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Volumn 14, Issue 10 A, 2004, Pages 1861-1869

Inverted repeat structure of the human genome: The X-chromosome contains a preponderance of large, highly homologous inverted repeated that contain testes genes

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOSOME; CHIMPANZEE; CHROMOSOME 11; CHROMOSOME ARM; CHROMOSOME SIZE; COMPUTER PROGRAM; CONTROLLED STUDY; GENE AMPLIFICATION; GENE CLUSTER; GENE CONVERSION; GENE EXPRESSION; GENE STRUCTURE; GENOME ANALYSIS; GERM LINE; GORILLA; HUMAN; HUMAN GENOME; INVERTED REPEAT; MASKING; MICROCOMPUTER; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; STRUCTURE ANALYSIS; TESTIS; X CHROMOSOME; Y CHROMOSOME;

EID: 6344289639     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.2542904     Document Type: Article
Times cited : (230)

References (38)
  • 3
    • 0036307589 scopus 로고    scopus 로고
    • Extrusion of an imperfect palindrome to a cruciform in superhelical DNA: Complete determination of energetics using a statistical mechanical model
    • Benham, C.J., Savitt, A.G., and Bauer, W.R. 2002. Extrusion of an imperfect palindrome to a cruciform in superhelical DNA: Complete determination of energetics using a statistical mechanical model. J. Mol. Biol. 316: 563-581.
    • (2002) J. Mol. Biol. , vol.316 , pp. 563-581
    • Benham, C.J.1    Savitt, A.G.2    Bauer, W.R.3
  • 4
    • 0033555906 scopus 로고    scopus 로고
    • Tandem Repeats Finder: A program to analyze DNA sequences
    • Benson, G. 1999. Tandem Repeats Finder: A program to analyze DNA sequences. Nucleic Acids Res. 27: 573-580.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 573-580
    • Benson, G.1
  • 6
    • 0035879005 scopus 로고    scopus 로고
    • An overview of the MAGE gene family with the identification of all human members of the family
    • Chomez, P., De Backer, O., Bertrand, M., De Plaen, E., Boon, T., and Lucas, S. 2001. An overview of the MAGE gene family with the identification of all human members of the family. Cancer Res. 61: 5544-5551.
    • (2001) Cancer Res. , vol.61 , pp. 5544-5551
    • Chomez, P.1    De Backer, O.2    Bertrand, M.3    De Plaen, E.4    Boon, T.5    Lucas, S.6
  • 7
    • 0031961742 scopus 로고    scopus 로고
    • Gene expression during mammalian meiosis
    • Eddy, E.M. and O'Brien, D.A. 1998. Gene expression during mammalian meiosis. Curr. Top. Dev. Biol. 37: 141-200.
    • (1998) Curr. Top. Dev. Biol. , vol.37 , pp. 141-200
    • Eddy, E.M.1    O'Brien, D.A.2
  • 8
    • 1642475221 scopus 로고    scopus 로고
    • Extensive gene traffic on the mammalian X chromosome
    • Emerson, J.J., Kaessmann, H., Betran, E., and Long, M. 2004. Extensive gene traffic on the mammalian X chromosome. Science 303: 537-540.
    • (2004) Science , vol.303 , pp. 537-540
    • Emerson, J.J.1    Kaessmann, H.2    Betran, E.3    Long, M.4
  • 9
    • 0037057517 scopus 로고    scopus 로고
    • The SSX gene family: Characterization of 9 complete genes
    • Gure, A.O., Wei, I.J., Old, L.J., and Chen, Y.T. 2002. The SSX gene family: Characterization of 9 complete genes. Int. J. Cancer 101: 448-453.
    • (2002) Int. J. Cancer , vol.101 , pp. 448-453
    • Gure, A.O.1    Wei, I.J.2    Old, L.J.3    Chen, Y.T.4
  • 10
    • 0034284437 scopus 로고    scopus 로고
    • Repbase update: A database and an electronic journal of repetitive elements
    • Jurka, J. 2000. Repbase update: A database and an electronic journal of repetitive elements. Trends Genet. 16: 418-420.
    • (2000) Trends Genet. , vol.16 , pp. 418-420
    • Jurka, J.1
  • 12
    • 2642558614 scopus 로고    scopus 로고
    • The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation
    • Khil, P.P., Smirnova, N.A., Romanienko, P.J., and Camerini-Otero, R.D. 2004. The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation. Nat. Genet. 36: 642-646.
    • (2004) Nat. Genet. , vol.36 , pp. 642-646
    • Khil, P.P.1    Smirnova, N.A.2    Romanienko, P.J.3    Camerini-Otero, R.D.4
  • 16
    • 0038420050 scopus 로고    scopus 로고
    • Evidence that the human X chromosome is enriched for male-specific but not female-specific genes
    • Lercher, M.J., Urrutia, A.O., and Hurst, L.D. 2003. Evidence that the human X chromosome is enriched for male-specific but not female-specific genes. Mol. Biol. Evol. 20: 1113-1116.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 1113-1116
    • Lercher, M.J.1    Urrutia, A.O.2    Hurst, L.D.3
  • 17
  • 19
    • 0036193087 scopus 로고    scopus 로고
    • Novel paralogy relations among human chromosomes support a link between the phylogeny of doublesex -related genes and the evolution of sex determination
    • Ottolenghi, C., Fellous, M., Barbieri, M., and McElreavey, K. 2002. Novel paralogy relations among human chromosomes support a link between the phylogeny of doublesex -related genes and the evolution of sex determination. Genomics 79: 333-343.
    • (2002) Genomics , vol.79 , pp. 333-343
    • Ottolenghi, C.1    Fellous, M.2    Barbieri, M.3    McElreavey, K.4
  • 20
    • 0029762817 scopus 로고    scopus 로고
    • Inverted repeats, stem-loops, and cruciforms: Significance for initiation of DNA replication
    • Pearson, C.E., Zorbas, H., Price, G.B., and Zannis-Hadjopoulos, M. 1996. Inverted repeats, stem-loops, and cruciforms: Significance for initiation of DNA replication. J. Cell Biochem. 63: 1-22.
    • (1996) J. Cell Biochem. , vol.63 , pp. 1-22
    • Pearson, C.E.1    Zorbas, H.2    Price, G.B.3    Zannis-Hadjopoulos, M.4
  • 22
    • 0036245495 scopus 로고    scopus 로고
    • Segmental duplications and the evolution of the primate genome
    • Samonte, R.V. and Eichler, E.E. 2002. Segmental duplications and the evolution of the primate genome. Nat. Rev. Genet. 3: 65-72.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 65-72
    • Samonte, R.V.1    Eichler, E.E.2
  • 23
    • 2942591945 scopus 로고    scopus 로고
    • The cancer/testis genes: Review, standardization, and commentary
    • Scanlan, M.J., Simpson, A.J.G., and Old, L.J. 2004. The cancer/testis genes: Review, standardization, and commentary. Cancer Imm. 4: 1-15.
    • (2004) Cancer Imm. , vol.4 , pp. 1-15
    • Scanlan, M.J.1    Simpson, A.J.G.2    Old, L.J.3
  • 24
    • 0034628902 scopus 로고    scopus 로고
    • A cruciform structural transition provides a molecular switch for chromosome structure and dynamics
    • Shlyakhtenko, L.S., Hsieh, P., Grigoriev, M., Potaman, V.N., Sinden, R.R., and Lyubchenko, Y.L. 2000. A cruciform structural transition provides a molecular switch for chromosome structure and dynamics. J. Mol. Biol. 296: 1169-1173.
    • (2000) J. Mol. Biol. , vol.296 , pp. 1169-1173
    • Shlyakhtenko, L.S.1    Hsieh, P.2    Grigoriev, M.3    Potaman, V.N.4    Sinden, R.R.5    Lyubchenko, Y.L.6
  • 26
    • 0031005848 scopus 로고    scopus 로고
    • Emerin deletion reveals a common X-chromosome inversion mediated by inverted repeats
    • Small, K., Iber, J., and Warren, S.T. 1997. Emerin deletion reveals a common X-chromosome inversion mediated by inverted repeats. Nat. Genet. 16: 96-99.
    • (1997) Nat. Genet. , vol.16 , pp. 96-99
    • Small, K.1    Iber, J.2    Warren, S.T.3
  • 28
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 29
    • 1342308231 scopus 로고    scopus 로고
    • X chromosomes, retrogenes and their role in male reproduction
    • Wang, P.J. 2004. X chromosomes, retrogenes and their role in male reproduction. Trends Endocrin. Metab. 15: 79-83.
    • (2004) Trends Endocrin. Metab. , vol.15 , pp. 79-83
    • Wang, P.J.1
  • 30
    • 0035071815 scopus 로고    scopus 로고
    • An abundance of X-linked genes expressed in spermatogonia
    • Wang, P.J., McCarrey, J.R., Yang, F., and Page, D.C. 2001. An abundance of X-linked genes expressed in spermatogonia. Nat. Genet. 27: 422-426.
    • (2001) Nat. Genet. , vol.27 , pp. 422-426
    • Wang, P.J.1    McCarrey, J.R.2    Yang, F.3    Page, D.C.4
  • 32
    • 0037073416 scopus 로고    scopus 로고
    • 'Two novel human X-linked homeobox genes, hPEPP1 and hPEPP2, selectively expressed in the testis
    • Wayne, C.M., MacLean, J.A., Cornwall, G., and Wilkinson, M.F. 2002. 'Two novel human X-linked homeobox genes, hPEPP1 and hPEPP2, selectively expressed in the testis. Gene 301: 1-11.
    • (2002) Gene , vol.301 , pp. 1-11
    • Wayne, C.M.1    MacLean, J.A.2    Cornwall, G.3    Wilkinson, M.F.4
  • 33
    • 0029656085 scopus 로고    scopus 로고
    • Molecular definition of breakpoints associated with human Xq isochromosomes: Implications for mechanisms of formation
    • Wolff, D.J., Miller, A.P., Van Dyke, D.L., Schwartz, S., and Willard, H.F. 1996. Molecular definition of breakpoints associated with human Xq isochromosomes: Implications for mechanisms of formation. Am. J. Hum. Genet. 58: 154-160.
    • (1996) Am. J. Hum. Genet. , vol.58 , pp. 154-160
    • Wolff, D.J.1    Miller, A.P.2    Van Dyke, D.L.3    Schwartz, S.4    Willard, H.F.5
  • 34
    • 0037407075 scopus 로고    scopus 로고
    • Sexual antagonism and X inactivation - The SAXI hypothesis
    • Wu, C.I. and Xu, E.Y. 2003. Sexual antagonism and X inactivation - The SAXI hypothesis. Trends Genet. 19: 243-247.
    • (2003) Trends Genet. , vol.19 , pp. 243-247
    • Wu, C.I.1    Xu, E.Y.2
  • 35
    • 0034597359 scopus 로고    scopus 로고
    • Isolation of a cDNA for a novel human RING finger protein gene, RNF18, by the virtual transcribed sequence (VTS) approach(1)
    • Yoshikawa, T., Seki, N., Azuma, T., Masuho, Y., Muramatsu, M., Miyajima, N., and Saito, T. 2000. Isolation of a cDNA for a novel human RING finger protein gene, RNF18, by the virtual transcribed sequence (VTS) approach(1). Biochim. Biophys. Acta 1493: 349-355.
    • (2000) Biochim. Biophys. Acta , vol.1493 , pp. 349-355
    • Yoshikawa, T.1    Seki, N.2    Azuma, T.3    Masuho, Y.4    Muramatsu, M.5    Miyajima, N.6    Saito, T.7
  • 37
    • 0037364292 scopus 로고    scopus 로고
    • Cancer/testis-associated genes: Identification, expression profile, and putative function
    • Zendman, A.J., Ruiter, D.J., and Van Muijen, G.N. 2003a. Cancer/testis-associated genes: Identification, expression profile, and putative function. J. Cell Physiol. 194: 272-288.
    • (2003) J. Cell Physiol. , vol.194 , pp. 272-288
    • Zendman, A.J.1    Ruiter, D.J.2    Van Muijen, G.N.3


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