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Volumn 237, Issue 6, 2013, Pages 1425-1441

Global transcriptome analysis and identification of a CONSTANS-like gene family in the orchid Erycina pusilla

Author keywords

Expression profiling; Flower induction; Next generation sequencing; Orchidaceae; Photoperiod; RNA Seq

Indexed keywords

ARABIDOPSIS PROTEIN; CONSTANS PROTEIN, ARABIDOPSIS; DNA BINDING PROTEIN; GREEN FLUORESCENT PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTOME; VEGETABLE PROTEIN;

EID: 84878368459     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-013-1850-z     Document Type: Article
Times cited : (31)

References (90)
  • 1
    • 77955506882 scopus 로고    scopus 로고
    • Comparative analysis of flowering in annual and perennial plants
    • Albani MC, Coupland G (2010) Comparative analysis of flowering in annual and perennial plants. Curr Top Dev Biol 91: 323-348.
    • (2010) Curr Top Dev Biol , vol.91 , pp. 323-348
    • Albani, M.C.1    Coupland, G.2
  • 3
    • 77950420409 scopus 로고    scopus 로고
    • Seasonal and developmental timing of flowering
    • Amasino R (2010) Seasonal and developmental timing of flowering. Plant J 61: 1001-1013.
    • (2010) Plant J , vol.61 , pp. 1001-1013
    • Amasino, R.1
  • 5
    • 84893445403 scopus 로고    scopus 로고
    • In the light of evolution: a reevaluation of conservation in the CO-FT regulon and its role in photoperiodic regulation of flowering time
    • Ballerini ES, Kramer EM (2011) In the light of evolution: a reevaluation of conservation in the CO-FT regulon and its role in photoperiodic regulation of flowering time. Front Plant Sci 2: 18.
    • (2011) Front Plant Sci , vol.2 , pp. 18
    • Ballerini, E.S.1    Kramer, E.M.2
  • 7
    • 0032463343 scopus 로고    scopus 로고
    • RING fingers and B-boxes: zinc-binding protein-protein interaction domains
    • Borden KLB (1998) RING fingers and B-boxes: zinc-binding protein-protein interaction domains. Biochem Cell Biol 76: 351-358.
    • (1998) Biochem Cell Biol , vol.76 , pp. 351-358
    • Borden, K.L.B.1
  • 8
    • 33745212250 scopus 로고    scopus 로고
    • A sunflower BAC library suitable for PCR screening and physical mapping of targeted genomic regions
    • Bouzidi MF, Franchel J, Tao Q, Stormo K, Mraz A, Nicolas P, Mouzeyar S (2006) A sunflower BAC library suitable for PCR screening and physical mapping of targeted genomic regions. Theor Appl Genet 113: 81-89.
    • (2006) Theor Appl Genet , vol.113 , pp. 81-89
    • Bouzidi, M.F.1    Franchel, J.2    Tao, Q.3    Stormo, K.4    Mraz, A.5    Nicolas, P.6    Mouzeyar, S.7
  • 9
    • 84857654590 scopus 로고    scopus 로고
    • Functional characterisation of HvCO1, the barley (Hordeum vulgare) flowering time ortholog of CONSTANS
    • Campoli C, Drosse B, Searle I, Coupland G, von Korff M (2012) Functional characterisation of HvCO1, the barley (Hordeum vulgare) flowering time ortholog of CONSTANS. Plant J 69: 868-880.
    • (2012) Plant J , vol.69 , pp. 868-880
    • Campoli, C.1    Drosse, B.2    Searle, I.3    Coupland, G.4    von Korff, M.5
  • 10
    • 11144327030 scopus 로고    scopus 로고
    • PCR identification of durum wheat BAC clones containing genes coding for carotenoid biosynthesis enzymes and their chromosome localization
    • Cenci A, Somma S, Chantret N, Dubcovsky J, Blanco A (2004) PCR identification of durum wheat BAC clones containing genes coding for carotenoid biosynthesis enzymes and their chromosome localization. Genome 47: 911-917.
    • (2004) Genome , vol.47 , pp. 911-917
    • Cenci, A.1    Somma, S.2    Chantret, N.3    Dubcovsky, J.4    Blanco, A.5
  • 11
    • 68949147031 scopus 로고    scopus 로고
    • Four orchid (Oncidium Gower Ramsey) AP1/AGL9-like MADS box genes show novel expression patterns and cause different effects on floral transition and formation in Arabidopsis thaliana
    • Chang YY, Chiu YF, Wu JW, Yang CH (2009) Four orchid (Oncidium Gower Ramsey) AP1/AGL9-like MADS box genes show novel expression patterns and cause different effects on floral transition and formation in Arabidopsis thaliana. Plant Cell Physiol 50: 1425-1438.
    • (2009) Plant Cell Physiol , vol.50 , pp. 1425-1438
    • Chang, Y.Y.1    Chiu, Y.F.2    Wu, J.W.3    Yang, C.H.4
  • 12
    • 75949090237 scopus 로고    scopus 로고
    • Characterization of the possible roles for B Class MADS box genes in regulation of perianth formation in Orchid (Oncidium Gower Ramsey)
    • Chang YY, Kao NH, Li JY, Hsu WH, Liang YL, Wu JW, Yang CH (2010) Characterization of the possible roles for B Class MADS box genes in regulation of perianth formation in Orchid (Oncidium Gower Ramsey). Plant Physiol 152: 837-853.
    • (2010) Plant Physiol , vol.152 , pp. 837-853
    • Chang, Y.Y.1    Kao, N.H.2    Li, J.Y.3    Hsu, W.H.4    Liang, Y.L.5    Wu, J.W.6    Yang, C.H.7
  • 13
    • 80052896046 scopus 로고    scopus 로고
    • Characterization of Oncidium 'Gower Ramsey' transcriptomes using 454 GS-FLX pyrosequencing and their application to the identification of genes associated with flowering time
    • Chang YY, Chu YW, Chen CW, Leu WM, Hsu HF, Yang CH (2011) Characterization of Oncidium 'Gower Ramsey' transcriptomes using 454 GS-FLX pyrosequencing and their application to the identification of genes associated with flowering time. Plant Cell Physiol 52: 1532-1545.
    • (2011) Plant Cell Physiol , vol.52 , pp. 1532-1545
    • Chang, Y.Y.1    Chu, Y.W.2    Chen, C.W.3    Leu, W.M.4    Hsu, H.F.5    Yang, C.H.6
  • 14
    • 84862805982 scopus 로고    scopus 로고
    • Molecular characterization and expression profiles of MaCOL1, a CONSTANS-like gene in banana fruit
    • Chen J, Chen JY, Wang JN, Kuang JF, Shan W, Lu WJ (2012) Molecular characterization and expression profiles of MaCOL1, a CONSTANS-like gene in banana fruit. Gene 496: 110-117.
    • (2012) Gene , vol.496 , pp. 110-117
    • Chen, J.1    Chen, J.Y.2    Wang, J.N.3    Kuang, J.F.4    Shan, W.5    Lu, W.J.6
  • 15
    • 32944471018 scopus 로고    scopus 로고
    • Overexpression of COL9, a CONSTANS-LIKE gene, delays flowering by reducing expression of CO and FT in Arabidopsis thaliana
    • Cheng XF, Wang ZY (2005) Overexpression of COL9, a CONSTANS-LIKE gene, delays flowering by reducing expression of CO and FT in Arabidopsis thaliana. Plant J 43: 758-768.
    • (2005) Plant J , vol.43 , pp. 758-768
    • Cheng, X.F.1    Wang, Z.Y.2
  • 16
    • 46849083934 scopus 로고    scopus 로고
    • Sugar beet contains a large CONSTANS-LIKE gene family including a CO homologue that is independent of the early-bolting (B) gene locus
    • Chia TY, Müller A, Jung C, Mutasa-Göttgens ES (2008) Sugar beet contains a large CONSTANS-LIKE gene family including a CO homologue that is independent of the early-bolting (B) gene locus. J Exp Bot 59: 2735-2748.
    • (2008) J Exp Bot , vol.59 , pp. 2735-2748
    • Chia, T.Y.1    Müller, A.2    Jung, C.3    Mutasa-Göttgens, E.S.4
  • 17
    • 43049090793 scopus 로고    scopus 로고
    • Differential expression of MYB gene (OgMYB1) determines color patterning in floral tissue of Oncidium Gower Ramsey
    • Chiou CY, Yeh KW (2008) Differential expression of MYB gene (OgMYB1) determines color patterning in floral tissue of Oncidium Gower Ramsey. Plant Mol Biol 66: 379-388.
    • (2008) Plant Mol Biol , vol.66 , pp. 379-388
    • Chiou, C.Y.1    Yeh, K.W.2
  • 18
    • 80054011910 scopus 로고    scopus 로고
    • In vitro fruting and seed production in Erycina pusilla (L.) N. H. Willams and M. W. Chase
    • Chiu YT, Lin CS, Chang C (2011) In vitro fruting and seed production in Erycina pusilla (L.) N. H. Willams and M. W. Chase. Propag Ornam Plants 11: 131-136.
    • (2011) Propag Ornam Plants , vol.11 , pp. 131-136
    • Chiu, Y.T.1    Lin, C.S.2    Chang, C.3
  • 19
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
    • Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21: 3674-3676.
    • (2005) Bioinformatics , vol.21 , pp. 3674-3676
    • Conesa, A.1    Götz, S.2    García-Gómez, J.M.3    Terol, J.4    Talón, M.5    Robles, M.6
  • 20
    • 33645750947 scopus 로고    scopus 로고
    • Arabidopsis CONSTANS-LIKE3 is a positive regulator of red light signaling and root growth
    • Datta S, Hettiarachchi GH, Deng XW, Holm M (2006) Arabidopsis CONSTANS-LIKE3 is a positive regulator of red light signaling and root growth. Plant Cell 18: 70-84.
    • (2006) Plant Cell , vol.18 , pp. 70-84
    • Datta, S.1    Hettiarachchi, G.H.2    Deng, X.W.3    Holm, M.4
  • 21
    • 77956753681 scopus 로고    scopus 로고
    • High throughput DNA sequencing: the new sequencing revolution
    • Delseny M, Han B, Hsing YI (2010) High throughput DNA sequencing: the new sequencing revolution. Plant Sci 179: 407-422.
    • (2010) Plant Sci , vol.179 , pp. 407-422
    • Delseny, M.1    Han, B.2    Hsing, Y.I.3
  • 22
    • 70649097226 scopus 로고    scopus 로고
    • Rapid identification of the three homoeologues of the wheat dwarfing gene Rht using a novel PCR-based screen of three-dimensional BAC pools
    • Febrer M, Wilhelm E, Al-Kaff N, Wright J, Powell W, Bevan MW, Boulton MI (2009) Rapid identification of the three homoeologues of the wheat dwarfing gene Rht using a novel PCR-based screen of three-dimensional BAC pools. Genome 52: 993-1000.
    • (2009) Genome , vol.52 , pp. 993-1000
    • Febrer, M.1    Wilhelm, E.2    Al-Kaff, N.3    Wright, J.4    Powell, W.5    Bevan, M.W.6    Boulton, M.I.7
  • 24
    • 79957842166 scopus 로고    scopus 로고
    • Computational methods for transcriptome annotation and quantification using RNA-seq
    • Garber M, Grabherr MG, Guttman M, Trapnell C (2011) Computational methods for transcriptome annotation and quantification using RNA-seq. Nat Methods 8: 469-477.
    • (2011) Nat Methods , vol.8 , pp. 469-477
    • Garber, M.1    Grabherr, M.G.2    Guttman, M.3    Trapnell, C.4
  • 25
    • 0000434063 scopus 로고
    • Effect of the relative length of day and night and other factors of the environment on growth and reproduction in plants
    • Garner W, Allard HA (1920) Effect of the relative length of day and night and other factors of the environment on growth and reproduction in plants. J Agricultural Res 18: 553-606.
    • (1920) J Agricultural Res , vol.18 , pp. 553-606
    • Garner, W.1    Allard, H.A.2
  • 26
    • 84861329310 scopus 로고    scopus 로고
    • Potato CONSTANS is involved in photoperiodic tuberization in a graft-transmissible manner
    • González-Schain ND, Díaz-Mendoza M, Zurczak M, Suárez-López P (2012) Potato CONSTANS is involved in photoperiodic tuberization in a graft-transmissible manner. Plant J 70: 678-690.
    • (2012) Plant J , vol.70 , pp. 678-690
    • González-Schain, N.D.1    Díaz-Mendoza, M.2    Zurczak, M.3    Suárez-López, P.4
  • 27
    • 0037394262 scopus 로고    scopus 로고
    • The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis
    • Griffiths S, Dunford RP, Coupland G, Laurie DA (2003) The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis. Plant Physiol 131: 1855-1867.
    • (2003) Plant Physiol , vol.131 , pp. 1855-1867
    • Griffiths, S.1    Dunford, R.P.2    Coupland, G.3    Laurie, D.A.4
  • 28
    • 84861709625 scopus 로고    scopus 로고
    • De novo characterization of the root transcriptome of a traditional Chinese medicinal plant Polygonum cuspidatum
    • Hao D, Ma P, Mu J, Chen S, Xiao P, Peng Y, Huo L, Xu L, Sun C (2012) De novo characterization of the root transcriptome of a traditional Chinese medicinal plant Polygonum cuspidatum. Sci China Life Sci 55: 452-466.
    • (2012) Sci China Life Sci , vol.55 , pp. 452-466
    • Hao, D.1    Ma, P.2    Mu, J.3    Chen, S.4    Xiao, P.5    Peng, Y.6    Huo, L.7    Xu, L.8    Sun, C.9
  • 30
    • 0037295687 scopus 로고    scopus 로고
    • Shedding light on the circadian clock and the photoperiodic control of flowering
    • Hayama R, Coupland G (2003) Shedding light on the circadian clock and the photoperiodic control of flowering. Curr Opin Plant Biol 6: 13-19.
    • (2003) Curr Opin Plant Biol , vol.6 , pp. 13-19
    • Hayama, R.1    Coupland, G.2
  • 31
    • 3042527892 scopus 로고    scopus 로고
    • The molecular basis of diversity in the photoperiodic flowering responses of Arabidopsis and rice
    • Hayama R, Coupland G (2004) The molecular basis of diversity in the photoperiodic flowering responses of Arabidopsis and rice. Plant Physiol 135: 677-684.
    • (2004) Plant Physiol , vol.135 , pp. 677-684
    • Hayama, R.1    Coupland, G.2
  • 32
    • 0036016851 scopus 로고    scopus 로고
    • Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method
    • Hayama R, Izawa T, Shimamoto K (2002) Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method. Plant Cell Physiol 43: 494-504.
    • (2002) Plant Cell Physiol , vol.43 , pp. 494-504
    • Hayama, R.1    Izawa, T.2    Shimamoto, K.3
  • 33
    • 0037102418 scopus 로고    scopus 로고
    • Antagonistic regulation of flowering-time gene SOC1 by CONSTANS and FLC via separate promoter motifs
    • Hepworth SR, Valverde F, Ravenscroft D, Mouradov A, Coupland G (2002) Antagonistic regulation of flowering-time gene SOC1 by CONSTANS and FLC via separate promoter motifs. EMBO J 21: 4327-4337.
    • (2002) EMBO J , vol.21 , pp. 4327-4337
    • Hepworth, S.R.1    Valverde, F.2    Ravenscroft, D.3    Mouradov, A.4    Coupland, G.5
  • 34
    • 58249130475 scopus 로고    scopus 로고
    • Identification of PaCOL1 and PaCOL2, two CONSTANS-like genes showing decreased transcript levels preceding short day induced growth cessation in Norway spruce
    • Holefors A, Opseth L, Ree Rosnes AK, Ripel L, Snipen L, Fossdal CG, Olsen JE (2009) Identification of PaCOL1 and PaCOL2, two CONSTANS-like genes showing decreased transcript levels preceding short day induced growth cessation in Norway spruce. Plant Physiol Biochem 47: 105-115.
    • (2009) Plant Physiol Biochem , vol.47 , pp. 105-115
    • Holefors, A.1    Opseth, L.2    Ree Rosnes, A.K.3    Ripel, L.4    Snipen, L.5    Fossdal, C.G.6    Olsen, J.E.7
  • 35
    • 68949163242 scopus 로고    scopus 로고
    • Functional analysis of FT and TFL1 orthologs from orchid (Oncidium Gower Ramsey) that regulate the vegetative to reproductive transition
    • Hou CJ, Yang CH (2009) Functional analysis of FT and TFL1 orthologs from orchid (Oncidium Gower Ramsey) that regulate the vegetative to reproductive transition. Plant Cell Physiol 50: 1544-1557.
    • (2009) Plant Cell Physiol , vol.50 , pp. 1544-1557
    • Hou, C.J.1    Yang, C.H.2
  • 37
    • 0036808855 scopus 로고    scopus 로고
    • An orchid (Oncidium Gower Ramsey) AP3-like MADS gene regulates floral formation and initiation
    • Hsu HF, Yang CH (2002) An orchid (Oncidium Gower Ramsey) AP3-like MADS gene regulates floral formation and initiation. Plant Cell Physiol 43: 1198.
    • (2002) Plant Cell Physiol , vol.43 , pp. 1198
    • Hsu, H.F.1    Yang, C.H.2
  • 38
    • 0042785622 scopus 로고    scopus 로고
    • Ectopic expression of an orchid (Oncidium Gower Ramsey) AGL6 -like gene promotes flowering by activating flowering time genes in Arabidopsis thaliana
    • Hsu HF, Huang CH, Chou LT, Yang CH (2003) Ectopic expression of an orchid (Oncidium Gower Ramsey) AGL6 -like gene promotes flowering by activating flowering time genes in Arabidopsis thaliana. Plant Cell Physiol 44: 783-794.
    • (2003) Plant Cell Physiol , vol.44 , pp. 783-794
    • Hsu, H.F.1    Huang, C.H.2    Chou, L.T.3    Yang, C.H.4
  • 39
    • 77953583244 scopus 로고    scopus 로고
    • C/D class MADS box genes from two monocots, orchid (Oncidium Gower Ramsey) and lily (Lilium longiflorum), exhibit different effects on floral transition and formation in Arabidopsis thaliana
    • Hsu HF, Hsieh WP, Chen MK, Chang YY, Yang CH (2010) C/D class MADS box genes from two monocots, orchid (Oncidium Gower Ramsey) and lily (Lilium longiflorum), exhibit different effects on floral transition and formation in Arabidopsis thaliana. Plant Cell Physiol 51: 1029-1045.
    • (2010) Plant Cell Physiol , vol.51 , pp. 1029-1045
    • Hsu, H.F.1    Hsieh, W.P.2    Chen, M.K.3    Chang, Y.Y.4    Yang, C.H.5
  • 41
    • 33750355035 scopus 로고    scopus 로고
    • Photoperiodic control of flowering: not only by coincidence
    • Imaizumi T, Kay SA (2006) Photoperiodic control of flowering: not only by coincidence. Trends Plant Sci 11: 550-558.
    • (2006) Trends Plant Sci , vol.11 , pp. 550-558
    • Imaizumi, T.1    Kay, S.A.2
  • 42
    • 0033290515 scopus 로고    scopus 로고
    • ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences
    • Iseli C, Jongeneel CV, Bucher P (1999) ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. Proc Int Conf Intell Syst Mol Biol 1: 138-148.
    • (1999) Proc Int Conf Intell Syst Mol Biol , vol.1 , pp. 138-148
    • Iseli, C.1    Jongeneel, C.V.2    Bucher, P.3
  • 46
    • 84855895095 scopus 로고    scopus 로고
    • The differential expression of HvCO9, a member of the CONSTANS-like gene family, contributes to the control of flowering under short-day conditions in barley
    • Kikuchi R, Kawahigashi H, Oshima M, Ando T, Handa H (2012) The differential expression of HvCO9, a member of the CONSTANS-like gene family, contributes to the control of flowering under short-day conditions in barley. J Exp Bot 63: 773-784.
    • (2012) J Exp Bot , vol.63 , pp. 773-784
    • Kikuchi, R.1    Kawahigashi, H.2    Oshima, M.3    Ando, T.4    Handa, H.5
  • 47
    • 0025886455 scopus 로고
    • A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana
    • Koornneef M, Hanhart CJ, van der Veen JH (1991) A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana. Mol Gen Genet 229: 57-66.
    • (1991) Mol Gen Genet , vol.229 , pp. 57-66
    • Koornneef, M.1    Hanhart, C.J.2    van der Veen, J.H.3
  • 48
    • 0034095041 scopus 로고    scopus 로고
    • Interactions of the developmental regulator ABI3 with proteins identified from developing Arabidopsis seeds
    • Kurup S, Jones HD, Holdsworth MJ (2000) Interactions of the developmental regulator ABI3 with proteins identified from developing Arabidopsis seeds. Plant J 21: 143-155.
    • (2000) Plant J , vol.21 , pp. 143-155
    • Kurup, S.1    Jones, H.D.2    Holdsworth, M.J.3
  • 49
    • 0035007091 scopus 로고    scopus 로고
    • Analysis of the function of two circadian-regulated CONSTANS-LIKE genes
    • Ledger S, Strayer C, Ashton F, Kay SA, Putterill J (2001) Analysis of the function of two circadian-regulated CONSTANS-LIKE genes. Plant J 26: 15-22.
    • (2001) Plant J , vol.26 , pp. 15-22
    • Ledger, S.1    Strayer, C.2    Ashton, F.3    Kay, S.A.4    Putterill, J.5
  • 50
    • 0032294990 scopus 로고    scopus 로고
    • The transition to flowering
    • Levy YY, Dean C (1998) The transition to flowering. Plant Cell 10: 1973-1990.
    • (1998) Plant Cell , vol.10 , pp. 1973-1990
    • Levy, Y.Y.1    Dean, C.2
  • 52
    • 84861170775 scopus 로고    scopus 로고
    • De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)
    • Li D, Deng Z, Qin B, Liu X, Men Z (2012) De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.). BMC Genomics 13: 192.
    • (2012) BMC Genomics , vol.13 , pp. 192
    • Li, D.1    Deng, Z.2    Qin, B.3    Liu, X.4    Men, Z.5
  • 53
    • 52949096084 scopus 로고    scopus 로고
    • Next-generation DNA sequencing methods
    • Mardis ER (2008) Next-generation DNA sequencing methods. Annu Rev Genomics Hum Genet 9: 387-402.
    • (2008) Annu Rev Genomics Hum Genet , vol.9 , pp. 387-402
    • Mardis, E.R.1
  • 55
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies-the next generation
    • Metzker ML (2010) Sequencing technologies-the next generation. Nat Rev Genet 11: 31-46.
    • (2010) Nat Rev Genet , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 56
    • 53649088131 scopus 로고    scopus 로고
    • Applications of next-generation sequencing technologies in functional genomics
    • Morozova O, Marra MA (2008) Applications of next-generation sequencing technologies in functional genomics. Genomics 92: 255-264.
    • (2008) Genomics , vol.92 , pp. 255-264
    • Morozova, O.1    Marra, M.A.2
  • 57
    • 0036277413 scopus 로고    scopus 로고
    • Control of flowering time: interacting pathways as a basis for diversity
    • Mouradov A, Cremer F, Coupland G (2002) Control of flowering time: interacting pathways as a basis for diversity. Plant Cell 14(Suppl): S111-S130.
    • (2002) Plant Cell , vol.14 , Issue.SUPPL.
    • Mouradov, A.1    Cremer, F.2    Coupland, G.3
  • 58
    • 84982358134 scopus 로고
    • A revised medium for rapid growth and bioassays with tobacco cultures
    • Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco cultures. Physiol Plant 15: 473-497.
    • (1962) Physiol Plant , vol.15 , pp. 473-497
    • Murashige, T.1    Skoog, F.2
  • 59
    • 0141907762 scopus 로고    scopus 로고
    • Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice
    • Nemoto Y, Kisaka M, Fuse T, Yano M, Ogihara Y (2003) Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice. Plant J 36: 82-93.
    • (2003) Plant J , vol.36 , pp. 82-93
    • Nemoto, Y.1    Kisaka, M.2    Fuse, T.3    Yano, M.4    Ogihara, Y.5
  • 60
    • 79957930642 scopus 로고    scopus 로고
    • De novo sequence assembly and characterization of the floral transcriptome in cross- and self-fertilizing plants
    • Ness RW, Siol M, Barrett SC (2011) De novo sequence assembly and characterization of the floral transcriptome in cross- and self-fertilizing plants. BMC Genomics 12: 298.
    • (2011) BMC Genomics , vol.12 , pp. 298
    • Ness, R.W.1    Siol, M.2    Barrett, S.C.3
  • 61
    • 84859367618 scopus 로고    scopus 로고
    • Complete chloroplast genome sequence of an orchid model plant candidate: Erycina pusilla apply in tropical Oncidium breeding
    • Pan IC, Liao DC, Wu FH, Daniell H, Singh ND, Chang C, Shih MC, Chan MT, Lin CS (2012) Complete chloroplast genome sequence of an orchid model plant candidate: Erycina pusilla apply in tropical Oncidium breeding. PLoS One 7: e34738.
    • (2012) PLoS One , vol.7
    • Pan, I.C.1    Liao, D.C.2    Wu, F.H.3    Daniell, H.4    Singh, N.D.5    Chang, C.6    Shih, M.C.7    Chan, M.T.8    Lin, C.S.9
  • 62
    • 84856468953 scopus 로고    scopus 로고
    • NGS QC Toolkit: a toolkit for quality control of next generation sequencing data
    • Patel RK, Jain M (2012) NGS QC Toolkit: a toolkit for quality control of next generation sequencing data. PLoS One 7: e30619.
    • (2012) PLoS One , vol.7
    • Patel, R.K.1    Jain, M.2
  • 63
    • 64349083552 scopus 로고    scopus 로고
    • Genetic integrity of sympatrichybridising plant species: the case of Orchis italica and O. anthropophora
    • Pellegrino G, Bellusci F, Musacchio A (2009) Genetic integrity of sympatrichybridising plant species: the case of Orchis italica and O. anthropophora. Plant Biol 11: 434-441.
    • (2009) Plant Biol , vol.11 , pp. 434-441
    • Pellegrino, G.1    Bellusci, F.2    Musacchio, A.3
  • 64
    • 77956568182 scopus 로고    scopus 로고
    • Hybridization and introgression across different ploidy levels in the neotropical orchids Epidendrum fulgens and E. puniceoluteum (Orchidaceae)
    • Pinheiro F, De Barros F, Palma-Silva C, Meyer D, Fay MF, Suzuki RM, Lexer C, Cozzolino S (2010) Hybridization and introgression across different ploidy levels in the neotropical orchids Epidendrum fulgens and E. puniceoluteum (Orchidaceae). Mol Ecol 19: 3981-3994.
    • (2010) Mol Ecol , vol.19 , pp. 3981-3994
    • Pinheiro, F.1    De Barros, F.2    Palma-Silva, C.3    Meyer, D.4    Fay, M.F.5    Suzuki, R.M.6    Lexer, C.7    Cozzolino, S.8
  • 65
    • 0028927730 scopus 로고
    • The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors
    • Putterill J, Robson F, Lee K, Simon R, Coupland G (1995) The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors. Cell 80: 847-857.
    • (1995) Cell , vol.80 , pp. 847-857
    • Putterill, J.1    Robson, F.2    Lee, K.3    Simon, R.4    Coupland, G.5
  • 66
    • 0035544373 scopus 로고    scopus 로고
    • Functional importance of conserved domains in the flowering-time gene CONSTANS demonstrated by analysis of mutant alleles and transgenic plants
    • Robson F, Costa MM, Hepworth SR, Vizir I, Piñeiro M, Reeves PH, Putterill J, Coupland G (2001) Functional importance of conserved domains in the flowering-time gene CONSTANS demonstrated by analysis of mutant alleles and transgenic plants. Plant J 28: 619-631.
    • (2001) Plant J , vol.28 , pp. 619-631
    • Robson, F.1    Costa, M.M.2    Hepworth, S.R.3    Vizir, I.4    Piñeiro, M.5    Reeves, P.H.6    Putterill, J.7    Coupland, G.8
  • 67
    • 77956360994 scopus 로고    scopus 로고
    • Reticulate evolution in diploid and tetraploid species of Polystachya (Orchidaceae) as shown by plastid DNA sequences and low-copy nuclear genes
    • Russell A, Samuel R, Klejna V, Barfuss MH, Rupp B, Chase MW (2010) Reticulate evolution in diploid and tetraploid species of Polystachya (Orchidaceae) as shown by plastid DNA sequences and low-copy nuclear genes. Ann Bot 106: 37-56.
    • (2010) Ann Bot , vol.106 , pp. 37-56
    • Russell, A.1    Samuel, R.2    Klejna, V.3    Barfuss, M.H.4    Rupp, B.5    Chase, M.W.6
  • 69
    • 79952045110 scopus 로고    scopus 로고
    • Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds
    • Shi CY, Yang H, Wei CL, Yu O, Zhang ZZ, Jiang CJ, Sun J, Li YY, Chen Q, Xia T, Wan XC (2011) Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds. BMC Genomics 12: 131.
    • (2011) BMC Genomics , vol.12 , pp. 131
    • Shi, C.Y.1    Yang, H.2    Wei, C.L.3    Yu, O.4    Zhang, Z.Z.5    Jiang, C.J.6    Sun, J.7    Li, Y.Y.8    Chen, Q.9    Xia, T.10    Wan, X.C.11
  • 70
    • 0037066492 scopus 로고    scopus 로고
    • Arabidopsis, the Rosetta stone of flowering time?
    • Simpson GG, Dean C (2002) Arabidopsis, the Rosetta stone of flowering time? Science 296: 285-289.
    • (2002) Science , vol.296 , pp. 285-289
    • Simpson, G.G.1    Dean, C.2
  • 73
    • 0035953691 scopus 로고    scopus 로고
    • CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis
    • Suárez-López P, Wheatley K, Robson F, Onouchi H, Valverde F, Coupland G (2001) CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 410: 1116-1120.
    • (2001) Nature , vol.410 , pp. 1116-1120
    • Suárez-López, P.1    Wheatley, K.2    Robson, F.3    Onouchi, H.4    Valverde, F.5    Coupland, G.6
  • 74
    • 84866436067 scopus 로고    scopus 로고
    • De novo assembly and characterization of the garlic (Allium sativum) bud transcriptome by Illumina sequencing
    • Sun X, Zhou S, Meng F, Liu S (2012) De novo assembly and characterization of the garlic (Allium sativum) bud transcriptome by Illumina sequencing. Plant Cell Rep 31: 1823-1828.
    • (2012) Plant Cell Rep , vol.31 , pp. 1823-1828
    • Sun, X.1    Zhou, S.2    Meng, F.3    Liu, S.4
  • 75
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 77
    • 70350719618 scopus 로고    scopus 로고
    • Ectopic expression of two MADS box genes from orchid (Oncidium Gower Ramsey) and lily (Lilium longiflorum) alters flower transition and formation in Eustoma grandiflorum
    • Thiruvengadam M, Yang CH (2009) Ectopic expression of two MADS box genes from orchid (Oncidium Gower Ramsey) and lily (Lilium longiflorum) alters flower transition and formation in Eustoma grandiflorum. Plant Cell Rep 28: 1463-1473.
    • (2009) Plant Cell Rep , vol.28 , pp. 1463-1473
    • Thiruvengadam, M.1    Yang, C.H.2
  • 78
    • 34248176328 scopus 로고    scopus 로고
    • Light signals and flowering
    • Thomas B (2006) Light signals and flowering. J Exp Bot 57: 3387-3393.
    • (2006) J Exp Bot , vol.57 , pp. 3387-3393
    • Thomas, B.1
  • 79
    • 0027968068 scopus 로고
    • Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 80
    • 0035083772 scopus 로고    scopus 로고
    • Two B or not two B? Overview of the rapidly expanding B-box family of proteins
    • Torok M, Elkin LD (2000) Two B or not two B? Overview of the rapidly expanding B-box family of proteins. Differentiation 67: 63-71.
    • (2000) Differentiation , vol.67 , pp. 63-71
    • Torok, M.1    Elkin, L.D.2
  • 81
    • 44949113265 scopus 로고    scopus 로고
    • Regulation and identity of florigen: FLOWERING LOCUS T moves center stage
    • Turck F, Fornara F, Coupland G (2008) Regulation and identity of florigen: FLOWERING LOCUS T moves center stage. Annu Rev Plant Biol 59: 573-594.
    • (2008) Annu Rev Plant Biol , vol.59 , pp. 573-594
    • Turck, F.1    Fornara, F.2    Coupland, G.3
  • 82
    • 79957485677 scopus 로고    scopus 로고
    • CONSTANS and the evolutionary origin of photoperiodic timing of flowering
    • Valcerde F (2011) CONSTANS and the evolutionary origin of photoperiodic timing of flowering. J Exp Bot 62: 2453-2463.
    • (2011) J Exp Bot , vol.62 , pp. 2453-2463
    • Valcerde, F.1
  • 84
    • 78650502725 scopus 로고    scopus 로고
    • De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweet potato (Ipomoea batatas)
    • Wang Z, Fang B, Chen J, Zhang X, Luo Z, Huang L, Chen X, Li Y (2010) De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweet potato (Ipomoea batatas). BMC Genomics 11: 726.
    • (2010) BMC Genomics , vol.11 , pp. 726
    • Wang, Z.1    Fang, B.2    Chen, J.3    Zhang, X.4    Luo, Z.5    Huang, L.6    Chen, X.7    Li, Y.8
  • 86
    • 79955120860 scopus 로고    scopus 로고
    • Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
    • Yang SS, Tu ZJ, Cheung F, Xu WW, Lamb JF, Jung HJ, Vance CP, Gronwald JW (2011) Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems. BMC Genomics 12: 199.
    • (2011) BMC Genomics , vol.12 , pp. 199
    • Yang, S.S.1    Tu, Z.J.2    Cheung, F.3    Xu, W.W.4    Lamb, J.F.5    Jung, H.J.6    Vance, C.P.7    Gronwald, J.W.8
  • 90
    • 79951770806 scopus 로고    scopus 로고
    • Cloning and characterization of a novel CONSTANS-like gene from Phalaenopsis hybrid
    • Zhang JX, Wu KL, Tian LN, Zeng SJ, Duan J (2011) Cloning and characterization of a novel CONSTANS-like gene from Phalaenopsis hybrid. Acta Physiol Plant 33: 409-417.
    • (2011) Acta Physiol Plant , vol.33 , pp. 409-417
    • Zhang, J.X.1    Wu, K.L.2    Tian, L.N.3    Zeng, S.J.4    Duan, J.5


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