-
1
-
-
0042375854
-
Structure-function relationship of serine protease-protein inhibitor interaction
-
Otlewski J, Jaskolski M, Buczek O, Cierpicki T, CzapiÅska H, Krowarsch D, Smalas AO, Stachowiak D, Szpineta A, &, Dadlez M, (2001) Structure-function relationship of serine protease-protein inhibitor interaction. Acta Biochim Pol 48, 419-428.
-
(2001)
Acta Biochim Pol
, vol.48
, pp. 419-428
-
-
Otlewski, J.1
Jaskolski, M.2
Buczek, O.3
Cierpicki, T.4
Czapiåska, H.5
Krowarsch, D.6
Smalas, A.O.7
Stachowiak, D.8
Szpineta, A.9
Dadlez, M.10
-
2
-
-
0030028728
-
Principles of protein-protein interactions
-
Jones S, &, Thornton JM, (1996) Principles of protein-protein interactions. Proc Natl Acad Sci USA 93, 13-20.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 13-20
-
-
Jones, S.1
Thornton, J.M.2
-
3
-
-
11244313537
-
Leucaena leucocephala serine proteinase inhibitor: Primary structure and action on blood coagulation, kinin release and rat paw edema
-
Oliva MLV, Souza-Pinto JC, Batista IFC, Araujo MS, Silveira VF, Auerswald EA, Mentele R, Eckerskorn C, Sampaio MU, &, Sampaio CAM, (2000) Leucaena leucocephala serine proteinase inhibitor: primary structure and action on blood coagulation, kinin release and rat paw edema. Biochim Biophys Acta 1477, 64-74.
-
(2000)
Biochim Biophys Acta
, vol.1477
, pp. 64-74
-
-
Oliva, M.L.V.1
Souza-Pinto, J.C.2
Batista, I.F.C.3
Araujo, M.S.4
Silveira, V.F.5
Auerswald, E.A.6
Mentele, R.7
Eckerskorn, C.8
Sampaio, M.U.9
Sampaio, C.A.M.10
-
4
-
-
78149358882
-
A novel subclassification for Kunitz proteinase inhibitors from leguminous seeds
-
Oliva MLV, Silva MCC, Sallai RC, Brito MV, &, Sampaio MU, (2010) A novel subclassification for Kunitz proteinase inhibitors from leguminous seeds. Biochimie 92, 1667-1673.
-
(2010)
Biochimie
, vol.92
, pp. 1667-1673
-
-
Oliva, M.L.V.1
Silva, M.C.C.2
Sallai, R.C.3
Brito, M.V.4
Sampaio, M.U.5
-
5
-
-
85004399341
-
Distribution of the Kunitz and the Bowman-Birk family proteinase inhibitors in leguminous seeds (biological chemistry)
-
Norioka N, Hara S, Ikenaka T, &, Abe J, (1988) Distribution of the Kunitz and the Bowman-Birk family proteinase inhibitors in leguminous seeds (biological chemistry). Agric Biol Chem 52, 1245-1252.
-
(1988)
Agric Biol Chem
, vol.52
, pp. 1245-1252
-
-
Norioka, N.1
Hara, S.2
Ikenaka, T.3
Abe, J.4
-
6
-
-
0344926284
-
Crystal structure of the Kunitz (STI)-type inhibitor from Delonix regia seeds
-
Krauchenco S, Pando SC, Marangoni S, &, Polikarpov I, (2003) Crystal structure of the Kunitz (STI)-type inhibitor from Delonix regia seeds. Biochem Biophys Res Commun 312, 1303-1308.
-
(2003)
Biochem Biophys Res Commun
, vol.312
, pp. 1303-1308
-
-
Krauchenco, S.1
Pando, S.C.2
Marangoni, S.3
Polikarpov, I.4
-
7
-
-
41949092326
-
A Kunitz trypsin inhibitor of Entada scandens seeds: Another member with single disulfide bridge
-
Lingaraju MH, &, Gowda LR, (2008) A Kunitz trypsin inhibitor of Entada scandens seeds: another member with single disulfide bridge. Biochim Biophys Acta 1784, 850-855.
-
(2008)
Biochim Biophys Acta
, vol.1784
, pp. 850-855
-
-
Lingaraju, M.H.1
Gowda, L.R.2
-
8
-
-
0028174287
-
Erythrina caffra trypsin inhibitor retains its native structure and function after reducing its disulfide bonds
-
Lehle K, Wrba A, &, Jaenicke R, (1994) Erythrina caffra trypsin inhibitor retains its native structure and function after reducing its disulfide bonds. J Mol Biol 239, 276-284.
-
(1994)
J Mol Biol
, vol.239
, pp. 276-284
-
-
Lehle, K.1
Wrba, A.2
Jaenicke, R.3
-
9
-
-
0015576315
-
Studies on soybean trypsin inhibitors
-
Koide T, &, Ikenaka T, (1973) Studies on soybean trypsin inhibitors. Eur J Biochem 32, 417-431.
-
(1973)
Eur J Biochem
, vol.32
, pp. 417-431
-
-
Koide, T.1
Ikenaka, T.2
-
10
-
-
78149357485
-
Peptidase inhibitors in the MEROPS database
-
Rawlings ND, (2010) Peptidase inhibitors in the MEROPS database. Biochimie 92, 1463-1483.
-
(2010)
Biochimie
, vol.92
, pp. 1463-1483
-
-
Rawlings, N.D.1
-
11
-
-
0032536108
-
Kunitz-type soybean trypsin inhibitor revisited: Refined structure of its complex with porcine trypsin reveals an insight into the interaction between a homologous inhibitor from Erythrina caffra and tissue-type plasminogen activator
-
Song HK, &, Suh SW, (1998) Kunitz-type soybean trypsin inhibitor revisited: refined structure of its complex with porcine trypsin reveals an insight into the interaction between a homologous inhibitor from Erythrina caffra and tissue-type plasminogen activator. J Mol Biol 275, 347-363.
-
(1998)
J Mol Biol
, vol.275
, pp. 347-363
-
-
Song, H.K.1
Suh, S.W.2
-
12
-
-
0025977085
-
Crystal structure of a Kunitz-type trypsin inhibitor from Erythrina caffra seeds
-
Onesti S, Brick P, &, Blow DM, (1991) Crystal structure of a Kunitz-type trypsin inhibitor from Erythrina caffra seeds. J Mol Biol 217, 153-176.
-
(1991)
J Mol Biol
, vol.217
, pp. 153-176
-
-
Onesti, S.1
Brick, P.2
Blow, D.M.3
-
13
-
-
0033562425
-
Refined crystal structure (2.3 A) of a double-headed winged bean alpha-chymotrypsin inhibitor and location of its second reactive site
-
Dattagupta JK, Podder A, Chakrabarti C, Sen U, Mukhopadhyay D, Dutta SK, &, Singh M, (1999) Refined crystal structure (2.3 A) of a double-headed winged bean alpha-chymotrypsin inhibitor and location of its second reactive site. Proteins 35, 321-331.
-
(1999)
Proteins
, vol.35
, pp. 321-331
-
-
Dattagupta, J.K.1
Podder, A.2
Chakrabarti, C.3
Sen, U.4
Mukhopadhyay, D.5
Dutta, S.K.6
Singh, M.7
-
14
-
-
0033229921
-
Cryocrystallography of a Kunitz-type serine protease inhibitor: The 90 K structure of winged bean chymotrypsin inhibitor (WCI) at 2.13 A resolution
-
Ravichandran S, Sen U, Chakrabarti C, &, Dattagupta JK, (1999) Cryocrystallography of a Kunitz-type serine protease inhibitor: the 90 K structure of winged bean chymotrypsin inhibitor (WCI) at 2.13 A resolution. Acta Crystallogr D Biol Crystallogr 55, 1814-1821.
-
(1999)
Acta Crystallogr D Biol Crystallogr
, vol.55
, pp. 1814-1821
-
-
Ravichandran, S.1
Sen, U.2
Chakrabarti, C.3
Dattagupta, J.K.4
-
15
-
-
0032128101
-
Structure of the Kunitz-type soybean trypsin inhibitor (STI): Implication for the interactions between members of the STI family and tissue-plasminogen activator
-
Meester PD, Brick P, Lloyd LF, Blow DM, &, Onesti S, (1998) Structure of the Kunitz-type soybean trypsin inhibitor (STI): implication for the interactions between members of the STI family and tissue-plasminogen activator. Acta Crystallogr D Biol Crystallogr 54, 589-597.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 589-597
-
-
Meester, P.D.1
Brick, P.2
Lloyd, L.F.3
Blow, D.M.4
Onesti, S.5
-
16
-
-
33744958385
-
Spacer Asn determines the fate of Kunitz (STI) inhibitors, as revealed by structural and biochemical studies on WCI mutants
-
Dasgupta J, Khamrui S, Dattagupta JK, &, Sen U, (2006) Spacer Asn determines the fate of Kunitz (STI) inhibitors, as revealed by structural and biochemical studies on WCI mutants. Biochemistry 45, 6783-6792.
-
(2006)
Biochemistry
, vol.45
, pp. 6783-6792
-
-
Dasgupta, J.1
Khamrui, S.2
Dattagupta, J.K.3
Sen, U.4
-
17
-
-
2342625270
-
Three-dimensional structure of an unusual Kunitz (STI) type trypsin inhibitor from Copaifera langsdorffii
-
Krauchenco S, Nagem RAP, Da Silva JA, Marangoni S, &, Polikarpov I, (2004) Three-dimensional structure of an unusual Kunitz (STI) type trypsin inhibitor from Copaifera langsdorffii. Biochimie 86, 167-172.
-
(2004)
Biochimie
, vol.86
, pp. 167-172
-
-
Krauchenco, S.1
Nagem, R.A.P.2
Da Silva, J.A.3
Marangoni, S.4
Polikarpov, I.5
-
18
-
-
34447553302
-
Crystal structure of a novel cysteinless plant Kunitz-type protease inhibitor
-
Hansen D, Macedo-Ribeiro S, Verassimo P, Yoo Im S, Sampaio MU, &, Oliva MLV, (2007) Crystal structure of a novel cysteinless plant Kunitz-type protease inhibitor. Biochem Biophys Res Commun 360, 735-740.
-
(2007)
Biochem Biophys Res Commun
, vol.360
, pp. 735-740
-
-
Hansen, D.1
MacEdo-Ribeiro, S.2
Verassimo, P.3
Yoo Im, S.4
Sampaio, M.U.5
Oliva, M.L.V.6
-
19
-
-
74149093016
-
Cloning, sequence analysis and crystal structure determination of a miraculin-like protein from Murraya koenigii
-
Gahloth D, Selvakumar P, Shee C, Kumar P, &, Sharma AK, (2010) Cloning, sequence analysis and crystal structure determination of a miraculin-like protein from Murraya koenigii. Arch Biochem Biophys 494, 15-22.
-
(2010)
Arch Biochem Biophys
, vol.494
, pp. 15-22
-
-
Gahloth, D.1
Selvakumar, P.2
Shee, C.3
Kumar, P.4
Sharma, A.K.5
-
20
-
-
70350355110
-
The ternary structure of the double-headed arrowhead protease inhibitor API-A complexed with two trypsins reveals a novel reactive site conformation
-
Bao R, Zhou CZ, Jiang C, Lin SX, Chi CW, &, Chen Y, (2009) The ternary structure of the double-headed arrowhead protease inhibitor API-A complexed with two trypsins reveals a novel reactive site conformation. J Biol Chem 284, 26676-26684.
-
(2009)
J Biol Chem
, vol.284
, pp. 26676-26684
-
-
Bao, R.1
Zhou, C.Z.2
Jiang, C.3
Lin, S.X.4
Chi, C.W.5
Chen, Y.6
-
21
-
-
77955771956
-
New properties of the soybean trypsin inhibitor: Inhibition of human neutrophil elastase and its effect on acute pulmonary injury
-
Ribeiro JKC, Cunha DDS, Fook JM, &, Sales MP, (2010) New properties of the soybean trypsin inhibitor: inhibition of human neutrophil elastase and its effect on acute pulmonary injury. Eur J Pharmacol 644, 238-244.
-
(2010)
Eur J Pharmacol
, vol.644
, pp. 238-244
-
-
Ribeiro, J.K.C.1
Cunha, D.D.S.2
Fook, J.M.3
Sales, M.P.4
-
22
-
-
24744445796
-
Suppression of urokinase expression and invasion by a soybean Kunitz trypsin inhibitor are mediated through inhibition of Src-dependent signaling pathways
-
Inagaki K, Kobayashi H, Yoshida R, Kanada Y, Fukuda Y, Yagyu T, Kondo T, Kurita N, Kitanaka T, &, Yamada Y, (2005) Suppression of urokinase expression and invasion by a soybean Kunitz trypsin inhibitor are mediated through inhibition of Src-dependent signaling pathways. J Biol Chem 280, 31428-31437.
-
(2005)
J Biol Chem
, vol.280
, pp. 31428-31437
-
-
Inagaki, K.1
Kobayashi, H.2
Yoshida, R.3
Kanada, Y.4
Fukuda, Y.5
Yagyu, T.6
Kondo, T.7
Kurita, N.8
Kitanaka, T.9
Yamada, Y.10
-
23
-
-
84855271492
-
EcTI, a plant proteinase inhibitor, decreases in vitro cell adhesion and invasion by inhibition of Src-FAK signaling pathways
-
De Paula CAA, Coulson-Thomas VJ, Ferreira JG, Maza PK, Suzuki E, Nakahata AM, Nader HB, Sampaio MU, &, Oliva MLV, (2012) EcTI, a plant proteinase inhibitor, decreases in vitro cell adhesion and invasion by inhibition of Src-FAK signaling pathways. J Biol Chem 287, 170-182.
-
(2012)
J Biol Chem
, vol.287
, pp. 170-182
-
-
De Paula, C.A.A.1
Coulson-Thomas, V.J.2
Ferreira, J.G.3
Maza, P.K.4
Suzuki, E.5
Nakahata, A.M.6
Nader, H.B.7
Sampaio, M.U.8
Oliva, M.L.V.9
-
24
-
-
79955452292
-
The effects of a plant proteinase inhibitor from Enterolobium contortisiliquum on human tumor cell lines
-
Nakahata AM, Mayer B, Ries C, de Paula CAA, Karow M, Neth P, Sampaio MU, Jochum M, &, Oliva MLV, (2011) The effects of a plant proteinase inhibitor from Enterolobium contortisiliquum on human tumor cell lines. Biol Chem 392, 327-336.
-
(2011)
Biol Chem
, vol.392
, pp. 327-336
-
-
Nakahata, A.M.1
Mayer, B.2
Ries, C.3
De Paula, C.A.A.4
Karow, M.5
Neth, P.6
Sampaio, M.U.7
Jochum, M.8
Oliva, M.L.V.9
-
25
-
-
0030111221
-
Primary structure of a Kunitz-type trypsin inhibitor from Enterolobium contortisiliquum seeds
-
Batista IFC, Oliva MLV, Araujo MS, Sampaio MU, Richardson M, Fritz H, &, Sampaio CAM, (1996) Primary structure of a Kunitz-type trypsin inhibitor from Enterolobium contortisiliquum seeds. Phytochemistry 41, 1017-1022.
-
(1996)
Phytochemistry
, vol.41
, pp. 1017-1022
-
-
Batista, I.F.C.1
Oliva, M.L.V.2
Araujo, M.S.3
Sampaio, M.U.4
Richardson, M.5
Fritz, H.6
Sampaio, C.A.M.7
-
26
-
-
0037699905
-
Kinetic characterization of factor Xa binding using a quenched fluorescent substrate based on the reactive site of factor Xa inhibitor from Bauhinia ungulata seeds
-
Oliva MLV, Andrade SA, Juliano MA, Sallai RC, Torquato RJ, Sampaio MU, Pott VJ, &, Sampaio CAM, (2003) Kinetic characterization of factor Xa binding using a quenched fluorescent substrate based on the reactive site of factor Xa inhibitor from Bauhinia ungulata seeds. Curr Med Chem 10, 1085-1093.
-
(2003)
Curr Med Chem
, vol.10
, pp. 1085-1093
-
-
Oliva, M.L.V.1
Andrade, S.A.2
Juliano, M.A.3
Sallai, R.C.4
Torquato, R.J.5
Sampaio, M.U.6
Pott, V.J.7
Sampaio, C.A.M.8
-
27
-
-
0034935397
-
Bauhinia bauhinioides plasma kallikrein inhibitor interaction with synthetic peptides and fluorogenic peptide substrates related to the reactive site sequence
-
Oliva MLV, Mendes CR, Santomauro-Vaz EM, Juliano MA, Mentele R, Auerswald EA, Sampaio MU, &, Sampaio CAM, (2001) Bauhinia bauhinioides plasma kallikrein inhibitor interaction with synthetic peptides and fluorogenic peptide substrates related to the reactive site sequence. Curr Med Chem 8, 977-984.
-
(2001)
Curr Med Chem
, vol.8
, pp. 977-984
-
-
Oliva, M.L.V.1
Mendes, C.R.2
Santomauro-Vaz, E.M.3
Juliano, M.A.4
Mentele, R.5
Auerswald, E.A.6
Sampaio, M.U.7
Sampaio, C.A.M.8
-
28
-
-
79960339137
-
Structural and functional properties of Kunitz proteinase inhibitors from leguminosae: A mini review
-
Luiza Vilela Oliva M, da Silva Ferreira R, Gasperazzo Ferreira J, Alessandra Andrade de Paula C, Salas CE, &, Uemura Sampaio M, (2011) Structural and functional properties of Kunitz proteinase inhibitors from leguminosae: a mini review. Curr Protein Pept Sci 12, 348-357.
-
(2011)
Curr Protein Pept Sci
, vol.12
, pp. 348-357
-
-
Luiza Vilela Oliva, M.1
Da Silva Ferreira, R.2
Gasperazzo Ferreira, J.3
Alessandra Andrade De Paula, C.4
Salas, C.E.5
Uemura Sampaio, M.6
-
29
-
-
0034936371
-
Structure of cruzipain/cruzain inhibitors isolated from Bauhinia bauhinioides seeds
-
Oliveira C, Santana LA, Carmona AK, Cezari MH, Sampaio MU, Sampaio CAM, &, Oliva MLV, (2001) Structure of cruzipain/cruzain inhibitors isolated from Bauhinia bauhinioides seeds. Biol Chem 382, 847-852.
-
(2001)
Biol Chem
, vol.382
, pp. 847-852
-
-
Oliveira, C.1
Santana, L.A.2
Carmona, A.K.3
Cezari, M.H.4
Sampaio, M.U.5
Sampaio, C.A.M.6
Oliva, M.L.V.7
-
30
-
-
77953288202
-
Bauhinia variegata var. variegata trypsin inhibitor: From isolation to potential medicinal applications
-
Fang EF, Wong JH, Bah CSF, Lin P, Tsao SW, &, Ng TB, (2010) Bauhinia variegata var. variegata trypsin inhibitor: from isolation to potential medicinal applications. Biochem Biophys Res Commun 396, 806-811.
-
(2010)
Biochem Biophys Res Commun
, vol.396
, pp. 806-811
-
-
Fang, E.F.1
Wong, J.H.2
Bah, C.S.F.3
Lin, P.4
Tsao, S.W.5
Ng, T.B.6
-
31
-
-
68149108489
-
Purification, crystallization and preliminary crystallographic studies of a Kunitz-type proteinase inhibitor from tamarind (Tamarindus indica) seeds
-
Patil DN, Chaudhry A, Sharma AK, Tomar S, &, Kumar P, (2009) Purification, crystallization and preliminary crystallographic studies of a Kunitz-type proteinase inhibitor from tamarind (Tamarindus indica) seeds. Acta Crystallogr Sect F Struct Biol Cryst Commun 65, 736-738.
-
(2009)
Acta Crystallogr Sect F Struct Biol Cryst Commun
, vol.65
, pp. 736-738
-
-
Patil, D.N.1
Chaudhry, A.2
Sharma, A.K.3
Tomar, S.4
Kumar, P.5
-
32
-
-
73449139066
-
Crystallization and preliminary X-ray diffraction analysis of the complex of Kunitz-type tamarind trypsin inhibitor and porcine pancreatic trypsin
-
Tomar S, Patil DN, Datta M, Tapas S, Chaudhary A, Sharma AK, &, Kumar P, (2009) Crystallization and preliminary X-ray diffraction analysis of the complex of Kunitz-type tamarind trypsin inhibitor and porcine pancreatic trypsin. Acta Crystallogr Sect F Struct Biol Cryst Commun 65, 1179-1181.
-
(2009)
Acta Crystallogr Sect F Struct Biol Cryst Commun
, vol.65
, pp. 1179-1181
-
-
Tomar, S.1
Patil, D.N.2
Datta, M.3
Tapas, S.4
Chaudhary, A.5
Sharma, A.K.6
Kumar, P.7
-
33
-
-
20744458540
-
In vivo bioinsecticidal activity toward Ceratitis capitata (fruit fly) and Callosobruchus maculatus (cowpea weevil) and in vitro bioinsecticidal activity toward different orders of insect pests of a trypsin inhibitor purified from tamarind tree (Tamarindus indica) seeds
-
Araújo CL, Bezerra IWL, Oliveira AS, Moura FT, Macedo LLP, Gomes CEM, Barbosa AEAD, Macedo FP, Souza TMS, &, Franco OL, (2005) In vivo bioinsecticidal activity toward Ceratitis capitata (fruit fly) and Callosobruchus maculatus (cowpea weevil) and in vitro bioinsecticidal activity toward different orders of insect pests of a trypsin inhibitor purified from tamarind tree (Tamarindus indica) seeds. J Agric Food Chem 53, 4381-4387.
-
(2005)
J Agric Food Chem
, vol.53
, pp. 4381-4387
-
-
Araújo, C.L.1
Bezerra, I.W.L.2
Oliveira, A.S.3
Moura, F.T.4
MacEdo, L.L.P.5
Gomes, C.E.M.6
Barbosa, A.7
MacEdo, F.P.8
Souza, T.M.S.9
Franco, O.L.10
-
34
-
-
28244462005
-
Cloning, expression and characterization of Bauhinia variegata trypsin inhibitor BvTI
-
De Souza AF, Torquato RJS, Tanaka AS, &, Sampaio CAM, (2005) Cloning, expression and characterization of Bauhinia variegata trypsin inhibitor BvTI. Biol Chem 386, 1185-1189.
-
(2005)
Biol Chem
, vol.386
, pp. 1185-1189
-
-
De Souza, A.F.1
Torquato, R.J.S.2
Tanaka, A.S.3
Sampaio, C.A.M.4
-
35
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
Chen VB, Arendall WB, Headd JJ, Keedy DA, Immormino RM, Kapral GJ, Murray LW, Richardson JS, &, Richardson DC, (2010) MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr D Biol Crystallogr 66, 12-21.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
36
-
-
0026556882
-
Beta-Trefoil fold. Patterns of structure and sequence in the Kunitz inhibitors interleukins-1 beta and 1 alpha and fibroblast growth factors
-
Murzin AG, Lesk AM, &, Chothia C, (1992) beta-Trefoil fold. Patterns of structure and sequence in the Kunitz inhibitors interleukins-1 beta and 1 alpha and fibroblast growth factors. J Mol Biol 223, 531-543.
-
(1992)
J Mol Biol
, vol.223
, pp. 531-543
-
-
Murzin, A.G.1
Lesk, A.M.2
Chothia, C.3
-
37
-
-
0018785852
-
Three-fold structural pattern in the soybean trypsin inhibitor (Kunitz)
-
McLachlan AD, (1979) Three-fold structural pattern in the soybean trypsin inhibitor (Kunitz). J Mol Biol 133, 557-563.
-
(1979)
J Mol Biol
, vol.133
, pp. 557-563
-
-
McLachlan, A.D.1
-
39
-
-
0033544354
-
Cation-π interactions in proteins: Can simple models provide an accurate description?
-
Minoux H, &, Chipot C, (1999) Cation-π interactions in proteins: can simple models provide an accurate description? J Am Chem Soc 121, 10366-10372.
-
(1999)
J Am Chem Soc
, vol.121
, pp. 10366-10372
-
-
Minoux, H.1
Chipot, C.2
-
40
-
-
0028984438
-
Proposed cation-pi mediated binding by factor Xa: A novel enzymatic mechanism for molecular recognition
-
Lin Z, &, Johnson ME, (1995) Proposed cation-pi mediated binding by factor Xa: a novel enzymatic mechanism for molecular recognition. FEBS Lett 370, 1-5.
-
(1995)
FEBS Lett
, vol.370
, pp. 1-5
-
-
Lin, Z.1
Johnson, M.E.2
-
41
-
-
0038723723
-
The extended interactions and Gla domain of blood coagulation factor Xa
-
Wang SX, Hur E, Sousa CA, Brinen L, Slivka EJ, &, Fletterick RJ, (2003) The extended interactions and Gla domain of blood coagulation factor Xa. Biochemistry 42, 7959-7966.
-
(2003)
Biochemistry
, vol.42
, pp. 7959-7966
-
-
Wang, S.X.1
Hur, E.2
Sousa, C.A.3
Brinen, L.4
Slivka, E.J.5
Fletterick, R.J.6
-
42
-
-
0029057296
-
Contribution of residue 192 in factor Xa to enzyme specificity and function
-
Rezaie AR, &, Esmon CT, (1995) Contribution of residue 192 in factor Xa to enzyme specificity and function. J Biol Chem 270, 16176-16181.
-
(1995)
J Biol Chem
, vol.270
, pp. 16176-16181
-
-
Rezaie, A.R.1
Esmon, C.T.2
-
43
-
-
33646581724
-
Antithrombin-S195A factor Xa-heparin structure reveals the allosteric mechanism of antithrombin activation
-
Johnson DJD, Li W, Adams TE, &, Huntington JA, (2006) Antithrombin-S195A factor Xa-heparin structure reveals the allosteric mechanism of antithrombin activation. EMBO J 25, 2029-2037.
-
(2006)
EMBO J
, vol.25
, pp. 2029-2037
-
-
Johnson, D.J.D.1
Li, W.2
Adams, T.E.3
Huntington, J.A.4
-
44
-
-
70449572365
-
Crystal structure of protein Z-dependent inhibitor complex shows how protein Z functions as a cofactor in the membrane inhibition of factor X
-
Wei Z, Yan Y, Carrell RW, &, Zhou A, (2009) Crystal structure of protein Z-dependent inhibitor complex shows how protein Z functions as a cofactor in the membrane inhibition of factor X. Blood 114, 3662-3667.
-
(2009)
Blood
, vol.114
, pp. 3662-3667
-
-
Wei, Z.1
Yan, Y.2
Carrell, R.W.3
Zhou, A.4
-
45
-
-
0031566430
-
The second Kunitz domain of human tissue factor pathway inhibitor: Cloning, structure determination and interaction with factor Xa
-
Burgering MJM, Orbons LPM, van der Doelen A, Mulders J, Theunissen HJM, Grootenhuis PDJ, Bode W, Huber R, &, Stubbs MT, (1997) The second Kunitz domain of human tissue factor pathway inhibitor: cloning, structure determination and interaction with factor Xa. J Mol Biol 269, 395-407.
-
(1997)
J Mol Biol
, vol.269
, pp. 395-407
-
-
Burgering, M.J.M.1
Orbons, L.P.M.2
Van Der Doelen, A.3
Mulders, J.4
Theunissen, H.J.M.5
Grootenhuis, P.D.J.6
Bode, W.7
Huber, R.8
Stubbs, M.T.9
-
46
-
-
0030852320
-
X-ray structure of antistasin at 1.9 A resolution and its modelled complex with blood coagulation factor Xa
-
Lapatto R, Krengel U, Schreuder HA, Arkema A, de Boer B, Kalk KH, Hol WGJ, Grootenhuis PDJ, Mulders JWM, &, Dijkema R, (1997) X-ray structure of antistasin at 1.9 A resolution and its modelled complex with blood coagulation factor Xa. EMBO J 16, 5151-5161.
-
(1997)
EMBO J
, vol.16
, pp. 5151-5161
-
-
Lapatto, R.1
Krengel, U.2
Schreuder, H.A.3
Arkema, A.4
De Boer, B.5
Kalk, K.H.6
Hol, W.G.J.7
Grootenhuis, P.D.J.8
Mulders, J.W.M.9
Dijkema, R.10
-
47
-
-
0032538320
-
Unexpected binding mode of tick anticoagulant peptide complexed to bovine factor Xa
-
Wei A, Alexander RS, Duke J, Ross H, Rosenfeld SA, &, Chang CH, (1998) Unexpected binding mode of tick anticoagulant peptide complexed to bovine factor Xa. J Mol Biol 283, 147-154.
-
(1998)
J Mol Biol
, vol.283
, pp. 147-154
-
-
Wei, A.1
Alexander, R.S.2
Duke, J.3
Ross, H.4
Rosenfeld, S.A.5
Chang, C.H.6
-
48
-
-
0029820080
-
Role of residue 99 at the S2 subsite of factor Xa and activated protein C in enzyme specificity
-
Rezaie AR, (1996) Role of residue 99 at the S2 subsite of factor Xa and activated protein C in enzyme specificity. J Biol Chem 271, 23807-23814.
-
(1996)
J Biol Chem
, vol.271
, pp. 23807-23814
-
-
Rezaie, A.R.1
-
49
-
-
0035004409
-
Perspectives on factor Xa inhibition
-
Rai R, Sprengeler PA, Elrod KC, &, Young WB, (2001) Perspectives on factor Xa inhibition. Curr Med Chem 8, 101-119.
-
(2001)
Curr Med Chem
, vol.8
, pp. 101-119
-
-
Rai, R.1
Sprengeler, P.A.2
Elrod, K.C.3
Young, W.B.4
-
50
-
-
0035382791
-
The use of 3D structural data in the design of specific factor Xa inhibitors
-
Maignan S, &, Mikol V, (2001) The use of 3D structural data in the design of specific factor Xa inhibitors. Curr Top Med Chem 1, 161-174.
-
(2001)
Curr Top Med Chem
, vol.1
, pp. 161-174
-
-
Maignan, S.1
Mikol, V.2
-
52
-
-
76649092620
-
A rapid TRIzol-based two-step method for DNA-free RNA extraction from Arabidopsis siliques and dry seeds
-
Meng L, &, Feldman L, (2010) A rapid TRIzol-based two-step method for DNA-free RNA extraction from Arabidopsis siliques and dry seeds. Biotechnol J 5, 183-186.
-
(2010)
Biotechnol J
, vol.5
, pp. 183-186
-
-
Meng, L.1
Feldman, L.2
-
53
-
-
41849123521
-
Abundant class III acidic chitinase homologue in tamarind (Tamarindus indica) seed serves as the major storage protein
-
Rao DH, &, Gowda LR, (2008) Abundant class III acidic chitinase homologue in tamarind (Tamarindus indica) seed serves as the major storage protein. J Agric Food Chem 56, 2175-2182.
-
(2008)
J Agric Food Chem
, vol.56
, pp. 2175-2182
-
-
Rao, D.H.1
Gowda, L.R.2
-
54
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, &, Lipman DJ, (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
55
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, &, Gibson TJ, (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
56
-
-
38549107891
-
The 20 years of PROSITE
-
Hulo N, Bairoch A, Bulliard V, Cerutti L, Cuche BA, De Castro E, Lachaize C, Langendijk-Genevaux PS, &, Sigrist CJA, (2008) The 20 years of PROSITE. Nucleic Acids Res 36, D245-D249.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Hulo, N.1
Bairoch, A.2
Bulliard, V.3
Cerutti, L.4
Cuche, B.A.5
De Castro, E.6
Lachaize, C.7
Langendijk-Genevaux, P.S.8
Sigrist, C.J.A.9
-
57
-
-
0018087429
-
Comparison of reagents for determining the activated partial thromboplastin time
-
Hoffmann JJ, &, Meulendijk PN, (1978) Comparison of reagents for determining the activated partial thromboplastin time. Thromb Haemost 39, 640-645.
-
(1978)
Thromb Haemost
, vol.39
, pp. 640-645
-
-
Hoffmann, J.J.1
Meulendijk, P.N.2
-
58
-
-
0013860972
-
The prothrombin consumption time test
-
Quick AJ, (1966) The prothrombin consumption time test. Am J Clin Pathol 45, 105-109.
-
(1966)
Am J Clin Pathol
, vol.45
, pp. 105-109
-
-
Quick, A.J.1
-
59
-
-
72949116561
-
A new factor Xa inhibitor from Amblyomma cajennense with a unique domain composition
-
Batista IFC, Ramos OHP, Ventura JS, Junqueira-de-Azevedo ILM, Ho PL, &, Chudzinski-Tavassi AM, (2010) A new factor Xa inhibitor from Amblyomma cajennense with a unique domain composition. Arch Biochem Biophys 493, 151-156.
-
(2010)
Arch Biochem Biophys
, vol.493
, pp. 151-156
-
-
Batista, I.F.C.1
Ramos, O.H.P.2
Ventura, J.S.3
Junqueira-De-Azevedo, I.L.M.4
Ho, P.L.5
Chudzinski-Tavassi, A.M.6
-
60
-
-
0021259881
-
A chromogenic micro-assay for factor X-activity
-
Van Wijk EM, &, Smit JLJ, (1984) A chromogenic micro-assay for factor X-activity. Thromb Res 34, 263-268.
-
(1984)
Thromb Res
, vol.34
, pp. 263-268
-
-
Van Wijk, E.M.1
Smit, J.L.J.2
-
61
-
-
0029995558
-
Bauhinia serine proteinase inhibitors: Effect on factor X, factor XII and plasma kallikrein
-
Oliva ML, Sallai RC, Sampaio CA, Fritz H, Auerswald EA, Tanaka AS, Torquato RJ, &, Sampaio MU, (1996) Bauhinia serine proteinase inhibitors: effect on factor X, factor XII and plasma kallikrein. Immunopharmacology 32, 85-87.
-
(1996)
Immunopharmacology
, vol.32
, pp. 85-87
-
-
Oliva, M.L.1
Sallai, R.C.2
Sampaio, C.A.3
Fritz, H.4
Auerswald, E.A.5
Tanaka, A.S.6
Torquato, R.J.7
Sampaio, M.U.8
-
62
-
-
79951539248
-
Screening of elastase and tyrosinase inhibitory activity from Jeju Island plants
-
Moon JY, Yim EY, Song G, Lee NH, &, Hyun CG, (2010) Screening of elastase and tyrosinase inhibitory activity from Jeju Island plants. EurAsia J BioSci 4, 41-53.
-
(2010)
EurAsia J BioSci
, vol.4
, pp. 41-53
-
-
Moon, J.Y.1
Yim, E.Y.2
Song, G.3
Lee, N.H.4
Hyun, C.G.5
-
63
-
-
77049143386
-
The determination of enzyme inhibitor constants
-
Dixon M, (1953) The determination of enzyme inhibitor constants. Biochem J 55, 170-171.
-
(1953)
Biochem J
, vol.55
, pp. 170-171
-
-
Dixon, M.1
-
65
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z, &, Minor W, (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 276, 307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
66
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Bailey S, (1994) The CCP4 suite: programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 50, 760-763.
-
(1994)
Acta Crystallogr D Biol Crystallogr
, vol.50
, pp. 760-763
-
-
Bailey, S.1
-
67
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov GN, Vagin AA, &, Dodson EJ, (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D Biol Crystallogr 53, 240-255.
-
(1997)
Acta Crystallogr D Biol Crystallogr
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
68
-
-
13244281317
-
Coot: Model-building tools for molecular graphics
-
Emsley P, &, Cowtan K, (2004) Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 60, 2126-2132.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
69
-
-
77949535720
-
Features and development of Coot
-
Emsley P, Lohkamp B, Scott WG, &, Cowtan K, (2010) Features and development of Coot. Acta Crystallogr D Biol Crystallogr 66, 486-501.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
71
-
-
0032961270
-
ESPript: Analysis of multiple sequence alignments in PostScript
-
Gouet P, Courcelle E, &, Stuart DI, (1999) ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 15, 305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
-
72
-
-
0345832301
-
ClusPro: An automated docking and discrimination method for the prediction of protein complexes
-
Comeau SR, Gatchell DW, Vajda S, &, Camacho CJ, (2004) ClusPro: an automated docking and discrimination method for the prediction of protein complexes. Bioinformatics 20, 45-50.
-
(2004)
Bioinformatics
, vol.20
, pp. 45-50
-
-
Comeau, S.R.1
Gatchell, D.W.2
Vajda, S.3
Camacho, C.J.4
-
73
-
-
3242877815
-
ClusPro: A fully automated algorithm for protein-protein docking
-
Comeau SR, Gatchell DW, Vajda S, &, Camacho CJ, (2004) ClusPro: a fully automated algorithm for protein-protein docking. Nucleic Acids Res 32, W96-W99.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Comeau, S.R.1
Gatchell, D.W.2
Vajda, S.3
Camacho, C.J.4
-
74
-
-
0029923976
-
X-ray structure of active site-inhibited clotting factor Xa
-
Brandstetter H, Kühne A, Bode W, Huber R, Von der Saal W, Wirthensohn K, &, Engh RA, (1996) X-ray structure of active site-inhibited clotting factor Xa. J Biol Chem 271, 29988-29992.
-
(1996)
J Biol Chem
, vol.271
, pp. 29988-29992
-
-
Brandstetter, H.1
Kühne, A.2
Bode, W.3
Huber, R.4
Von Der Saal, W.5
Wirthensohn, K.6
Engh, R.A.7
-
76
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks GE, Hon G, Chandonia JM, &, Brenner SE, (2004) WebLogo: a sequence logo generator. Genome Res 14, 1188-1190.
-
(2004)
Genome Res
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
|