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Volumn 110, Issue 1, 2013, Pages 123-128

Antibacterial drug leads targeting isoprenoid biosynthesis

Author keywords

Drug discovery; in silico high throughput screening; Peptidoglycan; Protein structure

Indexed keywords

AMIDINE; AMINE; ANTIINFECTIVE AGENT; BACTERIAL ENZYME; BENZOIC ACID DERIVATIVE; ENZYME INHIBITOR; ISOPRENOID; METICILLIN; OXOACID; PHOSPHONIC ACID DERIVATIVE; SYNTHETASE; UNCLASSIFIED DRUG; UNDECAPRENYL DIPHOSPHATE SYNTHASE; UNDECAPRENYL DIPHOSPHATE SYNTHASE INHIBITOR;

EID: 84871983896     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1219899110     Document Type: Article
Times cited : (89)

References (33)
  • 1
    • 77956975241 scopus 로고    scopus 로고
    • Targeting isoprenoid biosynthesis for drug discovery: Bench to bedside
    • Oldfield E (2010) Targeting isoprenoid biosynthesis for drug discovery: Bench to bedside. Acc Chem Res 43(9):1216-1226.
    • (2010) Acc Chem Res , vol.43 , Issue.9 , pp. 1216-1226
    • Oldfield, E.1
  • 2
    • 84856158159 scopus 로고    scopus 로고
    • Terpene biosynthesis: Modularity rules
    • Oldfield E, Lin FY (2012) Terpene biosynthesis: Modularity rules. Angew Chem Int Ed Engl 51(5):1124-1137.
    • (2012) Angew Chem Int Ed Engl , vol.51 , Issue.5 , pp. 1124-1137
    • Oldfield, E.1    Lin, F.Y.2
  • 4
    • 20144382151 scopus 로고    scopus 로고
    • Crystal structures of undecaprenyl pyrophosphate synthase in complex with magnesium, isopentenyl pyrophosphate, and farnesyl thiopyrophosphate: Roles of the metal ion and conserved residues in catalysis
    • Guo RT, et al. (2005) Crystal structures of undecaprenyl pyrophosphate synthase in complex with magnesium, isopentenyl pyrophosphate, and farnesyl thiopyrophosphate: Roles of the metal ion and conserved residues in catalysis. J Biol Chem 280(21):20762-20774.
    • (2005) J Biol Chem , vol.280 , Issue.21 , pp. 20762-20774
    • Guo, R.T.1
  • 5
    • 34547231214 scopus 로고    scopus 로고
    • Bisphosphonates target multiple sites in both cis- And transprenyltransferases
    • Guo RT, et al. (2007) Bisphosphonates target multiple sites in both cis- and transprenyltransferases. Proc Natl Acad Sci USA 104(24):10022-10027.
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.24 , pp. 10022-10027
    • Guo, R.T.1
  • 7
    • 41549083437 scopus 로고    scopus 로고
    • Kinetic studies of Micrococcus luteus B-P 26 undecaprenyl diphosphate synthase reaction using 3-desmethyl allylic substrate analogs
    • DOI 10.1271/bbb.70723
    • Fujikura K, Maki Y, Ohya N, Satoh M, Koyama T (2008) Kinetic studies of Micrococcus luteus B-P 26 undecaprenyl diphosphate synthase reaction using 3-desmethyl allylic substrate analogs. Biosci Biotechnol Biochem 72(3):851-855. (Pubitemid 351463674)
    • (2008) Bioscience, Biotechnology and Biochemistry , vol.72 , Issue.3 , pp. 851-855
    • Fujikura, K.1    Maki, Y.2    Ohya, N.3    Satoh, M.4    Koyama, T.5
  • 8
    • 42949132874 scopus 로고    scopus 로고
    • Structure-based inhibitors exhibit differential activities against Helicobacter pylori and Escherichia coli undecaprenyl pyrophosphate synthases
    • Kuo CJ, et al. (2008) Structure-based inhibitors exhibit differential activities against Helicobacter pylori and Escherichia coli undecaprenyl pyrophosphate synthases. J Biomed Biotechnol 2008:841312.
    • (2008) J Biomed Biotechnol , vol.2008 , pp. 841312
    • Kuo, C.J.1
  • 9
    • 80051587151 scopus 로고    scopus 로고
    • Non-bisphosphonate inhibitors of isoprenoid biosynthesis identified via computer-aided drug design
    • Durrant JD, et al. (2011) Non-bisphosphonate inhibitors of isoprenoid biosynthesis identified via computer-aided drug design. Chem Biol Drug Des 78(3):323-332.
    • (2011) Chem Biol Drug des , vol.78 , Issue.3 , pp. 323-332
    • Durrant, J.D.1
  • 10
    • 84861074825 scopus 로고    scopus 로고
    • HIV-1 integrase inhibitor-inspired antibacterials targeting isoprenoid biosynthesis
    • Zhang Y, et al. (2012) HIV-1 integrase inhibitor-inspired antibacterials targeting isoprenoid biosynthesis. ACS Med Chem Lett 3(5):402-406.
    • (2012) ACS Med Chem Lett , vol.3 , Issue.5 , pp. 402-406
    • Zhang, Y.1
  • 11
    • 37349041697 scopus 로고    scopus 로고
    • Lipid intermediates in the biosynthesis of bacterial peptidoglycan
    • van Heijenoort J (2007) Lipid intermediates in the biosynthesis of bacterial peptidoglycan. Microbiol Mol Biol Rev 71(4):620-635.
    • (2007) Microbiol Mol Biol Rev , vol.71 , Issue.4 , pp. 620-635
    • Van Heijenoort, J.1
  • 12
    • 84867356071 scopus 로고    scopus 로고
    • Inhibitors targeting on cell wall biosynthesis pathway of MRSA
    • Hao H, Cheng G, Dai M, Wu Q, Yuan Z (2012) Inhibitors targeting on cell wall biosynthesis pathway of MRSA. Mol Biosyst 8(11):2828-2838.
    • (2012) Mol Biosyst , vol.8 , Issue.11 , pp. 2828-2838
    • Hao, H.1    Cheng, G.2    Dai, M.3    Wu, Q.4    Yuan, Z.5
  • 13
    • 0345313624 scopus 로고    scopus 로고
    • Use of genomics to identify bacterial undecaprenyl pyrophosphate synthetase: Cloning, expression, and characterization of the essential uppS gene
    • Apfel CM, Takács B, Fountoulakis M, Stieger M, Keck W (1999) Use of genomics to identify bacterial undecaprenyl pyrophosphate synthetase: Cloning, expression, and characterization of the essential uppS gene. J Bacteriol 181(2):483-492. (Pubitemid 29045139)
    • (1999) Journal of Bacteriology , vol.181 , Issue.2 , pp. 483-492
    • Apfel, C.M.1    Takacs, B.2    Fountoulakis, M.3    Stieger, M.4    Keck, W.5
  • 14
    • 58149492519 scopus 로고    scopus 로고
    • Different reaction mechanisms for cis- And transprenyltransferases
    • Lu YP, Liu HG, Liang PH (2009) Different reaction mechanisms for cis- and transprenyltransferases. Biochem Biophys Res Commun 379(2):351-355.
    • (2009) Biochem Biophys Res Commun , vol.379 , Issue.2 , pp. 351-355
    • Lu, Y.P.1    Liu, H.G.2    Liang, P.H.3
  • 15
    • 77957260432 scopus 로고    scopus 로고
    • Mechanism of cis-prenyltransferase reaction probed by substrate analogues
    • Lu YP, Liu HG, Teng KH, Liang PH (2010) Mechanism of cis- prenyltransferase reaction probed by substrate analogues. Biochem Biophys Res Commun 400(4):758-762.
    • (2010) Biochem Biophys Res Commun , vol.400 , Issue.4 , pp. 758-762
    • Lu, Y.P.1    Liu, H.G.2    Teng, K.H.3    Liang, P.H.4
  • 16
    • 0036681416 scopus 로고    scopus 로고
    • Scoring residue conservation
    • Valdar WSJ (2002) Scoring residue conservation. Proteins 48(2):227-241.
    • (2002) Proteins , vol.48 , Issue.2 , pp. 227-241
    • Valdar, W.S.J.1
  • 17
    • 84871943957 scopus 로고    scopus 로고
    • Crystal structure of Staphylococcus undecaprenyl pyrophosphate synthase and uses thereof
    • US Patent Application No. 10/688,167
    • Ammirati M, Pandit J (2002) Crystal structure of Staphylococcus undecaprenyl pyrophosphate synthase and uses thereof. US Patent Application No. 10/688,167.
    • (2002)
    • Ammirati, M.1    Pandit, J.2
  • 19
    • 52949091593 scopus 로고    scopus 로고
    • Resistance mapping and mode of action of a novel class of antibacterial anthranilic acids: Evidence for disruption of cell wall biosynthesis
    • Mott JE, et al. (2008) Resistance mapping and mode of action of a novel class of antibacterial anthranilic acids: Evidence for disruption of cell wall biosynthesis. J Antimicrob Chemother 62(4):720-729.
    • (2008) J Antimicrob Chemother , vol.62 , Issue.4 , pp. 720-729
    • Mott, J.E.1
  • 20
    • 70349328445 scopus 로고    scopus 로고
    • Novel broad-spectrum bis-(imidazolinylindole) derivatives with potent antibacterial activities against antibiotic-resistant strains
    • Panchal RG, et al. (2009) Novel broad-spectrum bis-(imidazolinylindole) derivatives with potent antibacterial activities against antibiotic-resistant strains. Antimicrob Agents Chemother 53(10):4283-4291.
    • (2009) Antimicrob Agents Chemother , vol.53 , Issue.10 , pp. 4283-4291
    • Panchal, R.G.1
  • 21
    • 77956120372 scopus 로고    scopus 로고
    • Comparative in vitro activity profiles of novel bis-indole antibacterials against gram-positive and gram-negative clinical isolates
    • Butler MM, et al. (2010) Comparative in vitro activity profiles of novel bis-indole antibacterials against gram-positive and gram-negative clinical isolates. Antimicrob Agents Chemother 54(9):3974-3977.
    • (2010) Antimicrob Agents Chemother , vol.54 , Issue.9 , pp. 3974-3977
    • Butler, M.M.1
  • 22
    • 75449102744 scopus 로고    scopus 로고
    • De novo design of antimicrobial polymers, foldamers, and small molecules: From discovery to practical applications
    • Tew GN, Scott RW, Klein ML, Degrado WF (2010) De novo design of antimicrobial polymers, foldamers, and small molecules: From discovery to practical applications. Acc Chem Res 43(1):30-39.
    • (2010) Acc Chem Res , vol.43 , Issue.1 , pp. 30-39
    • Tew, G.N.1    Scott, R.W.2    Klein, M.L.3    Degrado, W.F.4
  • 23
    • 45949096180 scopus 로고    scopus 로고
    • Influence of lipid composition on membrane activity of antimicrobial phenylene ethynylene oligomers
    • Som A, Tew GN (2008) Influence of lipid composition on membrane activity of antimicrobial phenylene ethynylene oligomers. J Phys Chem B 112(11):3495-3502.
    • (2008) J Phys Chem B , vol.112 , Issue.11 , pp. 3495-3502
    • Som, A.1    Tew, G.N.2
  • 24
    • 77954266293 scopus 로고    scopus 로고
    • Orientation, dynamics, and lipid interaction of an antimicrobial arylamide investigated by 19F and 31P solid-state NMR spectroscopy
    • Su Y, DeGrado WF, Hong M (2010) Orientation, dynamics, and lipid interaction of an antimicrobial arylamide investigated by 19F and 31P solid-state NMR spectroscopy. J Am Chem Soc 132(26):9197-9205.
    • (2010) J Am Chem Soc , vol.132 , Issue.26 , pp. 9197-9205
    • Su, Y.1    DeGrado, W.F.2    Hong, M.3
  • 25
    • 58549115686 scopus 로고    scopus 로고
    • Mechanism of a prototypical synthetic membrane-active antimicrobial: Efficient hole-punching via interaction with negative intrinsic curvature lipids
    • Yang L, et al. (2008) Mechanism of a prototypical synthetic membrane-active antimicrobial: Efficient hole-punching via interaction with negative intrinsic curvature lipids. Proc Natl Acad Sci USA 105(52):20595-20600.
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.52 , pp. 20595-20600
    • Yang, L.1
  • 26
    • 0024847290 scopus 로고
    • What is synergy?
    • Berenbaum MC (1989) What is synergy? Pharmacol Rev 41(2):93-141.
    • (1989) Pharmacol Rev , vol.41 , Issue.2 , pp. 93-141
    • Berenbaum, M.C.1
  • 27
    • 0002515716 scopus 로고    scopus 로고
    • Antimicrobial combinations
    • ed Lorian V (Williams & Wilkins, Baltimore), 4th Ed
    • Eliopoulos GM, Moellering RC (1998) Antimicrobial combinations. Antibiotics in Laboratory Medicine, ed Lorian V (Williams & Wilkins, Baltimore), 4th Ed, pp 330-396.
    • (1998) Antibiotics in Laboratory Medicine , pp. 330-396
    • Eliopoulos, G.M.1    Moellering, R.C.2
  • 28
    • 0033725250 scopus 로고    scopus 로고
    • Synergistic and additive killing by antimicrobial factors found in human airway surface liquid
    • Singh PK, Tack BF, McCray PB, Jr., Welsh MJ (2000) Synergistic and additive killing by antimicrobial factors found in human airway surface liquid. Am J Physiol Lung Cell Mol Physiol 279(5):L799-L805.
    • (2000) Am J Physiol Lung Cell Mol Physiol , vol.279 , Issue.5
    • Singh, P.K.1    Tack, B.F.2    McCray Jr., P.B.3    Welsh, M.J.4
  • 29
    • 0034281188 scopus 로고    scopus 로고
    • EUCAST Definitive Document E.Def 1.2, May 2000: Terminology relating to methods for the determination of susceptibility of bacteria to antimicrobial agents
    • European Committee for Antimicrobial Susceptibility Testing (EUCAST) of the European Society of Clinical Microbiology and Infectious Dieases (ESCMID)
    • European Committee for Antimicrobial Susceptibility Testing (EUCAST) of the European Society of Clinical Microbiology and Infectious Dieases (ESCMID) (2000) EUCAST Definitive Document E.Def 1.2, May 2000: Terminology relating to methods for the determination of susceptibility of bacteria to antimicrobial agents. Clin Microbiol Infect 6(9):503-508.
    • (2000) Clin Microbiol Infect , vol.6 , Issue.9 , pp. 503-508
  • 30
    • 84864464925 scopus 로고    scopus 로고
    • FTMap: Extended protein mapping with user-selected probe molecules
    • Ngan CH, et al. (2012) FTMap: Extended protein mapping with user-selected probe molecules. Nucleic Acids Res 40(Web Server issue):W271-W275.
    • (2012) Nucleic Acids Res , vol.40 , Issue.WEB SERVER ISSUE
    • Ngan, C.H.1
  • 31
    • 33750398103 scopus 로고    scopus 로고
    • Bio3d: An R package for the comparative analysis of protein structures
    • DOI 10.1093/bioinformatics/btl461
    • Grant BJ, Rodrigues APC, ElSawy KM, McCammon JA, Caves LSD (2006) Bio3d: An R package for the comparative analysis of protein structures. Bioinformatics 22(21):2695-2696. (Pubitemid 44642612)
    • (2006) Bioinformatics , vol.22 , Issue.21 , pp. 2695-2696
    • Grant, B.J.1    Rodrigues, A.P.C.2    ElSawy, K.M.3    McCammon, J.A.4    Caves, L.S.D.5
  • 33
    • 84862024512 scopus 로고    scopus 로고
    • Structures, mechanisms and inhibitors of undecaprenyl diphosphate synthase: A cis-prenyltransferase for bacterial peptidoglycan biosynthesis
    • Teng KH, Liang PH (2012) Structures, mechanisms and inhibitors of undecaprenyl diphosphate synthase: A cis-prenyltransferase for bacterial peptidoglycan biosynthesis. Bioorg Chem 43:51-57.
    • (2012) Bioorg Chem , vol.43 , pp. 51-57
    • Teng, K.H.1    Liang, P.H.2


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