A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences

Molecular Phylogenetics and Evolution

Volumn 20, Issue 2, 2001, Pages 275-285

  Inoue, Jun G ^a   Miya, Masaki ^b   Tsukamoto, Katsumi ^a   Nishida, Mutsumi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b NATURAL HISTORY MUSEUM AND INSTITUTE   (Japan)

Author keywords

Complete mtDNA sequence; Higher level relationships; Long PCR; Mitogenomics; Taxonomic sampling; Teleostei

Indexed keywords

DNA SEQUENCE; GENETIC LINE; GENETIC RELATIONSHIP; MITOCHONDRIAL DNA; MITOGENIC AGENT; NUCLEOTIDE SEQUENCE; PARSIMONY ANALYSIS; PHYLOGENY; TRANSFER RNA;

CLUPEOMORPHA; ELOPOMORPHA; OSTARIOPHYSI; OSTEOGLOSSOMORPHA; OSTEOGLOSSUM BICIRRHOSUM; PANTODON BUCHHOLZI; PROTACANTHOPTERYGII; TELEOSTEI;

EID: 0034904214     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.2001.0970     Document Type: Article

References (51)

1. Sequence and organization of the human mitochondrial genome
2. The caudal skeleton of Jurassic teleosts: A phylogenetic analysis
3. Basal teleosts and teleostean phylogeny
4. Basal teleosts and teleostean phylogeny: Response to C. Patterson
5. The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome
6. Complete mitochondrial genome amplification
7. The complete nucleotide sequence of the mitochondrial DNA of the dogfish, Scyliorhinus canicula
8. Teleostean monophyly
9. Interrelationships of osteoglossomorphs
10. Phyletic studies of teleostean fishes, with a provisional classification of living forms
11. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
12. Taxonomic sampling, phylogenetic accuracy, and investigator bias
13. The complete mitochondrial DNA sequence of the Atlantic salmon, Salmo salar
14. Complete mitochondrial DNA sequence of the Japanese eel Anguilla japonicus
15. Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus
16. Complete mitochondrial DNA sequence of Conger myriaster (Teleostei: Anguilliformes): Novel gene order for vertebrate mitochondrial genomes and the phylogenetic implications for anguilliform families
17. Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus
18. The complete mitochondrial DNA sequence of Atlantic cod (Gadus morhua): Relevance to taxonomic studies among codfishes
19. Relationships of lower euteleostean fishes
20. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
21. Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
22. Molecular phylogeny of osteoglossoids: A new model for Gondwanian origin and plate tectonic transportation of the Asian arowana
23. Mitochondrial molecular clocks and the origin of euteleostean biodiversity: Familial radiation of perciforms may have predated the Cretaceous/Trertiary boundary
24. The evolution and interrelationships of the actinopterygian fishes
25. A 28S rRNA-based phylogeny of the gnathostomes: First steps in the analysis of conflict and congruence with morphologically based cladograms
26. Clupeomorpha, sister-group of Ostariophysi
27. Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomi-iformes): First example of transfer RNA gene rearrangements in bony fishes
28. Use of mitogenomic information in teleostean molecular phylogenetics: A tree-based exploration under the maximum-parsimony optimality criterion
29. Le complexe urophore des poissons téléostéens
30. Phylogeny of major fish groups
31. The complete mitochondrial DNA sequence of the bichir (Polypterus ornatipinnis), a basal ray-finned fish: Ancient establishment of the consensus vertebrate gene order
32. Comments on basal teleosts and teleostean phylogeny, by Gloria Arratia
33. Review of ichthyodectiform and other Mesozoic teleost fishes and the theory and practice of classifying fossils
34. Molecules and morphology in studies of fish evolution
35. Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
36. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of human and apes
37. The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
38. The complete nucleotide sequence of the Crossostoma lacustre mitochondrial genome: Conservation and variations among vertebrates
39. The complete nucleotide sequence of the mitochondrial DNA genome of the rainbow trout, Oncorhynchus mykiss
40. Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates