-
1
-
-
72949091232
-
Bacterial community variation in human body habitats across space and time
-
10.1126/science.1177486 19892944
-
Bacterial community variation in human body habitats across space and time. Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R, Science 2009 326 1694 1697 10.1126/science.1177486 19892944
-
(2009)
Science
, vol.326
, pp. 1694-1697
-
-
Costello, E.K.1
Lauber, C.L.2
Hamady, M.3
Fierer, N.4
Gordon, J.I.5
Knight, R.6
-
2
-
-
35348961403
-
An ecological and evolutionary perspective on humang-microbe mutualism and disease
-
DOI 10.1038/nature06245, PII NATURE06245
-
An ecological and evolutionary perspective on human-microbe mutualism and disease. Dethlefsen L, McFall-Ngai M, Relman DA, Nature 2007 449 811 818 10.1038/nature06245 17943117 (Pubitemid 47598621)
-
(2007)
Nature
, vol.449
, Issue.7164
, pp. 811-818
-
-
Dethlefsen, L.1
McFall-Ngai, M.2
Relman, D.A.3
-
3
-
-
20544444045
-
Microbiology: Diversity of the human intestinal microbial flora
-
DOI 10.1126/science.1110591
-
Diversity of the human intestinal microbial flora. Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, Sargent M, Gill SR, Nelson KE, Relman DA, Science 2005 308 1635 1638 10.1126/science.1110591 15831718 (Pubitemid 40807514)
-
(2005)
Science
, vol.308
, Issue.5728
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
Sargent, M.6
Gill, S.R.7
Nelson, K.E.8
Relman, D.A.9
-
4
-
-
46249085739
-
Evolution of mammals and their gut microbes
-
DOI 10.1126/science.1155725
-
Evolution of mammals and their gut microbes. Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, Bircher JS, Schlegel ML, Tucker TA, Schrenzel MD, Knight R, et al. Science 2008 320 1647 1651 10.1126/science.1155725 18497261 (Pubitemid 351931256)
-
(2008)
Science
, vol.320
, Issue.5883
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.J.4
Ramey, R.R.5
Bircher, J.S.6
Schlegel, M.L.7
Tucker, T.A.8
Schrenzel, M.D.9
Knight, R.10
Gordon, J.I.11
-
5
-
-
54949132083
-
Intestinal microbiota development in the premature neonate: Establishment of a lasting commensal relationship?
-
10.1111/j.1753-4887.2008.00119.x 19019028
-
Intestinal microbiota development in the premature neonate: establishment of a lasting commensal relationship? Mshvildadze M, Neu J, Mai V, Nutr Rev 2008 66 658 663 10.1111/j.1753-4887.2008.00119.x 19019028
-
(2008)
Nutr Rev
, vol.66
, pp. 658-663
-
-
Mshvildadze, M.1
Neu, J.2
Mai, V.3
-
6
-
-
77950669604
-
The effect of diet on the human gut microbiome: A metagenomic analysis in humanized gnotobiotic mice
-
The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Turnbaugh PJ, Ridaura VK, Faith JJ, Rey FE, Knight R, Gordon JI, Sci Transl Med 2009 1 6 14
-
(2009)
Sci Transl Med
, vol.1
, pp. 6-14
-
-
Turnbaugh, P.J.1
Ridaura, V.K.2
Faith, J.J.3
Rey, F.E.4
Knight, R.5
Gordon, J.I.6
-
7
-
-
78449296237
-
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
-
10.1073/pnas.1007028107 20937875
-
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors. Benson AK, Kelly SA, Legge R, Ma F, Low SJ, Kim J, Zhang M, Oh PL, Nehrenberg D, Hua K, et al. Proc Natl Acad Sci USA 2010 107 18933 18938 10.1073/pnas.1007028107 20937875
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 18933-18938
-
-
Benson, A.K.1
Kelly, S.A.2
Legge, R.3
Ma, F.4
Low, S.J.5
Kim, J.6
Zhang, M.7
Oh, P.L.8
Nehrenberg, D.9
Hua, K.10
-
8
-
-
80052808115
-
Predominant Effect of Host Genetics on Levels of Lactobacillus johnsonii bacteria in the Mouse Gut
-
in press
-
Predominant Effect of Host Genetics on Levels of Lactobacillus johnsonii bacteria in the Mouse Gut. Buhnik-Rosenblau K, Danin-Poleg Y, Kashi Y, Appl Environ Microbiol 2011 in press
-
(2011)
Appl Environ Microbiol
-
-
Buhnik-Rosenblau, K.1
Danin-Poleg, Y.2
Kashi, Y.3
-
9
-
-
51849086745
-
Predominant Role of Host Genetics in Controlling the Composition of Gut Microbiota
-
10.1371/journal.pone.0003064 18725973
-
Predominant Role of Host Genetics in Controlling the Composition of Gut Microbiota. Khachatryan ZA, Ktsoyan ZA, Manukyan GP, Kelly D, Ghazaryan KA, Aminov RI, PLoS One 2008 3 3064 10.1371/journal.pone.0003064 18725973
-
(2008)
PLoS One
, vol.3
, pp. 53064
-
-
Khachatryan, Z.A.1
Ktsoyan, Z.A.2
Manukyan, G.P.3
Kelly, D.4
Ghazaryan, K.A.5
Aminov, R.I.6
-
10
-
-
79952748287
-
Unravelling the effects of the environment and host genotype on the gut microbiome
-
10.1038/nrmicro2540 21407244
-
Unravelling the effects of the environment and host genotype on the gut microbiome. Spor A, Koren O, Ley R, Nat Rev Microbiol 2011 9 279 290 10.1038/nrmicro2540 21407244
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 279-290
-
-
Spor, A.1
Koren, O.2
Ley, R.3
-
11
-
-
0034814007
-
The host genotype affects the bacterial community in the human gastrointestinal tract
-
DOI 10.1080/089106001750462669
-
The host genotype affects the bacterial community in the human gastrointestinal tract. Zoetendal EG, Akkermans ADL, Akkermans-van Vliet WM, de Visser JAGM, de Vos WM, Microbial ecol Health Dis 2001 13 129 134 10.1080/089106001750462669 (Pubitemid 32905860)
-
(2001)
Microbial Ecology in Health and Disease
, vol.13
, Issue.3
, pp. 129-134
-
-
Zoetendal, E.G.1
Akkermans, A.D.L.2
Akkermans-Van Vliet, W.M.3
De Visser, J.A.G.M.4
De Vos, W.M.5
-
12
-
-
77249179697
-
Guidance for Substantiating the Evidence for Beneficial Effects of Probiotics: Probiotics in Chronic Inflammatory Bowel Disease and the Functional Disorder Irritable Bowel Syndrome
-
10.3945/jn.109.113746 20107148
-
Guidance for Substantiating the Evidence for Beneficial Effects of Probiotics: Probiotics in Chronic Inflammatory Bowel Disease and the Functional Disorder Irritable Bowel Syndrome. Haller D, Antoine JM, Bengmark S, Erick P, Rijkers GT, Lenoir-Wijnkoop I, J Nutr 2010 140 690S 697S 10.3945/jn.109.113746 20107148
-
(2010)
J Nutr
, vol.140
-
-
Haller, D.1
Antoine, J.M.2
Bengmark, S.3
Erick, P.4
Rijkers, G.T.5
Lenoir-Wijnkoop, I.6
-
13
-
-
84964693380
-
Treatment and prevention of pouchitis after ileal pouch-anal anastomosis for chronic ulcerative colitis
-
20556748
-
Treatment and prevention of pouchitis after ileal pouch-anal anastomosis for chronic ulcerative colitis. Holubar SD, Cima RR, Sandborn WJ, Pardi DS, Cochrane Database Syst Rev 2010 6 D001176 20556748
-
(2010)
Cochrane Database Syst Rev
, vol.6
-
-
Holubar, S.D.1
Cima, R.R.2
Sandborn, W.J.3
Pardi, D.S.4
-
14
-
-
77249173797
-
Guidance for Substantiating the Evidence for Beneficial Effects of Probiotics: Prevention and Management of Allergic Diseases by Probiotics
-
10.3945/jn.109.113761 20130079
-
Guidance for Substantiating the Evidence for Beneficial Effects of Probiotics: Prevention and Management of Allergic Diseases by Probiotics. Kalliomaki M, Antoine JM, Herz U, Rijkers GT, Wells JM, Mercenier A, J Nutr 2010 140 713S 721S 10.3945/jn.109.113761 20130079
-
(2010)
J Nutr
, vol.140
-
-
Kalliomaki, M.1
Antoine, J.M.2
Herz, U.3
Rijkers, G.T.4
Wells, J.M.5
Mercenier, A.6
-
15
-
-
77749233899
-
Role of probiotics in pediatric patients with Helicobacter pylori infection: A comprehensive review of the literature
-
10.1111/j.1523-5378.2009.00743.x 20402810
-
Role of probiotics in pediatric patients with Helicobacter pylori infection: a comprehensive review of the literature. Lionetti E, Indrio F, Pavone L, Borrelli G, Cavallo L, Francavilla R, Helicobacter 2010 15 79 87 10.1111/j.1523-5378.2009.00743.x 20402810
-
(2010)
Helicobacter
, vol.15
, pp. 79-87
-
-
Lionetti, E.1
Indrio, F.2
Pavone, L.3
Borrelli, G.4
Cavallo, L.5
Francavilla, R.6
-
16
-
-
77249101573
-
Guidance for Substantiating the Evidence for Beneficial Effects of Probiotics: Prevention and Management of Infections by Probiotics
-
10.3945/jn.109.113753 20107143
-
Guidance for Substantiating the Evidence for Beneficial Effects of Probiotics: Prevention and Management of Infections by Probiotics. Wolvers D, Antoine JM, Myllyluoma E, Schrezenmeir J, Szajewska H, Rijkers GT, J Nutr 2010 140 698S 712S 10.3945/jn.109.113753 20107143
-
(2010)
J Nutr
, vol.140
-
-
Wolvers, D.1
Antoine, J.M.2
Myllyluoma, E.3
Schrezenmeir, J.4
Szajewska, H.5
Rijkers, G.T.6
-
17
-
-
33847673288
-
The genus Lactobacillus - A genomic basis for understanding its diversity
-
DOI 10.1111/j.1574-6968.2006.00596.x
-
The genus Lactobacillus-a genomic basis for understanding its diversity. Claesson MJ, van Sinderen D, O'Toole PW, FEMS Microbiol Lett 2007 269 22 28 10.1111/j.1574-6968.2006.00596.x 17343688 (Pubitemid 46354133)
-
(2007)
FEMS Microbiology Letters
, vol.269
, Issue.1
, pp. 22-28
-
-
Claesson, M.J.1
Van Sinderen, D.2
O'Toole, P.W.3
-
19
-
-
35448990071
-
Biological and genetic classification of canine intestinal lactic acid bacteria and bifidobacteria
-
Biological and genetic classification of canine intestinal lactic acid bacteria and bifidobacteria. Kim SY, Adachi Y, Microbiol Immunol 2007 51 919 928 17951981 (Pubitemid 47623406)
-
(2007)
Microbiology and Immunology
, vol.51
, Issue.10
, pp. 919-928
-
-
Kim, S.-Y.1
Adachi, Y.2
-
20
-
-
0345868847
-
Genotypic and Phenotypic Studies of Murine Intestinal Lactobacilli: Species Differences in Mice with and without Colitis
-
DOI 10.1128/AEM.70.1.558-568.2004
-
Genotypic and phenotypic studies of murine intestinal lactobacilli: Species differences in mice with and without colitis. Pena JA, Li SY, Wilson PH, Thibodeau SA, Szary AJ, Versalovic J, Appl Environ Microbiol 2004 70 558 568 10.1128/AEM.70.1.558-568.2004 14711688 (Pubitemid 38090249)
-
(2004)
Applied and Environmental Microbiology
, vol.70
, Issue.1
, pp. 558-568
-
-
Pena, J.A.1
Li, S.Y.2
Wilson, P.H.3
Thibodeau, S.A.4
Szary, A.J.5
Versalovic, J.6
-
21
-
-
70350520168
-
Comparison and Utilization of Repetitive-Element PCR Techniques for Typing Lactobacillus Isolates from the Chicken Gastrointestinal Tract
-
10.1128/AEM.01150-09 19749057
-
Comparison and Utilization of Repetitive-Element PCR Techniques for Typing Lactobacillus Isolates from the Chicken Gastrointestinal Tract. Stephenson DP, Moore RJ, Allison GE, Appl Environ Microbiol 2009 75 6764 6776 10.1128/AEM.01150-09 19749057
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 6764-6776
-
-
Stephenson, D.P.1
Moore, R.J.2
Allison, G.E.3
-
22
-
-
78449269822
-
Properties of different lactic acid bacteria isolated from Apis mellifera L. bee-gut
-
10.1016/j.micres.2010.01.003 20116222
-
Properties of different lactic acid bacteria isolated from Apis mellifera L. bee-gut. Audisio MC, Torres MJ, Sabate DC, Ibarguren C, Apella MC, Microbiol Res 2011 166 1 13 10.1016/j.micres.2010.01.003 20116222
-
(2011)
Microbiol Res
, vol.166
, pp. 1-13
-
-
Audisio, M.C.1
Torres, M.J.2
Sabate, D.C.3
Ibarguren, C.4
Apella, M.C.5
-
23
-
-
36549019564
-
Characterization of dominant cultivable lactobacilli and their antibiotic resistance profiles from faecal samples of weaning piglets
-
DOI 10.1111/j.1365-2672.2007.03483.x
-
Characterization of dominant cultivable lactobacilli and their antibiotic resistance profiles from faecal samples of weaning piglets. Korhonen JM, Sclivagnotis Y, von Wright A, J Appl Microbiol 2007 103 2496 2503 10.1111/j.1365-2672.2007.03483.x 18045434 (Pubitemid 350191179)
-
(2007)
Journal of Applied Microbiology
, vol.103
, Issue.6
, pp. 2496-2503
-
-
Korhonen, J.M.1
Sclivagnotis, Y.2
Wright, A.V.3
-
24
-
-
67651249866
-
Biochemical Properties of Two Cinnamoyl Esterases Purified from a Lactobacillus johnsonii Strain Isolated from Stool Samples of Diabetes-Resistant Rats
-
10.1128/AEM.02837-08 19502437
-
Biochemical Properties of Two Cinnamoyl Esterases Purified from a Lactobacillus johnsonii Strain Isolated from Stool Samples of Diabetes-Resistant Rats. Lai KK, Lorca GL, Gonzalez CF, Appl Environ Microbiol 2009 75 5018 5024 10.1128/AEM.02837-08 19502437
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5018-5024
-
-
Lai, K.K.1
Lorca, G.L.2
Gonzalez, C.F.3
-
25
-
-
33947394375
-
Identification of lactobacilli isolated from the cloaca and vagina of laying hens and characterization for potential use as probiotics to control Salmonella Enteritidis
-
DOI 10.1111/j.1365-2672.2006.03164.x
-
Identification of lactobacilli isolated from the cloaca and vagina of laying hens and characterization for potential use as probiotics to control Salmonella Enteritidis. Van Coillie E, Goris J, Cleenwerck I, Grijspeerdt K, Botteldoorn N, Van Immerseel F, De Buck J, Vancanneyt M, Swings J, Herman L, et al. J Appl Microbiol 2007 102 1095 1106 17381753 (Pubitemid 46457487)
-
(2007)
Journal of Applied Microbiology
, vol.102
, Issue.4
, pp. 1095-1106
-
-
Van Coillie, E.1
Goris, J.2
Cleenwerck, I.3
Grijspeerdt, K.4
Botteldoorn, N.5
Van Immerseel, F.6
De Buck, J.7
Vancanneyt, M.8
Swings, J.9
Herman, L.10
Heyndrickx, M.11
-
26
-
-
33846707341
-
Adhesive and chemokine stimulatory properties of potentially probiotic Lactobacillus strains
-
Adhesive and chemokine stimulatory properties of potentially probiotic Lactobacillus strains. Pinto MGV, Schuster T, Briviba K, Watzl B, Holzapfel WH, Franz CMAP, J Food Protection 2007 70 125 134 (Pubitemid 46191875)
-
(2007)
Journal of Food Protection
, vol.70
, Issue.1
, pp. 125-134
-
-
Vizoso Pinto, M.G.1
Schuster, T.2
Briviba, K.3
Watzl, B.4
Holzapfel, W.H.5
Franz, C.M.A.P.6
-
27
-
-
0032478228
-
Characterisation and selection of probiotic lactobacilli for a preliminary minipig feeding trial and their effect on serum cholesterol levels, faeces pH and faeces moisture content
-
DOI 10.1016/S0168-1605(98)00024-5, PII S0168160598000245
-
Characterisation and selection of probiotic lactobacilli for a preliminary minipig feeding trial and their effect on serum cholesterol levels, faeces pH and faeces moisture content. du Toit M, Franz CMAP, Dicks LMT, Schillinger U, Haberer P, Warlies B, Ahrens F, Holzapfel WH, Int J Food Microbiol 1998 40 93 104 10.1016/S0168-1605(98)00024-5 9600615 (Pubitemid 28185198)
-
(1998)
International Journal of Food Microbiology
, vol.40
, Issue.1-2
, pp. 93-104
-
-
Du Toit, M.1
Franz, C.M.A.P.2
Dicks, L.M.T.3
Schillinger, U.4
Haberer, P.5
Warlies, B.6
Ahrens, F.7
Holzapfel, W.H.8
-
28
-
-
1542299680
-
In vivo characterization of Lactobacillus johnsonii FI9785 for use as a defined competitive exclusion agent against bacterial pathogens in poultry
-
DOI 10.1111/j.1472-765X.2004.01474.x
-
In vivo characterization of Lactobacillus johnsonii FI9785 for use as a defined competitive exclusion agent against bacterial pathogens in poultry. La Ragione RM, Narbad A, Gasson MJ, Woodward MJ, Lett Appl Microbiol 2004 38 197 205 10.1111/j.1472-765X.2004.01474.x 14962040 (Pubitemid 38297054)
-
(2004)
Letters in Applied Microbiology
, vol.38
, Issue.3
, pp. 197-205
-
-
La Ragione, R.M.1
Narbad, A.2
Gasson, M.J.3
Woodward, M.J.4
-
29
-
-
10744220291
-
The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsionii NCC 533
-
DOI 10.1073/pnas.0307327101
-
The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533. Pridmore RD, Berger B, Desiere F, Vilanova D, Barretto C, Pittet AC, Zwahlen MC, Rouvet M, Altermann E, Barrangou R, et al. Proc Nat Acad Sci U S A 2004 101 2512 2517 10.1073/pnas.0307327101 (Pubitemid 38269342)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.8
, pp. 2512-2517
-
-
Pridmore, R.D.1
Berger, B.2
Desiere, F.3
Vilanova, D.4
Barretto, C.5
Pittet, A.-C.6
Zwahlen, M.-C.7
Rouvet, M.8
Altermann, E.9
Barrangou, R.10
Mollet, B.11
Mercenier, A.12
Klaenhammer, T.13
Arigoni, F.14
Schell, M.A.15
-
30
-
-
33846931503
-
Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics
-
DOI 10.1128/JB.01393-06
-
Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics. Berger B, Pridmore RD, Barretto C, Delmas-Julien F, Schreiber K, Arigoni F, Brussow H, J Bacteriol 2007 189 1311 1321 10.1128/JB.01393-06 17142402 (Pubitemid 46239752)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.4
, pp. 1311-1321
-
-
Berger, B.1
Pridmore, R.D.2
Barretto, C.3
Delmas-Julien, F.4
Schreiber, K.5
Arigoni, F.6
Brussow, H.7
-
31
-
-
0242573212
-
Detection and Identification of Lactobacillus Species in Crops of Broilers of Different Ages by Using PCR-Denaturing Gradient Gel Electrophoresis and Amplified Ribosomal DNA Restriction Analysis
-
DOI 10.1128/AEM.69.11.6750-6757.2003
-
Detection and identification of Lactobacillus species in crops of broilers of different ages by using PCR-denaturing gradient gel electrophoresis and amplified ribosomal DNA restriction analysis. Guan LL, Hagen KE, Tannock GW, Korver DR, Fasenko GM, Allison GE, Appl Environ Microbiol 2003 69 6750 6757 10.1128/AEM.69.11.6750-6757.2003 14602636 (Pubitemid 37420213)
-
(2003)
Applied and Environmental Microbiology
, vol.69
, Issue.11
, pp. 6750-6757
-
-
Guan, L.L.1
Hagen, K.E.2
Tannock, G.W.3
Korver, D.R.4
Fasenko, G.M.5
Allison, G.E.6
-
32
-
-
0033832668
-
Use of the DNA sequence of variable regions of the 16S rRNA gene for rapid and accurate identification of bacteria in the Lactobacillus acidophilus complex
-
10.1046/j.1365-2672.2000.01146.x 11021584
-
Use of the DNA sequence of variable regions of the 16S rRNA gene for rapid and accurate identification of bacteria in the Lactobacillus acidophilus complex. Kullen MJ, Sanozky-Dawes RB, Crowell DC, Klaenhammer TR, J Appl Microbiol 2000 89 511 516 10.1046/j.1365-2672.2000.01146.x 11021584
-
(2000)
J Appl Microbiol
, vol.89
, pp. 511-516
-
-
Kullen, M.J.1
Sanozky-Dawes, R.B.2
Crowell, D.C.3
Klaenhammer, T.R.4
-
33
-
-
0037126645
-
Specific identification and molecular typing analysis of Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis
-
DOI 10.1016/S0378-1097(02)01070-4, PII S0378109702010704
-
Specific identification and molecular typing analysis of Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis. Ventura M, Zink R, FEMS Microbiol Lett 2002 217 141 154 10.1111/j.1574-6968. 2002.tb11468.x 12480097 (Pubitemid 35441299)
-
(2002)
FEMS Microbiology Letters
, vol.217
, Issue.2
, pp. 141-154
-
-
Ventura, M.1
Zink, R.2
-
34
-
-
38349175824
-
Global Genetic Population Structure of Bacillus anthracis
-
10.1371/journal.pone.0000461 17520020
-
Global Genetic Population Structure of Bacillus anthracis. Van Ert MN, Easterday WR, Huynh LY, Okinaka RT, Hugh-Jones ME, Ravel J, Zanecki SR, Pearson T, Simonson TS, U'Ren JM, et al. PLoS One 2007 2 461 10.1371/journal.pone. 0000461 17520020
-
(2007)
PLoS One
, vol.2
, pp. 5461
-
-
Van Ert, M.N.1
Easterday, W.R.2
Huynh, L.Y.3
Okinaka, R.T.4
Hugh-Jones, M.E.5
Ravel, J.6
Zanecki, S.R.7
Pearson, T.8
Simonson, T.S.9
U'Ren, J.M.10
-
35
-
-
33947245586
-
Vibrio cholerae strain typing and phylogeny study based on simple sequence repeats
-
DOI 10.1128/JCM.01895-06
-
Vibrio cholerae strain typing and phylogeny study based on simple sequence repeats. Danin-Poleg Y, Cohen LA, Gancz H, Broza YY, Goldshmidt H, Malul E, Valinsky L, Lerner L, Broza M, Kashi Y, J Clin Microbiol 2007 45 736 746 10.1128/JCM.01895-06 17182751 (Pubitemid 46427686)
-
(2007)
Journal of Clinical Microbiology
, vol.45
, Issue.3
, pp. 736-746
-
-
Danin-Poleg, Y.1
Cohen, L.A.2
Gancz, H.3
Broza, Y.Y.4
Goldshmidt, H.5
Malul, E.6
Valinsky, L.7
Lerner, L.8
Broza, M.9
Kashi, Y.10
-
36
-
-
0031838719
-
Short-sequence DNA repeats in prokaryotic genomes
-
Short-sequence DNA repeats in prokaryotic genomes. van Belkum A, Scherer S, van Alphen L, Verbrugh H, Microbiol Mol Biol Rev 1998 62 275 293 9618442 (Pubitemid 28270275)
-
(1998)
Microbiology and Molecular Biology Reviews
, vol.62
, Issue.2
, pp. 275-293
-
-
Van Belkum, A.1
Scherer, S.2
Van Alphen, L.3
Verbrugh, H.4
-
37
-
-
69949104605
-
Variable-Number Tandem Repeat Analysis and Multilocus Sequence Typing Data Confirm the Epidemiological Changes Observed with Staphylococcus aureus Strains Isolated from Bloodstream Infections
-
10.1128/JCM.00780-09 19625476
-
Variable-Number Tandem Repeat Analysis and Multilocus Sequence Typing Data Confirm the Epidemiological Changes Observed with Staphylococcus aureus Strains Isolated from Bloodstream Infections. Mee-Marquet N, Francois P, Domelier AS, Arnault L, Girard N, Schrenzel J, Quentin R, J Clin Microbiol 2009 47 2863 2871 10.1128/JCM.00780-09 19625476
-
(2009)
J Clin Microbiol
, vol.47
, pp. 2863-2871
-
-
Mee-Marquet, N.1
Francois, P.2
Domelier, A.S.3
Arnault, L.4
Girard, N.5
Schrenzel, J.6
Quentin, R.7
-
38
-
-
0141817852
-
Multi-locus sequence typing: A tool for global epidemiology
-
DOI 10.1016/j.tim.2003.08.006
-
Multi-locus sequence typing: a tool for global epidemiology. Urwin R, Maiden MCJ, Trends Microbiol 2003 11 479 487 10.1016/j.tim.2003.08.006 14557031 (Pubitemid 37214875)
-
(2003)
Trends in Microbiology
, vol.11
, Issue.10
, pp. 479-487
-
-
Urwin, R.1
Maiden, M.C.J.2
-
39
-
-
1542286776
-
Mammalian housekeeping genes evolve more slowly than tissue-specific genes
-
14595094
-
Mammalian housekeeping genes evolve more slowly than tissue-specific genes. Zhang LQ, Li WH, Mol Biol Evol 2004 21 236 239 14595094
-
(2004)
Mol Biol Evol
, vol.21
, pp. 236-239
-
-
Zhang, L.Q.1
Li, W.H.2
-
40
-
-
6044244615
-
'Conserved hypothetical' proteins: Prioritization of targets for experimental study
-
DOI 10.1093/nar/gkh885
-
'Conserved hypothetical' proteins: prioritization of targets for experimental study. Galperin MY, Koonin EV, Nucleic Acids Res 2004 32 5452 5463 10.1093/nar/gkh885 15479782 (Pubitemid 39545662)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.18
, pp. 5452-5463
-
-
Galperin, M.Y.1
Koonin, E.V.2
-
41
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
DOI 10.1016/j.cell.2006.02.017, PII S0092867406001929
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine. Ley RE, Peterson DA, Gordon JI, Cell 2006 124 837 848 10.1016/j.cell.2006.02.017 16497592 (Pubitemid 43261456)
-
(2006)
Cell
, vol.124
, Issue.4
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
42
-
-
33846207822
-
Adaptive immunity: Care for the community
-
DOI 10.1038/445153a, PII 445153A
-
Adaptive immunity-Care for the community. McFall-Ngai M, Nature 2007 445 153 10.1038/445153a 17215830 (Pubitemid 46095705)
-
(2007)
Nature
, vol.445
, Issue.7124
, pp. 153
-
-
McFall-Ngai, M.1
-
43
-
-
59849113547
-
Microbes in Gastrointestinal Health and Disease
-
10.1053/j.gastro.2008.10.080 19026645
-
Microbes in Gastrointestinal Health and Disease. Neish AS, Gastroenterology 2009 136 65 80 10.1053/j.gastro.2008.10.080 19026645
-
(2009)
Gastroenterology
, vol.136
, pp. 65-80
-
-
Neish, A.S.1
-
44
-
-
77149149718
-
Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution
-
10.1038/ismej.2009.123 19924154
-
Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution. Oh PL, Benson AK, Peterson DA, Patil PB, Moriyama EN, Roos S, Walter J, ISME J 2010 4 377 387 10.1038/ismej.2009.123 19924154
-
(2010)
ISME J
, vol.4
, pp. 377-387
-
-
Oh, P.L.1
Benson, A.K.2
Peterson, D.A.3
Patil, P.B.4
Moriyama, E.N.5
Roos, S.6
Walter, J.7
-
45
-
-
49649111434
-
Role of microorganisms in the evolution of animals and plants: The hologenome theory of evolution
-
10.1111/j.1574-6976.2008.00123.x 18549407
-
Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution. Zilber-Rosenberg I, Rosenberg E, FEMS Microbiol Rev 2008 32 723 735 10.1111/j.1574-6976.2008.00123.x 18549407
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 723-735
-
-
Zilber-Rosenberg, I.1
Rosenberg, E.2
-
46
-
-
34547129847
-
Development of the human infant intestinal microbiota
-
DOI 10.1371/journal.pbio.0050177
-
Development of the human infant intestinal microbiota. Palmer C, Bik EM, DiGiulio DB, Relman DA, Brown PO, PLoS Biol 2007 5 1556 1573 (Pubitemid 47105346)
-
(2007)
PLoS Biology
, vol.5
, Issue.7
, pp. 1556-1573
-
-
Palmer, C.1
Bik, E.M.2
DiGiulio, D.B.3
Relman, D.A.4
Brown, P.O.5
-
47
-
-
72149101584
-
-
Semyonov D, Ramon O, Kaplun Z, levin-Brener L, Gurevich N, Shimoni E, Food Res Int 2009 43 193 202
-
(2009)
Food Res Int
, vol.43
, pp. 193-202
-
-
Semyonov, D.1
Ramon, O.2
Kaplun, Z.3
Levin-Brener, L.4
Gurevich, N.5
Shimoni, E.6
-
48
-
-
0037281247
-
Terminal restriction fragment length polymorphism analysis for human fecal microbiota and its application for analysis of complex bifidobacterial communities
-
Terminal restriction fragment length polymorphism analysis for human fecal microbiota and its application for analysis of complex bifidobacterial communities. Sakamoto M, Hayashi H, benno Y, Microbiol Immunol 2002 47 133 142 (Pubitemid 36240892)
-
(2003)
Microbiology and Immunology
, vol.47
, Issue.2
, pp. 133-142
-
-
Sakamoto, M.1
Hayashi, H.2
Benno, Y.3
-
49
-
-
1842455190
-
In silico analysis of complete bacterial genomes: PCR, AFLP-PCR and endonuclease restriction
-
DOI 10.1093/bioinformatics/btg491
-
In silico analysis of complete bacterial genomes: PCR, AFLP-PCR and endonuclease restriction. Bikandi J, San Millan R, Rementeria A, Garaizar J, Bioinformatics 2004 20 798 799 10.1093/bioinformatics/btg491 14752001 (Pubitemid 38443838)
-
(2004)
Bioinformatics
, vol.20
, Issue.5
, pp. 798-799
-
-
Bikandi, J.1
Millan, R.S.2
Rementeria, A.3
Garaizar, J.4
-
50
-
-
0033972529
-
Simple sequence repeats in Escherichia coli: Abundance, distribution, composition, and polymorphism
-
Simple sequence repeats in Escherichia coli: Abundance, distribution, composition, and polymorphism. Gur-Arie R, Cohen CJ, Eitan Y, Shelef L, Hallerman EM, Kashi Y, Genome Res 2000 10 62 71 10645951 (Pubitemid 30095256)
-
(2000)
Genome Research
, vol.10
, Issue.1
, pp. 62-71
-
-
Gur-Arie, R.1
Cohen, C.J.2
Eitan, Y.3
Shelef, L.4
Hallerman, E.M.5
Kashi, Y.6
-
51
-
-
25644460030
-
Finding approximate tandem repeats in genomic sequences
-
DOI 10.1089/cmb.2005.12.928
-
Finding approximate tandem repeats in genomic sequences. Wexler Y, Yakhini Z, Kashi Y, Geiger D, J Comput Biol 2005 12 928 942 10.1089/cmb.2005.12. 928 16201913 (Pubitemid 41384389)
-
(2005)
Journal of Computational Biology
, vol.12
, Issue.7
, pp. 928-942
-
-
Wexler, Y.1
Yakhini, Z.2
Kashi, Y.3
Geiger, D.4
-
52
-
-
21244486272
-
Species-specific oligonucleotide probes for the detection and identification of Lactobacillus isolated from mouse faeces
-
DOI 10.1111/j.1365-2672.2005.02584.x
-
Species-specific oligonucleotide probes for the detection and identification of Lactobacillus isolated from mouse faeces. Park SH, Itoh K, J Appl Microbiol 2005 99 51 57 10.1111/j.1365-2672.2005.02584.x 15960664 (Pubitemid 40896989)
-
(2005)
Journal of Applied Microbiology
, vol.99
, Issue.1
, pp. 51-57
-
-
Park, S.H.1
Itoh, K.2
-
53
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Clustal-W-Improving the Sensitivity of Progressive Multiple Sequence Alignment Through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice. Thompson JD, Higgins DG, Gibson TJ, Nucleic Acids Res 1994 22 4673 4680 10.1093/nar/22.22.4673 7984417 (Pubitemid 24354800)
-
(1994)
Nucleic Acids Research
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
54
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
DOI 10.1093/molbev/msm092
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Tamura K, Dudley J, Nei M, Kumar S, Mol Biol Evol 2007 24 1596 1599 10.1093/molbev/msm092 17488738 (Pubitemid 47236692)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
|