-
1
-
-
0028987952
-
The Major Evolutionary Transitions
-
Szathmary E, Smith JM, (1995) The Major Evolutionary Transitions. Nature 374: 227-232.
-
(1995)
Nature
, vol.374
, pp. 227-232
-
-
Szathmary, E.1
Smith, J.M.2
-
2
-
-
0345306751
-
The origins of genome complexity
-
Lynch M, Conery JS, (2003) The origins of genome complexity. Science 302: 1401-1404.
-
(2003)
Science
, vol.302
, pp. 1401-1404
-
-
Lynch, M.1
Conery, J.S.2
-
3
-
-
0031916242
-
Rates of spontaneous mutation
-
Drake JW, Charlesworth B, Charlesworth D, Crow JF, (1998) Rates of spontaneous mutation. Genetics 148: 1667-1686.
-
(1998)
Genetics
, vol.148
, pp. 1667-1686
-
-
Drake, J.W.1
Charlesworth, B.2
Charlesworth, D.3
Crow, J.F.4
-
4
-
-
0034542564
-
The evolution of mutation rates: separating causes from consequences
-
Sniegowski PD, Gerrish PJ, Johnson T, Shaver A, (2000) The evolution of mutation rates: separating causes from consequences. Bioessays 22: 1057-1066.
-
(2000)
Bioessays
, vol.22
, pp. 1057-1066
-
-
Sniegowski, P.D.1
Gerrish, P.J.2
Johnson, T.3
Shaver, A.4
-
5
-
-
62149152282
-
Extremely High Mutation Rate of a Hammerhead Viroid
-
Gago S, Elena SF, Flores R, Sanjuan R, (2009) Extremely High Mutation Rate of a Hammerhead Viroid. Science 323: 1308.
-
(2009)
Science
, vol.323
, pp. 1308
-
-
Gago, S.1
Elena, S.F.2
Flores, R.3
Sanjuan, R.4
-
6
-
-
77955090647
-
Evolution of the mutation rate
-
Lynch M, (2010) Evolution of the mutation rate. Trends Genet 26: 345-352.
-
(2010)
Trends Genet
, vol.26
, pp. 345-352
-
-
Lynch, M.1
-
7
-
-
77956826336
-
Viral Mutation Rates
-
Sanjuan R, Nebot MR, Chirico N, Mansky LM, Belshaw R, (2010) Viral Mutation Rates. J Virol 84: 9733-9748.
-
(2010)
J Virol
, vol.84
, pp. 9733-9748
-
-
Sanjuan, R.1
Nebot, M.R.2
Chirico, N.3
Mansky, L.M.4
Belshaw, R.5
-
8
-
-
0027064537
-
Lack of Evidence for Proofreading Mechanisms Associated with An Rna Virus Polymerase
-
Steinhauer DA, Domingo E, Holland JJ, (1992) Lack of Evidence for Proofreading Mechanisms Associated with An Rna Virus Polymerase. Gene 122: 281-288.
-
(1992)
Gene
, vol.122
, pp. 281-288
-
-
Steinhauer, D.A.1
Domingo, E.2
Holland, J.J.3
-
9
-
-
80052502566
-
What Does Virus Evolution Tell Us about Virus Origins?
-
Holmes EC, (2011) What Does Virus Evolution Tell Us about Virus Origins? J Virol 85: 5247-5251.
-
(2011)
J Virol
, vol.85
, pp. 5247-5251
-
-
Holmes, E.C.1
-
10
-
-
80053447519
-
Discovery of the First Insect Nidovirus, a Missing Evolutionary Link in the Emergence of the Largest RNA Virus Genomes
-
Nga PT, Parquet MD, Lauber C, Parida M, Nabeshima T, et al. (2011) Discovery of the First Insect Nidovirus, a Missing Evolutionary Link in the Emergence of the Largest RNA Virus Genomes. PLoS Pathog 7: e1002215.
-
(2011)
PLoS Pathog
, vol.7
-
-
Nga, P.T.1
Parquet, M.D.2
Lauber, C.3
Parida, M.4
Nabeshima, T.5
-
11
-
-
0015133749
-
Selforganization of Matter and Evolution of Biological Macromolecules
-
Eigen M, (1971) Selforganization of Matter and Evolution of Biological Macromolecules. Naturwissenschaften 58: 465-523.
-
(1971)
Naturwissenschaften
, vol.58
, pp. 465-523
-
-
Eigen, M.1
-
12
-
-
25144450882
-
Real ribozymes suggest a relaxed error threshold
-
Kun A, Santos M, Szathmary E, (2005) Real ribozymes suggest a relaxed error threshold. Nat Genet 37: 1008-1011.
-
(2005)
Nat Genet
, vol.37
, pp. 1008-1011
-
-
Kun, A.1
Santos, M.2
Szathmary, E.3
-
14
-
-
0042164218
-
Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage
-
Snijder EJ, Bredenbeek PJ, Dobbe JC, Thiel V, Ziebuhr J, et al. (2003) Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage. J Mol Biol 331: 991-1004.
-
(2003)
J Mol Biol
, vol.331
, pp. 991-1004
-
-
Snijder, E.J.1
Bredenbeek, P.J.2
Dobbe, J.C.3
Thiel, V.4
Ziebuhr, J.5
-
15
-
-
53549118037
-
-
Eds, Washington, DC: ASM Press
-
Perlman S., Gallagher T., and Snijder, E J., Eds. (2008) Nidoviruses. Washington, DC: ASM Press.
-
(2008)
Nidoviruses
-
-
Perlman, S.1
Gallagher, T.2
Snijder, E.J.3
-
16
-
-
84861158023
-
Order Nidovirales
-
In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors, Ninth Report of the International Committee on Taxonomy of Viruses. Amsterdam: Elsevier Academic Press
-
de Groot RJ, Cowley JA, Enjuanes L, Faaberg KS, Perlman S, et al. (2012) Order Nidovirales. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors. Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses. Amsterdam: Elsevier Academic Press. pp. 785-795.
-
(2012)
Virus Taxonomy
, pp. 785-795
-
-
de Groot, R.J.1
Cowley, J.A.2
Enjuanes, L.3
Faaberg, K.S.4
Perlman, S.5
-
17
-
-
84864480351
-
Family Roniviridae
-
In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors, Amsterdam: Elsevier Academic Press
-
Cowley JA, Walker PJ, Flegel TW, Lightner DV, Bonami JR, et al. (2012) Family Roniviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors. Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses. Amsterdam: Elsevier Academic Press. pp. 829-834.
-
(2012)
Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses
, pp. 829-834
-
-
Cowley, J.A.1
Walker, P.J.2
Flegel, T.W.3
Lightner, D.V.4
Bonami, J.R.5
-
18
-
-
84861109264
-
Family Coronaviridae
-
In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors, Amsterdam: Elsevier Academic Press
-
de Groot RJ, Baker SC, Baric R, Enjuanes L, Gorbalenya AE, et al. (2012) Family Coronaviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors. Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses. Amsterdam: Elsevier Academic Press. pp. 806-828.
-
(2012)
Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses
, pp. 806-828
-
-
de Groot, R.J.1
Baker, S.C.2
Baric, R.3
Enjuanes, L.4
Gorbalenya, A.E.5
-
19
-
-
33645093947
-
Nidovirales: Evolving the largest RNA virus genome
-
Gorbalenya AE, Enjuanes L, Ziebuhr J, Snijder EJ, (2006) Nidovirales: Evolving the largest RNA virus genome. Virus Res 117: 17-37.
-
(2006)
Virus Res
, vol.117
, pp. 17-37
-
-
Gorbalenya, A.E.1
Enjuanes, L.2
Ziebuhr, J.3
Snijder, E.J.4
-
20
-
-
84864007198
-
Family Arteriviridae
-
In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors, Amsterdam: Elsevier Academic Press
-
Faaberg KS, Balasuriya UB, Brinton MA, Gorbalenya AE, Leung FC-C, et al. (2012) Family Arteriviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ, editors. Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses. Amsterdam: Elsevier Academic Press. pp. 796-805.
-
(2012)
Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses
, pp. 796-805
-
-
Faaberg, K.S.1
Balasuriya, U.B.2
Brinton, M.A.3
Gorbalenya, A.E.4
Leung, F.C.-C.5
-
21
-
-
84864441738
-
Mesoniviridae: a new family in the order Nidovirales formed by a single species of mosquito-borne viruses
-
Lauber C, Ziebuhr J, Junglen S, Drosten C, Zirkel F, et al. (2012) Mesoniviridae: a new family in the order Nidovirales formed by a single species of mosquito-borne viruses. Arch Virol 157: 1623-1628.
-
(2012)
Arch Virol
, vol.157
, pp. 1623-1628
-
-
Lauber, C.1
Ziebuhr, J.2
Junglen, S.3
Drosten, C.4
Zirkel, F.5
-
22
-
-
84883300219
-
Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013)
-
doi 10.1007/s00705-013-1688-5
-
Adams MJ, King AMQ, Carstens EB, (2013) Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013). Arch Virol 158: 1181-8 doi:10.1007/s00705-013-1688-5.
-
(2013)
Arch Virol
, vol.158
, pp. 1181-1188
-
-
Adams, M.J.1
King, A.M.Q.2
Carstens, E.B.3
-
23
-
-
0023264833
-
Completion of the sequence of the genome of the coronavirus avian infectious bronchitis virus
-
Boursnell MEG, Brown TDK, Foulds IJ, Green PF, Tomley FM, et al. (1987) Completion of the sequence of the genome of the coronavirus avian infectious bronchitis virus. J Gen Virol 68: 57-77.
-
(1987)
J Gen Virol
, vol.68
, pp. 57-77
-
-
Boursnell, M.E.G.1
Brown, T.D.K.2
Foulds, I.J.3
Green, P.F.4
Tomley, F.M.5
-
24
-
-
0026040484
-
Equine arteritis virus is not a togavirus but belongs to the coronaviruslike superfamily
-
den Boon JA, Snijder EJ, Chirnside ED, de Vries AA, Horzinek MC, et al. (1991) Equine arteritis virus is not a togavirus but belongs to the coronaviruslike superfamily. J Virol 65: 2910-2920.
-
(1991)
J Virol
, vol.65
, pp. 2910-2920
-
-
den Boon, J.A.1
Snijder, E.J.2
Chirnside, E.D.3
de Vries, A.A.4
Horzinek, M.C.5
-
25
-
-
0036402693
-
The complete genome sequence of gill-associated virus of Penaeus monodon prawns indicates a gene organization unique among nidoviruses
-
Cowley JA, Walker PJ, (2002) The complete genome sequence of gill-associated virus of Penaeus monodon prawns indicates a gene organization unique among nidoviruses. Arch Virol 147: 1977-1987.
-
(2002)
Arch Virol
, vol.147
, pp. 1977-1987
-
-
Cowley, J.A.1
Walker, P.J.2
-
26
-
-
84855197858
-
An Insect Nidovirus Emerging from a Primary Tropical Rainforest
-
Zirkel F, Kurth A, Quan PL, Briese T, Ellerbrok H, et al. (2011) An Insect Nidovirus Emerging from a Primary Tropical Rainforest. mBio 2: e00077-11.
-
(2011)
MBio
, vol.2
-
-
Zirkel, F.1
Kurth, A.2
Quan, P.L.3
Briese, T.4
Ellerbrok, H.5
-
27
-
-
0023512767
-
An efficient ribosomal frame-shifting signal in the polymerase-encoding region of the coronavirus IBV
-
Brierley I, Boursnell ME, Binns MM, Bilimoria B, Blok VC, et al. (1987) An efficient ribosomal frame-shifting signal in the polymerase-encoding region of the coronavirus IBV. EMBO J 6: 3779-3785.
-
(1987)
EMBO J
, vol.6
, pp. 3779-3785
-
-
Brierley, I.1
Boursnell, M.E.2
Binns, M.M.3
Bilimoria, B.4
Blok, V.C.5
-
28
-
-
22744450786
-
A three-stemmed mRNA pseudoknot in the SARS coronavirus frameshift signal
-
Plant EP, Perez-Alvarado GC, Jacobs JL, Mukhopadhyay B, Hennig M, et al. (2005) A three-stemmed mRNA pseudoknot in the SARS coronavirus frameshift signal. PLoS Biol 3: 1012-1023.
-
(2005)
PLoS Biol
, vol.3
, pp. 1012-1023
-
-
Plant, E.P.1
Perez-Alvarado, G.C.2
Jacobs, J.L.3
Mukhopadhyay, B.4
Hennig, M.5
-
29
-
-
84862642115
-
Non-canonical translation in RNA viruses
-
Firth AE, Brierley I, (2012) Non-canonical translation in RNA viruses. J Gen Virol 93: 1385-1409.
-
(2012)
J Gen Virol
, vol.93
, pp. 1385-1409
-
-
Firth, A.E.1
Brierley, I.2
-
30
-
-
0034072633
-
Virus-encoded proteinases and proteolytic processing in the Nidovirales
-
Ziebuhr J, Snijder EJ, Gorbalenya AE, (2000) Virus-encoded proteinases and proteolytic processing in the Nidovirales. J Gen Virol 81: 853-879.
-
(2000)
J Gen Virol
, vol.81
, pp. 853-879
-
-
Ziebuhr, J.1
Snijder, E.J.2
Gorbalenya, A.E.3
-
31
-
-
0032787420
-
The putative helicase of the coronavirus mouse hepatitis virus is processed from the replicase gene polyprotein and localizes in complexes that are active in viral RNA synthesis
-
Denison MR, Spaan WJ, van der Meer Y, Gibson CA, Sims AC, et al. (1999) The putative helicase of the coronavirus mouse hepatitis virus is processed from the replicase gene polyprotein and localizes in complexes that are active in viral RNA synthesis. J Virol 73: 6862-6871.
-
(1999)
J Virol
, vol.73
, pp. 6862-6871
-
-
Denison, M.R.1
Spaan, W.J.2
van der Meer, Y.3
Gibson, C.A.4
Sims, A.C.5
-
32
-
-
0032989122
-
Colocalization and membrane association of murine hepatitis virus gene 1 products and De novo-synthesized viral RNA in infected cells
-
Shi ST, Schiller JJ, Kanjanahaluethai A, Baker SC, Oh JW, et al. (1999) Colocalization and membrane association of murine hepatitis virus gene 1 products and De novo-synthesized viral RNA in infected cells. J Virol 73: 5957-5969.
-
(1999)
J Virol
, vol.73
, pp. 5957-5969
-
-
Shi, S.T.1
Schiller, J.J.2
Kanjanahaluethai, A.3
Baker, S.C.4
Oh, J.W.5
-
33
-
-
44449098281
-
SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity in vitro
-
van Hemert MJ, van den Worm SHE, Knoops K, Mommaas AM, Gorbalenya AE, et al. (2008) SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity in vitro. PLoS Pathog 4: e1000054.
-
(2008)
PLoS Pathog
, vol.4
-
-
van Hemert, M.J.1
van den Worm, S.H.E.2
Knoops, K.3
Mommaas, A.M.4
Gorbalenya, A.E.5
-
34
-
-
33744794434
-
Functional and genetic analysis of coronavirus replicase-transcriptase proteins
-
Sawicki SG, Sawicki DL, Younker D, Meyer Y, Thiel V, et al. (2005) Functional and genetic analysis of coronavirus replicase-transcriptase proteins. PLoS Pathog 1: 310-322.
-
(2005)
PLoS Pathog
, vol.1
, pp. 310-322
-
-
Sawicki, S.G.1
Sawicki, D.L.2
Younker, D.3
Meyer, Y.4
Thiel, V.5
-
35
-
-
0034990084
-
Viral replicase gene products suffice for coronavirus discontinuous transcription
-
Thiel V, Herold J, Schelle B, Siddell SG, (2001) Viral replicase gene products suffice for coronavirus discontinuous transcription. J Virol 75: 6676-6681.
-
(2001)
J Virol
, vol.75
, pp. 6676-6681
-
-
Thiel, V.1
Herold, J.2
Schelle, B.3
Siddell, S.G.4
-
36
-
-
0031879009
-
ORF1a-encoded replicase subunits are involved in the membrane association of the arterivirus replication complex
-
van der Meer Y, van Tol H, Locker JK, Snijder EJ, (1998) ORF1a-encoded replicase subunits are involved in the membrane association of the arterivirus replication complex. J Virol 72: 6689-98.
-
(1998)
J Virol
, vol.72
, pp. 6689-6698
-
-
van der Meer, Y.1
van Tol, H.2
Locker, J.K.3
Snijder, E.J.4
-
37
-
-
10044268025
-
Identification of Severe Acute Respiratory Syndrome Coronavirus Replicase Products and Characterization of Papain-Like Protease Activity
-
Harcourt BH, Jukneliene D, Kanjanahaluethai A, Bechill J, Severson KM, et al. (2004) Identification of Severe Acute Respiratory Syndrome Coronavirus Replicase Products and Characterization of Papain-Like Protease Activity. J Virol 78: 13600-13612.
-
(2004)
J Virol
, vol.78
, pp. 13600-13612
-
-
Harcourt, B.H.1
Jukneliene, D.2
Kanjanahaluethai, A.3
Bechill, J.4
Severson, K.M.5
-
38
-
-
67449088503
-
Detection of Nonstructural Protein 6 in Murine Coronavirus-Infected Cells and Analysis of the Transmembrane Topology by Using Bioinformatics and Molecular Approaches
-
Baliji S, Cammer SA, Sobral B, Baker SC, (2009) Detection of Nonstructural Protein 6 in Murine Coronavirus-Infected Cells and Analysis of the Transmembrane Topology by Using Bioinformatics and Molecular Approaches. J Virol 83: 6957-6962.
-
(2009)
J Virol
, vol.83
, pp. 6957-6962
-
-
Baliji, S.1
Cammer, S.A.2
Sobral, B.3
Baker, S.C.4
-
40
-
-
33845750075
-
A contemporary view of coronavirus transcription
-
Sawicki SG, Sawicki DL, Siddell SG, (2007) A contemporary view of coronavirus transcription. J Virol 81: 20-29.
-
(2007)
J Virol
, vol.81
, pp. 20-29
-
-
Sawicki, S.G.1
Sawicki, D.L.2
Siddell, S.G.3
-
42
-
-
33750333638
-
Biochemical aspects of coronavirus replication and virus-host interaction
-
Enjuanes L, Almazan F, Sola I, Zuniga S, (2006) Biochemical aspects of coronavirus replication and virus-host interaction. Ann Rev Microbiol 60: 211-230.
-
(2006)
Ann Rev Microbiol
, vol.60
, pp. 211-230
-
-
Enjuanes, L.1
Almazan, F.2
Sola, I.3
Zuniga, S.4
-
43
-
-
33746317830
-
The molecular biology of coronaviruses
-
Masters PS, (2006) The molecular biology of coronaviruses. Adv Virus Res 66: 193-292.
-
(2006)
Adv Virus Res
, vol.66
, pp. 193-292
-
-
Masters, P.S.1
-
44
-
-
33645461049
-
Structure, function and evolution of the hemagglutinin-esterase proteins of corona- and toroviruses
-
de Groot RJ, (2006) Structure, function and evolution of the hemagglutinin-esterase proteins of corona- and toroviruses. Glycoconjugate Journal 23: 59-72.
-
(2006)
Glycoconjugate Journal
, vol.23
, pp. 59-72
-
-
de Groot, R.J.1
-
45
-
-
57349129557
-
Mechanisms of Severe Acute Respiratory Syndrome Pathogenesis and Innate Immunomodulation
-
Frieman M, Baric R, (2008) Mechanisms of Severe Acute Respiratory Syndrome Pathogenesis and Innate Immunomodulation. Microbiology and Molecular Biology Reviews 72: 672-685.
-
(2008)
Microbiology and Molecular Biology Reviews
, vol.72
, pp. 672-685
-
-
Frieman, M.1
Baric, R.2
-
46
-
-
40649099616
-
SARS coronavirus replicase proteins in pathogenesis
-
Graham RL, Sparks JS, Eckerle LD, Sims AC, Denison MR, (2008) SARS coronavirus replicase proteins in pathogenesis. Virus Res 133: 88-100.
-
(2008)
Virus Res
, vol.133
, pp. 88-100
-
-
Graham, R.L.1
Sparks, J.S.2
Eckerle, L.D.3
Sims, A.C.4
Denison, M.R.5
-
47
-
-
78751637122
-
Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5
-
Zust R, Cervantes-Barragan L, Habjan M, Maier R, Neuman BW, et al. (2011) Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5. Nat Immunol 12: 137-143.
-
(2011)
Nat Immunol
, vol.12
, pp. 137-143
-
-
Zust, R.1
Cervantes-Barragan, L.2
Habjan, M.3
Maier, R.4
Neuman, B.W.5
-
48
-
-
84862297105
-
Antagonism of the Interferon-Induced OAS-RNase L Pathway by Murine Coronavirus ns2 Protein Is Required for Virus Replication and Liver Pathology
-
Zhao L, Jha BK, Wu A, Elliott R, Ziebuhr J, et al. (2012) Antagonism of the Interferon-Induced OAS-RNase L Pathway by Murine Coronavirus ns2 Protein Is Required for Virus Replication and Liver Pathology. Cell Host & Microbe 11: 607-616.
-
(2012)
Cell Host & Microbe
, vol.11
, pp. 607-616
-
-
Zhao, L.1
Jha, B.K.2
Wu, A.3
Elliott, R.4
Ziebuhr, J.5
-
49
-
-
0024398958
-
Coronavirus genome: prediction of putative functional domains in the non-structural polyprotein by comparative amino acid sequence analysis
-
Gorbalenya AE, Koonin EV, Donchenko AP, Blinov VM, (1989) Coronavirus genome: prediction of putative functional domains in the non-structural polyprotein by comparative amino acid sequence analysis. Nucl Acids Res 17: 4847-4861.
-
(1989)
Nucl Acids Res
, vol.17
, pp. 4847-4861
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
Donchenko, A.P.3
Blinov, V.M.4
-
50
-
-
0036646055
-
Structure of coronavirus main proteinase reveals combination of a chymotrypsin fold with an extra alpha-helical domain
-
Anand K, Palm GJ, Mesters JR, Siddell SG, Ziebuhr J, et al. (2002) Structure of coronavirus main proteinase reveals combination of a chymotrypsin fold with an extra alpha-helical domain. EMBO J 21: 3213-3224.
-
(2002)
EMBO J
, vol.21
, pp. 3213-3224
-
-
Anand, K.1
Palm, G.J.2
Mesters, J.R.3
Siddell, S.G.4
Ziebuhr, J.5
-
51
-
-
0037131373
-
Structure of arterivirus nsp4 - The smallest chymotrypsin-like proteinase with an alpha/beta C-terminal extension and alternate conformations of the oxyanion hole
-
Barrette-Ng IH, Ng KKS, Mark BL, van Aken D, Cherney MM, et al. (2002) Structure of arterivirus nsp4- The smallest chymotrypsin-like proteinase with an alpha/beta C-terminal extension and alternate conformations of the oxyanion hole. J Biol Chem 277: 39960-39966.
-
(2002)
J Biol Chem
, vol.277
, pp. 39960-39966
-
-
Barrette-Ng, I.H.1
Ng, K.K.S.2
Mark, B.L.3
van Aken, D.4
Cherney, M.M.5
-
52
-
-
17444431570
-
Expression, purification, and characterization of SARS coronavirus RNA polymerase
-
Cheng A, Zhang W, Xie Y, Jiang W, Arnold E, et al. (2005) Expression, purification, and characterization of SARS coronavirus RNA polymerase. Virology 335: 165-176.
-
(2005)
Virology
, vol.335
, pp. 165-176
-
-
Cheng, A.1
Zhang, W.2
Xie, Y.3
Jiang, W.4
Arnold, E.5
-
53
-
-
75649133168
-
The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent
-
te Velthuis AJW, Arnold JJ, Cameron CE, van den Worm SHE, Snijder EJ, (2010) The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent. Nucl Acids Res 38: 203-214.
-
(2010)
Nucl Acids Res
, vol.38
, pp. 203-214
-
-
te Velthuis, A.J.W.1
Arnold, J.J.2
Cameron, C.E.3
van den Worm, S.H.E.4
Snijder, E.J.5
-
54
-
-
0024278568
-
A new superfamily of replicative proteins
-
Hodgman TC, (1988) A new superfamily of replicative proteins. Nature 333: 22-23.
-
(1988)
Nature
, vol.333
, pp. 22-23
-
-
Hodgman, T.C.1
-
55
-
-
0023705613
-
A novel superfamily of nucleoside triphosphate-binding motif containing proteins which are probably involved in duplex unwinding in DNA and RNA replication and recombination
-
Gorbalenya AE, Koonin EV, Donchenko AP, Blinov VM, (1988) A novel superfamily of nucleoside triphosphate-binding motif containing proteins which are probably involved in duplex unwinding in DNA and RNA replication and recombination. FEBS Lett 235: 16-24.
-
(1988)
FEBS Lett
, vol.235
, pp. 16-24
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
Donchenko, A.P.3
Blinov, V.M.4
-
56
-
-
0033941814
-
The human coronavirus 229E superfamily 1 helicase has RNA and DNA duplex-unwinding activities with 5′-to-3′ polarity
-
Seybert A, Hegyi A, Siddell SG, Ziebuhr J, (2000) The human coronavirus 229E superfamily 1 helicase has RNA and DNA duplex-unwinding activities with 5′-to-3′ polarity. RNA 6: 1056-1068.
-
(2000)
RNA
, vol.6
, pp. 1056-1068
-
-
Seybert, A.1
Hegyi, A.2
Siddell, S.G.3
Ziebuhr, J.4
-
57
-
-
0033818909
-
Biochemical characterization of the equine arteritis virus helicase suggests a close functional relationship between arterivirus and coronavirus helicases
-
Seybert A, van Dinten LC, Snijder EJ, Ziebuhr J, (2000) Biochemical characterization of the equine arteritis virus helicase suggests a close functional relationship between arterivirus and coronavirus helicases. J Virol 74: 9586-9593.
-
(2000)
J Virol
, vol.74
, pp. 9586-9593
-
-
Seybert, A.1
van Dinten, L.C.2
Snijder, E.J.3
Ziebuhr, J.4
-
58
-
-
0035701786
-
Big nidovirus genome - When count and order of domains matter
-
Gorbalenya AE, (2001) Big nidovirus genome- When count and order of domains matter. Adv Exp Med Biol 494: 1-17.
-
(2001)
Adv Exp Med Biol
, vol.494
, pp. 1-17
-
-
Gorbalenya, A.E.1
-
59
-
-
33645518839
-
Discovery of an RNA virus 3′→5′ exoribonuclease that is critically involved in coronavirus RNA synthesis
-
Minskaia E, Hertzig T, Gorbalenya AE, Campanacci V, Cambillau C, et al. (2006) Discovery of an RNA virus 3′→5′ exoribonuclease that is critically involved in coronavirus RNA synthesis. Proc Natl Acad Sci U S A 103: 5108-5113.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 5108-5113
-
-
Minskaia, E.1
Hertzig, T.2
Gorbalenya, A.E.3
Campanacci, V.4
Cambillau, C.5
-
60
-
-
36048969246
-
High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants
-
Eckerle LD, Lu X, Sperry SM, Choi L, Denison MR, (2007) High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants. J Virol 81: 12135-12144.
-
(2007)
J Virol
, vol.81
, pp. 12135-12144
-
-
Eckerle, L.D.1
Lu, X.2
Sperry, S.M.3
Choi, L.4
Denison, M.R.5
-
61
-
-
77954055072
-
Infidelity of SARS-CoV Nsp14-Exonuclease Mutant Virus Replication Is Revealed by Complete Genome Sequencing
-
Eckerle LD, Becker MM, Halpin RA, Li K, Venter E, et al. (2010) Infidelity of SARS-CoV Nsp14-Exonuclease Mutant Virus Replication Is Revealed by Complete Genome Sequencing. PLoS Pathog 6: e1000896.
-
(2010)
PLoS Pathog
, vol.6
-
-
Eckerle, L.D.1
Becker, M.M.2
Halpin, R.A.3
Li, K.4
Venter, E.5
-
62
-
-
84862203582
-
RNA 3′-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex
-
Bouvet M, Imbert I, Subissi L, Gluasis L, Canard B, et al. (2012) RNA 3′-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex. Proc Natl Acad Sci U S A 109: 9372-9377.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 9372-9377
-
-
Bouvet, M.1
Imbert, I.2
Subissi, L.3
Gluasis, L.4
Canard, B.5
-
63
-
-
84870946428
-
A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease
-
Graham RL, Becker MM, Eckerle LD, Bolles M, Denison MR, et al. (2012) A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease. Nat Med 18: 1820-1826.
-
(2012)
Nat Med
, vol.18
, pp. 1820-1826
-
-
Graham, R.L.1
Becker, M.M.2
Eckerle, L.D.3
Bolles, M.4
Denison, M.R.5
-
64
-
-
79954525912
-
Coronaviruses: An RNA proofreading machine regulates replication fidelity and diversity
-
Denison MR, Graham RL, Donaldson EF, Eckerle LD, Baric RS, (2011) Coronaviruses: An RNA proofreading machine regulates replication fidelity and diversity. RNA Biol 8: 270-279.
-
(2011)
RNA Biol
, vol.8
, pp. 270-279
-
-
Denison, M.R.1
Graham, R.L.2
Donaldson, E.F.3
Eckerle, L.D.4
Baric, R.S.5
-
65
-
-
84867395887
-
Implications of altered replication fidelity on the evolution and pathogenesis of coronaviruses
-
Smith EC, Denison MR, (2012) Implications of altered replication fidelity on the evolution and pathogenesis of coronaviruses. Curr Opin Virol 2: 519-524.
-
(2012)
Curr Opin Virol
, vol.2
, pp. 519-524
-
-
Smith, E.C.1
Denison, M.R.2
-
66
-
-
57749185463
-
Parallel adaptations to high temperatures in the Archaean eon
-
Boussau B, Blanquart S, Necsulea A, Lartillot N, Gouy M, (2008) Parallel adaptations to high temperatures in the Archaean eon. Nature 456: 942-945.
-
(2008)
Nature
, vol.456
, pp. 942-945
-
-
Boussau, B.1
Blanquart, S.2
Necsulea, A.3
Lartillot, N.4
Gouy, M.5
-
67
-
-
62549159638
-
Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase
-
Chen Y, Cai H, Pan J, Xiang N, Tien P, et al. (2009) Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase. Proc Natl Acad Sci U S A 106: 3484-3489.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 3484-3489
-
-
Chen, Y.1
Cai, H.2
Pan, J.3
Xiang, N.4
Tien, P.5
-
68
-
-
4344592314
-
Major genetic marker of nidoviruses encodes a replicative endoribonuclease
-
Ivanov KA, Hertzig T, Rozanov M, Bayer S, Thiel V, et al. (2004) Major genetic marker of nidoviruses encodes a replicative endoribonuclease. Proc Natl Acad Sci U S A 101: 12694-12699.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 12694-12699
-
-
Ivanov, K.A.1
Hertzig, T.2
Rozanov, M.3
Bayer, S.4
Thiel, V.5
-
69
-
-
66149091584
-
Biochemical Characterization of Arterivirus Nonstructural Protein 11 Reveals the Nidovirus-Wide Conservation of a Replicative Endoribonuclease
-
Nedialkova DD, Ulferts R, van den Born E, Lauber C, Gorbalenya AE, et al. (2009) Biochemical Characterization of Arterivirus Nonstructural Protein 11 Reveals the Nidovirus-Wide Conservation of a Replicative Endoribonuclease. J Virol 83: 5671-5682.
-
(2009)
J Virol
, vol.83
, pp. 5671-5682
-
-
Nedialkova, D.D.1
Ulferts, R.2
van den Born, E.3
Lauber, C.4
Gorbalenya, A.E.5
-
70
-
-
47749138964
-
Coronavirus nonstructural protein 16 is a cap-0 binding enzyme possessing (nucleoside-2′O)-methyltransferase activity
-
Decroly E, Imbert I, Coutard B, Bouvet ML, Selisko B, et al. (2008) Coronavirus nonstructural protein 16 is a cap-0 binding enzyme possessing (nucleoside-2′O)-methyltransferase activity. J Virol 82: 8071-8084.
-
(2008)
J Virol
, vol.82
, pp. 8071-8084
-
-
Decroly, E.1
Imbert, I.2
Coutard, B.3
Bouvet, M.L.4
Selisko, B.5
-
71
-
-
79958067824
-
Crystal Structure and Functional Analysis of the SARS-Coronavirus RNA Cap 2′-O-Methyltransferase nsp10/nsp16 Complex
-
Decroly E, Debarnot C, Ferron F, Bouvet M, Coutard B, et al. (2011) Crystal Structure and Functional Analysis of the SARS-Coronavirus RNA Cap 2′-O-Methyltransferase nsp10/nsp16 Complex. PLoS Pathog 7: e1002059.
-
(2011)
PLoS Pathog
, vol.7
-
-
Decroly, E.1
Debarnot, C.2
Ferron, F.3
Bouvet, M.4
Coutard, B.5
-
72
-
-
26444559529
-
ADP-ribose-1″-monophosphatase: a conserved coronavirus enzyme that is dispensable for viral replication in tissue culture
-
Putics A, Filipowicz W, Hall J, Gorbalenya AE, Ziebuhr J, (2005) ADP-ribose-1″-monophosphatase: a conserved coronavirus enzyme that is dispensable for viral replication in tissue culture. J Virol 79: 12721-12731.
-
(2005)
J Virol
, vol.79
, pp. 12721-12731
-
-
Putics, A.1
Filipowicz, W.2
Hall, J.3
Gorbalenya, A.E.4
Ziebuhr, J.5
-
73
-
-
27644505258
-
Structural basis of severe acute respiratory syndrome coronavirus ADP-ribose-1″-phosphate dephosphorylation by a conserved domain of nsP3
-
Saikatendu KS, Joseph JS, Subramanian V, Clayton T, Griffith M, et al. (2005) Structural basis of severe acute respiratory syndrome coronavirus ADP-ribose-1″-phosphate dephosphorylation by a conserved domain of nsP3. Structure 13: 1665-1675.
-
(2005)
Structure
, vol.13
, pp. 1665-1675
-
-
Saikatendu, K.S.1
Joseph, J.S.2
Subramanian, V.3
Clayton, T.4
Griffith, M.5
-
74
-
-
33748665458
-
Structural and functional basis for ADP-ribose and poly(ADP-ribose) binding by viral macro domains
-
Egloff MP, Malet H, Putics A, Heinonen M, Dutartre H, et al. (2006) Structural and functional basis for ADP-ribose and poly(ADP-ribose) binding by viral macro domains. J Virol 80: 8493-8502.
-
(2006)
J Virol
, vol.80
, pp. 8493-8502
-
-
Egloff, M.P.1
Malet, H.2
Putics, A.3
Heinonen, M.4
Dutartre, H.5
-
75
-
-
0029840630
-
A reevaluation of the higher taxonomy of viruses based on RNA polymerases
-
Zanotto PMD, Gibbs MJ, Gould EA, Holmes EC, (1996) A reevaluation of the higher taxonomy of viruses based on RNA polymerases. J Virol 70: 6083-6096.
-
(1996)
J Virol
, vol.70
, pp. 6083-6096
-
-
Zanotto, P.M.D.1
Gibbs, M.J.2
Gould, E.A.3
Holmes, E.C.4
-
76
-
-
40749085180
-
Pacing a small cage: mutation and RNA viruses
-
Belshaw R, Gardner A, Rambaut A, Pybus OG, (2008) Pacing a small cage: mutation and RNA viruses. Trends Ecol Evol 23: 188-193.
-
(2008)
Trends Ecol Evol
, vol.23
, pp. 188-193
-
-
Belshaw, R.1
Gardner, A.2
Rambaut, A.3
Pybus, O.G.4
-
77
-
-
34948894065
-
The evolution of genome compression and genomic novelty in RNA viruses
-
Belshaw R, Pybus OG, Rambaut A, (2007) The evolution of genome compression and genomic novelty in RNA viruses. Genome Res 17: 1496-1504.
-
(2007)
Genome Res
, vol.17
, pp. 1496-1504
-
-
Belshaw, R.1
Pybus, O.G.2
Rambaut, A.3
-
78
-
-
0024462161
-
Viral-Proteins Containing the Purine NTP-Binding Sequence Pattern
-
Gorbalenya AE, Koonin EV, (1989) Viral-Proteins Containing the Purine NTP-Binding Sequence Pattern. Nucl Acids Res 17: 8413-8440.
-
(1989)
Nucl Acids Res
, vol.17
, pp. 8413-8440
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
-
79
-
-
0025739985
-
Putative papain-related thiol proteases of positive-strand RNA viruses - Identification of Rubivirus and Aphthovirus Proteases and Delineation of A Novel Conserved Domain Associated with Proteases of Rubivirus, Alpha- and Coronaviruses
-
Gorbalenya AE, Koonin EV, Lai MMC, (1991) Putative papain-related thiol proteases of positive-strand RNA viruses- Identification of Rubivirus and Aphthovirus Proteases and Delineation of A Novel Conserved Domain Associated with Proteases of Rubivirus, Alpha- and Coronaviruses. FEBS Lett 288: 201-205.
-
(1991)
FEBS Lett
, vol.288
, pp. 201-205
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
Lai, M.M.C.3
-
80
-
-
11144243100
-
A complex zinc finger controls the enzymatic activities of nidovirus helicases
-
Seybert A, Posthuma CC, van Dinten LC, Snijder EJ, Gorbalenya AE, et al. (2005) A complex zinc finger controls the enzymatic activities of nidovirus helicases. J Virol 79: 696-704.
-
(2005)
J Virol
, vol.79
, pp. 696-704
-
-
Seybert, A.1
Posthuma, C.C.2
van Dinten, L.C.3
Snijder, E.J.4
Gorbalenya, A.E.5
-
81
-
-
33750218147
-
A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus
-
Imbert I, Guillemot JC, Bourhis JM, Bussetta C, Coutard B, et al. (2006) A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus. EMBO J 25: 4933-4942.
-
(2006)
EMBO J
, vol.25
, pp. 4933-4942
-
-
Imbert, I.1
Guillemot, J.C.2
Bourhis, J.M.3
Bussetta, C.4
Coutard, B.5
-
82
-
-
33645000761
-
Insights into SARS-CoV transcription and replication from the structure of the nsp7-nsp8 hexadecamer
-
Zhai YJ, Sun F, Li XM, Pang H, Xu XL, et al. (2005) Insights into SARS-CoV transcription and replication from the structure of the nsp7-nsp8 hexadecamer. Nat Struct Mol Biol 12: 980-986.
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 980-986
-
-
Zhai, Y.J.1
Sun, F.2
Li, X.M.3
Pang, H.4
Xu, X.L.5
-
83
-
-
4444246734
-
Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins
-
Prentice E, McAuliffe J, Lu XT, Subbarao K, Denison MR, (2004) Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins. J Virol 78: 9977-9986.
-
(2004)
J Virol
, vol.78
, pp. 9977-9986
-
-
Prentice, E.1
McAuliffe, J.2
Lu, X.T.3
Subbarao, K.4
Denison, M.R.5
-
84
-
-
53249097514
-
Genome-Wide Analysis of Protein-Protein Interactions and Involvement of Viral Proteins in SARS-CoV Replication
-
Pan JA, Peng XX, Gao YJ, Li ZL, Lu XL, et al. (2008) Genome-Wide Analysis of Protein-Protein Interactions and Involvement of Viral Proteins in SARS-CoV Replication. PLoS One 3: e3299.
-
(2008)
PLoS One
, vol.3
-
-
Pan, J.A.1
Peng, X.X.2
Gao, Y.J.3
Li, Z.L.4
Lu, X.L.5
-
85
-
-
41249103580
-
The SARS-coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein
-
Imbert I, Snijder EJ, Dimitrova M, Guillemot JC, Lecine P, et al. (2008) The SARS-coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein. Virus Res 133: 136-148.
-
(2008)
Virus Res
, vol.133
, pp. 136-148
-
-
Imbert, I.1
Snijder, E.J.2
Dimitrova, M.3
Guillemot, J.C.4
Lecine, P.5
-
86
-
-
77649247357
-
Arterivirus Nsp1 Modulates the Accumulation of Minus-Strand Templates to Control the Relative Abundance of Viral mRNAs
-
Nedialkova DD, Gorbalenya AE, Snijder EJ, (2010) Arterivirus Nsp1 Modulates the Accumulation of Minus-Strand Templates to Control the Relative Abundance of Viral mRNAs. PLoS Pathog 6: e100772.
-
(2010)
PLoS Pathog
, vol.6
-
-
Nedialkova, D.D.1
Gorbalenya, A.E.2
Snijder, E.J.3
-
87
-
-
34648833261
-
Arterivirus subgenomic rnRNA synthesis and virion biogenesis depend on the multifunctional nsp1 autoprotease
-
Tijms MA, Nedialkova DD, Zevenhoven-Dobbe JC, Gorbalenya AE, Snijder EJ, (2007) Arterivirus subgenomic rnRNA synthesis and virion biogenesis depend on the multifunctional nsp1 autoprotease. J Virol 81: 10496-10505.
-
(2007)
J Virol
, vol.81
, pp. 10496-10505
-
-
Tijms, M.A.1
Nedialkova, D.D.2
Zevenhoven-Dobbe, J.C.3
Gorbalenya, A.E.4
Snijder, E.J.5
-
88
-
-
77954053731
-
In Vitro Reconstitution of SARS-Coronavirus mRNA Cap Methylation
-
Bouvet M, Debarnot C, Imbert I, Selisko B, Snijder EJ, et al. (2010) In Vitro Reconstitution of SARS-Coronavirus mRNA Cap Methylation. PLoS Pathog 6: e1000863.
-
(2010)
PLoS Pathog
, vol.6
-
-
Bouvet, M.1
Debarnot, C.2
Imbert, I.3
Selisko, B.4
Snijder, E.J.5
-
89
-
-
80055066817
-
Biochemical and Structural Insights into the Mechanisms of SARS Coronavirus RNA Ribose 2′-O-Methylation by nsp16/nsp10 Protein Complex
-
Chen Y, Su CY, Ke M, Jin X, Xu LR, et al. (2011) Biochemical and Structural Insights into the Mechanisms of SARS Coronavirus RNA Ribose 2′-O-Methylation by nsp16/nsp10 Protein Complex. PLoS Pathog 7: e1002294.
-
(2011)
PLoS Pathog
, vol.7
-
-
Chen, Y.1
Su, C.Y.2
Ke, M.3
Jin, X.4
Xu, L.R.5
-
90
-
-
33751235599
-
Electrostatic origin of the genome packing in viruses
-
Belyi VA, Muthukumar M, (2006) Electrostatic origin of the genome packing in viruses. Proc Natl Acad Sci U S A 103: 17174-17178.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 17174-17178
-
-
Belyi, V.A.1
Muthukumar, M.2
-
91
-
-
42449112829
-
Biophysics of viral infectivity: matching genome length with capsid size
-
Nurmemmedov E, Castelnovo M, Catalano CE, Evilevitch A, (2007) Biophysics of viral infectivity: matching genome length with capsid size. Q Rev Biophys 40: 327-356.
-
(2007)
Q Rev Biophys
, vol.40
, pp. 327-356
-
-
Nurmemmedov, E.1
Castelnovo, M.2
Catalano, C.E.3
Evilevitch, A.4
-
92
-
-
56349116764
-
OPINION Virus evolution: how far does the double beta-barrel viral lineage extend?
-
Krupovic M, Bamford DH, (2008) OPINION Virus evolution: how far does the double beta-barrel viral lineage extend? Nat Rev Microbiol 6: 941-948.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 941-948
-
-
Krupovic, M.1
Bamford, D.H.2
-
93
-
-
58849093248
-
Size Regulation of ss-RNA Viruses
-
Zandi R, van der Schoot P, (2009) Size Regulation of ss-RNA Viruses. Biophys J 96: 9-20.
-
(2009)
Biophys J
, vol.96
, pp. 9-20
-
-
Zandi, R.1
van der Schoot, P.2
-
95
-
-
78650074159
-
Alphacoronavirus Transmissible Gastroenteritis Virus nsp1 Protein Suppresses Protein Translation in Mammalian Cells and in Cell-Free HeLa Cell Extracts but Not in Rabbit Reticulocyte Lysate
-
Huang C, Lokugamage KG, Rozovics JM, Narayanan K, Semler BL, et al. (2011) Alphacoronavirus Transmissible Gastroenteritis Virus nsp1 Protein Suppresses Protein Translation in Mammalian Cells and in Cell-Free HeLa Cell Extracts but Not in Rabbit Reticulocyte Lysate. J Virol 85: 638-643.
-
(2011)
J Virol
, vol.85
, pp. 638-643
-
-
Huang, C.1
Lokugamage, K.G.2
Rozovics, J.M.3
Narayanan, K.4
Semler, B.L.5
-
96
-
-
33748046163
-
Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation
-
Kamitani W, Narayanan K, Huang C, Lokugamage K, Ikegami T, et al. (2006) Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation. Proc Natl Acad Sci U S A 103: 12885-12890.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 12885-12890
-
-
Kamitani, W.1
Narayanan, K.2
Huang, C.3
Lokugamage, K.4
Ikegami, T.5
-
97
-
-
43949136115
-
Proteornics analysis unravels the functional repertoire of coronavirus nonstructural protein 3
-
Neuman BW, Joseph JS, Saikatendu KS, Serrano P, Chatterjee A, et al. (2008) Proteornics analysis unravels the functional repertoire of coronavirus nonstructural protein 3. J Virol 82: 5279-5294.
-
(2008)
J Virol
, vol.82
, pp. 5279-5294
-
-
Neuman, B.W.1
Joseph, J.S.2
Saikatendu, K.S.3
Serrano, P.4
Chatterjee, A.5
-
98
-
-
0035852649
-
A zinc finger-containing papain-like protease couples subgenomic mRNA synthesis to genome translation in a positive-stranded RNA virus
-
Tijms MA, van Dinten LC, Gorbalenya AE, Snijder EJ, (2001) A zinc finger-containing papain-like protease couples subgenomic mRNA synthesis to genome translation in a positive-stranded RNA virus. Proc Natl Acad Sci U S A 98: 1889-94.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 1889-1894
-
-
Tijms, M.A.1
van Dinten, L.C.2
Gorbalenya, A.E.3
Snijder, E.J.4
-
99
-
-
0033591345
-
A human RNA viral cysteine proteinase that depends upon a unique Zn2+-binding finger connecting the two domains of a papain-like fold [published erratum appears in J Biol Chem 1999 Jul 23;274(30):21490]
-
Herold J, Siddell SG, Gorbalenya AE, (1999) A human RNA viral cysteine proteinase that depends upon a unique Zn2+-binding finger connecting the two domains of a papain-like fold [published erratum appears in J Biol Chem 1999 Jul 23;274(30):21490]. J Biol Chem 274: 14918-14925.
-
(1999)
J Biol Chem
, vol.274
, pp. 14918-14925
-
-
Herold, J.1
Siddell, S.G.2
Gorbalenya, A.E.3
-
100
-
-
0141889936
-
Isolation and characterization of viruses related to the SARS coronavirus from animals in Southern China
-
Guan Y, Zheng BJ, He YQ, Liu XL, Zhuang ZX, et al. (2003) Isolation and characterization of viruses related to the SARS coronavirus from animals in Southern China. Science 302: 276-278.
-
(2003)
Science
, vol.302
, pp. 276-278
-
-
Guan, Y.1
Zheng, B.J.2
He, Y.Q.3
Liu, X.L.4
Zhuang, Z.X.5
-
101
-
-
76249091386
-
Feline infectious peritonitis: insights into feline coronavirus pathobiogenesis and epidemiology based on genetic analysis of the viral 3c gene
-
Chang HW, de Groot RJ, Egberink HF, Rottier PJM, (2010) Feline infectious peritonitis: insights into feline coronavirus pathobiogenesis and epidemiology based on genetic analysis of the viral 3c gene. J Gen Virol 91: 415-420.
-
(2010)
J Gen Virol
, vol.91
, pp. 415-420
-
-
Chang, H.W.1
de Groot, R.J.2
Egberink, H.F.3
Rottier, P.J.M.4
-
102
-
-
53749084416
-
Gain, Preservation, and Loss of a Group 1a Coronavirus Accessory Glycoprotein
-
Lorusso A, Decaro N, Schellen P, Rottier PJM, Buonavoglia C, et al. (2008) Gain, Preservation, and Loss of a Group 1a Coronavirus Accessory Glycoprotein. J Virol 82: 10312-10317.
-
(2008)
J Virol
, vol.82
, pp. 10312-10317
-
-
Lorusso, A.1
Decaro, N.2
Schellen, P.3
Rottier, P.J.M.4
Buonavoglia, C.5
-
103
-
-
54249170223
-
Genomics and Evolution of the Nidovirales
-
In: Perlman S, Gallagher T, Snijder EJ, editors, Washington: ASM Press
-
Gorbalenya AE (2008) Genomics and Evolution of the Nidovirales. In: Perlman S, Gallagher T, Snijder EJ, editors. Nidoviruses. Washington: ASM Press. pp. 15-28.
-
(2008)
Nidoviruses
, pp. 15-28
-
-
Gorbalenya, A.E.1
-
104
-
-
38349178145
-
Virus Evolution
-
In: Knipe DM, Howley PM, Griffin DE, Lamb RA, Martin MA, et al., editors, Philadelphia: Wolters Kluwer, Lippincott Williams & Wilkins
-
Domingo E (2007) Virus Evolution. In: Knipe DM, Howley PM, Griffin DE, Lamb RA, Martin MA, et al., editors. Fields Virology. Philadelphia: Wolters Kluwer, Lippincott Williams & Wilkins. pp. 389-421.
-
(2007)
Fields Virology
, pp. 389-421
-
-
Domingo, E.1
-
105
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
106
-
-
0035031966
-
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
-
Whelan S, Goldman N, (2001) A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol 18: 691-699.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 691-699
-
-
Whelan, S.1
Goldman, N.2
-
107
-
-
33344465800
-
Relaxed phylogenetics and dating with confidence
-
Drummond AJ, Ho SYW, Phillips MJ, Rambaut A, (2006) Relaxed phylogenetics and dating with confidence. PLoS Biol 4: 699-710.
-
(2006)
PLoS Biol
, vol.4
, pp. 699-710
-
-
Drummond, A.J.1
Ho, S.Y.W.2
Phillips, M.J.3
Rambaut, A.4
-
108
-
-
34547803197
-
PAML 4: Phylogenetic analysis by maximum likelihood
-
Yang ZH, (2007) PAML 4: Phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586-1591.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1586-1591
-
-
Yang, Z.H.1
-
109
-
-
0022203256
-
Phylogenies and the Comparative Method
-
Felsenstein J, (1985) Phylogenies and the Comparative Method. American Naturalist 125: 1-15.
-
(1985)
American Naturalist
, vol.125
, pp. 1-15
-
-
Felsenstein, J.1
-
110
-
-
0028043552
-
Position-based sequence weights
-
Henikoff S, Henikoff JG, (1994) Position-based sequence weights. J Mol Biol 243: 574-578.
-
(1994)
J Mol Biol
, vol.243
, pp. 574-578
-
-
Henikoff, S.1
Henikoff, J.G.2
-
111
-
-
84972507631
-
Monotone Regression Splines in Action
-
Ramsay JO, (1988) Monotone Regression Splines in Action. Statistical Science 3: 425-441.
-
(1988)
Statistical Science
, vol.3
, pp. 425-441
-
-
Ramsay, J.O.1
-
112
-
-
0030367481
-
Nonparametric selection of regressors: The nonnested case
-
Lavergne P, Vuong QH, (1996) Nonparametric selection of regressors: The nonnested case. Econometrica 64: 207-219.
-
(1996)
Econometrica
, vol.64
, pp. 207-219
-
-
Lavergne, P.1
Vuong, Q.H.2
-
114
-
-
0034105481
-
The predicted metal-binding region of the arterivirus helicase protein is involved in subgenomic mRNA synthesis, genome replication, and virion biogenesis
-
van Dinten LC, van Tol H, Gorbalenya AE, Snijder EJ, (2000) The predicted metal-binding region of the arterivirus helicase protein is involved in subgenomic mRNA synthesis, genome replication, and virion biogenesis. J Virol 74: 5213-5223.
-
(2000)
J Virol
, vol.74
, pp. 5213-5223
-
-
van Dinten, L.C.1
van Tol, H.2
Gorbalenya, A.E.3
Snijder, E.J.4
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