The Gene Oncology (GO) database and informatics resource

Nucleic Acids Research

Volumn 32, Issue DATABASE ISS., 2004, Pages

  Harris, M A ^a   Clark, J ^a   Ireland, A ^a   Lomax, J ^a   Ashburner, M ^a,b   Foulger, R ^a,b   Eilbeck, K ^a,c   Lewis, S ^a,c   Marshall, B ^a,c   Mungall, C ^a,c   Richter, J ^a,c   Rubin, G M ^a,c   Blake, J A ^a,d   Bult, C ^a,d   Dolan, M ^a,d   Drabkin, H ^a,d   Eppig, J T ^a,d   Hill, D P ^a,d   Ni, L ^a,d   Ringwald, M ^a,d   Balakrishnan, R ^a,e   Cherry, J M ^a,e   Christie, K R ^a,e   Costanzo, M C ^a,e   Dwight, S S ^a,e   Engel, S ^a,e   Fisk, D G ^a,e   Hirschman, J E ^a,e   Hong, E L ^a,e   Nash, R S ^a,e   Sethuraman, A ^a,e   Theesfeld, C L ^a,e   Botstein, D ^a,f   Dolinski, K ^a,f   Feierbach, B ^a,f   Berardini, T ^a,g   Mundodi, S ^a,g   Rhee, S Y ^a,g   Apweiler, R ^a,h   Barrell, D ^a,h   Camon, E ^a,h   Dimmer, E ^a,h   Lee, V ^a,h   Chisholm, R ^a,i   Gaudet, P ^a,i   Kibbe, W ^a,i   Kishore, R ^a,j   Schwarz, E M ^a,j   Sternberg, P ^a,j   Gwinn, M ^a,k   Hannick, L ^a,k   Wortman, J ^a,k   Berriman, M ^a,l   Wood, V ^a,l   de la Cruz, N ^a,m   Tonellato, P ^a,m   Jaiswal, P ^a,n   Seigfried, T ^a,o   White, R ^a,p   more..

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d JACKSON LABORATORY   (United States)

^e STANFORD UNIVERSITY   (United States)

^f PRINCETON UNIVERSITY   (United States)

^g GEOPHYSICAL LABORATORY   (United States)

^h EUROPEAN BIOINFORMATICS INSTITUTE   (United Kingdom)

ⁱ NORTHWESTERN UNIVERSITY   (United States)

^j CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^k Institute for Genome Research   (United States)

^l WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^m MEDICAL COLLEGE OF WISCONSIN   (United States)

ⁿ Department of Population Medicine and Diagnostic Sciences   (United States)

^o IOWA STATE UNIVERSITY   (United States)

^p Department of Life Sciences   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT;

ACCESS TO INFORMATION; ARABIDOPSIS; ARTICLE; BIOINFORMATICS; CLASSIFICATION; COMPUTER PROGRAM; CONTROLLED STUDY; CYTOLOGY; DOCUMENTATION; DROSOPHILA MELANOGASTER; GENE FUNCTION; GENE ONTOLOGY DATABASE; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC DATABASE; GENETIC MODEL; INTERNET; MOLECULAR BIOLOGY; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

ARABIDOPSIS; DROSOPHILA MELANOGASTER; MELANOGASTER; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE;

EID: 0346801873     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (13)

1. Gruber,T.R. (1993) A translational approach to portable ontologies. Knowl. Acq., 5, 199-220.
2. Jones,D.M. and Paton,R.C. (1999) Toward principles for the representation of hierarchical knowledge in formal ontologies. Data Knowl. Eng., 31, 102-105.
3. Schulze-Kremer,S. (1998) Ontologies for molecular biology. Pac. Symp. Biocomput., 3, 695-706.
4. Stevens,R., Goble,C.A., and Bechhofer.S. (2000) Ontology-based knowledge representation for bioinformatics. Brief. Bioinform., 1, 398-414.
5. Blake,J.A. and Harris,M. (2003) The Gene Ontology Project: Structured vocabularies for molecular biology and their application to genome and expression analysis. In Baxevanis,A.D., Davison,D.B., Page,R., Stormo,G. and Stein,L. (eds), Current Protocols in Bioinformatics. Wiley and Sons, Inc., New York.
6. The Gene Ontology Consortium (2001) Creating the gene ontology resource: design and implementation. Genome Res., 11, 1425-1433.
7. The Gene Ontology Consortium (2000) Gene Ontology: tool for the unification of biology. Nature Genet., 25, 25-29.
8. Camon,E., Magrane,M., Barrell,D., Binns,D., Fleischmann,W., Kersey,P., Mulder,N., Oinn,T., Maslen,J., Cox,A. et al. (2003) The Gene Ontology Annotation (GOA) Project: Implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res., 13, 662-672.
9. Mi,H., Vandergriff,J., Campbell,M., Narechania,A., Majoros,W., Lewis,S., Thomas,P.D. and Ashburner,M. (2003) Assessment of genome-wide protein function classification for Drosophila melanogaster. Genome Res., 13, 2118-2128.
10. Pouliot,Y., Gao,J., Su,Q.J., Liu,G.G. and Ling,X.B. (2001) DIAN: a novel algorithm for genome ontological classification. Genome Res., 11, 1766-1779.
11. Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S., Nikaido,I., Osato,N., Saito,R. and Suzuki,H. et al. (2002) Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature, 420, 563-573.
12. Xie,H., Wasserman,A., Levine,Z., Novik,A., Grebinskiy,V., Shoshan,A. and Mintz,L. (2002) Large scale protein annotation through Gene Ontology. Genome Res., 12, 785-794.
13. Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F. et al. (2000) The genome sequence of Drosophila melanogaster. Science, 287, 2185-2195.