메뉴 건너뛰기




Volumn 58, Issue 3, 2009, Pages 367-380

Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ARTICLE; BIRD; CALIBRATION; COMPARATIVE STUDY; FOSSIL; GENETICS; PHYLOGENY; STATISTICAL DISTRIBUTION; TIME; UNCERTAINTY;

EID: 70350103638     PISSN: 10635157     EISSN: 1076836X     Source Type: Journal    
DOI: 10.1093/sysbio/syp035     Document Type: Article
Times cited : (706)

References (89)
  • 1
    • 0036804729 scopus 로고    scopus 로고
    • Effects of models of rate evolution on estimation of divergence dates with special reference to the metazoan 18S ribosomal RNA phylogeny
    • Aris-Brosou S., Yang Z. 2002. Effects of models of rate evolution on estimation of divergence dates with special reference to the metazoan 18S ribosomal RNA phylogeny. Syst. Biol. 51:703-714.
    • (2002) Syst. Biol , vol.51 , pp. 703-714
    • Aris-Brosou, S.1    Yang, Z.2
  • 2
    • 0347356457 scopus 로고    scopus 로고
    • Bayesian models of episodic evolution support a Precambrian explosive diversification of the Metazoa
    • Aris-Brosou S., Yang Z. 2003. Bayesian models of episodic evolution support a Precambrian explosive diversification of the Metazoa. Mol. Biol. Evol. 20:1947-1954.
    • (2003) Mol. Biol. Evol , vol.20 , pp. 1947-1954
    • Aris-Brosou, S.1    Yang, Z.2
  • 3
    • 0037155601 scopus 로고    scopus 로고
    • Dynamics of Pleistocene population extinctions in Beringian brown bears
    • Barnes I., Matheus P., Shapiro B., Jensen D., Cooper A. 2002. Dynamics of Pleistocene population extinctions in Beringian brown bears. Science. 295:2267-2270.
    • (2002) Science , vol.295 , pp. 2267-2270
    • Barnes, I.1    Matheus, P.2    Shapiro, B.3    Jensen, D.4    Cooper, A.5
  • 5
    • 46649116745 scopus 로고    scopus 로고
    • Australia's oldest marsupial fossils and their biogeographical implications
    • Beck R.D.M., Godthelp H., Weisbecker V., Archer M., Hand S.J. 2008. Australia's oldest marsupial fossils and their biogeographical implications. PLoS One. 3:e1858.
    • (2008) PLoS One , vol.3
    • Beck, R.D.M.1    Godthelp, H.2    Weisbecker, V.3    Archer, M.4    Hand, S.J.5
  • 6
    • 33845883023 scopus 로고    scopus 로고
    • Paleontological evidence to date the tree of life
    • Benton M.J., Donoghue P.C. 2007. Paleontological evidence to date the tree of life. Mol. Biol. Evol. 24:26-53.
    • (2007) Mol. Biol. Evol , vol.24 , pp. 26-53
    • Benton, M.J.1    Donoghue, P.C.2
  • 7
    • 36849143183 scopus 로고
    • The world's oldest songbird
    • Boles W.E. 1995. The world's oldest songbird. Nature 374:21-22.
    • (1995) Nature , vol.374 , pp. 21-22
    • Boles, W.E.1
  • 9
    • 41049092682 scopus 로고    scopus 로고
    • Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages
    • Brown J.W., Rest J.S., Garcia-Moreno J., Sorenson M.D., Mindell D.P. 2008. Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages. BMC Biol. 6:6.
    • (2008) BMC Biol , vol.6 , pp. 6
    • Brown, J.W.1    Rest, J.S.2    Garcia-Moreno, J.3    Sorenson, M.D.4    Mindell, D.P.5
  • 10
    • 12744280741 scopus 로고    scopus 로고
    • Definitive fossil evidence for the extant avian radiation in the Cretaceous
    • Clarke J.A., Tambussi C.P., Noriega J.I., Erickson G.M., Ketcham R.A. 2005. Definitive fossil evidence for the extant avian radiation in the Cretaceous. Nature. 433:305-308.
    • (2005) Nature , vol.433 , pp. 305-308
    • Clarke, J.A.1    Tambussi, C.P.2    Noriega, J.I.3    Erickson, G.M.4    Ketcham, R.A.5
  • 11
    • 33846046530 scopus 로고    scopus 로고
    • 217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment
    • Coolen M.J., Overmann J. 2007. 217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment. Environ. Microbiol. 9:238-249.
    • (2007) Environ. Microbiol. , vol.9 , pp. 238-249
    • Coolen, M.J.1    Overmann, J.2
  • 12
    • 0030621127 scopus 로고    scopus 로고
    • Mass survival of birds across the Cretaceous-Tertiary boundary: Molecular evidence
    • Cooper A., Penny D. 1997. Mass survival of birds across the Cretaceous-Tertiary boundary: molecular evidence. Science. 275: 1109-1113.
    • (1997) Science , vol.275 , pp. 1109-1113
    • Cooper, A.1    Penny, D.2
  • 13
    • 0034100202 scopus 로고    scopus 로고
    • Understanding the overdispersed molecular clock
    • Cutler D.J. 2000. Understanding the overdispersed molecular clock. Genetics. 154:1403-1417.
    • (2000) Genetics , vol.154 , pp. 1403-1417
    • Cutler, D.J.1
  • 14
    • 34447333669 scopus 로고    scopus 로고
    • Rocks and clocks: Calibrating the Tree of Life using fossils and molecules
    • Donoghue P.C., Benton M.J. 2007. Rocks and clocks: calibrating the Tree of Life using fossils and molecules. Trends Ecol. Evol. 22: 424-431.
    • (2007) Trends Ecol. Evol , vol.22 , pp. 424-431
    • Donoghue, P.C.1    Benton, M.J.2
  • 15
    • 0030023247 scopus 로고    scopus 로고
    • Determining divergence times of the major kingdoms of living organisms with a protein clock
    • Doolittle R.F., Feng D.-F., Tsang S., Cho G., Little E. 1996. Determining divergence times of the major kingdoms of living organisms with a protein clock. Science. 271:470-477.
    • (1996) Science , vol.271 , pp. 470-477
    • Doolittle, R.F.1    Feng, D.-F.2    Tsang, S.3    Cho, G.4    Little, E.5
  • 17
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A.J., Rambaut A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7:214.
    • (2007) BMC Evol. Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 19
    • 34447249787 scopus 로고    scopus 로고
    • Alarm bells for the molecular clock? No support for Ho et al.'s model of time-dependent molecular rate estimates
    • Emerson B.C. 2007. Alarm bells for the molecular clock? No support for Ho et al.'s model of time-dependent molecular rate estimates. Syst. Biol. 56:337-345.
    • (2007) Syst. Biol , vol.56 , pp. 337-345
    • Emerson, B.C.1
  • 20
    • 41549084082 scopus 로고    scopus 로고
    • A Bayesian evaluation of human mito-chondrial substitution rates
    • Endicott P., Ho S.Y.W. 2008. A Bayesian evaluation of human mito-chondrial substitution rates. Am. J. Hum. Genet. 82:895-902.
    • (2008) Am. J. Hum. Genet , vol.82 , pp. 895-902
    • Endicott, P.1    Ho, S.Y.W.2
  • 21
    • 0028956985 scopus 로고
    • Explosive evolution in tertiary birds and mammals
    • Feduccia A. 1995. Explosive evolution in tertiary birds and mammals. Science. 267:637-638.
    • (1995) Science , vol.267 , pp. 637-638
    • Feduccia, A.1
  • 22
    • 0031403313 scopus 로고    scopus 로고
    • Estimating taxonomic durations and preservation probability
    • Foote M. 1997. Estimating taxonomic durations and preservation probability. Paleobiology. 23:278-300.
    • (1997) Paleobiology , vol.23 , pp. 278-300
    • Foote, M.1
  • 23
    • 0033605215 scopus 로고    scopus 로고
    • Evolutionary and preservational constraints on origins of biologic groups: Divergence times of eutherian mammals
    • Foote M., Hunter J.P., Janis C.M., Sepkoski J.J. Jr. 1999. Evolutionary and preservational constraints on origins of biologic groups: divergence times of eutherian mammals. Science. 283:1310-1314.
    • (1999) Science , vol.283 , pp. 1310-1314
    • Foote, M.1    Hunter, J.P.2    Janis, C.M.3    Sepkoski Jr., J.J.4
  • 24
    • 42449137071 scopus 로고    scopus 로고
    • Selection of fossils for calibration of moleclar dating models
    • Gandolfo M.A., Nixon K.C., Crepet W.L. 2008. Selection of fossils for calibration of moleclar dating models. Ann. Missouri Bot. Gard. 95:34-42.
    • (2008) Ann. Missouri Bot. Gard. , vol.95 , pp. 34-42
    • Gandolfo, M.A.1    Nixon, K.C.2    Crepet, W.L.3
  • 27
    • 1642554676 scopus 로고    scopus 로고
    • Reading the entrails of chickens: Molecular timescales of evolution and the illusion of precision
    • Graur D., Martin, W. 2004. Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision. Trends Genet. 20:80-86.
    • (2004) Trends Genet , vol.20 , pp. 80-86
    • Graur, D.1    Martin, W.2
  • 30
    • 2442667686 scopus 로고    scopus 로고
    • Four new avian mitochondrial genomes help get to basic evolutionary questions in the late cretaceous
    • Harrison G.L., McLenachan P.A., Phillips M.J., Slack K.E., Cooper A., Penny D. 2004. Four new avian mitochondrial genomes help get to basic evolutionary questions in the late cretaceous. Mol. Biol. Evol. 21:974-983.
    • (2004) Mol. Biol. Evol , vol.21 , pp. 974-983
    • Harrison, G.L.1    McLenachan, P.A.2    Phillips, M.J.3    Slack, K.E.4    Cooper, A.5    Penny, D.6
  • 31
    • 17444422891 scopus 로고    scopus 로고
    • Dating nodes on molecular phylogenies: A critique of molecular biogeography
    • Heads M. 2005. Dating nodes on molecular phylogenies: a critique of molecular biogeography. Cladistics. 21:62-78.
    • (2005) Cladistics , vol.21 , pp. 62-78
    • Heads, M.1
  • 32
    • 1942422549 scopus 로고    scopus 로고
    • Precision of molecular time estimates
    • Hedges S.B., Kumar S. 2004. Precision of molecular time estimates. Trends Genet. 202:242-247.
    • (2004) Trends Genet , vol.202 , pp. 242-247
    • Hedges, S.B.1    Kumar, S.2
  • 33
    • 0029669270 scopus 로고    scopus 로고
    • Continental breakup and the ordinal diversification of birds and mammals
    • Hedges S.B., Parker P.H., Sibley C.G., Kumar S. 1996. Continental breakup and the ordinal diversification of birds and mammals. Nature. 381:226-229.
    • (1996) Nature , vol.381 , pp. 226-229
    • Hedges, S.B.1    Parker, P.H.2    Sibley, C.G.3    Kumar, S.4
  • 34
    • 0034702196 scopus 로고    scopus 로고
    • The genetic legacy of the Quaternary ice ages
    • Hewitt G. 2000. The genetic legacy of the Quaternary ice ages. Nature. 405:907-913.
    • (2000) Nature , vol.405 , pp. 907-913
    • Hewitt, G.1
  • 35
    • 34347329101 scopus 로고    scopus 로고
    • Calibrating molecular estimates of substitution rates and divergence times in birds
    • Ho S.Y.W. 2007. Calibrating molecular estimates of substitution rates and divergence times in birds. J. Avian Biol. 38:409-414.
    • (2007) J. Avian Biol. , vol.38 , pp. 409-414
    • Ho, S.Y.W.1
  • 36
    • 67649133122 scopus 로고    scopus 로고
    • An examination of phylogenetic models of substitution rate variation among lineages
    • Ho S.Y.W. 2009. An examination of phylogenetic models of substitution rate variation among lineages. Biol. Lett. 5:421-424.
    • (2009) Biol. Lett , vol.5 , pp. 421-424
    • Ho, S.Y.W.1
  • 37
    • 38449100326 scopus 로고    scopus 로고
    • Elevated substitution rates estimated from ancient DNA
    • Ho S.Y.W., Kolokotronis S.-O., Allaby R.G. 2007. Elevated substitution rates estimated from ancient DNA. Biol. Lett. 3: 702-705.
    • (2007) Biol. Lett , vol.3 , pp. 702-705
    • Ho, S.Y.W.1    Kolokotronis, S.-O.2    Allaby, R.G.3
  • 38
    • 17744387938 scopus 로고    scopus 로고
    • Accuracy of rate estimation using relaxed-clock models with a critical focus on the early metazoan radiation
    • Ho S.Y.W., Phillips M.J., Drummond A.J., Cooper A. 2005. Accuracy of rate estimation using relaxed-clock models with a critical focus on the early metazoan radiation. Mol. Biol. Evol. 22: 1355-1363.
    • (2005) Mol. Biol. Evol , vol.22 , pp. 1355-1363
    • Ho, S.Y.W.1    Phillips, M.J.2    Drummond, A.J.3    Cooper, A.4
  • 39
    • 0037372985 scopus 로고    scopus 로고
    • The pedigree rate of sequence divergence in the human mitochondrial genome: There is a difference between phylo-genetic and pedigree rates
    • Howell N., Smejkal C.B., Mackey D.A., Chinnery P.F., Turnbull D.M., Herrnstadt C. 2003. The pedigree rate of sequence divergence in the human mitochondrial genome: there is a difference between phylo-genetic and pedigree rates. Am. J. Hum. Genet. 72:659-670.
    • (2003) Am. J. Hum. Genet. , vol.72 , pp. 659-670
    • Howell, N.1    Smejkal, C.B.2    MacKey, D.A.3    Chinnery, P.F.4    Turnbull, D.M.5    Herrnstadt, C.6
  • 40
    • 34547762740 scopus 로고    scopus 로고
    • The impact of fossils and taxon sampling on ancient molecular dating analyses
    • Hug L.A., Roger A.J. 2007. The impact of fossils and taxon sampling on ancient molecular dating analyses. Mol. Biol. Evol. 24:1889-1897.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1889-1897
    • Hug, L.A.1    Roger, A.J.2
  • 41
    • 34547465760 scopus 로고    scopus 로고
    • Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1
    • Hugall A.F., Foster R., Lee M.S. 2007. Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1. Syst. Biol. 56:543-563.
    • (2007) Syst. Biol. , vol.56 , pp. 543-563
    • Hugall, A.F.1    Foster, R.2    Lee, M.S.3
  • 42
    • 0035103260 scopus 로고    scopus 로고
    • Performance of a divergence time estimation method under a probabilistic model of rate evolution
    • Kishino H., Thorne J.L., Bruno W.J. 2001. Performance of a divergence time estimation method under a probabilistic model of rate evolution. Mol. Biol. Evol. 18:352-361.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 352-361
    • Kishino, H.1    Thorne, J.L.2    Bruno, W.J.3
  • 45
    • 0032855033 scopus 로고    scopus 로고
    • Molecular clock calibrations and metazoan divergence dates
    • Lee M.S.Y. 1999. Molecular clock calibrations and metazoan divergence dates. J. Mol. Evol. 49:385-391.
    • (1999) J. Mol. Evol. , vol.49 , pp. 385-391
    • Lee, M.S.Y.1
  • 46
    • 60349127526 scopus 로고    scopus 로고
    • Phylogenetic uncertainty and molecular clock calibrations: A case study of legless lizards (Pygopodidae, Gekkota)
    • Lee M.S.Y., Oliver M., Hutchinson N. 2009. Phylogenetic uncertainty and molecular clock calibrations: a case study of legless lizards (Pygopodidae, Gekkota). Mol. Phylogenet. Evol. 50:661-666.
    • (2009) Mol. Phylogenet. Evol. , vol.50 , pp. 661-666
    • Lee, M.S.Y.1    Oliver, M.2    Hutchinson, N.3
  • 47
    • 0032844525 scopus 로고    scopus 로고
    • The molecular clock of HIV-1 unveiled through analysis of a known transmission history
    • Leitner T., Albert J. 1999. The molecular clock of HIV-1 unveiled through analysis of a known transmission history. Proc. Natl. Acad. Sci. USA. 96:10752-10757.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 10752-10757
    • Leitner, T.1    Albert, J.2
  • 48
  • 49
    • 32044457409 scopus 로고    scopus 로고
    • Continuous and tractable models for the variation of evolutionary rates
    • Lepage T., Tupper P., Bryant D., Lawi S. 2006. Continuous and tractable models for the variation of evolutionary rates. Math. Biosci. 199:216-233.
    • (2006) Math. Biosci. , vol.199 , pp. 216-233
    • Lepage, T.1    Tupper, P.2    Bryant, D.3    Lawi, S.4
  • 50
    • 18144364012 scopus 로고    scopus 로고
    • Taxon sampling effects in molecular clock dating: An example from the African Restionaceae
    • Linder H.P., Hardy C.R., Rutschmann F. 2005. Taxon sampling effects in molecular clock dating: an example from the African Restionaceae. Mol. Phylogenet. Evol. 35:569-582
    • (2005) Mol. Phylogenet. Evol. , vol.35 , pp. 569-582
    • Linder, H.P.1    Hardy, C.R.2    Rutschmann, F.3
  • 51
    • 4944255292 scopus 로고    scopus 로고
    • Dating lineages: Molecular and paleontological approaches to the temporal framework of clades
    • Magallón S. 2004. Dating lineages: molecular and paleontological approaches to the temporal framework of clades. Int. J. Plant Sci. 165:S7-S21.
    • (2004) Int. J. Plant Sci. , vol.165
    • Magallón, S.1
  • 52
    • 0030859884 scopus 로고    scopus 로고
    • Confidence intervals on stratigraphic ranges with non-random distributions of fossil horizons
    • Marshall C.R. 1997. Confidence intervals on stratigraphic ranges with non-random distributions of fossil horizons. Paleobiology. 23: 165-173.
    • (1997) Paleobiology , vol.23 , pp. 165-173
    • Marshall, C.R.1
  • 53
    • 43949092742 scopus 로고    scopus 로고
    • A simple method for bracketing absolute divergence times on molecular phylogenies using multiple fossil calibration points
    • Marshall C.R. 2008. A simple method for bracketing absolute divergence times on molecular phylogenies using multiple fossil calibration points. Am. Nat. 171:726-742.
    • (2008) Am. Nat. , vol.171 , pp. 726-742
    • Marshall, C.R.1
  • 54
    • 42049110943 scopus 로고    scopus 로고
    • How to summarize estimates of ancestral divergence times
    • Morrison D.A. 2008. How to summarize estimates of ancestral divergence times. Evol. Bioinf. 4:75-95.
    • (2008) Evol. Bioinf. , vol.4 , pp. 75-95
    • Morrison, D.A.1
  • 55
    • 27744565287 scopus 로고    scopus 로고
    • Four well-constrained calibration points from the vertebrate fossil record for molecular clock estimates
    • Muller J., Reisz R.R. 2005. Four well-constrained calibration points from the vertebrate fossil record for molecular clock estimates. Bioessays. 27:1069-1075.
    • (2005) Bioessays , vol.27 , pp. 1069-1075
    • Muller, J.1    Reisz, R.R.2
  • 56
    • 13944259078 scopus 로고    scopus 로고
    • Assessing concordance of fossil calibration points in molecular clock studies: An example using turtles
    • Near T.J., Meylan P.A., Shaffer H.B. 2005. Assessing concordance of fossil calibration points in molecular clock studies: an example using turtles. Am. Nat. 165:137-146.
    • (2005) Am. Nat. , vol.165 , pp. 137-146
    • Near, T.J.1    Meylan, P.A.2    Shaffer, H.B.3
  • 57
    • 38349152557 scopus 로고    scopus 로고
    • Caveats on the use of fossil calibrations for molecular dating: A comment on Near et al
    • Parham J.F., Irmis R.B. 2008. Caveats on the use of fossil calibrations for molecular dating: a comment on Near et al. Am. Nat. 171: 132-136.
    • (2008) Am. Nat. , vol.171 , pp. 132-136
    • Parham, J.F.1    Irmis, R.B.2
  • 58
    • 4544292696 scopus 로고    scopus 로고
    • The rise of birds and mammals: Are microevolutionary processes sufficient for macroevolution?
    • Penny D., Phillips M.J. 2004. The rise of birds and mammals: are microevolutionary processes sufficient for macroevolution? Trends Ecol. Evol. 19:516-522.
    • (2004) Trends Ecol Evol , vol.19 , pp. 516-522
    • Penny, D.1    Phillips, M.J.2
  • 59
    • 0034939837 scopus 로고    scopus 로고
    • Can long-distance dispersal be inferred from the New Zealand plant fossil record?
    • Pole M.S. 2001. Can long-distance dispersal be inferred from the New Zealand plant fossil record? Aust. J. Bot. 49:357-366.
    • (2001) Aust. J. Bot. , vol.49 , pp. 357-366
    • Pole, M.S.1
  • 60
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada D., Crandall K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics. 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 61
    • 38149012877 scopus 로고    scopus 로고
    • Phylogeography and postglacial expansion of Mus musculus domesticus inferred from mitochondrial DNA coalescent, from Iran to Europe
    • Rajabi-Maham H., Orth A., Bonhomme F. 2008. Phylogeography and postglacial expansion of Mus musculus domesticus inferred from mitochondrial DNA coalescent, from Iran to Europe. Mol. Ecol. 17:627-641.
    • (2008) Mol. Ecol , vol.17 , pp. 627-641
    • Rajabi-Maham, H.1    Orth, A.2    Bonhomme, F.3
  • 62
    • 0034044313 scopus 로고    scopus 로고
    • Estimating the rate of molecular evolution: Incorporating non-contemporaneous sequences into maximum likelihood phylogenies
    • Rambaut A. 2000. Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies. Bioinformatics. 16:395-399.
    • (2000) Bioinformatics , vol.16 , pp. 395-399
    • Rambaut, A.1
  • 63
    • 0031966291 scopus 로고    scopus 로고
    • Estimating divergence dates from molecular sequences
    • Rambaut A., Bromham L. 1998. Estimating divergence dates from molecular sequences. Mol. Biol. Evol. 15:442-448.
    • (1998) Mol. Biol. Evol , vol.15 , pp. 442-448
    • Rambaut, A.1    Bromham, L.2
  • 64
    • 34548556039 scopus 로고    scopus 로고
    • Inferring speciation times under an episodic molecular clock
    • Rannala B., Yang Z. 2007. Inferring speciation times under an episodic molecular clock. Syst. Biol. 56:453-466.
    • (2007) Syst. Biol. , vol.56 , pp. 453-466
    • Rannala, B.1    Yang, Z.2
  • 66
    • 27644548127 scopus 로고    scopus 로고
    • Relaxed molecular clocks for dating historical plant dispersal events
    • Renner S.S. 2005. Relaxed molecular clocks for dating historical plant dispersal events. Trends Plant Sci. 10:1360-1385.
    • (2005) Trends Plant Sci , vol.10 , pp. 1360-1385
    • Renner, S.S.1
  • 67
    • 33645030825 scopus 로고    scopus 로고
    • Molecular dating of phylogenetic trees: A brief review of current methods that estimate divergence times
    • Rutschmann F. 2006. Molecular dating of phylogenetic trees: a brief review of current methods that estimate divergence times. Diversity Distrib. 12:35-48.
    • (2006) Diversity Distrib , vol.12 , pp. 35-48
    • Rutschmann, F.1
  • 69
    • 34547481471 scopus 로고    scopus 로고
    • Evaluating molecular clock calibrations using Bayesian analyses with soft and hard bounds
    • Sanders K.L., Lee M.S. 2007. Evaluating molecular clock calibrations using Bayesian analyses with soft and hard bounds. Biol. Lett. 3:275-279.
    • (2007) Biol. Lett. , vol.3 , pp. 275-279
    • Sanders, K.L.1    Lee, M.S.2
  • 70
    • 0030773749 scopus 로고    scopus 로고
    • A nonparametric approach to estimating divergence times in the absence of rate constancy
    • Sanderson M.J. 1997. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 14:1218-1231.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 1218-1231
    • Sanderson, M.J.1
  • 71
    • 0036135468 scopus 로고    scopus 로고
    • Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach
    • Sanderson M.J. 2002. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Mol. Biol. Evol. 19:101-109.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 101-109
    • Sanderson, M.J.1
  • 72
    • 0037314098 scopus 로고    scopus 로고
    • R8s: Inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock
    • Sanderson M.J. 2003. r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock. Bioinformatics. 19:301-302.
    • (2003) Bioinformatics , vol.19 , pp. 301-302
    • Sanderson, M.J.1
  • 74
    • 0001556362 scopus 로고
    • Classical confidence intervals and Bayesian probability estimates for ends of local taxon ranges
    • Strauss D., Sadler P.M. 1989. Classical confidence intervals and Bayesian probability estimates for ends of local taxon ranges. Math. Geology. 21:411-427.
    • (1989) Math. Geology. , vol.21 , pp. 411-427
    • Strauss, D.1    Sadler, P.M.2
  • 75
    • 58149250135 scopus 로고    scopus 로고
    • Consistent estimation of divergence times in phylogenetic trees with local molecular clocks
    • Svennblad B. 2008. Consistent estimation of divergence times in phylogenetic trees with local molecular clocks. Syst. Biol. 57: 947-954.
    • (2008) Syst. Biol. , vol.57 , pp. 947-954
    • Svennblad, B.1
  • 76
    • 0029100727 scopus 로고
    • Phylogenetic test of the molecular clock and linearized trees
    • Takezaki N., Rzhetsky A., Nei M. 1995. Phylogenetic test of the molecular clock and linearized trees. Mol. Biol. Evol. 12:823-833
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 823-833
    • Takezaki, N.1    Rzhetsky, A.2    Nei, M.3
  • 77
    • 0037129204 scopus 로고    scopus 로고
    • Using the fossil record to estimate the age of the last common ancestor of extant primates
    • Ta v a r é S., Marshall C.R., Will O., Soligo C., Martin R.D. 2002. Using the fossil record to estimate the age of the last common ancestor of extant primates. Nature. 416:726-729.
    • (2002) Nature , vol.416 , pp. 726-729
    • Tavaré, S.1
  • 78
    • 0036803223 scopus 로고    scopus 로고
    • Divergence time and evolutionary rate estimation with multilocus data
    • Thorne J.L., Kishino H. 2002. Divergence time and evolutionary rate estimation with multilocus data. Syst. Biol. 51:689-702.
    • (2002) Syst. Biol. , vol.51 , pp. 689-702
    • Thorne, J.L.1    Kishino, H.2
  • 79
    • 0031741182 scopus 로고    scopus 로고
    • Estimating the rate of evolution of the rate of molecular evolution
    • Thorne J.L., Kishino H., Painter I.S. 1998. Estimating the rate of evolution of the rate of molecular evolution. Mol. Biol. Evol. 15: 1647-1657.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1647-1657
    • Thorne, J.L.1    Kishino, H.2    Painter, I.S.3
  • 80
    • 36549023365 scopus 로고    scopus 로고
    • Back to the future: Museum specimens in population genetics
    • Wandeler P., Hoeck P.E.A., Keller L.F. 2007. Back to the future: museum specimens in population genetics. Trends Ecol. Evol. 22: 634-642.
    • (2007) Trends Ecol. Evol. , vol.22 , pp. 634-642
    • Wandeler, P.1    Hoeck, P.E.A.2    Keller, L.F.3
  • 82
    • 20144362109 scopus 로고    scopus 로고
    • Molecular dating when rates vary
    • Welch J.J., Bromham L. 2005. Molecular dating when rates vary. Trends Ecol. Evol. 20:320-327.
    • (2005) Trends Ecol. Evol , vol.20 , pp. 320-327
    • Welch, J.J.1    Bromham, L.2
  • 85
    • 0001572733 scopus 로고    scopus 로고
    • Dispersal, vicariance, and the Late Cretaceous to early Tertiary land mammal biogeography from South America to Australia
    • Woodburne M.O., Case J.A. 1996. Dispersal, vicariance, and the Late Cretaceous to early Tertiary land mammal biogeography from South America to Australia. J. Mammal. Evol. 3:121-161.
    • (1996) J. Mammal. Evol. , vol.3 , pp. 121-161
    • Woodburne, M.O.1    Case, J.A.2
  • 86
    • 28944451210 scopus 로고    scopus 로고
    • Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
    • Yang Z., Rannala B. 2006. Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Mol. Biol. Evol. 23:212-226.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 212-226
    • Yang, Z.1    Rannala, B.2
  • 87
    • 0033933640 scopus 로고    scopus 로고
    • Estimation of primate speciation dates using local molecular clocks
    • Yoder A.D., Yang Z.H. 2000. Estimation of primate speciation dates using local molecular clocks. Mol. Biol. Evol. 17:1081-1090.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1081-1090
    • Yoder, A.D.1    Yang, Z.H.2
  • 88
    • 0002331493 scopus 로고
    • Molecular disease, evolution and genic heterogeneity
    • Kasha M., Pullman B., editors New York: Academic Press
    • Zuckerkandl E., Pauling L. 1962. Molecular disease, evolution and genic heterogeneity. In: Kasha M., Pullman B., editors. Horizons in biochemistry. New York: Academic Press. p. 189-225
    • (1962) Horizons in Biochemistry , pp. 189-225
    • Zuckerkandl, E.1    Pauling, L.2
  • 89
    • 0001895697 scopus 로고
    • Evolutionary divergence and convergence in proteins
    • Bryson V., Vogel H.J., editors New York: Academic Press
    • Zuckerkandl E., Pauling L. 1965. Evolutionary divergence and convergence in proteins. In: Bryson V., Vogel H.J., editors. Evolving genes and proteins. New York: Academic Press. p. 97-166.
    • (1965) Evolving Genes and Proteins , pp. 97-166
    • Zuckerkandl, E.1    Pauling, L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.