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Volumn 27, Issue 16, 2013, Pages 1787-1799

Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape

Author keywords

Chromatin; Gene expression; Lamin B1; Senescence

Indexed keywords

DNA; HISTONE H3; IMMUNOGLOBULIN G; LAMIN; LAMIN B1; MUTANT PROTEIN; PUROMYCIN; SHORT HAIRPIN RNA; UNCLASSIFIED DRUG;

EID: 84882682843     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.223834.113     Document Type: Article
Times cited : (414)

References (60)
  • 2
    • 70349773104 scopus 로고    scopus 로고
    • Healing and hurting: Molecular mechanisms, functions, and pathologies of cellular senescence
    • Adams PD. 2009. Healing and hurting: Molecular mechanisms, functions, and pathologies of cellular senescence. Mol Cell 36: 2-14.
    • (2009) Mol Cell , vol.36 , pp. 2-14
    • Adams, P.D.1
  • 4
    • 84857995837 scopus 로고    scopus 로고
    • Oxidative stress induces an ATM-independent senescence pathway through p38 MAPK-mediated lamin B1 accumulation
    • Barascu A., Le Chalony C, Pennarun G, Genet D, Imam N, Lopez B, Bertrand P. 2012. Oxidative stress induces an ATM-independent senescence pathway through p38 MAPK-mediated lamin B1 accumulation. EMBO J 31: 1080-1094.
    • (2012) EMBO J , vol.31 , pp. 1080-1094
    • Barascu, A.1    Le Chalony, C.2    Pennarun, G.3    Genet, D.4    Imam, N.5    Lopez, B.6    Bertrand, P.7
  • 9
    • 13944270339 scopus 로고    scopus 로고
    • Senescent cells, tumor suppression, and organismal aging: Good citizens, bad neighbors
    • Campisi J. 2005. Senescent cells, tumor suppression, and organismal aging: Good citizens, bad neighbors. Cell 120: 513-522.
    • (2005) Cell , vol.120 , pp. 513-522
    • Campisi, J.1
  • 12
    • 84891713034 scopus 로고    scopus 로고
    • Senescence-associated secretory phenotypes reveal cell-nonautonomous functions of oncogenic RAS and the p53 tumor suppressor
    • Coppe J.P., Patil CK, Rodier F, Sun Y, Munoz DP, Goldstein J, Nelson P.S., Desprez PY, Campisi J. 2008. Senescence-associated secretory phenotypes reveal cell-nonautonomous functions of oncogenic RAS and the p53 tumor suppressor. PLoS Biol 6: 2853-2868.
    • (2008) PLoS Biol , vol.6 , pp. 2853-2868
    • Coppe, J.P.1    Patil, C.K.2    Rodier, F.3    Sun, Y.4    Munoz, D.P.5    Goldstein, J.6    Nelson, P.S.7    Desprez, P.Y.8    Campisi, J.9
  • 13
    • 34247860915 scopus 로고    scopus 로고
    • Telomere dysfunction suppresses spontaneous tumorigenesis in vivo by initiating p53-dependent cellular senescence
    • Cosme-Blanco W, Shen MF, Lazar AJ, Pathak S, Lozano G, Multani A.S., Chang S. 2007. Telomere dysfunction suppresses spontaneous tumorigenesis in vivo by initiating p53-dependent cellular senescence. EMBO Rep 8: 497-503.
    • (2007) EMBO Rep , vol.8 , pp. 497-503
    • Cosme-Blanco, W.1    Shen, M.F.2    Lazar, A.J.3    Pathak, S.4    Lozano, G.5    Multani, A.S.6    Chang, S.7
  • 16
    • 34247581288 scopus 로고    scopus 로고
    • Short telomeres limit tumor progression in vivo by inducing senescence
    • Feldser D.M., Greider CW. 2007. Short telomeres limit tumor progression in vivo by inducing senescence. Cancer Cell 11: 461-469.
    • (2007) Cancer Cell , vol.11 , pp. 461-469
    • Feldser, D.M.1    Greider, C.W.2
  • 20
    • 33845687060 scopus 로고    scopus 로고
    • Loss of linker histone H1 in cellular senescence
    • Funayama R., Saito M, Tanobe H, Ishikawa F. 2006. Loss of linker histone H1 in cellular senescence. J Cell Biol 175: 869-880.
    • (2006) J Cell Biol , vol.175 , pp. 869-880
    • Funayama, R.1    Saito, M.2    Tanobe, H.3    Ishikawa, F.4
  • 24
    • 34447098370 scopus 로고    scopus 로고
    • A chromatin landmark and transcription initiation at most promoters in human cells
    • Guenther M.G., Levine SS, Boyer LA, Jaenisch R, Young RA. 2007. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130: 77-88.
    • (2007) Cell , vol.130 , pp. 77-88
    • Guenther, M.G.1    Levine, S.S.2    Boyer, L.A.3    Jaenisch, R.4    Young, R.A.5
  • 26
    • 0033214237 scopus 로고    scopus 로고
    • The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms
    • KaeberleinM, McVey M, Guarente L. 1999. The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms. Genes Dev 13: 2570-2580.
    • (1999) Genes Dev , vol.13 , pp. 2570-2580
    • Kaeberlein, M.1    McVey, M.2    Guarente, L.3
  • 31
    • 0035834121 scopus 로고    scopus 로고
    • Senescent fibroblasts promote epithelial cell growth and tumorigenesis: A link between cancer and aging
    • Krtolica A., Parrinello S, Lockett S, Desprez PY, Campisi J. 2001. Senescent fibroblasts promote epithelial cell growth and tumorigenesis: A link between cancer and aging. Proc Natl Acad Sci 98: 12072-12077.
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 12072-12077
    • Krtolica, A.1    Parrinello, S.2    Lockett, S.3    Desprez, P.Y.4    Campisi, J.5
  • 34
    • 33845925394 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation and microarray-based analysis of protein location
    • Lee T.I., Johnstone SE, Young RA. 2006b. Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat Protoc 1: 729-748.
    • (2006) Nat Protoc , vol.1 , pp. 729-748
    • Lee, T.I.1    Johnstone, S.E.2    Young, R.A.3
  • 35
    • 0242383489 scopus 로고    scopus 로고
    • Dynamic interactions of nuclear lamina proteins with chromatin and transcriptional machinery
    • Mattout-Drubezki A, Gruenbaum Y. 2003. Dynamic interactions of nuclear lamina proteins with chromatin and transcriptional machinery. Cell Mol Life Sci 60: 2053-2063.
    • (2003) Cell Mol Life Sci , vol.60 , pp. 2053-2063
    • Mattout-Drubezki, A.1    Gruenbaum, Y.2
  • 36
    • 84873349707 scopus 로고    scopus 로고
    • Correlated alterations in genome organization, histone methylation, and DNA-lamin A/C interactions in Hutchinson-Gilford progeria syndrome
    • McCord RP, Nazario-Toole A, Zhang H, Chines PS, Zhan Y, Erdos M.R., Collins FS, Dekker J, Cao K. 2013. Correlated alterations in genome organization, histone methylation, and DNA-lamin A/C interactions in Hutchinson-Gilford progeria syndrome. Genome Res 23: 260-269.
    • (2013) Genome Res , vol.23 , pp. 260-269
    • McCord, R.P.1    Nazario-Toole, A.2    Zhang, H.3    Chines, P.S.4    Zhan, Y.5    Erdos, M.R.6    Collins, F.S.7    Dekker, J.8    Cao, K.9
  • 38
    • 33746752125 scopus 로고    scopus 로고
    • A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation
    • Narita M., Krizhanovsky V, Nunez S, Chicas A, Hearn SA, Myers MP, Lowe SW. 2006. A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation. Cell 126: 503-514.
    • (2006) Cell , vol.126 , pp. 503-514
    • Narita, M.1    Krizhanovsky, V.2    Nunez, S.3    Chicas, A.4    Hearn, S.A.5    Myers, M.P.6    Lowe, S.W.7
  • 39
    • 77957814604 scopus 로고    scopus 로고
    • Reduced histone biosynthesis and chromatin changes arising from a damage signal at telomeres
    • O'Sullivan RJ, Kubicek S, Schreiber SL, Karlseder J. 2010. Reduced histone biosynthesis and chromatin changes arising from a damage signal at telomeres. Nat Struct Mol Biol 17: 1218-1225.
    • (2010) Nat Struct Mol Biol , vol.17 , pp. 1218-1225
    • O'Sullivan, R.J.1    Kubicek, S.2    Schreiber, S.L.3    Karlseder, J.4
  • 42
    • 40749122641 scopus 로고    scopus 로고
    • Transcriptional repression mediated by repositioning of genes to the nuclear lamina
    • Reddy K.L., Zullo JM, Bertolino E, Singh H. 2008. Transcriptional repression mediated by repositioning of genes to the nuclear lamina. Nature 452: 243-247.
    • (2008) Nature , vol.452 , pp. 243-247
    • Reddy, K.L.1    Zullo, J.M.2    Bertolino, E.3    Singh, H.4
  • 43
    • 33750488431 scopus 로고    scopus 로고
    • The genomic landscape of histone modifications in human T cells
    • Roh T.Y., Cuddapah S, Cui K, Zhao K. 2006. The genomic landscape of histone modifications in human T cells. Proc Natl Acad Sci 103: 15782-15787.
    • (2006) Proc Natl Acad Sci , vol.103 , pp. 15782-15787
    • Roh, T.Y.1    Cuddapah, S.2    Cui, K.3    Zhao, K.4
  • 44
    • 84876134219 scopus 로고    scopus 로고
    • Granule exocytosis mediates immune surveillance of senescent cells
    • Sagiv A., Biran A, Yon M, Simon J, Lowe SW, Krizhanovsky V. 2013. Granule exocytosis mediates immune surveillance of senescent cells. Oncogene 32: 1971-1977.
    • (2013) Oncogene , vol.32 , pp. 1971-1977
    • Sagiv, A.1    Biran, A.2    Yon, M.3    Simon, J.4    Lowe, S.W.5    Krizhanovsky, V.6
  • 45
    • 17644373758 scopus 로고    scopus 로고
    • Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome
    • Scaffidi P., Misteli T. 2005. Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome. Nat Med 11: 440-445.
    • (2005) Nat Med , vol.11 , pp. 440-445
    • Scaffidi, P.1    Misteli, T.2
  • 47
    • 84865248380 scopus 로고    scopus 로고
    • Chromatin organization is a major influence on regional mutation rates in human cancer cells
    • Schuster-Bockler B, Lehner B. 2012. Chromatin organization is a major influence on regional mutation rates in human cancer cells. Nature 488: 504-507.
    • (2012) Nature , vol.488 , pp. 504-507
    • Schuster-Bockler, B.1    Lehner, B.2
  • 51
    • 84861870951 scopus 로고    scopus 로고
    • The COMPASS family of histone H3K4 methylases: Mechanisms of regulation in development and disease pathogenesis
    • Shilatifard A. 2012. The COMPASS family of histone H3K4 methylases: Mechanisms of regulation in development and disease pathogenesis. Annu Rev Biochem 81: 65-95.
    • (2012) Annu Rev Biochem , vol.81 , pp. 65-95
    • Shilatifard, A.1
  • 55
    • 80052411398 scopus 로고    scopus 로고
    • Repetitive transgenes in C. elegans accumulate heterochromatic marks and are sequestered at the nuclear envelope in a copy-numberand lamin-dependent manner
    • Towbin B.D., Meister P, Pike BL, Gasser SM. 2010. Repetitive transgenes in C. elegans accumulate heterochromatic marks and are sequestered at the nuclear envelope in a copy-numberand lamin-dependent manner. Cold Spring Harb Symp Quant Biol 75: 555-565.
    • (2010) Cold Spring Harb Symp Quant Biol , vol.75 , pp. 555-565
    • Towbin, B.D.1    Meister, P.2    Pike, B.L.3    Gasser, S.M.4
  • 59
    • 0037452888 scopus 로고    scopus 로고
    • Senescence-specific gene expression fingerprints reveal cell-type-dependent physical clustering of up-regulated chromosomal loci
    • Zhang H., Pan KH, Cohen SN. 2003. Senescence-specific gene expression fingerprints reveal cell-type-dependent physical clustering of up-regulated chromosomal loci. Proc Natl Acad Sci 100: 3251-3256.
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 3251-3256
    • Zhang, H.1    Pan, K.H.2    Cohen, S.N.3
  • 60
    • 33947236204 scopus 로고    scopus 로고
    • Molecular dissection of formation of senescence-associated heterochromatin foci
    • Zhang R., Chen W, Adams PD. 2007. Molecular dissection of formation of senescence-associated heterochromatin foci. Mol Cell Biol 27: 2343-2358.
    • (2007) Mol Cell Biol , vol.27 , pp. 2343-2358
    • Zhang, R.1    Chen, W.2    Adams, P.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.