Molecular characterization and expression profiles of MaCOL1, a CONSTANS-like gene in banana fruit

Gene

Volumn 496, Issue 2, 2012, Pages 110-117

  Chen, Jiao ^a   Chen, Jian ye ^a   Wang, Jun ning ^b   Kuang, Jian fei ^a   Shan, Wei ^a   Lu, Wang jin ^a  

^a SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

^b GUANGDONG OCEAN UNIVERSITY   (China)

Author keywords

Banana fruit; CONSTANS; Gene expression; Ripening; Stress

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; MACOL1 PROTEIN; UNCLASSIFIED DRUG; VEGETABLE PROTEIN;

ARTICLE; BANANA; COLLETOTRICHUM; COLLETOTRICHUM MUSAE INFECTION; DNA SEQUENCE; FRUIT DEVELOPMENT; FRUIT RIPENING; HIGH TEMPERATURE; ISOELECTRIC POINT; MOLECULAR WEIGHT; MYCOSIS; NONHUMAN; OPEN READING FRAME; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN ISOLATION; SEQUENCE ALIGNMENT; TRANSCRIPTION INITIATION; YEAST; ZINC FINGER MOTIF;

AMINO ACID SEQUENCE; ARABIDOPSIS PROTEINS; COMPUTATIONAL BIOLOGY; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION; GENE EXPRESSION REGULATION, PLANT; INTERNET; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; MUSA; OPEN READING FRAMES; REAL-TIME POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION FACTORS; TRANSCRIPTIONAL ACTIVATION;

ARABIDOPSIS; COLLETOTRICHUM MUSAE;

EID: 84862805982     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2012.01.008     Document Type: Article

References (46)

1. Almada R., Cabrera N., Casaretto J.A., Ruiz-Lara S., Villanueva E.G. VvCO and VvCOL1, two CONSTANS homologous genes, are regulated during flower induction and dormancy in grapevine buds. Plant Cell Rep. 2009, 28:1193-1203.
2. Bohlenius H., Huang T., Charbonnel-Campaa L., Brunner A.M., Jansson S., Strauss S.H., Nilsson O. CO/FT regulatory module controls timing of flowering and seasonal growth cessation in trees. Science 2006, 312:1040-1043.
3. Chen J.Y., He L.H., Jiang Y.M., Wang Y., Joyce D.C., Ji Z.L., Lu W.J. Role of phenylalanine ammonia-lyase in heat pretreatment-induced chilling tolerance in banana fruit. Physiol. Plant. 2008, 132:318-328.
4. Chen L., Zhong H.Y., Kuang J.F., Li J.G., Lu W.J., Chen J.Y. Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions. Planta 2011, 234:377-390.
5. Cheng X.F., Wang Z.Y. Overexpression of COL9, a CONSTANS-LIKE gene, delays flowering by reducing expression of CO and FT in Arabidopsis thaliana. Plant J. 2005, 43:758-768.
6. Datta S., Hettiarachchi G.H., Deng X.W., Holm M. Arabidopsis CONSTANS-LIKE3 is a positive regulator of red light signaling and root growth. Plant Cell 2006, 18:70-84.
7. Drobyazina P., Khavkin E.E. The structure of two CONSTANS-LIKE1 genes in potato and its wild relatives. Gene 2011, 471:37-44.
8. Griffiths S., Dunford R.P., Coupland G., Laurie D.A. The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis. Plant Physiol. 2003, 131:1855-1867.
9. Hassidim M., Harir Y., Yakir E., Kron I., Green R.M. Over-expression of CONSTANS-LIKE 5 can induce flowering in short-day grown Arabidopsis. Planta 2009, 230:481-491.
10. Hayama R., Yokoi S., Tamaki S., Yano M., Shimamoto K. Adaptation of photoperiodic control pathways produces shortday flowering in rice. Nature 2003, 422:719-722.
11. Holefors A., Opseth L., Rosnes A.K.R., Ripel L., Snipen L., Fossdal C.G., Oisen J.E. Identification of PaCOL1 and PaCOL2, two CONSTANS-like genes showing decreased transcript levels preceding short day induced growth cessation in Norway spruce. Plant Physiol. Biochem. 2009, 47:105-115.
12. Huang G.H., Ma J.H., Han Y.Z., Chen X.J., Fu Y.F. Cloning and expression analysis of the soybean CO-Like gene GmCOL9. Plant Mol. Biol. Rep. 2011, 29:352-359.
13. Kaczorowski K.A., Quail P.H. Arabidopsis PSEUDORESPONSE REGULATOR7 is a signaling intermediate in phytochrome-regulated seedling deetiolation and phasing of the circadian clock. Plant Cell 2003, 15:2654-2665.
14. Kardailsky I., Shukla V.K., Ahn J.H., Dagenais N., Christensen S.K., Nguyen J.T., Chory J., Harrison M.J., Weigel D. Activation tagging of the floral inducer FT. Science 1999, 286:1962-1965.
15. Khanna R., Kronmiller B., Maszle D.R., Coupland G., Holm M., Mizuno T., Wu S.H. The Arabidopsis B-box zinc finger family. Plant Cell 2009, 21:3416-3420.
16. Lagercrantz U., Axelsson T. Rapid evolution of the family of CONSTANS LIKE genes in plants. Mol. Biol. Evol. 2000, 17:1499-1507.
17. Ledger S., Strayer C., Ashton F., Kay S.A., Putterill J. Analysis of the function of two circadian-regulated CONSTANS LIKE genes. Plant J. 2001, 26:15-22.
18. Liu X.J., Shiomi S., Nakatsuka A., Kubo Y., Nakamura R., Inaba A. Characterization of ethylene biosynthesis associated with ripening in banana fruit. Plant Physiol. 1999, 121:1257-1265.
19. Liu J.Y., Yu J.P., McIntosh L., Kende H., Zeevaart J.A.D. Isolation of a CONSTANS ortholog from Pharbitis nil and its role in flowering. Plant Physiol. 2001, 125:1821-1830.
20. Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T) method. Methods 2001, 25:402-408.
21. Martinez-Garcia J.F., Virgos-Soler A., Prat S. Control of photoperiod-regulated tuberization in potato by the Arabidopsis flowering-time gene CONSTANS. Proc. Natl. Acad. Sci. U. S. A. 2002, 99:5211-15216.
22. Martynov V.V., Khavkin E.E. Polymorphism of the CONSTANS gene in Brassica plants. Russ. J. Plant Physiol. 2005, 52:242-248.
23. Masaki T., Tsukagoshi H., Mitsui N., Nishii T., Hattori T., Morikami A., Nakamura K. Activation tagging of a gene for a protein with novel class of CCT-domain activates expression of a subset of sugar-inducible genes in Arabidopsis thaliana. Plant J. 2005, 43:142-152.
24. Mbéguié-A-Mbéguié D., Hubert O., Baurens F.C., Matsumoto T., Chillet M., Fils-Lycaon B., Sidibé-Bocs S. Expression patterns of cell wall-modifying genes from banana during fruit ripening and in relationship with finger drop. J. Exp. Bot. 2009, 60:2021-2034.
25. Mitsuda N., Ohme-Takagi M. Functional analysis of transcription factors in Arabidopsis. Plant Cell Physiol. 2009, 50:1232-1248.
26. Nakamichi N., Kita M., Ito S., Sato E., Yamashino T., Mizuno T. The Arabidopsis pseudo-response regulators, PRR5 and PRR7, coordinately play essential roles for circadian clock function. Plant Cell Physiol. 2005, 46:609-619.
27. Pathak N., Asif M.H., Dhawan P., Srivastava M.K., Nath P. Expression and activities of ethylene biosynthesis enzymes during ripening of banana fruits and effect of 1-MCP treatment. Plant Growth Regul. 2003, 40:11-19.
28. Pierre J.B., Bogard M., Herrmann D., Huyghe C., Julier B. A CONSTANS-like gene candidate that could explain most of the genetic variation for flowering date in Medicago truncatula. Mol. Breed. 2011, 28:25-35.
29. Putterill J., Robson F., Lee K., Simon R., Coupland G. The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors. Cell 1995, 80:847-857.
30. Ram H.Y.M., Ram M., Steward F.C. Growth and development of the banana plant. Ann. Bot. 1962, 26:657-673.
31. Riechmann J.L., Heard J., Martin G., Reuber L., Jiang C.Z., Keddie J., Adam L., Pineda O., Ratcliffe O.J., Samaha R.R., Creelman R., Pilgrim M., Broun P., Zhang J.Z., Ghandhari D., Sherman B.K., Yu G.L. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 2000, 290:2105-2110.
32. Robson F., Costa M.M., Hepworth S.R., Vizir I., Pineiro M., Reeves P.H., Putterill J., Coupland G. Functional importance of conserved domains in the flowering-time gene CONSTANS demonstrated by analysis of mutant alleles and transgenic plants. Plant J. 2001, 28:619-631.
33. Salome P.A., To J.P.C., Kieber J.J., McClung C.R. Arabidopsis response regulators ARR3 and ARR4 play cytokinin-independent roles in the control of circadian period. Plant Cell 2006, 18:55-69.
34. Samach A., Onouchi H., Gold S.E., Ditta G.S., Schwarz-Sommer Z., Yanofsky M.F., Coupland G. Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis. Science 2000, 288:1613-1616.
35. Searle I., Coupland G. Induction of flowering by seasonal changes in photoperiod. EMBO J. 2004, 23:217-1222.
36. Shimizu M., Ichikawa K., Aoki S. Photoperiod-regulated expression of the PpCOL1 gene encoding a homolog of CO/COL proteins in the moss Physcomitrella patens. Biochem. Biophys. Res. Commun. 2004, 324:1296-1301.
37. Simon R., Igeno I.M., Coupland G. Activation of floral meristem identity genes in Arabidopsis. Nature 1996, 384:59-62.
38. Suarez-Lopez P., Wheatley K., Robson F., Onouchi H., Valverde F., Coupland G. CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 2001, 410:1116-1120.
39. Sun S.J., Guo S.Q., Yang X., Bao Y.M., Tang H.J., Sun H., Huang J., Zhang H.S. Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice. J. Exp. Bot. 2010, 61:2807-2818.
40. Tiwari S.B., Shen Y., Chang H.C., Hou Y., Harris A., Ma S.F., McPartland M., Hymus G.J., Adam L., Marion C., Belachew A., Repetti P.P., Reuber T.L., Ratcliffe O.J. The flowering time regulator CONSTANS is recruited to the FLOWERING LOCUS T promoter via a unique cis-element. New Phytol. 2010, 187:57-66.
41. Valverde F. CONSTANS and the evolutionary origin of photoperiodic timing of flowering. J. Exp. Bot. 2011, 62:2453-2463.
42. Wan C.Y., Wilkins T.A. A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium hirsutum L.). Anal. Biochem. 1994, 223:7-12.
43. Yano M., Katayose Y., Ashikari M., Yamanouchi U., Monna L., Fuse T., Baba T., Yamamoto K., Umehara Y., Nagamura Y., Sasaki T. Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 2000, 12:2473-2484.
44. Yoo S.D., Cho Y.H., Sheen J. Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis. Nat. Protoc. 2007, 2:1565-1572.
45. Zhang J.X., Wu K.L., Tian L.N., Zeng S.J., Duan J. Cloning and characterization of a novel CONSTANS-like gene from Phalaenopsis hybrida. Acta Physiol. Plant. 2011, 33:409-417.
46. Zobell O., Coupland G., Reiss B. The family of CONSTANS-like genes in Physcomitrella patens. Plant Biol. 2005, 7:266-275.