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Volumn 33, Issue 19, 2013, Pages 3735-3748

The Yeast Snt2 Protein Coordinates the Transcriptional response to hydrogen peroxide-mediated oxidative stress

Author keywords

[No Author keywords available]

Indexed keywords

ACYLTRANSFERASE; HYDROGEN PEROXIDE; PROTEIN ECM5; PROTEIN RPD3; PROTEIN SNT2; RAPAMYCIN; SACCHAROMYCES CEREVISIAE PROTEIN; TARGET OF RAPAMYCIN KINASE; UNCLASSIFIED DRUG;

EID: 84886785776     PISSN: 02707306     EISSN: 10985549     Source Type: Journal    
DOI: 10.1128/MCB.00025-13     Document Type: Article
Times cited : (38)

References (65)
  • 3
    • 84859586432 scopus 로고    scopus 로고
    • The response to heat shock and oxidative stress in Saccharomyces cerevisiae
    • Morano KA, Grant CM, Moye-Rowley WS. 2012. The response to heat shock and oxidative stress in Saccharomyces cerevisiae. Genetics 190: 1157-1195.
    • (2012) Genetics , vol.190 , pp. 1157-1195
    • Morano, K.A.1    Grant, C.M.2    Moye-Rowley, W.S.3
  • 4
    • 81355139585 scopus 로고    scopus 로고
    • Controlling gene expression in response to stress
    • de Nadal E, Ammerer G, Posas F. 2011. Controlling gene expression in response to stress. Nat. Rev. Genet. 12:833-845.
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 833-845
    • de Nadal, E.1    Ammerer, G.2    Posas, F.3
  • 5
    • 0033813390 scopus 로고    scopus 로고
    • Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast
    • Estruch F. 2000. Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast. FEMS Microbiol. Rev. 24: 469-486.
    • (2000) FEMS Microbiol. Rev. , vol.24 , pp. 469-486
    • Estruch, F.1
  • 13
    • 1642580754 scopus 로고    scopus 로고
    • The MAPK Hog1 recruits Rpd3 histone deacetylase to activate osmoresponsive genes
    • De Nadal E, Zapater M, Alepuz PM, Sumoy L, Mas G, Posas F. 2004. The MAPK Hog1 recruits Rpd3 histone deacetylase to activate osmoresponsive genes. Nature 427:370-374.
    • (2004) Nature , vol.427 , pp. 370-374
    • De Nadal, E.1    Zapater, M.2    Alepuz, P.M.3    Sumoy, L.4    Mas, G.5    Posas, F.6
  • 14
    • 70450277187 scopus 로고    scopus 로고
    • SAGA and Rpd3 chromatin modification complexes dynamically regulate heat shock gene structure and expression
    • Kremer SB, Gross DS. 2009. SAGA and Rpd3 chromatin modification complexes dynamically regulate heat shock gene structure and expression. J. Biol. Chem. 284:32914-32931.
    • (2009) J. Biol. Chem. , vol.284 , pp. 32914-32931
    • Kremer, S.B.1    Gross, D.S.2
  • 15
    • 33947260700 scopus 로고    scopus 로고
    • Direct role for the Rpd3 complex in transcriptional induction of the anaerobic DAN/ TIR genes in yeast
    • Sertil O, Vemula A, Salmon SL, Morse RH, Lowry CV. 2007. Direct role for the Rpd3 complex in transcriptional induction of the anaerobic DAN/ TIR genes in yeast. Mol. Cell. Biol. 27:2037-2047.
    • (2007) Mol. Cell. Biol. , vol.27 , pp. 2037-2047
    • Sertil, O.1    Vemula, A.2    Salmon, S.L.3    Morse, R.H.4    Lowry, C.V.5
  • 16
    • 77952119807 scopus 로고    scopus 로고
    • The Rpd3L HDAC complex is essential for the heat stress response in yeast
    • Ruiz-Roig C, Vieitez C, Posas F, de Nadal E. 2010. The Rpd3L HDAC complex is essential for the heat stress response in yeast. Mol. Microbiol. 76:1049-1062.
    • (2010) Mol. Microbiol. , vol.76 , pp. 1049-1062
    • Ruiz-Roig, C.1    Vieitez, C.2    Posas, F.3    de Nadal, E.4
  • 18
    • 0142216123 scopus 로고    scopus 로고
    • Ask10p mediates the oxidative stress-induced destruction of the Saccharomyces cerevisiae Ctype cyclin Ume3p/Srb11p
    • Cohen TJ, Lee K, Rutkowski LH, Strich R. 2003. Ask10p mediates the oxidative stress-induced destruction of the Saccharomyces cerevisiae Ctype cyclin Ume3p/Srb11p. Eukaryot. Cell 2:962-970.
    • (2003) Eukaryot. Cell , vol.2 , pp. 962-970
    • Cohen, T.J.1    Lee, K.2    Rutkowski, L.H.3    Strich, R.4
  • 19
    • 0029872224 scopus 로고    scopus 로고
    • Identification of ASK10 as a multicopy activator of Skn7p-dependent transcription of a HIS3 reporter gene
    • Page N, Sheraton J, Brown JL, Stewart RC, Bussey H. 1996. Identification of ASK10 as a multicopy activator of Skn7p-dependent transcription of a HIS3 reporter gene. Yeast 12:267-272.
    • (1996) Yeast , vol.12 , pp. 267-272
    • Page, N.1    Sheraton, J.2    Brown, J.L.3    Stewart, R.C.4    Bussey, H.5
  • 21
    • 16844368767 scopus 로고    scopus 로고
    • Pkc1 and the upstream elements of the cell integrity pathway in Saccharomyces cerevisiae, Rom2 and Mtl1, are required for cellular responses to oxidative stress
    • Vilella F, Herrero E, Torres J, de la Torre-Ruiz MA. 2005. Pkc1 and the upstream elements of the cell integrity pathway in Saccharomyces cerevisiae, Rom2 and Mtl1, are required for cellular responses to oxidative stress. J. Biol. Chem. 280:9149-9159.
    • (2005) J. Biol. Chem. , vol.280 , pp. 9149-9159
    • Vilella, F.1    Herrero, E.2    Torres, J.3    de la Torre-Ruiz, M.A.4
  • 23
    • 0031820288 scopus 로고    scopus 로고
    • Additional modules for ver-satile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
    • Longtine MS, McKenzie A, III, Demarini DJ, Shah NG, Wach A, Brachat A, Philippsen P, Pringle JR. 1998. Additional modules for ver-satile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14:953-961.
    • (1998) Yeast , vol.14 , pp. 953-961
    • Longtine, M.S.1    McKenzie, A.2    Demarini, D.J.3    Shah, N.G.4    Wach, A.5    Brachat, A.6    Philippsen, P.7    Pringle, J.R.8
  • 24
    • 0028819762 scopus 로고
    • Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p
    • Aitchison JD, Rout MP, Marelli M, Blobel G, Wozniak RW. 1995. Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152p. J. Cell Biol. 131:1133-1148.
    • (1995) J. Cell Biol. , vol.131 , pp. 1133-1148
    • Aitchison, J.D.1    Rout, M.P.2    Marelli, M.3    Blobel, G.4    Wozniak, R.W.5
  • 25
    • 33749669082 scopus 로고    scopus 로고
    • Histone H2B deacetylation at lysine 11 is required for yeast apoptosis induced by phosphorylation of H2B at serine 10
    • Ahn SH, Diaz RL, Grunstein M, Allis CD. 2006. Histone H2B deacetylation at lysine 11 is required for yeast apoptosis induced by phosphorylation of H2B at serine 10. Mol. Cell 24:211-220.
    • (2006) Mol. Cell , vol.24 , pp. 211-220
    • Ahn, S.H.1    Diaz, R.L.2    Grunstein, M.3    Allis, C.D.4
  • 27
    • 79957556740 scopus 로고    scopus 로고
    • Conjugation of magnetic beads for immunopurification of protein complexes
    • pdb.prot5610. doi:10.1101/pdb.prot5610
    • Cristea IM, Chait BT. 2011. Conjugation of magnetic beads for immunopurification of protein complexes. Cold Spring Harb. Protoc. 2011: pdb.prot5610. doi:10.1101/pdb.prot5610.
    • (2011) Cold Spring Harb. Protoc. , vol.2011
    • Cristea, I.M.1    Chait, B.T.2
  • 28
    • 79957574414 scopus 로고    scopus 로고
    • Affinity purification of protein complexes
    • pdb.prot5611. doi:10.1101/pdb.prot5611
    • Cristea IM, Chait BT. 2011. Affinity purification of protein complexes. Cold Spring Harb. Protoc. 2011:pdb.prot5611. doi:10.1101/pdb.prot5611.
    • (2011) Cold Spring Harb. Protoc. , vol.2011
    • Cristea, I.M.1    Chait, B.T.2
  • 29
    • 3142702204 scopus 로고    scopus 로고
    • TANDEM: matching proteins with tandem mass spectra
    • Craig R, Beavis RC. 2004. TANDEM: matching proteins with tandem mass spectra. Bioinformatics 20:1466-1467.
    • (2004) Bioinformatics , vol.20 , pp. 1466-1467
    • Craig, R.1    Beavis, R.C.2
  • 32
    • 39749128389 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo
    • Unit 21.3. doi:10.1002/0471142727.mb2103s69
    • Aparicio O, Geisberg JV, Sekinger E, Yang A, Moqtaderi Z, Struhl K. 2005. Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo. Curr. Protoc. Mol. Biol. Chapter 17:Unit 21.3. doi:10.1002/0471142727.mb2103s69.
    • (2005) Curr. Protoc. Mol. Biol. Chapter 17
    • Aparicio, O.1    Geisberg, J.V.2    Sekinger, E.3    Yang, A.4    Moqtaderi, Z.5    Struhl, K.6
  • 34
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • doi:10.1186/gb-2009-10-3-r25
    • Langmead B, Trapnell C, Pop M, Salzberg SL. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10:R25. doi:10.1186/gb-2009-10-3-r25.
    • (2009) Genome Biol. , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 36
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • doi:10.1186/gb -2010-11-8-r86
    • Goecks J, Nekrutenko A, Taylor J. 2010. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11:R86. doi:10.1186/gb -2010-11-8-r86.
    • (2010) Genome Biol. , vol.11
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 39
    • 77951770756 scopus 로고    scopus 로고
    • BEDTools: a flexible suite of utilities for comparing genomic features
    • Quinlan AR, Hall IM. 2010. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26:841-842.
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 43
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL. 2009. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25:1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 46
    • 80052217019 scopus 로고    scopus 로고
    • Life span extension and H(2)O(2) resistance elicited by caloric restriction require the peroxiredoxin Tsa1 in Saccharomyces cerevisiae
    • Molin M, Yang J, Hanzen S, Toledano MB, Labarre J, Nystrom T. 2011. Life span extension and H(2)O(2) resistance elicited by caloric restriction require the peroxiredoxin Tsa1 in Saccharomyces cerevisiae. Mol. Cell 43:823-833.
    • (2011) Mol. Cell , vol.43 , pp. 823-833
    • Molin, M.1    Yang, J.2    Hanzen, S.3    Toledano, M.B.4    Labarre, J.5    Nystrom, T.6
  • 47
    • 0026560388 scopus 로고
    • The PAR1 (YAP1/SNQ3) gene of Saccharomyces cerevisiae, a c-jun homologue, is involved in oxygen metabolism
    • Schnell N, Krems B, Entian KD. 1992. The PAR1 (YAP1/SNQ3) gene of Saccharomyces cerevisiae, a c-jun homologue, is involved in oxygen metabolism. Curr. Genet. 21:269-273.
    • (1992) Curr. Genet. , vol.21 , pp. 269-273
    • Schnell, N.1    Krems, B.2    Entian, K.D.3
  • 48
    • 64549091902 scopus 로고    scopus 로고
    • Where does mediator bind in vivo
    • doi:10.1371/journal.pone.0005029
    • Fan X, Struhl K. 2009. Where does mediator bind in vivo? PLoS One 4:e5029. doi:10.1371/journal.pone.0005029.
    • (2009) PLoS One , vol.4
    • Fan, X.1    Struhl, K.2
  • 50
    • 0036886570 scopus 로고    scopus 로고
    • The yeast zinc finger regulators Pdr1p and Pdr3p control pleiotropic drug resistance (PDR) as homo- and heterodimers in vivo
    • Mamnun YM, Pandjaitan R, Mahe Y, Delahodde A, Kuchler K. 2002. The yeast zinc finger regulators Pdr1p and Pdr3p control pleiotropic drug resistance (PDR) as homo- and heterodimers in vivo. Mol. Microbiol. 46:1429-1440.
    • (2002) Mol. Microbiol. , vol.46 , pp. 1429-1440
    • Mamnun, Y.M.1    Pandjaitan, R.2    Mahe, Y.3    Delahodde, A.4    Kuchler, K.5
  • 51
    • 0032570577 scopus 로고    scopus 로고
    • Cytochrome c in the apoptotic and antioxidant cascades
    • Skulachev VP. 1998. Cytochrome c in the apoptotic and antioxidant cascades. FEBS Lett. 423:275-280.
    • (1998) FEBS Lett. , vol.423 , pp. 275-280
    • Skulachev, V.P.1
  • 52
    • 0030942294 scopus 로고    scopus 로고
    • Regulation of yAP-1 nuclear localization in response to oxidative stress
    • Kuge S, Jones N, Nomoto A. 1997. Regulation of yAP-1 nuclear localization in response to oxidative stress. EMBO J. 16:1710-1720.
    • (1997) EMBO J. , vol.16 , pp. 1710-1720
    • Kuge, S.1    Jones, N.2    Nomoto, A.3
  • 53
    • 11144310058 scopus 로고    scopus 로고
    • YAP4 gene expression is induced in response to several forms of stress in Saccharomyces cerevisiae
    • Nevitt T, Pereira J, Rodrigues-Pousada C. 2004. YAP4 gene expression is induced in response to several forms of stress in Saccharomyces cerevisiae. Yeast 21:1365-1374.
    • (2004) Yeast , vol.21 , pp. 1365-1374
    • Nevitt, T.1    Pereira, J.2    Rodrigues-Pousada, C.3
  • 55
    • 0032896994 scopus 로고    scopus 로고
    • Stress induction of HSP30, the plasma membrane heat shock protein gene of Saccharomyces cerevisiae, appears not to use known stress-regulated transcription factors
    • Seymour IJ, Piper PW. 1999. Stress induction of HSP30, the plasma membrane heat shock protein gene of Saccharomyces cerevisiae, appears not to use known stress-regulated transcription factors. Microbiology 145: 231-239.
    • (1999) Microbiology , vol.145 , pp. 231-239
    • Seymour, I.J.1    Piper, P.W.2
  • 56
    • 0033916138 scopus 로고    scopus 로고
    • The Skn7 response regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is required for the induction of heat shock genes by oxidative stress
    • Raitt DC, Johnson AL, Erkine AM, Makino K, Morgan B, Gross DS, Johnston LH. 2000. The Skn7 response regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is required for the induction of heat shock genes by oxidative stress. Mol. Biol. Cell 11:2335-2347.
    • (2000) Mol. Biol. Cell , vol.11 , pp. 2335-2347
    • Raitt, D.C.1    Johnson, A.L.2    Erkine, A.M.3    Makino, K.4    Morgan, B.5    Gross, D.S.6    Johnston, L.H.7
  • 57
    • 77958102243 scopus 로고    scopus 로고
    • The homeodomain transcription factor Ste12: connecting fungal MAPK signalling to plant pathogenicity
    • Rispail N, Di Pietro A. 2010. The homeodomain transcription factor Ste12: connecting fungal MAPK signalling to plant pathogenicity. Commun. Integr. Biol. 3:327-332.
    • (2010) Commun. Integr. Biol. , vol.3 , pp. 327-332
    • Rispail, N.1    Di Pietro, A.2
  • 58
    • 0033981095 scopus 로고    scopus 로고
    • RAP, RAP, open up! New wrinkles for RAP1 in yeast
    • Morse RH. 2000. RAP, RAP, open up! New wrinkles for RAP1 in yeast. Trends Genet. 16:51-53.
    • (2000) Trends Genet. , vol.16 , pp. 51-53
    • Morse, R.H.1
  • 59
    • 0034934774 scopus 로고    scopus 로고
    • Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association
    • Lieb JD, Liu X, Botstein D, Brown PO. 2001. Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association. Nat. Genet. 28:327-334.
    • (2001) Nat. Genet. , vol.28 , pp. 327-334
    • Lieb, J.D.1    Liu, X.2    Botstein, D.3    Brown, P.O.4
  • 60
    • 0036899644 scopus 로고    scopus 로고
    • Elucidating TOR signaling and rapamycin action: lessons from Saccharomyces cerevisiae
    • Crespo JL, Hall MN. 2002. Elucidating TOR signaling and rapamycin action: lessons from Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 66:579-591.
    • (2002) Microbiol. Mol. Biol. Rev. , vol.66 , pp. 579-591
    • Crespo, J.L.1    Hall, M.N.2
  • 61
    • 62849096399 scopus 로고    scopus 로고
    • The H3K4 demethylase lid associates with and inhibits histone deacetylase Rpd3
    • Lee N, Erdjument-Bromage H, Tempst P, Jones RS, Zhang Y. 2009. The H3K4 demethylase lid associates with and inhibits histone deacetylase Rpd3. Mol. Cell. Biol. 29:1401-1410.
    • (2009) Mol. Cell. Biol. , vol.29 , pp. 1401-1410
    • Lee, N.1    Erdjument-Bromage, H.2    Tempst, P.3    Jones, R.S.4    Zhang, Y.5
  • 62
    • 35648957173 scopus 로고    scopus 로고
    • Heme levels switch the function of HapI of Saccharomyces cerevisiae between transcriptional activator and transcriptional repressor
    • Hickman MJ, Winston F. 2007. Heme levels switch the function of HapI of Saccharomyces cerevisiae between transcriptional activator and transcriptional repressor. Mol. Cell. Biol. 27:7414-7424.
    • (2007) Mol. Cell. Biol. , vol.27 , pp. 7414-7424
    • Hickman, M.J.1    Winston, F.2
  • 64
    • 84860516339 scopus 로고    scopus 로고
    • Novel E3 ubiquitin ligases that regulate histone protein levels in the budding yeast Saccharomyces cerevisiae
    • doi:10.1371/journal.pone.0036295
    • Singh RK, Gonzalez M, Kabbaj MH, Gunjan A. 2012. Novel E3 ubiquitin ligases that regulate histone protein levels in the budding yeast Saccharomyces cerevisiae. PLoS One 7:e36295. doi:10.1371/journal.pone.0036295.
    • (2012) PLoS One , vol.7
    • Singh, R.K.1    Gonzalez, M.2    Kabbaj, M.H.3    Gunjan, A.4
  • 65
    • 84876305060 scopus 로고    scopus 로고
    • A novel single-cell screening platform reveals proteome plasticity during yeast stress responses
    • Breker M, Gymrek M, Schuldiner M. 2013. A novel single-cell screening platform reveals proteome plasticity during yeast stress responses. J. Cell Biol. 200:839-850.
    • (2013) J. Cell Biol. , vol.200 , pp. 839-850
    • Breker, M.1    Gymrek, M.2    Schuldiner, M.3


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