Toll-like receptor gene family and TIR-domain adapters in Danio rerio

Molecular Immunology

Volumn 40, Issue 11, 2004, Pages 759-771

  Jault, Cyril ^a   Pichon, Laurent ^a   Chluba, Johanna ^a  

^a INSERM   (France)

Author keywords

Evolution; Expression; Innate immunity; Toll like receptors; Zebrafish

Indexed keywords

ADAPTOR PROTEIN; ADAPTOR PROTEIN SARM; MYELOID DIFFERENTIATION FACTOR 88; TOLL LIKE RECEPTOR; TOLL LIKE RECEPTOR 1; TOLL LIKE RECEPTOR 10; TOLL LIKE RECEPTOR 2; TOLL LIKE RECEPTOR 3; TOLL LIKE RECEPTOR 6; TOLL LIKE RECEPTOR 7; TOLL LIKE RECEPTOR 8; TOLL LIKE RECEPTOR 9; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; GENE EXPRESSION; GENE IDENTIFICATION; GOLDFISH; MAMMAL; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN PROTEIN INTERACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; SPECIES COMPARISON; ZEBRA FISH;

CARASSIUS AURATUS; DANIO; DANIO RERIO; HEXAPODA; MAMMALIA; TAKIFUGU; TAKIFUGU RUBRIPES; TETRAODONTIDAE;

EID: 0346849669     PISSN: 01615890     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molimm.2003.10.001     Document Type: Article

References (37)

1. Akira S. Mammalian toll-like receptors. Curr. Opin. Immunol. 15:2003;5-11.
2. Akira S., Yamamoto M., Takeda K. Role of adapters in toll-like receptor signalling. Biochem. Soc. Trans. 31:2003;637-642.
3. Alexopoulou L., Holt A.C., Medzhitov R., Flavell R.A. Recognition of double-stranded RNA and activation of NF-kappaB by toll-like receptor 3. Nature. 413:2001;732-738.
4. Barton G.M., Medzhitov R. Toll-like receptor signaling pathways. Science. 6:2003;1524-1525.
5. Beutler B., Rehli M. Evolution of the TIR, tolls and TLRs: functional inferences from computational biology. Curr. Top. Microbiol. Immunol. 270:2002;1-21.
6. Bin L.H., Xu L.G., Shu H.B. TIRP, a novel Toll/interleukin-1 receptor (TIR) domain-containing adapter protein involved in TIR signaling. J. Biol. Chem. 278:2003;24526-24532.
7. Burge C.B., Karlin S. Prediction of complete gene structures in human genomic DNA. J. Mol. Biol. 268(7):1997;8-94.
8. Chow J.C., Young D.W., Golenbock D.T., Christ W.J., Gusovsky F. Toll-like receptor-4 mediates lipopolysaccharideinduced signal transduction. J. Biol. Chem. 274:1999;10689-10692.
9. Hayashi F., Smith K.D., Ozinsky A., Hawn T.R., Yi E.C., Goodlett D.R., Eng J.K., Akira S., Underhill D.M., Aderem A. The innate immune response to bacterial flagellin is mediated by toll-like receptor 5. Nature. 410:2001;1099-1103.
10. Hemmi H., Takeuchi O., Kawai T., Kaisho T., Sato S., Sanjo H., Matsumoto M., Hoshino K., Wagner H., Takeda K., Akira S. A toll-like receptor recognizes bacterial DNA. Nature. 408:2000;740-745.
11. Hemmi H., Kaisho T., Takeuch O., Sato S., Sanjo H., Hoshino K., Horiuchi T., Tomizawa H., Takeda K., Akira S. Small anti-viral compounds activate immune cells via the TLR7 MyD88 dependent signaling pathway. Nat. Immunol. 3:2002;196-200.
12. Herbomel P., Thisse B., Thisse C. Ontogeny and behaviour of early macrophages in the zebrafish embryo. Development. 126:1999;3735-3745.
13. Hoffmann J.A., Reichhart J.M. Drosophila innate immunity: an evolutionary perspective. Nat. Immunol. 3:2002;121-126.
14. Hoshino K., Takeuchi O., Kawai T., Sanjo H., Ogawa T., Takeda Y., Takeda K., Akira S. Cutting edge: toll-like receptor 4 (TLR4)-deficient mice are hyporesponsive to lipopolysaccharide: evidence for TLR4 as the Lps gene product. J. Immunol. 162:1999;3749-3752.
15. Janeway C.A. Jr. Approaching the asymptote? Evolution and revolution in immunology. Cold Spring Harb. Symp. Quant. Biol. 54:1989;1-13.
16. Kimmel C.B., Ballard W.W., Kimmel S.R., Ullmann B., Schilling T.F. Stages of embryonic development of the zebrafish. Dev. Dyn. 203:1995;253-310.
17. Liu N., Ohnishi N., Ni L., Akira S., Bacon K.B. CpG directly induces T-bet expression and inhibits IgG1 and IgE switching in B cells. Nat. Immunol. 4:2003;687-693.
18. Meijer, A.H., Gabby Krens, S.F., Medina Rodriguez, A.I., He, S., Bitter, W., Snaar-Jagalska, B.E., Spaink, H.P., 2003. Expression analysis of the Toll-like receptor and TIR domain adaptor families of Zebrafish, Molec. Immun. this issue, DOI:10.1016/j.molimm.2003.10.003 .
19. Mushegian A., Medzhitov R. Evolutionary perspective on innate immune recognition. J. Cell. Biol. 155:2001;705-710.
20. Nishiguchi M., Matsumoto M., Takao T., Hoshino M., Shimonishi Y., Tsuji S., Begum N.A., Takeuchi O., Akira S., Toyoshima K., Seya T. Mycoplasma fermentans lipoprotein M161Ag-induced cell activation is mediated by toll-like receptor 2: role of N-terminal hydrophobic portion in its multiple functions. J. Immunol. 166:2001;2610-2616.
21. O'Neill L.A., Fitzgerald K.A., Bowie A.G. The toll-IL-1 receptor adaptor family grows to five members. Trends Immunol. 24:2003;286-290.
22. Ooi J.Y., Yagi Y., Hu X., Ip Y.T. The Drosophila toll-9 activates a constitutive antimicrobial defense. EMBO Rep. 3:2002;82-87.
23. Oshiumi H., Tsujita T., Shida K., Matsumoto M., Ikeo K., Seya T. Prediction of the prototype of the human toll-like receptor gene family from the pufferfish, Fugu rubripes genome. Immunogenetics. 54:2003;791-800.
24. Pasare C., Medzhitov R. Toll pathway-dependent blockade of CD4+CD25+ T cell-mediated suppression by dendritic cells. Science. 299:2003;1033-1036.
25. Poltorak A., He X., Smirnova I., Liu M.Y., Huffel C.V., Du X., Birdwell D., Alejos E., Silva M., Galanos C., Freudenberg M., Ricciardi-Castagnoli P., Layton B., Beutler B. Defective LPS signaling in C3H/HeJ and C57BL/10ScCr mice: mutations in Tlr4 gene. Science. 282:1998;2085-2088.
26. Prothmann C., Armstrong N.J., Rupp R.A.W. The toll/IL-1 receptor binding protein MyD88 is required for Xenopus axis formation. Mech. Dev. 97:2000;85-92.
27. Rock F.L., Hardiman G., Timans J.C., Kastelein R.A., Bazan F. A family of human receptors structurally related to Drosophila toll. Proc. Natl. Acad. Sci. USA. 95:1998;588-593.
28. Schultz J., Milpetz F., Bork P., Ponting C.P. SMART a simple modular architecture research tool: identification of signaling domains. Proc. Natl. Acad. Sci. USA. 95:1998;5857-5864.
29. Takeuchi O., Kawai T., Muhlradt P.F., Morr M., Radolf J.D., Zychlinsky A., Akira S. Discrimination of bacterial lipoproteins by toll-like receptor 6. Int. Immunol. 13:2001;933-940.
30. Thisse C., Zon L.I. Organogenesis - heart and blood formation from the zebrafish point of view. Science. 295:2002;457-462.
31. Thompson J.D., Higgins D.G., Gibson T.J. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
32. Trede N.S., Zapata A., Zon L.I. Fishing for lymphoid genes. Trends Immunol. 22:2001;302-307.
33. Underhill D.M., Ozinsky A., Hajjar A.M., Stevens A., Wilson C.B., Bassetti M., Aderem A. The toll-like receptor 2 is recruited to macrophage phagosomes and discriminates between pathogens. Nature. 401:1999;811-815.
34. Westerfield, M., 1994. The Zebrafish book. A guide for the laboratory use of zebrafish, University of Oregon Press, Eugene.
35. Williams M.J., Rodriguez A., Kimbrell D.A., Eldon E.D. The 18-wheeler mutation reveals complex antibacterial gene regulation in Drosophila host defense. EMBO J. 16:1997;6120-6130.
36. Xu Y., Tao X., Shen B., Horng T., Medzhitov R., Manley J.L., Tong L. Structural basis for signal transduction by the toll/interleukin-1 receptor domains. Nature. 408:2000;111-115.
37. Zamir E., Kam Z., Yarden A. Transcription-dependent induction of G1 phase during the zebrafish midblastula transition. Mol. Cell. Biol. 17:1997;529-536.