메뉴 건너뛰기




Volumn 41, Issue 2, 2013, Pages 295-305

Identification and characterization of TLR7, TLR8a2, TLR8b1 and TLR8b2 genes in Atlantic salmon (Salmo salar)

Author keywords

Atlantic salmon; Gene expression; Innate immunity; TLR7; TLR8; Toll like receptor

Indexed keywords

AMINO ACID; CCAAT ENHANCER BINDING PROTEIN; CYTOKINE; DNA; GAMMA INTERFERON; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; INTERFERON; INTERFERON REGULATORY FACTOR; INTERLEUKIN 1BETA; STAT PROTEIN; TOLL LIKE RECEPTOR 7; TOLL LIKE RECEPTOR 8; TRANSCRIPTION FACTOR;

EID: 84880843220     PISSN: 0145305X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dci.2013.05.013     Document Type: Article
Times cited : (52)

References (58)
  • 1
    • 32944464648 scopus 로고    scopus 로고
    • Pathogen recognition and innate immunity
    • Akira S., Uematsu S., Takeuchi O. Pathogen recognition and innate immunity. Cell 2006, 124:783-801.
    • (2006) Cell , vol.124 , pp. 783-801
    • Akira, S.1    Uematsu, S.2    Takeuchi, O.3
  • 2
    • 0035909372 scopus 로고    scopus 로고
    • Recognition of double-stranded RNA and activation of NF-kB by toll-like receptor 3
    • Alexopoulou L., Holt A.C., Medzhitov R., Flavell R.A. Recognition of double-stranded RNA and activation of NF-kB by toll-like receptor 3. Nature 2001, 413:732-738.
    • (2001) Nature , vol.413 , pp. 732-738
    • Alexopoulou, L.1    Holt, A.C.2    Medzhitov, R.3    Flavell, R.A.4
  • 4
    • 77949940198 scopus 로고    scopus 로고
    • Intracellular toll-like receptors
    • Blasius A.L., Beutler B. Intracellular toll-like receptors. Immunity 2010, 32:305-315.
    • (2010) Immunity , vol.32 , pp. 305-315
    • Blasius, A.L.1    Beutler, B.2
  • 5
    • 69849087745 scopus 로고    scopus 로고
    • Selection of reference genes for expression studies with fish myogenic cell cultures
    • Bower N.I., Johnston I.A. Selection of reference genes for expression studies with fish myogenic cell cultures. BMC Mol. Biol. 2009, 10:80.
    • (2009) BMC Mol. Biol. , vol.10 , pp. 80
    • Bower, N.I.1    Johnston, I.A.2
  • 6
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • Burge C., Karlin S. Prediction of complete gene structures in human genomic DNA. J. Mol. Biol. 1997, 268:78-94.
    • (1997) J. Mol. Biol. , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 8
    • 0034457684 scopus 로고    scopus 로고
    • Cloning and characterization of a sub-family of human toll-like receptors: hTLR7, hTLR8 and hTLR9
    • Chuang T.H., Ulevitch R.J. Cloning and characterization of a sub-family of human toll-like receptors: hTLR7, hTLR8 and hTLR9. Eur. Cytokine Netw. 2000, 11:372-378.
    • (2000) Eur. Cytokine Netw. , vol.11 , pp. 372-378
    • Chuang, T.H.1    Ulevitch, R.J.2
  • 9
    • 0029021087 scopus 로고
    • Isolation of the causal virus of infectious salmon anaemia (ISA) in a long-term cell line from Atlantic salmon head kidney
    • Dannevig B.H., Falk K., Namork E. Isolation of the causal virus of infectious salmon anaemia (ISA) in a long-term cell line from Atlantic salmon head kidney. J. Gen. Virol. 1995, 76:1353-1359.
    • (1995) J. Gen. Virol. , vol.76 , pp. 1353-1359
    • Dannevig, B.H.1    Falk, K.2    Namork, E.3
  • 10
    • 1542317550 scopus 로고    scopus 로고
    • Innate antiviral responses by means of TLR7-mediated recognition of single-stranded RNA
    • Diebold S.S., Kaisho T., Hemmi H., Akira S., Reis e Sousa C. Innate antiviral responses by means of TLR7-mediated recognition of single-stranded RNA. Science 2004, 303:1529-1531.
    • (2004) Science , vol.303 , pp. 1529-1531
    • Diebold, S.S.1    Kaisho, T.2    Hemmi, H.3    Akira, S.4    Reis e Sousa, C.5
  • 13
    • 68649114506 scopus 로고    scopus 로고
    • The effect of sub-culturing on the basal level of type I interferon (IFN) gene expression in the salmon head kidney (SHK-1) cell line
    • Fourrier M.C., Arnold M.F., Collet B., Munro E.S. The effect of sub-culturing on the basal level of type I interferon (IFN) gene expression in the salmon head kidney (SHK-1) cell line. Fish Shellfish Immunol. 2009, 27:535-538.
    • (2009) Fish Shellfish Immunol. , vol.27 , pp. 535-538
    • Fourrier, M.C.1    Arnold, M.F.2    Collet, B.3    Munro, E.S.4
  • 15
    • 33748065439 scopus 로고    scopus 로고
    • Conserved features in the extracellular domain of human toll-like receptor 8 are essential for pH-dependent signaling
    • Gibbard R.J., Morley P.J., Gay N.J. Conserved features in the extracellular domain of human toll-like receptor 8 are essential for pH-dependent signaling. J. Biol. Chem. 2006, 281:27503-27511.
    • (2006) J. Biol. Chem. , vol.281 , pp. 27503-27511
    • Gibbard, R.J.1    Morley, P.J.2    Gay, N.J.3
  • 17
    • 33750823681 scopus 로고    scopus 로고
    • Cutting edge: activation of murine TLR8 by a combination of imidazoquinoline immune response modifiers and polyT oligodeoxynucleotides
    • Gorden K.K., Qiu X.X., Binsfeld C.C., Vasilakos J.P., Alkan S.S. Cutting edge: activation of murine TLR8 by a combination of imidazoquinoline immune response modifiers and polyT oligodeoxynucleotides. J. Immunol. 2006, 177:6584-6587.
    • (2006) J. Immunol. , vol.177 , pp. 6584-6587
    • Gorden, K.K.1    Qiu, X.X.2    Binsfeld, C.C.3    Vasilakos, J.P.4    Alkan, S.S.5
  • 22
    • 0037322295 scopus 로고    scopus 로고
    • Toll signaling: the TIReless quest for specificity
    • Imler J.L., Hoffmann J.A. Toll signaling: the TIReless quest for specificity. Nat. Immunol. 2003, 4:105-106.
    • (2003) Nat. Immunol. , vol.4 , pp. 105-106
    • Imler, J.L.1    Hoffmann, J.A.2
  • 24
    • 0346849669 scopus 로고    scopus 로고
    • Toll-like receptor gene family and TIR-domain adapters in Danio rerio
    • Jault C., Pichon L., Chluba J. Toll-like receptor gene family and TIR-domain adapters in Danio rerio. Mol. Immunol. 2004, 40:759-771.
    • (2004) Mol. Immunol. , vol.40 , pp. 759-771
    • Jault, C.1    Pichon, L.2    Chluba, J.3
  • 25
    • 34248167108 scopus 로고    scopus 로고
    • Infectious salmon anemia virus is a powerful inducer of key genes of the type I interferon system of Atlantic salmon, but is not inhibited by interferon
    • Kileng Ø., Brundtland M.I., Robertsen B. Infectious salmon anemia virus is a powerful inducer of key genes of the type I interferon system of Atlantic salmon, but is not inhibited by interferon. Fish Shellfish Immunol. 2007, 23:378-389.
    • (2007) Fish Shellfish Immunol. , vol.23 , pp. 378-389
    • Kileng, Ø.1    Brundtland, M.I.2    Robertsen, B.3
  • 26
    • 77951185262 scopus 로고    scopus 로고
    • Genomics and the genome duplication in salmonids
    • 5th World Fisheries Congress
    • Koop, B.F., Davidson, W.S., 2008. Genomics and the genome duplication in salmonids. 5th World Fisheries Congress, 77-86.
    • (2008) , pp. 77-86
    • Koop, B.F.1    Davidson, W.S.2
  • 28
    • 84862221167 scopus 로고    scopus 로고
    • SMART 7: recent updates to the protein domain annotation resource
    • Letunic I., Doerks T., Bork P. SMART 7: recent updates to the protein domain annotation resource. Nucleic Acids Res. 2012, 40:D302-305.
    • (2012) Nucleic Acids Res. , vol.40
    • Letunic, I.1    Doerks, T.2    Bork, P.3
  • 29
    • 74449089424 scopus 로고    scopus 로고
    • A five-amino-acid motif in the undefined region of the TLR8 ectodomain is required for species-specific ligand recognition
    • Liu J., Xu C., Hsu L.C., Luo Y., Xiang R., Chuang T.H. A five-amino-acid motif in the undefined region of the TLR8 ectodomain is required for species-specific ligand recognition. Mol. Immunol. 2010, 47:1083-1090.
    • (2010) Mol. Immunol. , vol.47 , pp. 1083-1090
    • Liu, J.1    Xu, C.2    Hsu, L.C.3    Luo, Y.4    Xiang, R.5    Chuang, T.H.6
  • 31
    • 34447539555 scopus 로고    scopus 로고
    • Directional responses following recombinant cytokine stimulation of rainbow trout (Oncorhynchus mykiss) RTS-11 macrophage cells as revealed by transcriptome profiling
    • Martin S.A., Zou J., Houlihan D.F., Secombes C.J. Directional responses following recombinant cytokine stimulation of rainbow trout (Oncorhynchus mykiss) RTS-11 macrophage cells as revealed by transcriptome profiling. BMC Genomics 2007, 8:150.
    • (2007) BMC Genomics , vol.8 , pp. 150
    • Martin, S.A.1    Zou, J.2    Houlihan, D.F.3    Secombes, C.J.4
  • 32
    • 34347209992 scopus 로고    scopus 로고
    • Comparative sequence analysis of leucine-rich repeats (LRRs) within vertebrate toll-like receptors
    • Matsushima N., Tanaka T., Enkhbayar P., Mikami T., Taga M., Yamada K., Kuroki Y. Comparative sequence analysis of leucine-rich repeats (LRRs) within vertebrate toll-like receptors. BMC Genomics 2007, 8:124.
    • (2007) BMC Genomics , vol.8 , pp. 124
    • Matsushima, N.1    Tanaka, T.2    Enkhbayar, P.3    Mikami, T.4    Taga, M.5    Yamada, K.6    Kuroki, Y.7
  • 33
    • 34248189991 scopus 로고    scopus 로고
    • Expression kinetics of interferon and interferon-induced genes in Atlantic salmon (Salmo salar) following infection with infectious pancreatic necrosis virus and infectious salmon anaemia virus
    • McBeath A.J., Snow M., Secombes C.J., Ellis A.E., Collet B. Expression kinetics of interferon and interferon-induced genes in Atlantic salmon (Salmo salar) following infection with infectious pancreatic necrosis virus and infectious salmon anaemia virus. Fish Shellfish Immunol. 2007, 22:230-241.
    • (2007) Fish Shellfish Immunol. , vol.22 , pp. 230-241
    • McBeath, A.J.1    Snow, M.2    Secombes, C.J.3    Ellis, A.E.4    Collet, B.5
  • 34
    • 3042609939 scopus 로고    scopus 로고
    • The expanding family of MyD88-like adaptors in toll-like receptor signal transduction
    • McGettrick A.F., O'Neill L.A. The expanding family of MyD88-like adaptors in toll-like receptor signal transduction. Mol. Immunol. 2004, 41:577-582.
    • (2004) Mol. Immunol. , vol.41 , pp. 577-582
    • McGettrick, A.F.1    O'Neill, L.A.2
  • 35
    • 0035524488 scopus 로고    scopus 로고
    • Toll-like receptors and innate immunity
    • Medzhitov R. Toll-like receptors and innate immunity. Nat. Rev. Immunol. 2001, 1:135-145.
    • (2001) Nat. Rev. Immunol. , vol.1 , pp. 135-145
    • Medzhitov, R.1
  • 37
    • 0037303847 scopus 로고    scopus 로고
    • Prediction of the prototype of the human toll-like receptor gene family from the pufferfish, Fugu rubripes, genome
    • Oshiumi H., Tsujita T., Shida K., Matsumoto M., Ikeo K., Seya T. Prediction of the prototype of the human toll-like receptor gene family from the pufferfish, Fugu rubripes, genome. Immunogenetics 2003, 54:791-800.
    • (2003) Immunogenetics , vol.54 , pp. 791-800
    • Oshiumi, H.1    Tsujita, T.2    Shida, K.3    Matsumoto, M.4    Ikeo, K.5    Seya, T.6
  • 38
    • 80455168991 scopus 로고    scopus 로고
    • Toll-like receptors in bony fish: from genomics to function
    • Palti Y. Toll-like receptors in bony fish: from genomics to function. Dev. Comp. Immunol. 2011, 35:1263-1272.
    • (2011) Dev. Comp. Immunol. , vol.35 , pp. 1263-1272
    • Palti, Y.1
  • 39
    • 70450224438 scopus 로고    scopus 로고
    • Identification, characterization and genetic mapping of TLR7, TLR8a1 and TLR8a2 genes in rainbow trout (Oncorhynchus mykiss)
    • Palti Y., Gahr S.A., Purcell M.K., Hadidi S., Rexroad C.E., Wiens G.D. Identification, characterization and genetic mapping of TLR7, TLR8a1 and TLR8a2 genes in rainbow trout (Oncorhynchus mykiss). Dev. Comp. Immunol. 2010, 34:219-233.
    • (2010) Dev. Comp. Immunol. , vol.34 , pp. 219-233
    • Palti, Y.1    Gahr, S.A.2    Purcell, M.K.3    Hadidi, S.4    Rexroad, C.E.5    Wiens, G.D.6
  • 40
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl M.W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 2001, 29:e45.
    • (2001) Nucleic Acids Res. , vol.29
    • Pfaffl, M.W.1
  • 41
    • 0036581160 scopus 로고    scopus 로고
    • Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR
    • Pfaffl M.W., Horgan G.W., Dempfle L. Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res. 2002, 30:e36.
    • (2002) Nucleic Acids Res. , vol.30
    • Pfaffl, M.W.1    Horgan, G.W.2    Dempfle, L.3
  • 42
    • 16644376636 scopus 로고    scopus 로고
    • Identification and characterization of a functional, alternatively spliced toll-like receptor 7 (TLR7) and genomic disruption of TLR8 in chickens
    • Philbin V.J., Iqbal M., Boyd Y., Goodchild M.J., Beal R.K., Bumstead N., Young J., Smith A.L. Identification and characterization of a functional, alternatively spliced toll-like receptor 7 (TLR7) and genomic disruption of TLR8 in chickens. Immunology 2005, 114:507-521.
    • (2005) Immunology , vol.114 , pp. 507-521
    • Philbin, V.J.1    Iqbal, M.2    Boyd, Y.3    Goodchild, M.J.4    Beal, R.K.5    Bumstead, N.6    Young, J.7    Smith, A.L.8
  • 43
    • 34948908604 scopus 로고    scopus 로고
    • The zebrafish genome in context: ohnologs gone missing
    • Postlethwait J.H. The zebrafish genome in context: ohnologs gone missing. J. Exp. Zool. B Mol. Dev. Evol. 2007, 308:563-577.
    • (2007) J. Exp. Zool. B Mol. Dev. Evol. , vol.308 , pp. 563-577
    • Postlethwait, J.H.1
  • 46
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S., Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 2000, 132:365-386.
    • (2000) Methods Mol. Biol. , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 49
    • 33646049347 scopus 로고    scopus 로고
    • Innate sensing of self and non-self RNAs by toll-like receptors
    • Sioud M. Innate sensing of self and non-self RNAs by toll-like receptors. Trends Mol. Med. 2006, 12:167-176.
    • (2006) Trends Mol. Med. , vol.12 , pp. 167-176
    • Sioud, M.1
  • 50
    • 67349121628 scopus 로고    scopus 로고
    • Identification and characterization of TLR8 and MyD88 homologs in Atlantic salmon (Salmo salar)
    • Skjaeveland I., Iliev D.B., Strandskog G., Jorgensen J.B. Identification and characterization of TLR8 and MyD88 homologs in Atlantic salmon (Salmo salar). Dev. Comp. Immunol. 2009, 33:1011-1017.
    • (2009) Dev. Comp. Immunol. , vol.33 , pp. 1011-1017
    • Skjaeveland, I.1    Iliev, D.B.2    Strandskog, G.3    Jorgensen, J.B.4
  • 51
    • 0034681434 scopus 로고    scopus 로고
    • Identification of two major sites in the type I interleukin-1 receptor cytoplasmic region responsible for coupling to pro-inflammatory signaling pathways
    • Slack J.L., Schooley K., Bonnert T.P., Mitcham J.L., Qwarnstrom E.E., Sims J.E., Dower S.K. Identification of two major sites in the type I interleukin-1 receptor cytoplasmic region responsible for coupling to pro-inflammatory signaling pathways. J. Biol. Chem. 2000, 275:4670-4678.
    • (2000) J. Biol. Chem. , vol.275 , pp. 4670-4678
    • Slack, J.L.1    Schooley, K.2    Bonnert, T.P.3    Mitcham, J.L.4    Qwarnstrom, E.E.5    Sims, J.E.6    Dower, S.K.7
  • 53
    • 35748937030 scopus 로고    scopus 로고
    • Recognition of viruses by innate immunity
    • Takeuchi O., Akira S. Recognition of viruses by innate immunity. Immunol. Rev. 2007, 220:214-224.
    • (2007) Immunol. Rev. , vol.220 , pp. 214-224
    • Takeuchi, O.1    Akira, S.2
  • 54
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 55
    • 78649905408 scopus 로고    scopus 로고
    • Cloning, characterization, and expression analysis of Toll-like receptor-7 cDNA from common carp, Cyprinus carpio L
    • Tanekhy M., Kono T., Sakai M. Cloning, characterization, and expression analysis of Toll-like receptor-7 cDNA from common carp, Cyprinus carpio L. Comp. Biochem. Physiol. Part D Genomics Proteomics 2010, 5:245-255.
    • (2010) Comp. Biochem. Physiol. Part D Genomics Proteomics , vol.5 , pp. 245-255
    • Tanekhy, M.1    Kono, T.2    Sakai, M.3
  • 56
    • 15544377813 scopus 로고    scopus 로고
    • Genome evolution and biodiversity in teleost fish
    • Volff J.N. Genome evolution and biodiversity in teleost fish. Heredity (Edinb.) 2005, 94:280-294.
    • (2005) Heredity (Edinb.) , vol.94 , pp. 280-294
    • Volff, J.N.1
  • 57
    • 0037500141 scopus 로고    scopus 로고
    • Evolution by gene duplication: an update
    • Zhang J. Evolution by gene duplication: an update. Trends Ecol. Evol. 2003, 18:292-298.
    • (2003) Trends Ecol. Evol. , vol.18 , pp. 292-298
    • Zhang, J.1
  • 58
    • 35748942903 scopus 로고    scopus 로고
    • Identification of a second group of type I IFNs in fish sheds light on IFN evolution in vertebrates
    • Zou J., Tafalla C., Truckle J., Secombes C.J. Identification of a second group of type I IFNs in fish sheds light on IFN evolution in vertebrates. J. Immunol. 2007, 179:3859-3871.
    • (2007) J. Immunol. , vol.179 , pp. 3859-3871
    • Zou, J.1    Tafalla, C.2    Truckle, J.3    Secombes, C.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.