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Volumn 22, Issue 21, 2006, Pages 2695-2696

Bio3d: An R package for the comparative analysis of protein structures

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; AUTOMATION; CONTROLLED STUDY; CRYSTALLOGRAPHY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FAMILY; PROTEIN STRUCTURE; SEQUENCE HOMOLOGY;

EID: 33750398103     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl461     Document Type: Article
Times cited : (1357)

References (10)
  • 1
    • 0032101346 scopus 로고    scopus 로고
    • Essential spaces defined by NMR structure ensembles and molecular dynamics simulation show significant overlap
    • Abseher,R. et al. (1998) Essential spaces defined by NMR structure ensembles and molecular dynamics simulation show significant overlap. Proteins, 31, 370-382.
    • (1998) Proteins , vol.31 , pp. 370-382
    • Abseher, R.1
  • 2
    • 0031910020 scopus 로고    scopus 로고
    • Locally accessible conformations of proteins: Multiple molecular dynamics simulations of crambin
    • Caves,L.S.D. et al. (1998) Locally accessible conformations of proteins: multiple molecular dynamics simulations of crambin. Protein Sci., 7, 649-666.
    • (1998) Protein Sci. , vol.7 , pp. 649-666
    • Caves, L.S.D.1
  • 3
    • 26944458918 scopus 로고    scopus 로고
    • The physical determinants of the DNA conformational landscape
    • Elsawy,K.M. et al. (2005) The physical determinants of the DNA conformational landscape. Nucleic Acids Res., 33, 5749-5762.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 5749-5762
    • Elsawy, K.M.1
  • 4
    • 0000231955 scopus 로고
    • Conjugate peak refinement: An algorithm for finding reaction paths and accurate transition states in systems with many degrees of freedom
    • Fischer,S. and Karplus,M. (1992) Conjugate peak refinement: An algorithm for finding reaction paths and accurate transition states in systems with many degrees of freedom. Chem. Phys. Lett., 194, 252-261.
    • (1992) Chem. Phys. Lett. , vol.194 , pp. 252-261
    • Fischer, S.1    Karplus, M.2
  • 5
    • 0029091249 scopus 로고
    • Average core structures and variability measures for protein families: Application to the immunoglobulins
    • Gerstein,M. and Altman,R.B. (1995) Average core structures and variability measures for protein families: Application to the immunoglobulins. J. Mol. Biol., 251, 161-175.
    • (1995) J. Mol. Biol. , vol.251 , pp. 161-175
    • Gerstein, M.1    Altman, R.B.2
  • 6
    • 33750419723 scopus 로고    scopus 로고
    • Kinesin sequence, structure and dynamics
    • PhD Thesis. University of York, York, UK
    • Grant,B.J. (2004) Kinesin sequence, structure and dynamics. PhD Thesis. University of York, York, UK.
    • (2004)
    • Grant, B.J.1
  • 7
    • 0032006209 scopus 로고    scopus 로고
    • Systematic analysis of domain motions in proteins from conformational change: New results on citrate synthase and T4 lysozyme
    • Hayward,S. and Berendsen,H. (1998) Systematic analysis of domain motions in proteins from conformational change: New results on citrate synthase and T4 lysozyme. Proteins, 30, 144-154.
    • (1998) Proteins , vol.30 , pp. 144-154
    • Hayward, S.1    Berendsen, H.2
  • 8
    • 0029878720 scopus 로고    scopus 로고
    • VMD: Visual molecular dynamics
    • Humphrey,W. et al. (1996) VMD: Visual molecular dynamics. J. Mol. Graph., 14, 33-38.
    • (1996) J. Mol. Graph. , vol.14 , pp. 33-38
    • Humphrey, W.1
  • 9
    • 33748324384 scopus 로고    scopus 로고
    • R: A language and environment for statistical computing
    • R Development Core Team Vienna, Austria
    • Development Core Team (2006) R: A language and environment for statistical computing. Vienna, Austria.
    • (2006)
  • 10
    • 0030833135 scopus 로고    scopus 로고
    • Protein dynamics derived from clusters of crystal structures
    • van Aalten,D.M.F. et al. (1997) Protein dynamics derived from clusters of crystal structures. Biophys. J., 73, 2891-2896.
    • (1997) Biophys. J. , vol.73 , pp. 2891-2896
    • van Aalten, D.M.F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.