The COG database: New developments in phylogenetic classification of proteins from complete genomes

Nucleic Acids Research

Volumn 29, Issue 1, 2001, Pages 22-28

  Tatusov, Roman L ^a   Natale, Darren A ^a   Garkavtsev, Igor V ^a   Tatusova, Tatiana A ^a   Shankavaram, Uma T ^a   Rao, Bachoti S ^a   Kiryutin, Boris ^a   Galperin, Michael Y ^a   Fedorova, Natalie D ^a   Koonin, Eugene V ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; PROTEIN;

AMINO ACID SEQUENCE; ARCHAEBACTERIUM; ARTICLE; BACTERIAL GENETICS; CAENORHABDITIS ELEGANS; CLASSIFICATION; COMPUTER PROGRAM; CONTROLLED STUDY; DATA BASE; DROSOPHILA MELANOGASTER; EUKARYOTE; GENE CLUSTER; GENETIC ANALYSIS; GENETIC CODE; GENOME; INFORMATION PROCESSING; INFORMATION SYSTEM; MEDICAL LITERATURE; MOLECULAR GENETICS; NEMATODE; NONHUMAN; ONLINE SYSTEM; PHYLOGENY; PRIORITY JOURNAL; PROTEIN ANALYSIS; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS; YEAST;

ANIMALS; ARCHAEA; BACTERIA; CAENORHABDITIS ELEGANS; DATABASES, FACTUAL; DROSOPHILA MELANOGASTER; GENOME; INFORMATION STORAGE AND RETRIEVAL; INTERNET; PHYLOGENY; PROTEINS; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT;

ARCHAEA; BACTERIA (MICROORGANISMS); CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER; EUKARYOTA; MELANOGASTER; SACCHAROMYCES CEREVISIAE;

EID: 0035162592     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/29.1.22     Document Type: Article

References (11)

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2. Distinguishing homologous from analogous proteins
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4. Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1
5. Genome annotation using clusters of orthologous groups of proteins (COGs)-towards understanding the first genome of a Crenarchaeon
6. Genome sequence of the nematode C. Elegans: A platform for investigating biology. The C. Elegans Sequencing Consortium
7. The genome sequence of Drosophila melanogaster
8. You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes
9. Using the COG database to improve gene recognition in complete genomes
10. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
11. Complete genomes in WWW Entrez: Data representation and analysis