-
1
-
-
0035107224
-
Regulatory mechanisms controlling expression of the DAN/TlR mannoprotein genes during anaerobic remodeling of the cell wall in Saccharomyces cerevisiae
-
Abramova, N. E., B. D. Cohen, O. Sertil, R. Kapoor, K. J. Davies, and C. V. Lowry. 2001. Regulatory mechanisms controlling expression of the DAN/TlR mannoprotein genes during anaerobic remodeling of the cell wall in Saccharomyces cerevisiae. Genetics 157:1169-1177.
-
(2001)
Genetics
, vol.157
, pp. 1169-1177
-
-
Abramova, N.E.1
Cohen, B.D.2
Sertil, O.3
Kapoor, R.4
Davies, K.J.5
Lowry, C.V.6
-
2
-
-
39749128389
-
-
Aparicio, O., J. V. Geisberg, E. Sekinger, A. Yang, Z. Moqtaderi, and K. Struhl. 2005. Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo, p. 21.3.1-21.3.33. In F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (ed.), Current protocols in molecular biology, lohn Wiley & Sons, Inc., Hoboken, NJ.
-
Aparicio, O., J. V. Geisberg, E. Sekinger, A. Yang, Z. Moqtaderi, and K. Struhl. 2005. Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo, p. 21.3.1-21.3.33. In F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (ed.), Current protocols in molecular biology, lohn Wiley & Sons, Inc., Hoboken, NJ.
-
-
-
-
3
-
-
0034957480
-
Nuclear hormone receptors and gene expression
-
Aranda, A., and A. Pascual. 2001. Nuclear hormone receptors and gene expression. Physiol. Rev. 81:1269-1304.
-
(2001)
Physiol. Rev
, vol.81
, pp. 1269-1304
-
-
Aranda, A.1
Pascual, A.2
-
4
-
-
0004270170
-
-
Greene Publishing Associates and Wiley-Interscience, New York, NY
-
Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. E. Struhl. 1991. Current protocols in molecular biology. Greene Publishing Associates and Wiley-Interscience, New York, NY.
-
(1991)
Current protocols in molecular biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.E.7
-
5
-
-
0036271384
-
The yeast transcriptome in aerobic and hypoxic conditions: Effects of hap1, rox1, rox3 and srb10 deletions
-
Becerra, M., L. J. Lombardia-Ferreira, N. C. Hauser, J. D. Hoheisel, B. Tizon, and M. E. Cerdan. 2002. The yeast transcriptome in aerobic and hypoxic conditions: effects of hap1, rox1, rox3 and srb10 deletions. Mol. Microbiol. 43:545-555.
-
(2002)
Mol. Microbiol
, vol.43
, pp. 545-555
-
-
Becerra, M.1
Lombardia-Ferreira, L.J.2
Hauser, N.C.3
Hoheisel, J.D.4
Tizon, B.5
Cerdan, M.E.6
-
6
-
-
0032579440
-
Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR-mediated gene disruption and other applications
-
Brachmann, C. B., A. Davies, G. J. Cost, E. Caputo, J. Li, P. Hieter, and J. D. Boeke. 1998. Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14:115-132.
-
(1998)
Yeast
, vol.14
, pp. 115-132
-
-
Brachmann, C.B.1
Davies, A.2
Cost, G.J.3
Caputo, E.4
Li, J.5
Hieter, P.6
Boeke, J.D.7
-
7
-
-
9144256665
-
-
Christie, K. R., S. Weng, R. Balakrishnan, M. C. Costanzo, K. Dolinski, S. S. Dwight, S. R. Engel, B. Feierbach, D. G. Fisk, J. E. Hirschman, E. L. Hong, L. Issel-Tarver, R. Nash, A. Sethuraman, B. Starr, C. L. Theesfeld, R. Andrada, G. Binkley, Q. Dong, C. Lane, M. Schroeder, D. Botstein, and J. M. Cherry. 2004. Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms. Nucleic Acids Res. 32:D311-D314.
-
Christie, K. R., S. Weng, R. Balakrishnan, M. C. Costanzo, K. Dolinski, S. S. Dwight, S. R. Engel, B. Feierbach, D. G. Fisk, J. E. Hirschman, E. L. Hong, L. Issel-Tarver, R. Nash, A. Sethuraman, B. Starr, C. L. Theesfeld, R. Andrada, G. Binkley, Q. Dong, C. Lane, M. Schroeder, D. Botstein, and J. M. Cherry. 2004. Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms. Nucleic Acids Res. 32:D311-D314.
-
-
-
-
8
-
-
32544446330
-
Recruitment of Tup1p and Cti6p regulates heme-deficient expression of Aft1p target genes
-
Crisp, R. J., E. M. Adkins, E. Kimmel, and J. Kaplan. 2006. Recruitment of Tup1p and Cti6p regulates heme-deficient expression of Aft1p target genes. EMBO J. 25:512-521.
-
(2006)
EMBO J
, vol.25
, pp. 512-521
-
-
Crisp, R.J.1
Adkins, E.M.2
Kimmel, E.3
Kaplan, J.4
-
9
-
-
33748888161
-
A role for sterol levels in oxygen sensing in Saccharomyces cerevisiae
-
Davies, B. S., and J. Rine. 2006. A role for sterol levels in oxygen sensing in Saccharomyces cerevisiae. Genetics 174:191-201.
-
(2006)
Genetics
, vol.174
, pp. 191-201
-
-
Davies, B.S.1
Rine, J.2
-
10
-
-
23344435534
-
Dual activators of the sterol biosynthetic pathway of Saccharomyces cerevisiae: Similar activation/regulatory domains but different response mechanisms
-
Davies, B. S., H. S. Wang, and J. Rine. 2005. Dual activators of the sterol biosynthetic pathway of Saccharomyces cerevisiae: similar activation/regulatory domains but different response mechanisms. Mol. Cell. Biol. 25:7375-7385.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 7375-7385
-
-
Davies, B.S.1
Wang, H.S.2
Rine, J.3
-
11
-
-
0028898763
-
Multiple elements and auto-repression regulate Rox1, a repressor of hypoxic genes in Saccharomyces cerevisiae
-
Deckert, J., R. Perini, B. Balasubramanian, and R. S. Zitomer. 1995. Multiple elements and auto-repression regulate Rox1, a repressor of hypoxic genes in Saccharomyces cerevisiae. Genetics 139:1149-1158.
-
(1995)
Genetics
, vol.139
, pp. 1149-1158
-
-
Deckert, J.1
Perini, R.2
Balasubramanian, B.3
Zitomer, R.S.4
-
12
-
-
0028195088
-
Functional analysis of the zinc cluster domain of the CYP1 (HAP1) complex regulator in heme-sufficient and heme-deficient yeast cells
-
Defranoux, N., M. Gaisne, and J. Verdiere. 1994. Functional analysis of the zinc cluster domain of the CYP1 (HAP1) complex regulator in heme-sufficient and heme-deficient yeast cells. Mol. Gen. Genet. 242:699-707.
-
(1994)
Mol. Gen. Genet
, vol.242
, pp. 699-707
-
-
Defranoux, N.1
Gaisne, M.2
Verdiere, J.3
-
13
-
-
0029930384
-
Regulation by low temperatures and anaerobiosis of a yeast gene specifying a putative GPI-anchored plasma membrane protein
-
Donzeau, M., J. P. Bourdineaud, and G. J. Lauquin. 1996. Regulation by low temperatures and anaerobiosis of a yeast gene specifying a putative GPI-anchored plasma membrane protein. Mol. Microbiol. 20:449-459.
-
(1996)
Mol. Microbiol
, vol.20
, pp. 449-459
-
-
Donzeau, M.1
Bourdineaud, J.P.2
Lauquin, G.J.3
-
14
-
-
0025313940
-
Expression of the gene encoding subunit II of yeast QH2: Cytochrome c oxidoreductase is regulated by multiple factors
-
Dorsman, J. C., and L. A. Grivell. 1990. Expression of the gene encoding subunit II of yeast QH2: cytochrome c oxidoreductase is regulated by multiple factors. Curr. Genet. 17:459-464.
-
(1990)
Curr. Genet
, vol.17
, pp. 459-464
-
-
Dorsman, J.C.1
Grivell, L.A.2
-
15
-
-
0032710459
-
The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo
-
Dudley, A. M., C. Rougeulle, and F. Winston. 1999. The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo. Genes Dev. 13:2940-2945.
-
(1999)
Genes Dev
, vol.13
, pp. 2940-2945
-
-
Dudley, A.M.1
Rougeulle, C.2
Winston, F.3
-
16
-
-
10044271037
-
SREBP transcription factors: Master regulators of lipid homeostasis
-
Eberlé, D., B. Hegarty, P. Bossard, P. Ferré, and F. Foufelle. 2004. SREBP transcription factors: master regulators of lipid homeostasis. Biochimie 86: 839-848.
-
(2004)
Biochimie
, vol.86
, pp. 839-848
-
-
Eberlé, D.1
Hegarty, B.2
Bossard, P.3
Ferré, P.4
Foufelle, F.5
-
17
-
-
0027400951
-
Evidence for an interaction between the CYP1(HAP1) activator and a cellular factor during heme-dependent transcriptional regulation in the yeast Saccharomyces cerevisiae
-
Fytlovich, S., M. Gervais, C. Agrimonti, and B. Guiard. 1993. Evidence for an interaction between the CYP1(HAP1) activator and a cellular factor during heme-dependent transcriptional regulation in the yeast Saccharomyces cerevisiae. EMBO J. 12:1209-1218.
-
(1993)
EMBO J
, vol.12
, pp. 1209-1218
-
-
Fytlovich, S.1
Gervais, M.2
Agrimonti, C.3
Guiard, B.4
-
18
-
-
0344117668
-
A 'natural' mutation in Saccharomyces cerevisiae strains derived from S288c affects the complex regulatory gene HAP1 (CYP1)
-
Gaisne, M., A. M. Becam, J. Verdiere, and C. J. Herbert. 1999. A 'natural' mutation in Saccharomyces cerevisiae strains derived from S288c affects the complex regulatory gene HAP1 (CYP1). Curr. Genet. 36:195-200.
-
(1999)
Curr. Genet
, vol.36
, pp. 195-200
-
-
Gaisne, M.1
Becam, A.M.2
Verdiere, J.3
Herbert, C.J.4
-
19
-
-
0021278372
-
Distinctly regulated tandem upstream activation sites mediate catabolite repression of the CYC1 gene of S. cerevisiae
-
Guarente, L., B. Lalonde, P. Gifford, and E. Alani. 1984. Distinctly regulated tandem upstream activation sites mediate catabolite repression of the CYC1 gene of S. cerevisiae. Cell 36:503-511.
-
(1984)
Cell
, vol.36
, pp. 503-511
-
-
Guarente, L.1
Lalonde, B.2
Gifford, P.3
Alani, E.4
-
20
-
-
0020739930
-
Heme regulates transcription of the CYC1 gene of S. cerevisiae via an upstream activation site
-
Guarente, L., and T. Mason. 1983. Heme regulates transcription of the CYC1 gene of S. cerevisiae via an upstream activation site. Cell 32:1279-1286.
-
(1983)
Cell
, vol.32
, pp. 1279-1286
-
-
Guarente, L.1
Mason, T.2
-
21
-
-
0029872691
-
Mutations in target DNA elements of yeast HAP1 modulate its transcriptional activity without affecting DNA binding
-
Ha, N., K. Hellauer, and B. Turcotte. 1996. Mutations in target DNA elements of yeast HAP1 modulate its transcriptional activity without affecting DNA binding. Nucleic Acids Res. 24:1453-1459.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 1453-1459
-
-
Ha, N.1
Hellauer, K.2
Turcotte, B.3
-
22
-
-
4544352942
-
Transcriptional regulatory code of a eukaryotic genome
-
Harbison, C. T., D. B. Gordon, T. I. Lee, N. J. Rinaldi, K. D. Macisaac, T. W. Danford, N. M. Hannett, J. B. Tagne, D. B. Reynolds, J. Yoo, E. G. Jennings, J. Zeitlinger, D. K. Pokholok, M. Kellis, P. A. Rolfe, K. T. Takusagawa, E. S. Lander, D. K. Gifford, E. Fraenkel, and R. A. Young. 2004. Transcriptional regulatory code of a eukaryotic genome. Nature 431:99-104.
-
(2004)
Nature
, vol.431
, pp. 99-104
-
-
Harbison, C.T.1
Gordon, D.B.2
Lee, T.I.3
Rinaldi, N.J.4
Macisaac, K.D.5
Danford, T.W.6
Hannett, N.M.7
Tagne, J.B.8
Reynolds, D.B.9
Yoo, J.10
Jennings, E.G.11
Zeitlinger, J.12
Pokholok, D.K.13
Kellis, M.14
Rolfe, P.A.15
Takusagawa, K.T.16
Lander, E.S.17
Gifford, D.K.18
Fraenkel, E.19
Young, R.A.20
more..
-
23
-
-
0348010307
-
A mechanism of oxygen sensing in yeast. Multiple oxygen-responsive steps in the heme biosynthetic pathway affect Hap1 activity
-
Hon, T., A. Dodd, R. Dirmeier, N. Gorman, P. R. Sinclair, L. Zhang, and R. O. Poyton. 2003. A mechanism of oxygen sensing in yeast. Multiple oxygen-responsive steps in the heme biosynthetic pathway affect Hap1 activity. J. Biol. Chem. 278:50771-50780.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 50771-50780
-
-
Hon, T.1
Dodd, A.2
Dirmeier, R.3
Gorman, N.4
Sinclair, P.R.5
Zhang, L.6
Poyton, R.O.7
-
24
-
-
0035163058
-
The Hsp70-Ydj1 molecular chaperone represses the activity of the heme activator protein Hap1 in the absence of heme
-
Hon, T., H. C. Lee, A. Hach, J. L. Johnson, E. A. Craig, H. Erdjument-Bromage, P. Temper, and L. Zhang. 2001. The Hsp70-Ydj1 molecular chaperone represses the activity of the heme activator protein Hap1 in the absence of heme. Mol. Cell. Biol. 21:7923-7932.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 7923-7932
-
-
Hon, T.1
Lee, H.C.2
Hach, A.3
Johnson, J.L.4
Craig, E.A.5
Erdjument-Bromage, H.6
Temper, P.7
Zhang, L.8
-
25
-
-
17444422796
-
The heme activator protein Hap1 represses transcription by a heme-independent mechanism in Saccharomyces cerevisiae
-
Hon, T., H. C. Lee, Z. Hu, V. R. Iyer, and L. Zhang. 2005. The heme activator protein Hap1 represses transcription by a heme-independent mechanism in Saccharomyces cerevisiae. Genetics 169:1343-1352.
-
(2005)
Genetics
, vol.169
, pp. 1343-1352
-
-
Hon, T.1
Lee, H.C.2
Hu, Z.3
Iyer, V.R.4
Zhang, L.5
-
26
-
-
0032439653
-
Oxidative stress responses of the yeast Saccharomyces cerevisiae
-
Jamieson, D. J. 1998. Oxidative stress responses of the yeast Saccharomyces cerevisiae. Yeast 14:1511-1527.
-
(1998)
Yeast
, vol.14
, pp. 1511-1527
-
-
Jamieson, D.J.1
-
27
-
-
22244440847
-
Proline hydroxylation and gene expression
-
Kaelin, W. G. 2005. Proline hydroxylation and gene expression. Annu. Rev. Biochem. 74:115-128.
-
(2005)
Annu. Rev. Biochem
, vol.74
, pp. 115-128
-
-
Kaelin, W.G.1
-
28
-
-
0026635664
-
HAP1 and ROX1 form a regulatory pathway in the repression of HEM13 transcription in Saccharomyces cerevisiae
-
Keng, T. 1992. HAP1 and ROX1 form a regulatory pathway in the repression of HEM13 transcription in Saccharomyces cerevisiae. Mol. Cell. Biol. 12: 2616-2623.
-
(1992)
Mol. Cell. Biol
, vol.12
, pp. 2616-2623
-
-
Keng, T.1
-
29
-
-
0033553144
-
Transcriptional regulation of the squalene synthase gene (ERG9) in the yeast Saccharomyces cerevisiae
-
Kennedy, M. A., R. Barbuch, and M. Bard. 1999. Transcriptional regulation of the squalene synthase gene (ERG9) in the yeast Saccharomyces cerevisiae. Biochim. Biophys. Acta 1445:110-122.
-
(1999)
Biochim. Biophys. Acta
, vol.1445
, pp. 110-122
-
-
Kennedy, M.A.1
Barbuch, R.2
Bard, M.3
-
30
-
-
0032947358
-
Structure of HAP1-18-DNA implicates direct allosteric effect of protein-DNA interactions on transcriptional activation
-
King, D. A., L. Zhang, L. Guarente, and R. Marmorstein. 1999. Structure of HAP1-18-DNA implicates direct allosteric effect of protein-DNA interactions on transcriptional activation. Nat. Struct. Biol. 6:22-27.
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 22-27
-
-
King, D.A.1
Zhang, L.2
Guarente, L.3
Marmorstein, R.4
-
31
-
-
0032052761
-
Oxygen sensing and the transcriptional regulation of oxygen-responsive genes in yeast
-
Kwast, K. E., P. V. Burke, and R. O. Poyton. 1998. Oxygen sensing and the transcriptional regulation of oxygen-responsive genes in yeast. J. Exp. Biol. 201:1177-1195.
-
(1998)
J. Exp. Biol
, vol.201
, pp. 1177-1195
-
-
Kwast, K.E.1
Burke, P.V.2
Poyton, R.O.3
-
32
-
-
0036135461
-
Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: Functional roles of Rox1 and other factors in mediating the anoxic response
-
Kwast, K. E., L. C. Lai, N. Menda, D. T. James III, S. Aref, and P. V. Burke. 2002. Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: functional roles of Rox1 and other factors in mediating the anoxic response. J. Bacteriol. 184:250-265.
-
(2002)
J. Bacteriol
, vol.184
, pp. 250-265
-
-
Kwast, K.E.1
Lai, L.C.2
Menda, N.3
James III, D.T.4
Aref, S.5
Burke, P.V.6
-
33
-
-
18144415477
-
Dynamical remodeling of the transcriptome during short-term anaerobiosis in Saccharomyces cerevisiae: Differential response and role of Msn2 and/or Msn4 and other factors in galactose and glucose media
-
Lai, L. C., A. L. Kosorukoff, P. V. Burke, and K. E. Kwast. 2005. Dynamical remodeling of the transcriptome during short-term anaerobiosis in Saccharomyces cerevisiae: differential response and role of Msn2 and/or Msn4 and other factors in galactose and glucose media. Mol. Cell. Biol. 25:4075-4091.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 4075-4091
-
-
Lai, L.C.1
Kosorukoff, A.L.2
Burke, P.V.3
Kwast, K.E.4
-
34
-
-
33748852396
-
Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae
-
Lai, L. C., A. L. Kosorukoff, P. V. Burke, and K. E. Kwast. 2006. Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae. Eukaryot. Cell 5:1468-1489.
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 1468-1489
-
-
Lai, L.C.1
Kosorukoff, A.L.2
Burke, P.V.3
Kwast, K.E.4
-
35
-
-
3042595446
-
A novel mode of chaperone action: Heme activation of Hap1 by enhanced association of Hsp90 with the repressed Hsp70-Hap1 complex
-
Lan, C., H. C. Lee, S. Tang, and L. Zhang. 2004. A novel mode of chaperone action: heme activation of Hap1 by enhanced association of Hsp90 with the repressed Hsp70-Hap1 complex. J. Biol. Chem. 279:27607-27612.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 27607-27612
-
-
Lan, C.1
Lee, H.C.2
Tang, S.3
Zhang, L.4
-
36
-
-
0036510579
-
The molecular chaperone Hsp90 mediates heme activation of the yeast transcriptional activator Hap1
-
Lee, H. C., T. Hon, and L. Zhang. 2002. The molecular chaperone Hsp90 mediates heme activation of the yeast transcriptional activator Hap1. J. Biol. Chem. 277:7430-7437.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 7430-7437
-
-
Lee, H.C.1
Hon, T.2
Zhang, L.3
-
37
-
-
0021812739
-
Involvement of heme biosynthesis in control of sterol uptake by Saccharomyces cerevisiae
-
Lewis, T. A., F. R. Taylor, and L. W. Parks. 1985. Involvement of heme biosynthesis in control of sterol uptake by Saccharomyces cerevisiae. J. Bacteriol. 163:199-207.
-
(1985)
J. Bacteriol
, vol.163
, pp. 199-207
-
-
Lewis, T.A.1
Taylor, F.R.2
Parks, L.W.3
-
38
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
Longtine, M. S., A. McKenzie III, D. J. Demarini, N. G. Shah, A. Wach, A. Brachat, P. Philippsen, and J. R. Pringle. 1998. Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14:953-961.
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie III, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
39
-
-
0023768278
-
ROX1 encodes a heme-induced repression factor regulating ANB1 and CYC7 of Saccharomyces cerevisiae
-
Lowry, C. V., and R. S. Zitomer. 1988. ROX1 encodes a heme-induced repression factor regulating ANB1 and CYC7 of Saccharomyces cerevisiae. Mol. Cell. Biol. 8:4651-4658.
-
(1988)
Mol. Cell. Biol
, vol.8
, pp. 4651-4658
-
-
Lowry, C.V.1
Zitomer, R.S.2
-
40
-
-
33750684669
-
Transcriptional repression by Tup1-Ssn6
-
Malavé, T. M., and S. Y. Dent. 2006. Transcriptional repression by Tup1-Ssn6. Biochem. Cell Biol. 84:437-443.
-
(2006)
Biochem. Cell Biol
, vol.84
, pp. 437-443
-
-
Malavé, T.M.1
Dent, S.Y.2
-
41
-
-
27744533201
-
Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae
-
Martens, J. A., P. Y. Wu, and F. Winston. 2005. Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae. Genes Dev. 19:2695-2704.
-
(2005)
Genes Dev
, vol.19
, pp. 2695-2704
-
-
Martens, J.A.1
Wu, P.Y.2
Winston, F.3
-
42
-
-
33747453769
-
Heme: A versatile signaling molecule controlling the activities of diverse regulators ranging from transcription factors to MAP kinases
-
Mense, S. M., and L. Zhang. 2006. Heme: a versatile signaling molecule controlling the activities of diverse regulators ranging from transcription factors to MAP kinases. Cell Res. 16:681-692.
-
(2006)
Cell Res
, vol.16
, pp. 681-692
-
-
Mense, S.M.1
Zhang, L.2
-
43
-
-
0031054127
-
Some DNA targets of the yeast CYP1 transcriptional activator are functionally asymmetric - evidence of two half-sites with different affinities
-
Näit-Kaoudjt, R., R. Williams, B. Guiard, and M. Gervais. 1997. Some DNA targets of the yeast CYP1 transcriptional activator are functionally asymmetric - evidence of two half-sites with different affinities. Eur. J. Biochem. 244:301-309.
-
(1997)
Eur. J. Biochem
, vol.244
, pp. 301-309
-
-
Näit-Kaoudjt, R.1
Williams, R.2
Guiard, B.3
Gervais, M.4
-
44
-
-
0024979286
-
Functional dissection and sequence of yeast HAP1 activator
-
Pfeifer, K., K. S. Kim, S. Kogan, and L. Guarente. 1989. Functional dissection and sequence of yeast HAP1 activator. Cell 56:291-301.
-
(1989)
Cell
, vol.56
, pp. 291-301
-
-
Pfeifer, K.1
Kim, K.S.2
Kogan, S.3
Guarente, L.4
-
45
-
-
0031009957
-
Heme regulates SOD2 transcription by activation and repression in Saccharomyces cerevisiae
-
Pinkham, J. L., Z. Wang, and J. Alsina. 1997. Heme regulates SOD2 transcription by activation and repression in Saccharomyces cerevisiae. Curr. Genet. 31:281-291.
-
(1997)
Curr. Genet
, vol.31
, pp. 281-291
-
-
Pinkham, J.L.1
Wang, Z.2
Alsina, J.3
-
46
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush, J. 2002. Microarray data normalization and transformation. Nat. Genet. 32(Suppl.):496-501.
-
(2002)
Nat. Genet
, vol.32
, Issue.SUPPL.
, pp. 496-501
-
-
Quackenbush, J.1
-
47
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
Ren, B., F. Robert, J. J. Wyrick, O. Aparicio, E. G. Jennings, I. Simon, J. Zeitlinger, J. Schreiber, N. Hannett, E. Kanin, T. L. Volkert, C. J. Wilson, S. P. Bell, and R. A. Young. 2000. Genome-wide location and function of DNA binding proteins. Science 290:2306-2309.
-
(2000)
Science
, vol.290
, pp. 2306-2309
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
Volkert, T.L.11
Wilson, C.J.12
Bell, S.P.13
Young, R.A.14
-
48
-
-
0028841139
-
Use of polymerase chain reaction epitope tagging for protein tagging in Saccharomyces cerevisiae
-
Schneider, B. L., W. Seufert, B. Steiner, Q. H. Yang, and A. B. Futcher. 1995. Use of polymerase chain reaction epitope tagging for protein tagging in Saccharomyces cerevisiae. Yeast 11:1265-1274.
-
(1995)
Yeast
, vol.11
, pp. 1265-1274
-
-
Schneider, B.L.1
Seufert, W.2
Steiner, B.3
Yang, Q.H.4
Futcher, A.B.5
-
49
-
-
0023692578
-
A regulatory region responsible for proline-specific induction of the yeast PUT2 gene is adjacent to its TATA box
-
Siddiqui, A. H., and M. C. Brandriss. 1988. A regulatory region responsible for proline-specific induction of the yeast PUT2 gene is adjacent to its TATA box. Mol. Cell. Biol. 8:4634-4641.
-
(1988)
Mol. Cell. Biol
, vol.8
, pp. 4634-4641
-
-
Siddiqui, A.H.1
Brandriss, M.C.2
-
50
-
-
0034903337
-
In vivo site-directed mutagenesis using oligonucleotides
-
Storici, F., L. K. Lewis, and M. A. Resnick. 2001. In vivo site-directed mutagenesis using oligonucleotides. Nat. Biotechnol. 19:773-776.
-
(2001)
Nat. Biotechnol
, vol.19
, pp. 773-776
-
-
Storici, F.1
Lewis, L.K.2
Resnick, M.A.3
-
51
-
-
0034672687
-
Conservation of eukaryotic sterol homeostasis: New insights from studies in budding yeast
-
Sturley, S. L. 2000. Conservation of eukaryotic sterol homeostasis: new insights from studies in budding yeast. Biochim. Biophys. Acta 1529:155-163.
-
(2000)
Biochim. Biophys. Acta
, vol.1529
, pp. 155-163
-
-
Sturley, S.L.1
-
52
-
-
6944233429
-
A hap1 mutation in a laboratory strain of Saccharomyces cerevisiae results in decreased expression of ergosterol-related genes and cellular ergosterol content compared to sake yeast
-
Tamura, K., Y. Gu, Q. Wang, T. Yamada, K. Ito, and H. Shimoi. 2004. A hap1 mutation in a laboratory strain of Saccharomyces cerevisiae results in decreased expression of ergosterol-related genes and cellular ergosterol content compared to sake yeast. J. Biosci. Bioeng. 98:159-166.
-
(2004)
J. Biosci. Bioeng
, vol.98
, pp. 159-166
-
-
Tamura, K.1
Gu, Y.2
Wang, Q.3
Yamada, T.4
Ito, K.5
Shimoi, H.6
-
53
-
-
0032762991
-
Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae
-
ter Linde, J. J., H. Liang, R. W. Davis, H. Y. Steensma, J. P. van Dijken, and J. T. Pronk. 1999. Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae. J. Bacteriol. 181: 7409-7413.
-
(1999)
J. Bacteriol
, vol.181
, pp. 7409-7413
-
-
ter Linde, J.J.1
Liang, H.2
Davis, R.W.3
Steensma, H.Y.4
van Dijken, J.P.5
Pronk, J.T.6
-
54
-
-
0036317761
-
A microarray-assisted screen for potential Hap1 and Rox1 target genes in Saccharomyces cerevisiae
-
Ter Linde, J. J., and H. Y. Steensma. 2002. A microarray-assisted screen for potential Hap1 and Rox1 target genes in Saccharomyces cerevisiae. Yeast 19:825-840.
-
(2002)
Yeast
, vol.19
, pp. 825-840
-
-
Ter Linde, J.J.1
Steensma, H.Y.2
-
55
-
-
0017080130
-
Location and regulation of early enzymes of sterol biosynthesis in yeast
-
Trocha, P. J., and D. B. Sprinson. 1976. Location and regulation of early enzymes of sterol biosynthesis in yeast. Arch. Biochem. Biophys. 174:45-51.
-
(1976)
Arch. Biochem. Biophys
, vol.174
, pp. 45-51
-
-
Trocha, P.J.1
Sprinson, D.B.2
-
56
-
-
0026598738
-
Multiple regulatory elements control expression of the gene encoding the Saccharomyces cerevisiae cytochrome P450, lanosterol 14α-demethylase (ERG11)
-
Turi, T. G., and J. C. Loper. 1992. Multiple regulatory elements control expression of the gene encoding the Saccharomyces cerevisiae cytochrome P450, lanosterol 14α-demethylase (ERG11). J. Biol. Chem. 267:2046-2056.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 2046-2056
-
-
Turi, T.G.1
Loper, J.C.2
-
57
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher, V. G., R. Tibshirani, and G. Chu. 2001. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA 98:5116-5121.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
58
-
-
0028297158
-
A novel allele of HAP1 causes uninducible expression of HEM13 in Saccharomyces cerevisiae
-
Ushinsky, S. C., and T. Keng. 1994. A novel allele of HAP1 causes uninducible expression of HEM13 in Saccharomyces cerevisiae. Genetics 136:819- 831.
-
(1994)
Genetics
, vol.136
, pp. 819-831
-
-
Ushinsky, S.C.1
Keng, T.2
-
59
-
-
0025739041
-
CYP1 (HAP1) is a determinant effector of alternative expression of heme-dependent transcribed genes in yeast
-
Verdière, J., M. Gaisne, and R. Labbe-Bois. 1991. CYP1 (HAP1) is a determinant effector of alternative expression of heme-dependent transcribed genes in yeast. Mol. Gen. Genet. 228:300-306.
-
(1991)
Mol. Gen. Genet
, vol.228
, pp. 300-306
-
-
Verdière, J.1
Gaisne, M.2
Labbe-Bois, R.3
-
60
-
-
0034810736
-
Upc2p and Ecm22p, dual regulators of sterol biosynthesis in Saccharomyces cerevisiae
-
Vik, A., and J. Rine. 2001. Upc2p and Ecm22p, dual regulators of sterol biosynthesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 21:6395-6405.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 6395-6405
-
-
Vik, A.1
Rine, J.2
-
61
-
-
0034107952
-
Mammalian oxygen sensing, signalling and gene regulation
-
Wenger, R. H. 2000. Mammalian oxygen sensing, signalling and gene regulation. J. Exp. Biol. 203:1253-1263.
-
(2000)
J. Exp. Biol
, vol.203
, pp. 1253-1263
-
-
Wenger, R.H.1
-
62
-
-
0028794516
-
Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C
-
Winston, F., C. Dollard, and S. L. Ricupero-Hovasse. 1995. Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C. Yeast 11:53-55.
-
(1995)
Yeast
, vol.11
, pp. 53-55
-
-
Winston, F.1
Dollard, C.2
Ricupero-Hovasse, S.L.3
-
63
-
-
0033119162
-
Coactivator and corepressor complexes in nuclear receptor function
-
Xu, L., C. K. Glass, and M. G. Rosenfeld. 1999. Coactivator and corepressor complexes in nuclear receptor function. Curr. Opin. Genet. Dev. 9:140-147.
-
(1999)
Curr. Opin. Genet. Dev
, vol.9
, pp. 140-147
-
-
Xu, L.1
Glass, C.K.2
Rosenfeld, M.G.3
-
64
-
-
0023758444
-
Isolation, sequence, and regulation by oxygen of the yeast HEM13 gene coding for coproporphyrinogen oxidase
-
Zagorec, M., J.-M. Buhler, I. Treich, T. Keng, L. Guarente, and R. Labbe-Bois. 1988. Isolation, sequence, and regulation by oxygen of the yeast HEM13 gene coding for coproporphyrinogen oxidase. J. Biol. Chem. 263: 9718-9724.
-
(1988)
J. Biol. Chem
, vol.263
, pp. 9718-9724
-
-
Zagorec, M.1
Buhler, J.-M.2
Treich, I.3
Keng, T.4
Guarente, L.5
Labbe-Bois, R.6
-
65
-
-
0032729833
-
Molecular mechanism of heme signaling in yeast: The transcriptional activator Hap1 serves as the key mediator
-
Zhang, L., and A. Hach. 1999. Molecular mechanism of heme signaling in yeast: the transcriptional activator Hap1 serves as the key mediator. Cell. Mol. Life Sci. 56:415-426.
-
(1999)
Cell. Mol. Life Sci
, vol.56
, pp. 415-426
-
-
Zhang, L.1
Hach, A.2
|