Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana
    • Clark RM, Schweikert G, Toomajian C, Ossowski S, Zeller G, Shinn P et al. (2007). Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 317: 338-342.
    • (2007) Science , vol.317 , pp. 338-342
    • Clark, R.M.1    Schweikert, G.2    Toomajian, C.3    Ossowski, S.4    Zeller, G.5    Shinn, P.6
  • 11
    • 30044442013 scopus 로고    scopus 로고
    • Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination 'hot spots'
    • Drouaud J, Camilleri C, Bourguignon PY, Canaguier A, Berard A, Vezon D et al. (2006). Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination 'hot spots'. Genome Res 16: 106-114.
    • (2006) Genome Res , vol.16 , pp. 106-114
    • Drouaud, J.1    Camilleri, C.2    Bourguignon, P.Y.3    Canaguier, A.4    Berard, A.5    Vezon, D.6
  • 12
    • 34347349140 scopus 로고    scopus 로고
    • Sexspecific crossover distributions and variations in interference level along Arabidopsis thaliana chromosome 4
    • Drouaud J, Mercier R, Chelysheva L, Berard A, Falque M, Martin O et al. (2007). Sexspecific crossover distributions and variations in interference level along Arabidopsis thaliana chromosome 4. PLoS Genet 3: E106.
    • (2007) PLoS Genet , vol.3
    • Drouaud, J.1    Mercier, R.2    Chelysheva, L.3    Berard, A.4    Falque, M.5    Martin, O.6
  • 13
    • 77951143253 scopus 로고    scopus 로고
    • Dissection of genetically complex traits with extremely large pools of yeast segregants
    • Ehrenreich IM, Torabi N, Jia Y, Kent J, Martis S, Shapiro JA et al. (2010). Dissection of genetically complex traits with extremely large pools of yeast segregants. Nature 464: 1039-1042.
    • (2010) Nature , vol.464 , pp. 1039-1042
    • Ehrenreich, I.M.1    Torabi, N.2    Jia, Y.3    Kent, J.4    Martis, S.5    Shapiro, J.A.6
  • 14
    • 0028967630 scopus 로고
    • A test of a counting model for chiasma interference
    • Foss EJ, Stahl FW (1995). A test of a counting model for chiasma interference. Genetics 139: 1201-1209.
    • (1995) Genetics , vol.139 , pp. 1201-1209
    • Foss, E.J.1    Stahl, F.W.2
  • 15
    • 55749115103 scopus 로고    scopus 로고
    • The qSD12 locus controls offspring tissueimposed seed dormancy in rice
    • Gu XY, Turnipseed EB, Foley ME (2008). The qSD12 locus controls offspring tissueimposed seed dormancy in rice. Genetics 179: 2263-2273.
    • (2008) Genetics , vol.179 , pp. 2263-2273
    • Gu, X.Y.1    Turnipseed, E.B.2    Foley, M.E.3
  • 16
    • 79955468851 scopus 로고    scopus 로고
    • The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
    • Hu TT, Pattyn P, Bakker EG, Cao J, Cheng JF, Clark RM et al. (2011). The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat Genet 43: 476-481.
    • (2011) Nat Genet , vol.43 , pp. 476-481
    • Hu, T.T.1    Pattyn, P.2    Bakker, E.G.3    Cao, J.4    Cheng, J.F.5    Clark, R.M.6
  • 19
    • 48249092245 scopus 로고    scopus 로고
    • Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence
    • Kulathinal RJ, Bennett SM, Fitzpatrick CL, Noor MA (2008). Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence. Proc Natl Acad Sci USA 105: 10051-10056.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 10051-10056
    • Kulathinal, R.J.1    Bennett, S.M.2    Fitzpatrick, C.L.3    Noor, M.A.4
  • 20
  • 21
    • 37349120674 scopus 로고    scopus 로고
    • Transmission ratio distortion in Arabidopsis lyrata: Effects of population divergence and the S-locus
    • Leppala J, Bechsgaard JS, Schierup MH, Savolainen O (2008). Transmission ratio distortion in Arabidopsis lyrata: Effects of population divergence and the S-locus. Heredity 100: 71-78.
    • (2008) Heredity , vol.100 , pp. 71-78
    • Leppala, J.1    Bechsgaard, J.S.2    Schierup, M.H.3    Savolainen, O.4
  • 22
    • 0000012426 scopus 로고
    • Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana
    • Lister C, Dean C (1993). Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J 4: 745-750.
    • (1993) Plant J , vol.4 , pp. 745-750
    • Lister, C.1    Dean, C.2
  • 23
    • 0036950802 scopus 로고    scopus 로고
    • Bay-0Shahdara recombinant inbred line population: A powerful tool for the genetic dissection of complex traits in Arabidopsis
    • Loudet O, Chaillou S, Camilleri C, Bouchez D, Daniel-Vedele F (2002). Bay-0Shahdara recombinant inbred line population: A powerful tool for the genetic dissection of complex traits in Arabidopsis. Theor Appl Genet 104: 1173-1184.
    • (2002) Theor Appl Genet , vol.104 , pp. 1173-1184
    • Loudet, O.1    Chaillou, S.2    Camilleri, C.3    Bouchez, D.4    Daniel-Vedele, F.5
  • 24
    • 40049100813 scopus 로고    scopus 로고
    • Six new recombinant inbred populations for the study of quantitative traits in Arabidopsis thaliana
    • O'Neill CM, Morgan C, Kirby J, Tschoep H, Deng PX, Brennan M et al. (2008). Six new recombinant inbred populations for the study of quantitative traits in Arabidopsis thaliana. Theor Appl Genet 116: 623-634.
    • (2008) Theor Appl Genet , vol.116 , pp. 623-634
    • O'Neill, C.M.1    Morgan, C.2    Kirby, J.3    Tschoep, H.4    Deng, P.X.5    Brennan, M.6
  • 28
    • 79955726394 scopus 로고    scopus 로고
    • Fast-forward genetics enabled by new sequencing technologies
    • Schneeberger K, Weigel D (2011). Fast-forward genetics enabled by new sequencing technologies. Trends Plant Sci 16: 282-288.
    • (2011) Trends Plant Sci , vol.16 , pp. 282-288
    • Schneeberger, K.1    Weigel, D.2
  • 30
    • 45849092254 scopus 로고    scopus 로고
    • Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers
    • Simon M, Loudet O, Durand S, Berard A, Brunel D, Sennesal FX et al. (2008). Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers. Genetics 178: 2253-2264.
    • (2008) Genetics , vol.178 , pp. 2253-2264
    • Simon, M.1    Loudet, O.2    Durand, S.3    Berard, A.4    Brunel, D.5    Sennesal, F.X.6
  • 31
    • 33749380600 scopus 로고    scopus 로고
    • A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization
    • Singer T, Fan Y, Chang HS, Zhu T, Hazen SP, Briggs SP (2006). A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization. PLoS Genet 2: E144.
    • (2006) PLoS Genet , vol.2
    • Singer, T.1    Fan, Y.2    Chang, H.S.3    Zhu, T.4    Hazen, S.P.5    Briggs, S.P.6
  • 33
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 34
    • 0037228473 scopus 로고    scopus 로고
    • Common features of segregation distortion in plants and animals
    • Taylor DR, Ingvarsson PK (2003). Common features of segregation distortion in plants and animals. Genetica 117: 27-35.
    • (2003) Genetica , vol.117 , pp. 27-35
    • Taylor, D.R.1    Ingvarsson, P.K.2
  • 35
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • The Arabidopsis Genome Initiative
    • The Arabidopsis Genome Initiative (2000). Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 36
    • 77953176569 scopus 로고    scopus 로고
    • Gene transposition causing natural variation for growth in Arabidopsis thaliana
    • Vlad D, Rappaport F, Simon M, Loudet O (2010). Gene transposition causing natural variation for growth in Arabidopsis thaliana. PLoS Genet 6: E1000945.
    • (2010) PLoS Genet , vol.6
    • Vlad, D.1    Rappaport, F.2    Simon, M.3    Loudet, O.4
  • 37
    • 35748933185 scopus 로고    scopus 로고
    • MSQT for choosing SNP assays from multiple DNA alignments
    • Warthmann N, Fitz J, Weigel D (2007). MSQT for choosing SNP assays from multiple DNA alignments. Bioinformatics 23: 2784-2787.
    • (2007) Bioinformatics , vol.23 , pp. 2784-2787
    • Warthmann, N.1    Fitz, J.2    Weigel, D.3
  • 38
    • 68249140383 scopus 로고    scopus 로고
    • The 1001 genomes project for Arabidopsis thaliana
    • Weigel D, Mott R (2009). The 1001 genomes project for Arabidopsis thaliana. Genome Biol 10: 107.
    • (2009) Genome Biol , vol.10 , pp. 107
    • Weigel, D.1    Mott, R.2
  • 39
    • 79951827545 scopus 로고    scopus 로고
    • The choice in meiosis-defining the factors that influence crossover or non-crossover formation
    • Youds JL, Boulton SJ (2011). The choice in meiosis-defining the factors that influence crossover or non-crossover formation. J Cell Sci 124: 501-513.
    • (2011) J Cell Sci , vol.124 , pp. 501-513
    • Youds, J.L.1    Boulton, S.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.