-
1
-
-
0032573579
-
Zebrafish hox clusters and vertebrate genome evolution
-
Amores A, Force A, Yan YL, Joly L, Amemiya C, et al. (1998) Zebrafish hox clusters and vertebrate genome evolution. Science 282: 1711-1714.
-
(1998)
Science
, vol.282
, pp. 1711-1714
-
-
Amores, A.1
Force, A.2
Yan, Y.L.3
Joly, L.4
Amemiya, C.5
Et al.6
-
2
-
-
4143134848
-
Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish
-
Hoegg S, Brinkmann H, Taylor JS, Meyer A (2004) Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish. Journal of Molecular Evolution 59: 190-203.
-
(2004)
Journal of Molecular Evolution
, vol.59
, pp. 190-203
-
-
Hoegg, S.1
Brinkmann, H.2
Taylor, J.S.3
Meyer, A.4
-
3
-
-
0030878664
-
Fossils, genes and the evolution of animal limbs
-
Shubin N, Tabin C, Carroll S (1997) Fossils, genes and the evolution of animal limbs. Nature 388: 639-648.
-
(1997)
Nature
, vol.388
, pp. 639-648
-
-
Shubin, N.1
Tabin, C.2
Carroll, S.3
-
4
-
-
34548349451
-
Do Reefs Drive Diversification in Marine Teleosts? Evidence from the Pufferfish and Their Allies (Order Tetraodontiformes)
-
Alfaro ME, Santini F, Brock CD (2007) Do Reefs Drive Diversification in Marine Teleosts? Evidence from the Pufferfish and Their Allies (Order Tetraodontiformes). Evolution 61: 2104-2126.
-
(2007)
Evolution
, vol.61
, pp. 2104-2126
-
-
Alfaro, M.E.1
Santini, F.2
Brock, C.D.3
-
5
-
-
84863724890
-
Apparent signal of competition limiting diversification after ecological transitions from marine to freshwater habitats
-
Betancur R.R, Ortí G, Stein AM, Marceniuk AP, Pyron RA (2012) Apparent signal of competition limiting diversification after ecological transitions from marine to freshwater habitats. Ecol Lett 15: 822-830.
-
(2012)
Ecol Lett
, vol.15
, pp. 822-830
-
-
Betancur, R.R.1
Ortí, G.2
Stein, A.M.3
Marceniuk, A.P.4
Pyron, R.A.5
-
7
-
-
33748564638
-
Comparative phylogenetic analysis of male alternative reproductive tactics in ray-finned fishes
-
Mank J, Avise J (2006) Comparative phylogenetic analysis of male alternative reproductive tactics in ray-finned fishes. Evolution 60: 1311-1316.
-
(2006)
Evolution
, vol.60
, pp. 1311-1316
-
-
Mank, J.1
Avise, J.2
-
9
-
-
9944225115
-
Insights into neural mechanisms and evolution of behavior from electric fish
-
Rose GJ (2004) Insights into neural mechanisms and evolution of behavior from electric fish. Nature Reviews Neuroscience 5: 943-951.
-
(2004)
Nature Reviews Neuroscience
, vol.5
, pp. 943-951
-
-
Rose, G.J.1
-
10
-
-
0035826690
-
Evolution of vertebrate steroid receptors from an ancestral estrogen receptor by ligand exploitation and serial genome expansions
-
Thornton JW (2001) Evolution of vertebrate steroid receptors from an ancestral estrogen receptor by ligand exploitation and serial genome expansions. PNAS 98: 5671-5676.
-
(2001)
PNAS
, vol.98
, pp. 5671-5676
-
-
Thornton, J.W.1
-
11
-
-
78651364104
-
Evolution of ligand specificity in vertebrate corticosteroid receptors
-
Arterbery AS, Fergus DJ, Fogarty EA, Mayberry J, Deitcher DL, et al. (2011) Evolution of ligand specificity in vertebrate corticosteroid receptors. BMC Evolutionary Biology 11: 14.
-
(2011)
BMC Evolutionary Biology
, vol.11
, pp. 14
-
-
Arterbery, A.S.1
Fergus, D.J.2
Fogarty, E.A.3
Mayberry, J.4
Deitcher, D.L.5
Et al.6
-
12
-
-
84866152524
-
Adaptive evolution of voltage-gated sodium channels: The first 800 million years
-
Zakon HH (2012) Adaptive evolution of voltage-gated sodium channels: The first 800 million years. Proc Natl Acad Sci USA 109: 10619-10625.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 10619-10625
-
-
Zakon, H.H.1
-
13
-
-
80051914599
-
Three periods of regulatory innovation during vertebrate evolution
-
Lowe CB, Kellis M, Siepel A, Raney BJ, Clamp M, et al. (2011) Three periods of regulatory innovation during vertebrate evolution. Science 333: 1019-1024.
-
(2011)
Science
, vol.333
, pp. 1019-1024
-
-
Lowe, C.B.1
Kellis, M.2
Siepel, A.3
Raney, B.J.4
Clamp, M.5
Et al.6
-
14
-
-
33749325080
-
Genomic Evolution of Hox Gene Clusters
-
Lemons D, McGinnis W (2006) Genomic Evolution of Hox Gene Clusters. Science 313: 1918-1922.
-
(2006)
Science
, vol.313
, pp. 1918-1922
-
-
Lemons, D.1
McGinnis, W.2
-
16
-
-
0000132920
-
Lungfishes, tetrapods, paleontology, and plesiomorphy
-
Rosen DE, Forey PL, Gardiner BG, Patterson C (1981) Lungfishes, tetrapods, paleontology, and plesiomorphy. Bull Amer Mus Nat Hist 167: 159-276.
-
(1981)
Bull Amer Mus Nat Hist
, vol.167
, pp. 159-276
-
-
Rosen, D.E.1
Forey, P.L.2
Gardiner, B.G.3
Patterson, C.4
-
17
-
-
1842737743
-
Nuclear protein-coding genes support lungfish and not the coelacanth as the closest living relatives of land vertebrates
-
Brinkmann H, Venkatesh B, Brenner S, Meyer A (2004) Nuclear protein-coding genes support lungfish and not the coelacanth as the closest living relatives of land vertebrates. Proc Natl Acad Sci USA 101: 4900-4905.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 4900-4905
-
-
Brinkmann, H.1
Venkatesh, B.2
Brenner, S.3
Meyer, A.4
-
18
-
-
0037814523
-
Interrelationships of basal osteichthyans
-
In: P A, editor, London: Taylor & Francis
-
Zhu M, Schultze H-P (2001) Interrelationships of basal osteichthyans. In: P A, editor. Major Events in Early Vertebrate Evolution. London: Taylor & Francis. pp. 289-314.
-
(2001)
Major Events In Early Vertebrate Evolution
, pp. 289-314
-
-
Zhu, M.1
Schultze, H.-P.2
-
19
-
-
0000007805
-
Interrelationships of holosteans
-
In: Greenwood PH, Miles RS, Patterson C, editors, London: Academic Press
-
Patterson C (1973) Interrelationships of holosteans. In: Greenwood PH, Miles RS, Patterson C, editors. Interrelationships of fishes. London: Academic Press. pp. 233-305.
-
(1973)
Interrelationships of Fishes
, pp. 233-305
-
-
Patterson, C.1
-
20
-
-
0002994515
-
Review of ichthyodectiform and other Mesozoic teleost fishes and the theory and practice of classifying fossils
-
Patterson C, Rosen DE (1977) Review of ichthyodectiform and other Mesozoic teleost fishes and the theory and practice of classifying fossils. Bulletin of the American Museum of Natural History 158: 83-172.
-
(1977)
Bulletin of the American Museum of Natural History
, vol.158
, pp. 83-172
-
-
Patterson, C.1
Rosen, D.E.2
-
21
-
-
0001619866
-
Phyletic studies of teleostean fishes, with a provisional classification of living forms
-
Greenwood PH, Rosen D, Weitzman SH, Meyers GS (1966) Phyletic studies of teleostean fishes, with a provisional classification of living forms. Bulletin of the American Museum of Natural History 131: 339-456.
-
(1966)
Bulletin of the American Museum of Natural History
, vol.131
, pp. 339-456
-
-
Greenwood, P.H.1
Rosen, D.2
Weitzman, S.H.3
Meyers, G.S.4
-
22
-
-
70349201094
-
Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes
-
Santini F, Harmon LJ, Carnevale G, Alfaro ME (2009) Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes. BMC Evolutionary Biology 9: 194.
-
(2009)
BMC Evolutionary Biology
, vol.9
, pp. 194
-
-
Santini, F.1
Harmon, L.J.2
Carnevale, G.3
Alfaro, M.E.4
-
23
-
-
33644859481
-
Gnathostome fishes
-
In: Cracraft J, Donoghue MJ, editors, New York: Oxford University Press
-
Stiassny MLJ, Wiley EO, Johnson GD, de Carvalho MR (2004) Gnathostome fishes. In: Cracraft J, Donoghue MJ, editors. Assembling the Tree of Life. New York: Oxford University Press. pp. 410-429.
-
(2004)
Assembling the Tree of Life
, pp. 410-429
-
-
Stiassny, M.L.J.1
Wiley, E.O.2
Johnson, G.D.3
de Carvalho, M.R.4
-
25
-
-
77957701580
-
A teleost classification based on monophyletic groups
-
In: Nelson JS, Schultze H-P, Wilson MVH, editors, München: Verlag Dr. Friedrich Pfeil
-
Wiley EO, Johnson GD (2010) A teleost classification based on monophyletic groups. In: Nelson JS, Schultze H-P, Wilson MVH, editors. Origin and Phylogenetic Interrelationships of Teleosts. München: Verlag Dr. Friedrich Pfeil. pp. 123-182.
-
(2010)
Origin and Phylogenetic Interrelationships of Teleosts
, pp. 123-182
-
-
Wiley, E.O.1
Johnson, G.D.2
-
26
-
-
77958119954
-
Phylogeny of teleosts based on mitochondrial DNA sequences
-
In: Nelson JS, Schultze H-P, Wilson MVH, editors, München: Verlag Dr. Friedrich Pfeil
-
Broughton RE (2010) Phylogeny of teleosts based on mitochondrial DNA sequences. In: Nelson JS, Schultze H-P, Wilson MVH, editors. Origin and Phylogenetic Interrelationships of Teleosts. München: Verlag Dr. Friedrich Pfeil. pp. 61-76.
-
(2010)
Origin and Phylogenetic Interrelationships of Teleosts
, pp. 61-76
-
-
Broughton, R.E.1
-
27
-
-
34249943401
-
A new time-scale for ray-finned fish evolution
-
Hurley IS, Lockridge-Mueller R, Dunn KA, Schmidt EJ, Friedman M, et al. (2007) A new time-scale for ray-finned fish evolution. Proceedings of the Royal Society, Series B 274: 489-498.
-
(2007)
Proceedings of the Royal Society, Series B
, vol.274
, pp. 489-498
-
-
Hurley, I.S.1
Lockridge-Mueller, R.2
Dunn, K.A.3
Schmidt, E.J.4
Friedman, M.5
Et al.6
-
28
-
-
27744471702
-
Early diversification of actinopterygians
-
In: Arratia G, Wilson MVH, Cloutier R, editors, Verlag Dr. Friedrich Pfeil
-
Cloutier R, Arratia G (2004) Early diversification of actinopterygians. In: Arratia G, Wilson MVH, Cloutier R, editors. Recent Advances in the Origin and Early Radiation of Vertebrates Munchen: Verlag Dr. Friedrich Pfeil.
-
(2004)
Recent Advances In the Origin and Early Radiation of Vertebrates Munchen
-
-
Cloutier, R.1
Arratia, G.2
-
29
-
-
12244307474
-
Basal actinopterygian relationships: A mitogenomic perspective on the phylogeny of the ancient fish
-
Inoue JG, Miya M, Tsukamoto K, Nishida M (2003) Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the ancient fish. Molecular Phylogenetics and Evolution 26: 110-120.
-
(2003)
Molecular Phylogenetics and Evolution
, vol.26
, pp. 110-120
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
30
-
-
17044393500
-
The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths
-
Inoue JG, Miya M, Venkatesh B, Nishida M (2005) The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths. Gene 349: 227-235.
-
(2005)
Gene
, vol.349
, pp. 227-235
-
-
Inoue, J.G.1
Miya, M.2
Venkatesh, B.3
Nishida, M.4
-
31
-
-
84865302928
-
Resolution of ray-finned fish phylogeny and timing of diversification
-
Near TJ, Eytan RI, Dornburg A, Kuhn KL, Moore JA, et al. (2012) Resolution of ray-finned fish phylogeny and timing of diversification. Proc Natl Acad Sci U S A 109: 13698-13703.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 13698-13703
-
-
Near, T.J.1
Eytan, R.I.2
Dornburg, A.3
Kuhn, K.L.4
Moore, J.A.5
Et al.6
-
32
-
-
84867187121
-
Integrating multi-origin expression data improves the resolution of deep phylogeny of ray-finned fish (Actinopterygii)
-
Zou M, Guo B, Tao W, Arratia G, He S (2012) Integrating multi-origin expression data improves the resolution of deep phylogeny of ray-finned fish (Actinopterygii). Scientific Reports 2.
-
(2012)
Scientific Reports
, vol.2
-
-
Zou, M.1
Guo, B.2
Tao, W.3
Arratia, G.4
He, S.5
-
33
-
-
80051924238
-
-
IUCN, version 2010.1 Table 1. International Union for Conservation of Nature
-
IUCN (2010) IUCN Red List version 2010.1 Table 1. International Union for Conservation of Nature.
-
(2010)
IUCN Red List
-
-
-
34
-
-
12044251396
-
Comparison of hypotheses on the relationships of sarcopterygians
-
Schultze H-P (1994) Comparison of hypotheses on the relationships of sarcopterygians. Systematic Biology 43: 155-173.
-
(1994)
Systematic Biology
, vol.43
, pp. 155-173
-
-
Schultze, H.-P.1
-
35
-
-
33751039720
-
Bushes in the tree of life
-
Rokas A, Carroll SB (2006) Bushes in the tree of life. PLoS Biology 4: 1899-1904.
-
(2006)
PLoS Biology
, vol.4
, pp. 1899-1904
-
-
Rokas, A.1
Carroll, S.B.2
-
36
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
Felsenstein J (1978) Cases in which parsimony or compatibility methods will be positively misleading. Systematic Zoology 27: 401-410.
-
(1978)
Systematic Zoology
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
37
-
-
33947659375
-
A practical approach to phylogenomics: The phylogeny of ray-finned fish (Actinopterygii) as a case study
-
Li C, Ortí G, Zhang G, Lu G (2007) A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study. BMC Evolutionary Biology 7: 44.
-
(2007)
BMC Evolutionary Biology
, vol.7
, pp. 44
-
-
Li, C.1
Ortí, G.2
Zhang, G.3
Lu, G.4
-
38
-
-
3242720295
-
Basal jawed vertebrate phylogeny inferred from multiple nuclear DNA-coded genes
-
Kikugawa K, Katoh K, Kuraku S, Sakurai H, Ishida O, et al. (2004) Basal jawed vertebrate phylogeny inferred from multiple nuclear DNA-coded genes. BMC Biology 2: 1-11.
-
(2004)
BMC Biology
, vol.2
, pp. 1-11
-
-
Kikugawa, K.1
Katoh, K.2
Kuraku, S.3
Sakurai, H.4
Ishida, O.5
Et al.6
-
39
-
-
0035949652
-
Molecular synapomorphies resolve evolutionary relationships of extatn jawed vertebrates
-
Venkatesh B, Erdmann MV, Brenner SE (2001) Molecular synapomorphies resolve evolutionary relationships of extatn jawed vertebrates. Proc Natl Acad Sci U S A 98: 11382-11387.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 11382-11387
-
-
Venkatesh, B.1
Erdmann, M.V.2
Brenner, S.E.3
-
41
-
-
0000232117
-
Dialipina and the characters of basal actinopterygians
-
In: Ahlberg PE, editor, London: Taylor & Francis
-
Schultze H-P, Cumbaa S (2001) Dialipina and the characters of basal actinopterygians. In: Ahlberg PE, editor. Major events in Early Vertebrate Evolution, Paleontology, Phylogeny, Genetics and Development. London: Taylor & Francis. pp. 315-332.
-
(2001)
Major Events In Early Vertebrate Evolution, Paleontology, Phylogeny, Genetics and Development
, pp. 315-332
-
-
Schultze, H.-P.1
Cumbaa, S.2
-
43
-
-
0000924060
-
The skull and pectoral girdle of the parasemionotid fish Watsonulus eugnathoides from the early Triassic Sakamena Group of Madagascar, with comments on the relationships of the holostean fishes
-
Olsen PE (1984) The skull and pectoral girdle of the parasemionotid fish Watsonulus eugnathoides from the early Triassic Sakamena Group of Madagascar, with comments on the relationships of the holostean fishes. Journal Vertebrate Paleontology 4: 481-499.
-
(1984)
Journal Vertebrate Paleontology
, vol.4
, pp. 481-499
-
-
Olsen, P.E.1
-
44
-
-
0035542539
-
The sister-group of Teleostei: Consensus and disagreements
-
Arratia G (2001) The sister-group of Teleostei: consensus and disagreements. Journal of Vertebrate Paleontology 21: 767-773.
-
(2001)
Journal of Vertebrate Paleontology
, vol.21
, pp. 767-773
-
-
Arratia, G.1
-
45
-
-
47249090871
-
Optimal Data Partitioning and a Test Case for Ray-Finned Fishes (Actinopterygii) Based on Ten Nuclear Loci
-
Li C, Lu G, Orti G (2008) Optimal Data Partitioning and a Test Case for Ray-Finned Fishes (Actinopterygii) Based on Ten Nuclear Loci. SystBiol 57: 519-539.
-
(2008)
SystBiol
, vol.57
, pp. 519-539
-
-
Li, C.1
Lu, G.2
Orti, G.3
-
47
-
-
0002285816
-
Teleostean monophyly
-
In: Stiassny MLJ, Parenti LR, Johnson.G.D., editors, New York: Academic
-
de Pinna MCC (1996) Teleostean monophyly. In: Stiassny MLJ, Parenti LR, Johnson.G.D., editors. Interrelationships of fishes. New York: Academic. pp. 147-162.
-
(1996)
Interrelationships of Fishes
, pp. 147-162
-
-
de Pinna, M.C.C.1
-
48
-
-
0000960535
-
The monophyly of telostei and stem-group teleosts
-
In: Arratia G, Schultze H-P, editors, Munchen: Pfeil
-
Arratia G (1999) The monophyly of telostei and stem-group teleosts. In: Arratia G, Schultze H-P, editors. Mesozoic Fishes 2: Systematics and Fossil Record. Munchen: Pfeil. pp. 265-334.
-
(1999)
Mesozoic Fishes 2: Systematics and Fossil Record
, pp. 265-334
-
-
Arratia, G.1
-
49
-
-
0007344437
-
New teleostean fishes from southern Germany and the systematic problems concerning the pholidophoriforms
-
Arratia G (2000) New teleostean fishes from southern Germany and the systematic problems concerning the pholidophoriforms. Paläontol Z 74: 113-143.
-
(2000)
Paläontol Z
, vol.74
, pp. 113-143
-
-
Arratia, G.1
-
50
-
-
0344795369
-
Phylogenetic relationships of Teleostei. Past and present
-
Arratia G (2000) Phylogenetic relationships of Teleostei. Past and present. Estudios Oceanologicos 19: 19-51.
-
(2000)
Estudios Oceanologicos
, vol.19
, pp. 19-51
-
-
Arratia, G.1
-
51
-
-
84871006014
-
Critical analysis of the impact of fossils on teleostean phylogenies, especially that of basal teleosts
-
In: Elliott D, Maisey J, Yu Y, Miao D, editors, München: Verlag Dr. F. Pfeil
-
Arratia G (2010) Critical analysis of the impact of fossils on teleostean phylogenies, especially that of basal teleosts. In: Elliott D, Maisey J, Yu Y, Miao D, editors. Morphology, Phylogeny and Paleobiogeography of Fossil Fishes. München: Verlag Dr. F. Pfeil. pp. 247-274.
-
(2010)
Morphology, Phylogeny and Paleobiogeography of Fossil Fishes
, pp. 247-274
-
-
Arratia, G.1
-
52
-
-
0034904214
-
A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences
-
Inoue J, Miya M, Tsukamoto K, Nishida M (2001) A mitogenomic perspective on the basal teleostean phylogeny: resolving higher-level relationships with longer DNA sequences. Molecular Phylogenetics and Evolution 20: 275-285.
-
(2001)
Molecular Phylogenetics and Evolution
, vol.20
, pp. 275-285
-
-
Inoue, J.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
53
-
-
0027564167
-
A 28S rRNA-based phylogeny of the gnathostomes: First steps in the analysis of conflict and congruence with morphologically based cladograms
-
Le HLV, Lecointre G, Perasso R (1993) A 28S rRNA-based phylogeny of the gnathostomes: first steps in the analysis of conflict and congruence with morphologically based cladograms. Molecular Phylogenetics and Evolution 2: 31-51.
-
(1993)
Molecular Phylogenetics and Evolution
, vol.2
, pp. 31-51
-
-
Le, H.L.V.1
Lecointre, G.2
Perasso, R.3
-
57
-
-
0003285088
-
The caudal skeleton of Jurassic teleosts; a phylogenetic analysis
-
In: Chang M-m, Liu Y-h, G.-r. Z, editors, Beijing: Science Press
-
Arratia G (1991) The caudal skeleton of Jurassic teleosts; a phylogenetic analysis. In: Chang M-m, Liu Y-h, G.-r. Z, editors. Early Vertebrates and Related Problems of Evolutionary Biology. Beijing: Science Press. pp. 249-340.
-
(1991)
Early Vertebrates and Related Problems of Evolutionary Biology
, pp. 249-340
-
-
Arratia, G.1
-
58
-
-
64949146217
-
Actinopterygian postcranial skeleton with special reference to the diversity of fin ray elements, and the prolem of identifying homologies
-
In: Arratia G, Schultze H-P, Wilson MVH, editors, München: Verlag Dr. F. Pfeil
-
Arratia G (2008) Actinopterygian postcranial skeleton with special reference to the diversity of fin ray elements, and the prolem of identifying homologies. In: Arratia G, Schultze H-P, Wilson MVH, editors. Mesozoic Fishes 4 - Homology and Phylogeny. München: Verlag Dr. F. Pfeil. pp. 49-101.
-
(2008)
Mesozoic Fishes 4 - Homology and Phylogeny
, pp. 49-101
-
-
Arratia, G.1
-
60
-
-
26444482460
-
Molecular Phylogeny and Divergence Times of Deuterostome Animals
-
Blair JE, Hedges SB (2005) Molecular Phylogeny and Divergence Times of Deuterostome Animals. Molecular Biology and Evolution 22: 2275-2284.
-
(2005)
Molecular Biology and Evolution
, vol.22
, pp. 2275-2284
-
-
Blair, J.E.1
Hedges, S.B.2
-
61
-
-
49249122999
-
Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences
-
Azuma Y, Kumazawa Y, Miya M, Mabuchi K, Nishida M (2008) Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences. BMC Evolutionary Biology: 215-228.
-
(2008)
BMC Evolutionary Biology
, pp. 215-228
-
-
Azuma, Y.1
Kumazawa, Y.2
Miya, M.3
Mabuchi, K.4
Nishida, M.5
-
62
-
-
84861007194
-
Comparable ages for the independent origins of electrogenesis in African and South American weakly electric fishes
-
Lavoue S, Miya M, Arnegard ME, Sullivan JP, Hopkins CD, et al. (2012) Comparable ages for the independent origins of electrogenesis in African and South American weakly electric fishes. PLOS One 7.
-
(2012)
PLOS One
, vol.7
-
-
Lavoue, S.1
Miya, M.2
Arnegard, M.E.3
Sullivan, J.P.4
Hopkins, C.D.5
Et al.6
-
64
-
-
34249731438
-
Molecular phylogeny of Clupeiformes (Actinopterygii) inferred from nuclear and mitochondrial DNA sequences
-
Li C, Ortí G (2007) Molecular phylogeny of Clupeiformes (Actinopterygii) inferred from nuclear and mitochondrial DNA sequences. Molecular Phylogenetics and Evolution 44: 386-398.
-
(2007)
Molecular Phylogenetics and Evolution
, vol.44
, pp. 386-398
-
-
Li, C.1
Ortí, G.2
-
67
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
68
-
-
84860109324
-
MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, et al. (2012) MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542.
-
(2012)
Systematic Biology
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
Et al.6
-
69
-
-
84861380450
-
PartitionFinder: Combined selection of partitioning schemes and substitution models for phylogenetic analyses
-
Lanfear R, Calcott B, Ho SYW, Guindon S PartitionFinder: Combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol Biol Evol 29: 1695-1701.
-
Mol Biol Evol
, vol.29
, pp. 1695-1701
-
-
Lanfear, R.1
Calcott, B.2
Ho, S.Y.W.3
Guindon, S.4
-
70
-
-
63549118031
-
STEM: Species tree estimation using maximum likelihood for gene trees under coalescence
-
Kubatko LS, Carstens BC, Knowles LL (2009) STEM: species tree estimation using maximum likelihood for gene trees under coalescence. Bioinformatics 25: 971-973.
-
(2009)
Bioinformatics
, vol.25
, pp. 971-973
-
-
Kubatko, L.S.1
Carstens, B.C.2
Knowles, L.L.3
-
71
-
-
0031504952
-
Gene trees in species trees
-
Maddison WP (1997) Gene trees in species trees. Systematic Biology 46: 523-536.
-
(1997)
Systematic Biology
, vol.46
, pp. 523-536
-
-
Maddison, W.P.1
-
73
-
-
70349425459
-
Estimating species phylogenies using coalescence times among sequences
-
Liu L, Yu L, Pearl DK, Edwards SV (2009) Estimating species phylogenies using coalescence times among sequences. Systematic Biology 58: 468-477.
-
(2009)
Systematic Biology
, vol.58
, pp. 468-477
-
-
Liu, L.1
Yu, L.2
Pearl, D.K.3
Edwards, S.V.4
-
74
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 7: 214.
-
(2007)
BMC Evolutionary Biology
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
75
-
-
70350103638
-
Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times
-
Ho SYW, Phillips MJ (2009) Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times. Systematic Biology 58: 367-380.
-
(2009)
Systematic Biology
, vol.58
, pp. 367-380
-
-
Ho, S.Y.W.1
Phillips, M.J.2
-
76
-
-
84555194967
-
Evaluating fossil calibrations for dating phylogenies in light of rates of molecular evolution: A comparison of three approaches
-
Lukoscheck V, Keogh JS, Avise JC (2012) Evaluating fossil calibrations for dating phylogenies in light of rates of molecular evolution: a comparison of three approaches. SystBiol 61: 22-43.
-
(2012)
SystBiol
, vol.61
, pp. 22-43
-
-
Lukoscheck, V.1
Keogh, J.S.2
Avise, J.C.3
-
77
-
-
0001067192
-
Morphology and interrelationships of primitive actinopterygian fishes
-
Patterson C (1982) Morphology and interrelationships of primitive actinopterygian fishes. American Zoologist 22: 241-259.
-
(1982)
American Zoologist
, vol.22
, pp. 241-259
-
-
Patterson, C.1
-
78
-
-
13644273302
-
Peixes do Albiano-Cenomaniano do Grupo Itapecuru no estado do Maranhão, Brasil
-
In: Rossett DF, Góes AM, Truckenbrodt T, editors, MPEQ
-
Dutra MFA, Malabarba CSL (2001) Peixes do Albiano-Cenomaniano do Grupo Itapecuru no estado do Maranhão, Brasil. In: Rossett DF, Góes AM, Truckenbrodt T, editors. O Cretáceo da Bacia de São Luis-Grajaú, MPEQ. pp. 191-208.
-
(2001)
O Cretáceo Da Bacia De São Luis-Grajaú
, pp. 191-208
-
-
Dutra, M.F.A.1
Malabarba, C.S.L.2
-
79
-
-
0002309612
-
An overview of the freshwater fish fauna from the Kem Kem beds (Late Cretaceous: Cenomanian) of southeast Morocco
-
In: Arratia G, Schultze H-P, editors, München: Verlag Dr. F. Pfeil
-
Dutheil DB (1999) An overview of the freshwater fish fauna from the Kem Kem beds (Late Cretaceous: Cenomanian) of southeast Morocco. In: Arratia G, Schultze H-P, editors. Mesozoic Fishes 2- Systematics and Fossil Record. München: Verlag Dr. F. Pfeil. pp. 553-563.
-
(1999)
Mesozoic Fishes 2- Systematics and Fossil Record
, pp. 553-563
-
-
Dutheil, D.B.1
-
80
-
-
0036211485
-
Diversification of Polypteriformes and special comparisosn with Lepisosteiformes
-
Gayet M, Meunier FJ (2002) Diversification of Polypteriformes and special comparisosn with Lepisosteiformes. Paleontology 45: 361-376.
-
(2002)
Paleontology
, vol.45
, pp. 361-376
-
-
Gayet, M.1
Meunier, F.J.2
-
81
-
-
70350116756
-
Calibrating and constraining molecular clocks
-
In: Hedges SB, Kumar S, editors, Oxford: Oxford University Press
-
Benton MJ, Donoghue PCJ, Asher RJ (2009) Calibrating and constraining molecular clocks. In: Hedges SB, Kumar S, editors. The Timetree of Life. Oxford: Oxford University Press. pp. 35-86.
-
(2009)
The Timetree of Life
, pp. 35-86
-
-
Benton, M.J.1
Donoghue, P.C.J.2
Asher, R.J.3
-
82
-
-
34547613512
-
Jaws and teeth of the earliest bony fishes
-
Botella H, Blom H, Dorka M, Ahlberg PE, Janvier P (2007) Jaws and teeth of the earliest bony fishes. Nature 448: 585-586.
-
(2007)
Nature
, vol.448
, pp. 585-586
-
-
Botella, H.1
Blom, H.2
Dorka, M.3
Ahlberg, P.E.4
Janvier, P.5
-
83
-
-
0000174274
-
Morphology, characters, and the interrelationships of basal sarcopterygians
-
In: Stiassny MLJ, Parenti LR, Johnson GD, editors, San Diego: Academic Press
-
Cloutier R, Ahlberg PE (1996) Morphology, characters, and the interrelationships of basal sarcopterygians. In: Stiassny MLJ, Parenti LR, Johnson GD, editors. Interrelationships of fishes. San Diego: Academic Press. pp. 445-479.
-
(1996)
Interrelationships of Fishes
, pp. 445-479
-
-
Cloutier, R.1
Ahlberg, P.E.2
-
84
-
-
84978866020
-
Lungfish neural characters and their bearing on sarcoptergian phylogeny
-
In: Bemis WE, Burggren WW, Kemp NE, editors, New York: Alan R Liss
-
Northcutt RG (1986) Lungfish neural characters and their bearing on sarcoptergian phylogeny. In: Bemis WE, Burggren WW, Kemp NE, editors. The biology and evolution of lungfishes. New York: Alan R Liss. pp. 277-297.
-
(1986)
The Biology and Evolution of Lungfishes
, pp. 277-297
-
-
Northcutt, R.G.1
-
85
-
-
0003132076
-
The lungfish, the coelacanth and the cow revisited
-
In: Schultze HP TL, editor, New York: Cornell University Press
-
Forey PL, Gardiner BG, Patterson C (1991) The lungfish, the coelacanth and the cow revisited. In: Schultze HP TL, editor. Origins of the higher groups of tetrapods: controversy consensus. New York: Cornell University Press. pp. 145-172.
-
(1991)
Origins of the Higher Groups of Tetrapods: Controversy Consensus
, pp. 145-172
-
-
Forey, P.L.1
Gardiner, B.G.2
Patterson, C.3
-
86
-
-
3242743113
-
the phylogenetic relationship of tetrapod, coelacanth, and lungfish revealed by the sequences of forty-four nuclear genes
-
Takezaki N, Figueroa F, Zaleska-Rutczynska Z, Takahata N, Klein J (2004) the phylogenetic relationship of tetrapod, coelacanth, and lungfish revealed by the sequences of forty-four nuclear genes. Molecular Biology and Evolution 21: 1512-1524.
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 1512-1524
-
-
Takezaki, N.1
Figueroa, F.2
Zaleska-Rutczynska, Z.3
Takahata, N.4
Klein, J.5
-
87
-
-
79952345833
-
43 genes support the lungfish-coelacanth grouping related to the closest living relative of tetrapods with the Bayesian method under the coalescence model
-
Shan Y, Gras R (2011) 43 genes support the lungfish-coelacanth grouping related to the closest living relative of tetrapods with the Bayesian method under the coalescence model. BMC Research Notes 4: 49.
-
(2011)
BMC Research Notes
, vol.4
, pp. 49
-
-
Shan, Y.1
Gras, R.2
-
88
-
-
0001932614
-
A new rhizodontiform fish from the Early Carboniferous of Victoria, Australia, with remarks on the phylogenetic position of the group
-
Long JA (1989) A new rhizodontiform fish from the Early Carboniferous of Victoria, Australia, with remarks on the phylogenetic position of the group. Journal of Vertebrate Paleontology 9: 1-17.
-
(1989)
Journal of Vertebrate Paleontology
, vol.9
, pp. 1-17
-
-
Long, J.A.1
-
89
-
-
0031284411
-
The oldest actinopterygian fish
-
M, Schultze H-P (1997) The oldest actinopterygian fish. Lethaia 30: 293-304.
-
(1997)
Lethaia
, vol.30
, pp. 293-304
-
-
Schultze, H.-P.M.1
-
91
-
-
0003182066
-
A re-examination of sarcopterygian interrelationships, with special reference to the Porolepiformes
-
Ahlberg P (1991) A re-examination of sarcopterygian interrelationships, with special reference to the Porolepiformes. Zoological Journal Linnean Society 103: 241-287.
-
(1991)
Zoological Journal Linnean Society
, vol.103
, pp. 241-287
-
-
Ahlberg, P.1
-
92
-
-
84860299854
-
Earliest known coelacanth skull extends the range of anatomically modern coelacanths to the Early Devonian
-
Zhu M, Yu X, Lu J, Qiao T, Zhao W, et al. (2012) Earliest known coelacanth skull extends the range of anatomically modern coelacanths to the Early Devonian. Nature Communications 3: 772.
-
(2012)
Nature Communications
, vol.3
, pp. 772
-
-
Zhu, M.1
Yu, X.2
Lu, J.3
Qiao, T.4
Zhao, W.5
Et al.6
-
93
-
-
0032330518
-
A new porolepiform-like fish, Psarolepis romeri, gen. et ap. nov. (Sarcopterygiii, Osteichthyes) from the Lower Devonian of Yunnan, China
-
Yu X (1998) A new porolepiform-like fish, Psarolepis romeri, gen. et ap. nov. (Sarcopterygiii, Osteichthyes) from the Lower Devonian of Yunnan, China. Journal Vertebrate Paleontology 18: 261-274.
-
(1998)
Journal Vertebrate Paleontology
, vol.18
, pp. 261-274
-
-
Yu, X.1
-
95
-
-
0000059927
-
Gill arches and the phylogeny of fishes, with notes on the classification of vertebrates
-
Nelson G (1969) Gill arches and the phylogeny of fishes, with notes on the classification of vertebrates. Bulletin of the American Museum of Natural History 141: 475-552.
-
(1969)
Bulletin of the American Museum of Natural History
, vol.141
, pp. 475-552
-
-
Nelson, G.1
-
96
-
-
0001807749
-
Interrelationships of actinopterygians and brachiopterygians: Evidence from pectoral anatomy
-
In: Greenwood PH, Miles RS, Patterson C, editors, London: Academic Press
-
Jessen HL (1973) Interrelationships of actinopterygians and brachiopterygians: Evidence from pectoral anatomy. In: Greenwood PH, Miles RS, Patterson C, editors. Interrelationships of Fishes. London: Academic Press. pp. 227-232.
-
(1973)
Interrelationships of Fishes
, pp. 227-232
-
-
Jessen, H.L.1
-
97
-
-
84876318017
-
Actionopterygii
-
In: Piveteau J, editor, Paris: Masson et Cie
-
Lehman P (1966) Actionopterygii. In: Piveteau J, editor. Traité de Paléontologie IV, vol 3: Zhu Actinoptérygiens, Crossoptérygiens, Dipneustes. Paris: Masson et Cie.
-
(1966)
Traité De Paléontologie IV, Vol 3: Zhu Actinoptérygiens, Crossoptérygiens, Dipneustes
-
-
Lehman, P.1
-
98
-
-
85010583662
-
A comprehensive phylogenetic study of amiid fishes (Amiidae) based on comparative skeletal anatomy. An empirical search for interconnected patterns of natural history
-
Grande L, Bemis W (1998) A comprehensive phylogenetic study of amiid fishes (Amiidae) based on comparative skeletal anatomy. An empirical search for interconnected patterns of natural history. Journal of Vertebrate Paleontology 18: 1-690.
-
(1998)
Journal of Vertebrate Paleontology
, vol.18
, pp. 1-690
-
-
Grande, L.1
Bemis, W.2
-
99
-
-
34447333562
-
A new palaeoniscid fish from the Texas Permian
-
Dunkle DH (1939) A new palaeoniscid fish from the Texas Permian. American Journal of Sciences 237: 262-274.
-
(1939)
American Journal of Sciences
, vol.237
, pp. 262-274
-
-
Dunkle, D.H.1
-
101
-
-
2442707716
-
Fugu genome analysis provides evidence for a shole-genome duplication early during the evolution of ray-finned fishes
-
Christoffels A, Koh EGL, Chia J, Brenner SE, Aparicio S, et al. (2004) Fugu genome analysis provides evidence for a shole-genome duplication early during the evolution of ray-finned fishes. Mol Biol Evol 21: 1146-1151.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1146-1151
-
-
Christoffels, A.1
Koh, E.G.L.2
Chia, J.3
Brenner, S.E.4
Aparicio, S.5
Et al.6
-
102
-
-
1242274629
-
Major events in the genome evolution of vertebrates: Paranome age and size differ considerably between ray-finned fishes and land vertebrates
-
Vandepoele K, De Vos W, Taylor JS, Meyer A, Van de Peer Y (2004) Major events in the genome evolution of vertebrates: Paranome age and size differ considerably between ray-finned fishes and land vertebrates. Proc Natl Acad Sci U S A 101: 1638-1643.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 1638-1643
-
-
Vandepoele, K.1
de Vos, W.2
Taylor, J.S.3
Meyer, A.4
Van de Peer, Y.5
-
103
-
-
0012707351
-
Fossil osteoglossomorphs in East Asia and their implications in teleostean phylogeny
-
In: Arratia G, Viohl G, editors, München: Verlag Dr. F. Pfeil
-
Shen M (1996) Fossil osteoglossomorphs in East Asia and their implications in teleostean phylogeny. In: Arratia G, Viohl G, editors. Mesozoic fishes: systematics and plaleoecology. München: Verlag Dr. F. Pfeil. pp. 261-272.
-
(1996)
Mesozoic Fishes: Systematics and Plaleoecology
, pp. 261-272
-
-
Shen, M.1
-
104
-
-
0032329524
-
Morphology and phylogenetic relationships of Kuntulunia (Teleostei: Osteoglossomorpha)
-
Zhang J-G (1998) Morphology and phylogenetic relationships of Kuntulunia (Teleostei: Osteoglossomorpha). Journal Vertebrate Paleontology 18: 280-300.
-
(1998)
Journal Vertebrate Paleontology
, vol.18
, pp. 280-300
-
-
Zhang, J.-G.1
-
105
-
-
0001259221
-
Early divergence of Hiodontiformes sensu stricto in East Asia and phylogeny of some Late Mesozoic teleosts from China
-
In: Arratia G, Schultze H-P, editors, München: Verlag Dr. F. Pfeil
-
Li G-Q, Wilson MVH (1999) Early divergence of Hiodontiformes sensu stricto in East Asia and phylogeny of some Late Mesozoic teleosts from China. In: Arratia G, Schultze H-P, editors. Mesozoic Fishes 2 - Systematics and Fossil Record. München: Verlag Dr. F. Pfeil. pp. 369-384.
-
(1999)
Mesozoic Fishes 2 - Systematics and Fossil Record
, pp. 369-384
-
-
Li, G.-Q.1
Wilson, M.V.H.2
-
106
-
-
0032583425
-
Comments on basal teleosts and teleostean phylogeny, by Gloria Arratia
-
Patterson C (1998) Comments on basal teleosts and teleostean phylogeny, by Gloria Arratia. Copeia 1998: 1107-1113.
-
(1998)
Copeia 1998
, pp. 1107-1113
-
-
Patterson, C.1
-
107
-
-
0002174047
-
Über den Bau and die Grenzer der Ganoiden and über das natürliche System dei Fische
-
Müller J (1845) Über den Bau and die Grenzer der Ganoiden and über das natürliche System dei Fische. Archiv für Naturgeschichte 11 (1844): 91-141.
-
(1845)
Archiv Für Naturgeschichte
, vol.11
, Issue.1844
, pp. 91-141
-
-
Müller, J.1
-
108
-
-
84876330382
-
Diversity of Mesozoic semionotiform fishes and the origin of gars (Lepisosteidae)
-
Cavin L (2010) Diversity of Mesozoic semionotiform fishes and the origin of gars (Lepisosteidae). Naturwissenschaften 57: 1017-1022.
-
(2010)
Naturwissenschaften
, vol.57
, pp. 1017-1022
-
-
Cavin, L.1
-
110
-
-
33845596459
-
Timing of recovery from the end-Permian extinction: Geochronologic and biostratigraphic constraints from south China
-
Lehrmann DJ, Ramezani J, Bowring SA, Martin MW, Montgomery P, et al. (2006) Timing of recovery from the end-Permian extinction: Geochronologic and biostratigraphic constraints from south China. Geology 34: 1053-1056.
-
(2006)
Geology
, vol.34
, pp. 1053-1056
-
-
Lehrmann, D.J.1
Ramezani, J.2
Bowring, S.A.3
Martin, M.W.4
Montgomery, P.5
|