Identification of PaCOL1 and PaCOL2, two CONSTANS-like genes showing decreased transcript levels preceding short day induced growth cessation in Norway spruce

Plant Physiology and Biochemistry

Volumn 47, Issue 2, 2009, Pages 105-115

  Holefors, Anna ^a   Opseth, Lars ^a   Ree Rosnes, Anne Katrine ^a   Ripel, Linda ^a   Snipen, Lars ^a   Fossdal, Carl Gunnar ^b   Olsen, Jorunn E ^a  

^a NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

^b NORWEGIAN INSTITUTE OF BIOECONOMY RESEARCH   (Norway)

Author keywords

CONSTANS like gene; Growth cessation; Norway spruce; Picea abies; Woody plant

Indexed keywords

ARABIDOPSIS PROTEIN; CONSTANS PROTEIN, ARABIDOPSIS; DNA BINDING PROTEIN; TRANSCRIPTION FACTOR; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLASSIFICATION; DARKNESS; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; LIGHT; MOLECULAR GENETICS; PHOTOPERIODICITY; PLANT GENE; PLANT GENOME; SEQUENCE ALIGNMENT; SPRUCE;

AMINO ACID SEQUENCE; ARABIDOPSIS PROTEINS; DARKNESS; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GENOME, PLANT; LIGHT; MOLECULAR SEQUENCE DATA; PHOTOPERIOD; PICEA; PLANT PROTEINS; SEQUENCE ALIGNMENT; TRANSCRIPTION FACTORS;

ARABIDOPSIS; GYMNOSPERMAE; MAGNOLIOPHYTA; PICEA ABIES;

EID: 58249130475     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2008.11.003     Document Type: Article

References (60)

1. Nitch J.P. Photoperiodism in woody plants. Proc. Am. Soc. Hortic. Sci. 70 (1957) 526-544
2. Weiser C.J. Cold resistance and injury in woody plants. Science 169 (1970) 1269-1278
3. Heide O.M. Growth and dormancy in Norway spruce ecotypes (Picea abies). I. Interaction of photoperiod and temperature. Physiol. Plant 30 (1974) 1-12
4. Heide O.M. Growth and dormancy in Norway spruce ecotypes. II. After-effects of photoperiod and temperature on growth and development in subsequent years. Physiol. Plant 31 (1974) 131-139
5. Junttila O. Apical growth cessation and shoot tip abscission in Salix. Physiol. Plant 38 (1976) 278-286
6. Håbjørg A. Effects of photoperiod and temperature on growth and development of three latitudinal and three altitudinal populations of Betula pubescens Ehrh. Meld. Nor. Landbrukshøgsk. 51 (1972) 1-27
7. Håbjørg A. Effects of light quality, light intensity and night temperature on growth and development of three latitudinal populations of Betula pubescens Ehrh. Meld. Nor. Landbrukshøgsk. 51 (1972) 1-17
8. Howe G.T., Gardner G., Hackett W.P., and Furnier G.R. Phytochrome control of short day induced bud set in black cottonwood. Physiol. Plant 97 (1996) 95-103
9. Olsen J.E., Junttila O., Nilsen J., Eriksson M.E., Martinussen I., Olsson O., Sandberg G., and Moritz T. Ectopic expression of oat phytochrome A in hybrid aspen changes critical day length for growth and prevents cold acclimatization. Plant J 12 (1997) 1339-1350
10. Putterill J., Robson F., Lee K., Simon R., and Coupland G. The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors. Cell 80 (1995) 847-857
11. Valverde F., Mouradov A., Soppe W., Ravenscroft D., Samach A., and Coupland G. Photoreceptor regulation of CONSTANS protein in photoperiodic flowering. Science 303 (2004) 1003-1006
12. Suarez-Lopez P., Wheatley K., Robson F., Onouchi H., Valverde F., and Coupland G. CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 410 (2001) 1116-1119
13. Yanovsky M.J., and Kay S.A. Molecular basis of seasonal time measurement in Arabidopsis. Nature 419 (2002) 308-311
14. Kardailsky I., Shukla V.K., Ahn J.H., Dagenais N., Christensen S.K., Nguyen J.T., Chory J., Harrison M.J., and Weigel D. Activation tagging of the floral inducer FT. Science 286 (1999) 1962-1965
15. Kobayashi Y., Kaya H., Goto K., Iwabuchi M., and Araki T. A pair of related genes with antagonistic roles in mediating flowering signals. Science 286 (1999) 1960-1962
16. Onouchi H., Igeño M.I., Périlleux C., Graves K., and Coupland G. Mutagenesis of plants over expressing CONSTANS demonstrates novel interactions among Arabidopsis flowering-time genes. Plant Cell 12 (2000) 885-900
17. Samach A., Onouchi A., Gold S.E., Ditta G.S., Schwarz-Sommer Z., Yanovsky M.F., and Coupland G. Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis. Science 288 (2000) 1613-1616
18. Borner R., Kampmann G., Chandler J., Gleissner R., Wisman E., Apel K., and Melzer S. A MADS domain gene involved in the transition to flowering in Arabidopsis. Plant J. 24 (2000) 591-599
19. Nemoto Y., Kisaka M., Fuse T., Yano M., and Ogihara Y. Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice. Plant J. 36 (2003) 82-93
20. Martin J., Storgaard M., Andersen C.H., and Nielsen K.K. Photoperiodic regulation of flowering in perennial ryegrass involving a CONSTANS-like homolog. Plant Mol. Biol. 56 (2004) 159-169
21. Liu J.Y., Yu J.P., McIntosh L., Kende H., and Zeevaart J.A.D. Isolation of a CONSTANS ortholog from Pharbitis nil and its role in flowering. Plant Physiol. 125 (2001) 1821-1830
22. Yano M., Katayose Y., Ashikari M., Yamanouchi U., Monna L., Fuse T., Baba T., Yamamoto K., Umehara Y., Nagamura Y., and Sasaki T. Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 12 (2000) 2473-2483
23. Hayama R., Izawa T., and Shimamoto K. Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method. Plant Cell Physiol. 43 (2002) 494-504
24. Hayama R., Yokoi S., Tamaki S., Yano M., and Shimamoto K. Adaptation of photoperiodic control pathways produces short-day flowering in rice. Nature 422 (2003) 719-722
25. Martínez-García J.F., Virgós-Soler A., and Prat S. Control of photoperiod-regulated tuberization in potato by the Arabidopsis flowering time gene CONSTANS. Proc. Natl. Acad. Sci. U.S.A. 12 (2002) 15211-15216
26. Shimizu M., Ichikawa K., and Aoki S. Photoperiod-regulated expression of the PpCOL1 gene encoding a homolog of CO/COL proteins in the moss Physcomitrella patens. Biochem. Biophys. Res. Comm. 324 (2004) 1296-1301
27. Yuceer C., Harkess R.L., Land Jr. S., and Luthe D.S. Structure and developmental regulation of CONSTANS-LIKE genes isolated from Populus deltoides. Plant Sci. 163 (2002) 615-625
28. Böhlenius H., Huang T., Charbonnel-Campaa L., Brunner A., Jansson S., Strauss S., and Nilsson O. CO/FT regulatory module controls timing of flowering and seasonal growth cessation in trees. Science 312 (2006) 1040-1043
29. Holliday J.A., Ralph S.G., White R., Bohlmann J., and Aitken S.N. Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis). New Phytol. 178 (2008) 103-122
30. Gyllenstrand N., Clapham D., Källman T., and Lagercrantz U. A Norway spruce FLOWERING LOCUS T homolog is implicated in control of growth rhythm in conifers. Plant Physiol. 144 (2007) 248-257
31. Datta S., Hettiarachchi G.H.C.M., Deng X.-W., and Holm M. Arabidopsis CONSTANS-LIKE3 is a positive regulator of red light signalling and root growth. Plant Cell 18 (2006) 70-84
32. Moon Y.H., Chae S., Jung J.Y., and An G. Expressed sequence tags of radish flower buds and characterization of a CONSTANS LIKE 1 gene. Mol. Cell 8 (1998) 452-458
33. Robert L.S., Robson F., Sharpe A., Lydiate D., and Coupland G. Conserved structure and function of the Arabidopsis flowering time gene CONSTANS in Brassica napus. Plant Mol. Biol. 37 (1998) 763-772
34. Lagerkrantz U., and Axelsson T. Rapid evolution of a family of CONSTANS LIKE genes in plants. Mol. Biol. Evol. 17 (2000) 1499-1507
35. Griffiths S., Dunford R.P., Coupland G., and Laurie D.A. The evolution of CONSTANS-like gene families in barley, rice and Arabidopsis. Plant Physiol. 131 (2003) 1855-1867
36. Kim S.J., Moon J.H., Lee I., Maeng J., and Kim S.R. Molecular cloning and expression analysis of a CONSTANS homologue, PnCOL1, from Pharbitis nil. J. Exp. Bot. 54 (2003) 1879-1887
37. Zobell O., Coupland G., and Reiss B. The family of CONSTANS-like genes in Physcomitrella patens. Plant Biol. 7 (2005) 266-275
38. Robson F., Costa M.M., Hepworth S.R., Vizir I., Pineiro M., Reeves P.H., Putterill J., and Coupland G. Functional importance of conserved domains in the flowering-time gene CONSTANS demonstrated by analysis of mutant alleles and transgenic plants. Plant J. 28 (2001) 619-631
39. Heuertz M., De Paoli E., Kallman T., Larsson H., Jurman I., Mortante M., Lascoux M., and Gyllenstrand N. Multilocus patterns of nucleotide diversity, linkage disequilibrium and demographic history of Norway spruce (Picea abies (L.) Karst). Genetics 174 (2006) 2095-2150
40. Wareing P.F. Growth studies in woody species. Physiol. Plant 7 (1954) 261-277
41. Thomas B., and Vince-Prue D. Photoperiodism in Plants (1997), Academic Press, London
42. Hodgetts R.B., Aleksiuk M.A., Brown A., Clarke C., Macdonald E., Nadeem S., Khasa D., and Macdonald E. Development of microsatellite markers for white spruce Picea glauca and related species. Theor. Appl. Genet. 102 (2001) 1252-1258
43. Triglia T. Inverse PCR (iPCR) for obtaining promoter sequence. Methods Mol. Biol. 130 (2000) 79-83
44. Rose T.M., Schultz E.R., Henikoff J.G., Pietrokovski S., McCallum C.M., and Henikoff S. Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res. 26 (1998) 1628-1635
45. Skantar A.M., and Carta L.K. Amplification of Hsp90 homologs from plant parasitic nematodes using degenerate primers and ramped annealing PCR. BioTechniques 29 (2000) 1182-1186
46. Huang J.-C., and Chen F. Simultaneous amplification of 5′ and 3′ cDNA ends based on template-switching effect and inverse PCR. BioTechniques 40 (2006) 187-189
47. Thomson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
48. Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
49. Sundas A., Tandre K., Holmstedt E., and Engstrom P. Differential gene expression during germination and after the induction of adventitious bud formation in Norway spruce embryos. Plant Mol. Biol. 18 (1992) 713-724
50. Johnsen Ø., Fossdal C.G., Nagy N., Mølmann J., Dæhlen O.G., and Skrøppa T. Climatic adaptation in Picea abies progenies is affected by the temperature during zygotic embryogenesis and seed maturation. Plant Cell Environ. 28 (2005) 1090-1102
51. Hietala A.M., Kvaalen H., Schmidt A., Jøhnk N., Solheim H., and Fossdal C.G. Temporal and spatial profiles of chitinase expression by Norway spruce in response to bark colonization by Heterobasidion annosum. Appl. Environ. Microbiol. 70 (2004) 3948-3953
52. Roche Applied Science, Technical Note No LC 13/2001.
53. Wilcoxon F. Individual comparisons by ranking methods. Biometrics 1 (1945) 80-83
54. Sokal R.R., and Rohlf F.J. Biometry: the Principles and Practice of Statistics in Biological Research. third ed. (1995), W.H. Freeman and Co., New York
55. Borden K.L.B. RING fingers and B-boxes; zinc-binding protein-protein interaction domains. Biochem. Cell Biol. 76 (1998) 351-358
56. Torok M., and Elkin L.D. Two B or not two B? Overwiew of the rapidly expanding B-box family of proteins. Differentiation 67 (2000) 63-71
57. Coupland G. Regulation of flowering by photoperiod in Arabidopsis. Plant Cell Environ. 20 (1997) 785-789
58. Bowe L.M., Coat G., and de Pamphilis C.W. Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers. Proc. Natl. Acad. Sci. U.S.A. 97 (2000) 4092-4097
59. Ledger S., Strayer C., Ashton F., Kay S.A., and Putterill J. Analysis of the function of two circadian-regulated CONSTANS-LIKE genes. Plant J. 26 (2001) 15-22
60. Roden L.C., Song H.R., Jackson S., Morris K., and Carre I.A. Floral response to photoperiod are correlated with the timing of rhythmic expression relative to dawn and dusk in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 99 (2002) 13313-13318