-
1
-
-
0037669238
-
The future of energy policy
-
Wirth, T. E.; Gray, C. B.; Podesta, J. D. The future of energy policy Foreign Affairs 2003, 82, 132-155
-
(2003)
Foreign Affairs
, vol.82
, pp. 132-155
-
-
Wirth, T.E.1
Gray, C.B.2
Podesta, J.D.3
-
2
-
-
21644454468
-
What Can Replace Cheap Oil - And When?
-
Kerr, R. A.; Service, R. F. What Can Replace Cheap Oil - and When? Science 2005, 309, 101
-
(2005)
Science
, vol.309
, pp. 101
-
-
Kerr, R.A.1
Service, R.F.2
-
3
-
-
33746655320
-
Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels
-
Hill, J.; Nelson, E.; Tilman, D.; Polasky, S.; Tiffany, D. Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 11206-11210
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 11206-11210
-
-
Hill, J.1
Nelson, E.2
Tilman, D.3
Polasky, S.4
Tiffany, D.5
-
4
-
-
80053549968
-
Agriculture-based renewable energy production.
-
Order Code RL 32712
-
Schnepf, R. Agriculture-based renewable energy production. CRS Report for Congress, Order Code RL 32712, 2006.
-
(2006)
CRS Report for Congress
-
-
Schnepf, R.1
-
5
-
-
31544462628
-
Ethanol can contribute to energy and environmental goals
-
Farrell, A. E.; Plevin, R. J.; Turner, B. T.; Jones, A. D.; O'Hare, M.; Kammen, D. M. Ethanol can contribute to energy and environmental goals Science 2006, 311, 506-508
-
(2006)
Science
, vol.311
, pp. 506-508
-
-
Farrell, A.E.1
Plevin, R.J.2
Turner, B.T.3
Jones, A.D.4
O'Hare, M.5
Kammen, D.M.6
-
6
-
-
0942288120
-
Bacteria engineered for fuel ethanol production: Current status
-
Dien, B. S.; Cotta, M. A.; Jeffries, T. W. Bacteria engineered for fuel ethanol production: current status Appl. Microbiol. Biotechnol. 2003, 63 (3) 258-266
-
(2003)
Appl. Microbiol. Biotechnol.
, vol.63
, Issue.3
, pp. 258-266
-
-
Dien, B.S.1
Cotta, M.A.2
Jeffries, T.W.3
-
7
-
-
35348909205
-
Biofuels from microbes
-
Antoni, D.; Zverlov, V. V.; Schwarz, W. H. Biofuels from microbes Appl. Microbiol. Biotechnol. 2007, 77, 23-35
-
(2007)
Appl. Microbiol. Biotechnol.
, vol.77
, pp. 23-35
-
-
Antoni, D.1
Zverlov, V.V.2
Schwarz, W.H.3
-
8
-
-
79953139204
-
Engineering cyanobacteria for fuels and chemicals production
-
Zhou, J.; Li, Y. Engineering cyanobacteria for fuels and chemicals production Protein Cell 2010, 1 (3) 207-210
-
(2010)
Protein Cell
, vol.1
, Issue.3
, pp. 207-210
-
-
Zhou, J.1
Li, Y.2
-
9
-
-
77949873448
-
Hemicelluloses for fuel ethanol: A review
-
Gírio, F. M.; Fonseca, C.; Carvalheiro, F.; Duarte, L. C.; Marques, S.; Bogel-Åukasik, R. Hemicelluloses for fuel ethanol: A review Bioresour. Technol. 2010, 101 (13) 4775-4800
-
(2010)
Bioresour. Technol.
, vol.101
, Issue.13
, pp. 4775-4800
-
-
Gírio, F.M.1
Fonseca, C.2
Carvalheiro, F.3
Duarte, L.C.4
Marques, S.5
Bogel-Åukasik, R.6
-
10
-
-
80052647009
-
Metabolic engineering of microbial pathways for advanced biofuels production
-
Zhang, F.; Rodriguez, S.; Keasling, J. D. Metabolic engineering of microbial pathways for advanced biofuels production Curr. Opin. Biotechnol. 2011, 22 (6) 775-783
-
(2011)
Curr. Opin. Biotechnol.
, vol.22
, Issue.6
, pp. 775-783
-
-
Zhang, F.1
Rodriguez, S.2
Keasling, J.D.3
-
11
-
-
79957996656
-
Advances in ethanol production
-
Geddes, C. C.; Nieves, I. U.; Ingram, L. O. Advances in ethanol production Curr. Opin. Biotechnol. 2011, 22 (3) 312-319
-
(2011)
Curr. Opin. Biotechnol.
, vol.22
, Issue.3
, pp. 312-319
-
-
Geddes, C.C.1
Nieves, I.U.2
Ingram, L.O.3
-
12
-
-
0018409915
-
Generic assignments, strain histories and properties of pure cultures of cyanobacteria
-
Rippka, R.; Deruelles, J.; Waterbury, J. B.; Herdman, M.; Stanier, R. Y. Generic assignments, strain histories and properties of pure cultures of cyanobacteria J. Gen. Microbiol. 1979, 111, 1-61
-
(1979)
J. Gen. Microbiol.
, vol.111
, pp. 1-61
-
-
Rippka, R.1
Deruelles, J.2
Waterbury, J.B.3
Herdman, M.4
Stanier, R.Y.5
-
13
-
-
79952744660
-
Rewiring hydrogenase-dependent redox circuits in cyanobacteria
-
Ducat, D.; Sachdeva, G.; Silver, P. Rewiring hydrogenase-dependent redox circuits in cyanobacteria Proc. Natl. Acad. Sci. U.S.A. 2011, 108, 3941-3946
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 3941-3946
-
-
Ducat, D.1
Sachdeva, G.2
Silver, P.3
-
14
-
-
79954417122
-
A new dawn for industrial photosynthesis
-
Robertson, D. E.; Jacobson, S. A.; Morgan, F.; Berry, D.; Church, G. M.; Afeyan, N. B. A new dawn for industrial photosynthesis Photosynth. Res. 2011, 107, 269-277
-
(2011)
Photosynth. Res.
, vol.107
, pp. 269-277
-
-
Robertson, D.E.1
Jacobson, S.A.2
Morgan, F.3
Berry, D.4
Church, G.M.5
Afeyan, N.B.6
-
15
-
-
79960730607
-
Renewable energy from Cyanobacteria: Energy production optimization by metabolic pathway engineering
-
Quintana, N.; Van der Kooy, F.; Van de Rhee, M. D.; Voshol, G. P.; Verpoorte, R. Renewable energy from Cyanobacteria: energy production optimization by metabolic pathway engineering Appl. Microbiol. Biotechnol. 2011, 91, 471-490
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.91
, pp. 471-490
-
-
Quintana, N.1
Van Der Kooy, F.2
Van De Rhee, M.D.3
Voshol, G.P.4
Verpoorte, R.5
-
17
-
-
81155161902
-
Cyanobacterial genomics for ecology and biotechnology
-
Hess, W. R. Cyanobacterial genomics for ecology and biotechnology Curr. Opin. Microbiol. 2011, 14, 608-614
-
(2011)
Curr. Opin. Microbiol.
, vol.14
, pp. 608-614
-
-
Hess, W.R.1
-
18
-
-
84856503492
-
The diversity of cyanobacterial metabolism: Genome analysis of multiple phototrophic microorganisms
-
Beck, C.; Knoop, H.; Axmann, I. M.; Steuer, R. The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms BMC Genomics 2012, 13, 56
-
(2012)
BMC Genomics
, vol.13
, pp. 56
-
-
Beck, C.1
Knoop, H.2
Axmann, I.M.3
Steuer, R.4
-
19
-
-
76449115656
-
Integrating multiple 'omics' analysis for microbial biology: Application and methodologies
-
Zhang, W.; Li, F.; Nie, L. Integrating multiple 'omics' analysis for microbial biology: application and methodologies Microbiology 2010, 156, 287-301
-
(2010)
Microbiology
, vol.156
, pp. 287-301
-
-
Zhang, W.1
Li, F.2
Nie, L.3
-
20
-
-
0032976323
-
Ethanol synthesis by genetic engineering in cyanobacteria
-
Deng, M.; Coleman, J. Ethanol synthesis by genetic engineering in cyanobacteria Appl. Environ. Microbiol. 1999, 65, 523-528
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 523-528
-
-
Deng, M.1
Coleman, J.2
-
21
-
-
67449162060
-
Genome-scale modeling of Synechocystis sp. PCC 6803 and prediction of pathway insertion
-
Fu, P. Genome-scale modeling of Synechocystis sp. PCC 6803 and prediction of pathway insertion J. Chem. Technol. Biotechnol. 2009, 84, 473-483
-
(2009)
J. Chem. Technol. Biotechnol.
, vol.84
, pp. 473-483
-
-
Fu, P.1
-
22
-
-
80053172430
-
Engineering microbes for tolerance to next-generation biofuels
-
Dunlop, M. J. Engineering microbes for tolerance to next-generation biofuels Biotechnol. Biofuels 2011, 4, 32
-
(2011)
Biotechnol. Biofuels
, vol.4
, pp. 32
-
-
Dunlop, M.J.1
-
23
-
-
82355185823
-
Mutant selection and phenotypic and genetic characterization of ethanol-tolerant strains of Clostridium thermocellum
-
Shao, X.; Raman, B.; Zhu, M.; Mielenz, J. R.; Brown, S. D.; Guss, A. M.; Lynd, L. R. Mutant selection and phenotypic and genetic characterization of ethanol-tolerant strains of Clostridium thermocellum Appl. Microbiol. Biotechnol. 2011, 92 (3) 641-652
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.92
, Issue.3
, pp. 641-652
-
-
Shao, X.1
Raman, B.2
Zhu, M.3
Mielenz, J.R.4
Brown, S.D.5
Guss, A.M.6
Lynd, L.R.7
-
24
-
-
80052614048
-
Identification of novel genes responsible for ethanol and/or thermotolerance by transposon mutagenesis in Saccharomyces cerevisiae
-
Kim, H. S.; Kim, N. R.; Yang, J.; Choi, W. Identification of novel genes responsible for ethanol and/or thermotolerance by transposon mutagenesis in Saccharomyces cerevisiae Appl. Microbiol. Biotechnol. 2011, 91 (4) 1159-1172
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.91
, Issue.4
, pp. 1159-1172
-
-
Kim, H.S.1
Kim, N.R.2
Yang, J.3
Choi, W.4
-
25
-
-
79955897889
-
High-throughput screening and characterization of xylose-utilizing, ethanol-tolerant thermophilic bacteria for bioethanol production
-
Qi, X.; Zhang, Y.; Tu, R.; Lin, Y.; Li, X.; Wang, Q. High-throughput screening and characterization of xylose-utilizing, ethanol-tolerant thermophilic bacteria for bioethanol production J. Appl. Microbiol. 2011, 110 (6) 1584-1591
-
(2011)
J. Appl. Microbiol.
, vol.110
, Issue.6
, pp. 1584-1591
-
-
Qi, X.1
Zhang, Y.2
Tu, R.3
Lin, Y.4
Li, X.5
Wang, Q.6
-
26
-
-
67949088279
-
Ethanol-tolerant Saccharomyces cerevisiae strains isolated under selective conditions by over-expression of a proofreading-deficient DNA polymerase delta
-
Abe, H; Fujita, Y.; Takaoka, Y.; Kurita, E.; Yano, S.; Tanaka, N.; Nakayama, K. Ethanol-tolerant Saccharomyces cerevisiae strains isolated under selective conditions by over-expression of a proofreading-deficient DNA polymerase delta J. Biosci. Bioeng. 2009, 108 (3) 199-204
-
(2009)
J. Biosci. Bioeng.
, vol.108
, Issue.3
, pp. 199-204
-
-
Abe, H.1
Fujita, Y.2
Takaoka, Y.3
Kurita, E.4
Yano, S.5
Tanaka, N.6
Nakayama, K.7
-
27
-
-
79959248684
-
Construction of Saccharomyces cerevisiae strains with enhanced ethanol tolerance by mutagenesis of the TATA-binding protein gene and identification of novel genes associated with ethanol tolerance
-
Yang, J.; Bae, J. Y.; Lee, Y. M.; Kwon, H.; Moon, H. Y.; Kang, H. A.; Yee, S. B.; Kim, W.; Choi, W. Construction of Saccharomyces cerevisiae strains with enhanced ethanol tolerance by mutagenesis of the TATA-binding protein gene and identification of novel genes associated with ethanol tolerance Biotechnol. Bioeng. 2011, 108 (8) 1776-1787
-
(2011)
Biotechnol. Bioeng.
, vol.108
, Issue.8
, pp. 1776-1787
-
-
Yang, J.1
Bae, J.Y.2
Lee, Y.M.3
Kwon, H.4
Moon, H.Y.5
Kang, H.A.6
Yee, S.B.7
Kim, W.8
Choi, W.9
-
28
-
-
84863278012
-
Creation of an ethanol-tolerant yeast strain by genome reconstruction based on chromosome splitting technology
-
Park, A. H.; Sugiyama, M.; Harashima, S.; Kim, Y. H. Creation of an ethanol-tolerant yeast strain by genome reconstruction based on chromosome splitting technology J. Microbiol. Biotechnol. 2012, 22 (2) 184-189
-
(2012)
J. Microbiol. Biotechnol.
, vol.22
, Issue.2
, pp. 184-189
-
-
Park, A.H.1
Sugiyama, M.2
Harashima, S.3
Kim, Y.H.4
-
29
-
-
77955558633
-
Trends and challenges in the microbial production of lignocellulosic bioalcohol fuels
-
Weber, C.; Farwick, A.; Benisch, F.; Brat, D.; Dietz, H.; Subtil, T.; Boles, E. Trends and challenges in the microbial production of lignocellulosic bioalcohol fuels Appl. Microbiol. Biotechnol. 2010, 87 (4) 1303-1315
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.87
, Issue.4
, pp. 1303-1315
-
-
Weber, C.1
Farwick, A.2
Benisch, F.3
Brat, D.4
Dietz, H.5
Subtil, T.6
Boles, E.7
-
30
-
-
8644282781
-
Sugar beet photosynthe sis under conditions of increasing water deficiency in soil and protective effects of a low-molecular-weight alcohol
-
Kosobriukhov, A. A.; Bil, K. Y.; Nishio, J. N. Sugar beet photosynthe sis under conditions of increasing water deficiency in soil and protective effects of a low-molecular-weight alcohol Prikl. Biokhim. Mikrobiol. 2004, 40, 668-674
-
(2004)
Prikl. Biokhim. Mikrobiol.
, vol.40
, pp. 668-674
-
-
Kosobriukhov, A.A.1
Bil, K.Y.2
Nishio, J.N.3
-
31
-
-
64949130793
-
Identification of the proteomic changes in Synechocystis sp. PCC 6803 following prolonged UV-B irradiation
-
Gao, Y.; Xiong, W.; Li, X. B.; Gao, C. F.; Zhang, Y. L.; Li, H.; Wu, Q. Y. Identification of the proteomic changes in Synechocystis sp. PCC 6803 following prolonged UV-B irradiation J. Exp. Bot. 2009, 60, 1141-1154
-
(2009)
J. Exp. Bot.
, vol.60
, pp. 1141-1154
-
-
Gao, Y.1
Xiong, W.2
Li, X.B.3
Gao, C.F.4
Zhang, Y.L.5
Li, H.6
Wu, Q.Y.7
-
32
-
-
78650098778
-
Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations
-
Wegener, K. M.; Singh, A. K.; Jacobs, J. M.; Elvitigala, T.; Welsh, E. A.; Keren, N.; Gritsenko, M. A.; Ghosh, B. K.; Camp, D. G. 2nd; Smith, R.D.; Pakrasi, H.B. Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations Mol. Cell. Proteomics. 2010, 9, 2678-2689
-
(2010)
Mol. Cell. Proteomics.
, vol.9
, pp. 2678-2689
-
-
Wegener, K.M.1
Singh, A.K.2
Jacobs, J.M.3
Elvitigala, T.4
Welsh, E.A.5
Keren, N.6
Gritsenko, M.A.7
Ghosh, B.K.8
Camp II, D.G.9
Smith, R.D.10
Pakrasi, H.B.11
-
33
-
-
79961214763
-
Proteomics reveals a role for the RNA helicase crhR in the modulation of multiple metabolic pathways during cold acclimation of Synechocystis sp. PCC6803
-
Rowland, J. G.; Simon, W. J.; Prakash, J. S.; Slabas, A. R. Proteomics reveals a role for the RNA helicase crhR in the modulation of multiple metabolic pathways during cold acclimation of Synechocystis sp. PCC6803 J. Proteome Res. 2011, 10, 3674-3689
-
(2011)
J. Proteome Res.
, vol.10
, pp. 3674-3689
-
-
Rowland, J.G.1
Simon, W.J.2
Prakash, J.S.3
Slabas, A.R.4
-
34
-
-
84862923020
-
Proteomic study of the impact of Hik33 mutation in Synechocystis sp. PCC 6803 under normal and salt stress conditions
-
Li, T.; Yang, H. M.; Cui, S. X.; Suzuki, I.; Zhang, L. F.; Li, L.; Bo, T. T.; Wang, J.; Murata, N.; Huang, F. Proteomic study of the impact of Hik33 mutation in Synechocystis sp. PCC 6803 under normal and salt stress conditions J. Proteome Res. 2012, 11, 502-514
-
(2012)
J. Proteome Res.
, vol.11
, pp. 502-514
-
-
Li, T.1
Yang, H.M.2
Cui, S.X.3
Suzuki, I.4
Zhang, L.F.5
Li, L.6
Bo, T.T.7
Wang, J.8
Murata, N.9
Huang, F.10
-
35
-
-
67650685558
-
An integrated network approach identifies the isobutanol response network of Escherichia coli
-
Brynildsen, M. P.; Liao, J. C. An integrated network approach identifies the isobutanol response network of Escherichia coli Mol. Syst. Biol. 2009, 5, 277
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 277
-
-
Brynildsen, M.P.1
Liao, J.C.2
-
36
-
-
77749245785
-
Functional genomic study of exogenous n-butanol stress in Escherichia coli
-
Rutherford, B. J.; Dahl, R. H.; Price, R. E.; Szmidt, H. L.; Benke, P. I.; Mukhopadhyay, A.; Keasling, J. D. Functional genomic study of exogenous n-butanol stress in Escherichia coli Appl. Environ. Microbiol. 2010, 76, 1935-1945
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 1935-1945
-
-
Rutherford, B.J.1
Dahl, R.H.2
Price, R.E.3
Szmidt, H.L.4
Benke, P.I.5
Mukhopadhyay, A.6
Keasling, J.D.7
-
37
-
-
77953237121
-
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli
-
Goodarzi, H.; Bennett, B. D.; Amini, S.; Reaves, M. L.; Hottes, A. K.; Rabinowitz, J. D.; Tavazoie, S. Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli Mol. Syst. Biol. 2010, 6, 378
-
(2010)
Mol. Syst. Biol.
, vol.6
, pp. 378
-
-
Goodarzi, H.1
Bennett, B.D.2
Amini, S.3
Reaves, M.L.4
Hottes, A.K.5
Rabinowitz, J.D.6
Tavazoie, S.7
-
38
-
-
0345600953
-
Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803
-
Kaneko, T.; Nakamura, Y.; Sasamoto, S.; Watanabe, A.; Kohara, M.; Matsumoto, M.; Shimpo, S.; Yamada, M.; Tabata, S. Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803 DNA Res. 2003, 10, 221-228
-
(2003)
DNA Res.
, vol.10
, pp. 221-228
-
-
Kaneko, T.1
Nakamura, Y.2
Sasamoto, S.3
Watanabe, A.4
Kohara, M.5
Matsumoto, M.6
Shimpo, S.7
Yamada, M.8
Tabata, S.9
-
39
-
-
33847340190
-
Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)
-
Gan, C. S.; Chong, P. K.; Pham, T. K.; Wright, P. C. Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ) J. Proteome Res. 2007, 6, 821-827
-
(2007)
J. Proteome Res.
, vol.6
, pp. 821-827
-
-
Gan, C.S.1
Chong, P.K.2
Pham, T.K.3
Wright, P.C.4
-
40
-
-
0015076683
-
Purification and properties of unicellular blue-green algae (order Chroococcales)
-
Stanier, R. Y.; Kunisawa, R.; Mandel, M.; Cohen-Bazire, G. Purification and properties of unicellular blue-green algae (order Chroococcales) Bacteriol. Rev. 1971, 35, 171-205
-
(1971)
Bacteriol. Rev.
, vol.35
, pp. 171-205
-
-
Stanier, R.Y.1
Kunisawa, R.2
Mandel, M.3
Cohen-Bazire, G.4
-
41
-
-
0029831325
-
Absence of light-induced proton extrusion in a cotA-less mutant of Synechocystis sp. strain PCC6803
-
Katoh, A.; Sonoda, M.; Katoh, H.; Ogawa, T. Absence of light-induced proton extrusion in a cotA-less mutant of Synechocystis sp. strain PCC6803 J. Bacteriol. 1996, 178, 5452-5455
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5452-5455
-
-
Katoh, A.1
Sonoda, M.2
Katoh, H.3
Ogawa, T.4
-
42
-
-
33847340190
-
Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)
-
Gan, C. S.; Chong, P. K.; Pham, T. K.; Wright, P. C. Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ) J. Proteome Res. 2007, 6, 821-827
-
(2007)
J. Proteome Res.
, vol.6
, pp. 821-827
-
-
Gan, C.S.1
Chong, P.K.2
Pham, T.K.3
Wright, P.C.4
-
43
-
-
79952279293
-
Simultaneous analysis of relative protein expression levels across multiple samples using iTRAQ isobaric tags with 2D nano LC-MS/MS
-
Unwin, R. D.; Griffiths, J. R.; Whetton, A. D. Simultaneous analysis of relative protein expression levels across multiple samples using iTRAQ isobaric tags with 2D nano LC-MS/MS Nat. Protoc. 2010, 5, 1574-1582
-
(2010)
Nat. Protoc.
, vol.5
, pp. 1574-1582
-
-
Unwin, R.D.1
Griffiths, J.R.2
Whetton, A.D.3
-
44
-
-
37449026606
-
O-linked glycosylation ensures the normal conformation of the autotransporter adhesin involved in diffuse adherence
-
Charbonneau, M. E.; Girard, V.; Nikolakakis, A.; Campos, M.; Berthiaume, F.; Dumas, F.; Lépine, F.; Mourez, M. O-linked glycosylation ensures the normal conformation of the autotransporter adhesin involved in diffuse adherence J. Bacteriol. 2007, 189, 8880-8889
-
(2007)
J. Bacteriol.
, vol.189
, pp. 8880-8889
-
-
Charbonneau, M.E.1
Girard, V.2
Nikolakakis, A.3
Campos, M.4
Berthiaume, F.5
Dumas, F.6
Lépine, F.7
Mourez, M.8
-
45
-
-
23144467676
-
BASys: A web server for automated bacterial genome annotation
-
Van Domselaar, G. H.; Stothard, P.; Shrivastava, S.; Cruz, J. A.; Guo, A.; Dong, X.; Lu, P.; Szafron, D.; Greiner, R.; Wishart, D. S. BASys: a web server for automated bacterial genome annotation Nucleic Acids Res. 2005, 33, W455-W459
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Van Domselaar, G.H.1
Stothard, P.2
Shrivastava, S.3
Cruz, J.A.4
Guo, A.5
Dong, X.6
Lu, P.7
Szafron, D.8
Greiner, R.9
Wishart, D.S.10
-
46
-
-
67749122097
-
Characterization of the Synechocystis strain PCC 6803 penicillin-binding proteins and cytokinetic proteins FtsQ and FtsW and their network of interactions with ZipN
-
Marbouty, M.; Mazouni, K.; Saguez, C. Characterization of the Synechocystis strain PCC 6803 penicillin-binding proteins and cytokinetic proteins FtsQ and FtsW and their network of interactions with ZipN J. Bacteriol. 2009, 191 (16) 5123-5133
-
(2009)
J. Bacteriol.
, vol.191
, Issue.16
, pp. 5123-5133
-
-
Marbouty, M.1
Mazouni, K.2
Saguez, C.3
-
47
-
-
0000411157
-
Absorption of light by chlorophyll solutions
-
Mackinney, G. Absorption of light by chlorophyll solutions J. Biol. Chem. 1941, 140, 315-322
-
(1941)
J. Biol. Chem.
, vol.140
, pp. 315-322
-
-
MacKinney, G.1
-
48
-
-
57649149334
-
Genome shuffling to improve thermo- tolerance, ethanol tolerance and ethanol productivity of Saccharomyces cerevisiae
-
Shi, D. J.; Wang, C. L.; Wang, K. M. Genome shuffling to improve thermo- tolerance, ethanol tolerance and ethanol productivity of Saccharomyces cerevisiae J. Ind. Microbiol. Biotechnol. 2009, 36 (1) 139-147
-
(2009)
J. Ind. Microbiol. Biotechnol.
, vol.36
, Issue.1
, pp. 139-147
-
-
Shi, D.J.1
Wang, C.L.2
Wang, K.M.3
-
49
-
-
20544457864
-
Metabolic engineering in the -omics era: Elucidating and modulating regulatory networks
-
Vemuri, G. N.; Aristidou, A. A. Metabolic engineering in the -omics era: elucidating and modulating regulatory networks Microbiol. Mol. Biol. Rev. 2005, 69, 197-216
-
(2005)
Microbiol. Mol. Biol. Rev.
, vol.69
, pp. 197-216
-
-
Vemuri, G.N.1
Aristidou, A.A.2
-
50
-
-
77953578881
-
The ethanol stress response and ethanol tolerance of Saccharomyces cerevisiae
-
Stanley, D.; Bandara, A.; Fraser, S.; Chambers, P. J.; Stanley, G. A. The ethanol stress response and ethanol tolerance of Saccharomyces cerevisiae J. Appl. Microbiol. 2010, 109 (1) 13-24
-
(2010)
J. Appl. Microbiol.
, vol.109
, Issue.1
, pp. 13-24
-
-
Stanley, D.1
Bandara, A.2
Fraser, S.3
Chambers, P.J.4
Stanley, G.A.5
-
51
-
-
78751658356
-
Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis
-
Widiastuti, H.; Kim, J. Y.; Selvarasu, S.; Karimi, I. A.; Kim, H.; Seo, J. S.; Lee, D. Y. Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis Biotechnol. Bioeng. 2011, 108 (3) 655-665
-
(2011)
Biotechnol. Bioeng.
, vol.108
, Issue.3
, pp. 655-665
-
-
Widiastuti, H.1
Kim, J.Y.2
Selvarasu, S.3
Karimi, I.A.4
Kim, H.5
Seo, J.S.6
Lee, D.Y.7
-
52
-
-
77953738245
-
Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae
-
Yang, S.; Land, M. L.; Klingeman, D. M.; Pelletier, D. A.; Lu, T. Y.; Martin, S. L.; Guo, H. B.; Smith, J. C.; Brown., S. D. Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae Proc. Natl. Acad. Sci. U.S.A. 2010, 107 (23) 10395-10400
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, Issue.23
, pp. 10395-10400
-
-
Yang, S.1
Land, M.L.2
Klingeman, D.M.3
Pelletier, D.A.4
Lu, T.Y.5
Martin, S.L.6
Guo, H.B.7
Smith, J.C.8
Brown, S.D.9
-
53
-
-
12244260736
-
Microarray analyses of the metabolic responses of Saccharomyces cerevisiae to organic solvent dimethyl sulfoxide
-
Zhang, W.; Needham, D. L.; Coffin, M.; Rooker, A.; Hurban, P.; Tanzer, M. M.; Shuster, J. R. Microarray analyses of the metabolic responses of Saccharomyces cerevisiae to organic solvent dimethyl sulfoxide J. Ind. Microbiol. Biotechnol. 2003, 30 (1) 57-69
-
(2003)
J. Ind. Microbiol. Biotechnol.
, vol.30
, Issue.1
, pp. 57-69
-
-
Zhang, W.1
Needham, D.L.2
Coffin, M.3
Rooker, A.4
Hurban, P.5
Tanzer, M.M.6
Shuster, J.R.7
-
54
-
-
0033637153
-
Genomic expression programs in the response of yeast cells to environmental changes
-
Gasch, A. P.; Spellman, P. T.; Kao, C. M.; Carmel-Harel, O.; Eisen, M. B.; Storz, G.; Botstein, D.; Brown, P. O. Genomic expression programs in the response of yeast cells to environmental changes Mol. Biol. Cell 2000, 11 (12) 4241-4257
-
(2000)
Mol. Biol. Cell
, vol.11
, Issue.12
, pp. 4241-4257
-
-
Gasch, A.P.1
Spellman, P.T.2
Kao, C.M.3
Carmel-Harel, O.4
Eisen, M.B.5
Storz, G.6
Botstein, D.7
Brown, P.O.8
-
55
-
-
71249083129
-
Tolerance and stress response to ethanol in the yeast Saccharomyces cerevisiae
-
Ding, J.; Huang, X.; Zhang, L.; Zhao, N.; Yang, D.; Zhang, K. Tolerance and stress response to ethanol in the yeast Saccharomyces cerevisiae Appl. Microbiol. Biotechnol. 2009, 85 (2) 253-263
-
(2009)
Appl. Microbiol. Biotechnol.
, vol.85
, Issue.2
, pp. 253-263
-
-
Ding, J.1
Huang, X.2
Zhang, L.3
Zhao, N.4
Yang, D.5
Zhang, K.6
-
56
-
-
0035370872
-
Global gene expression during short-term ethanol stress in Saccharomyces cerevisia e
-
Alexandre, H.; Ansanay-Galeote, V.; Dequin, S.; Blondin, B. Global gene expression during short-term ethanol stress in Saccharomyces cerevisia e FEBS Lett. 2001, 498, 98-103
-
(2001)
FEBS Lett.
, vol.498
, pp. 98-103
-
-
Alexandre, H.1
Ansanay-Galeote, V.2
Dequin, S.3
Blondin, B.4
-
57
-
-
0026523626
-
Hsp104 is required for tolerance to many forms of stress
-
Sanchez, Y.; Taulien, J.; Borkovich, K. A.; Lindquist, S. Hsp104 is required for tolerance to many forms of stress EMBO J. 1992, 11, 2357-2364
-
(1992)
EMBO J.
, vol.11
, pp. 2357-2364
-
-
Sanchez, Y.1
Taulien, J.2
Borkovich, K.A.3
Lindquist, S.4
-
58
-
-
0028032614
-
Cloning, sequencing and expression of stress genes from the ethanol-producing bacterium Zymomonas mobilis: The groESL operon
-
Barbosa, M. F.; Yomano, L. P.; Ingram, L. O. Cloning, sequencing and expression of stress genes from the ethanol-producing bacterium Zymomonas mobilis: the groESL operon Gene 1994, 148 (1) 51-57
-
(1994)
Gene
, vol.148
, Issue.1
, pp. 51-57
-
-
Barbosa, M.F.1
Yomano, L.P.2
Ingram, L.O.3
-
59
-
-
33846461303
-
Cloning and transcriptional analysis of groES and groEL in ethanol-producing bacterium Zymomonas mobilis TISTR 548
-
Thanonkeo, P.; Sootsuwan, K.; Leelavacharamas, V.; Yamada, M. Cloning and transcriptional analysis of groES and groEL in ethanol-producing bacterium Zymomonas mobilis TISTR 548 Pak. J. Biol. Sci. 2007, 10 (1) 13-22
-
(2007)
Pak. J. Biol. Sci.
, vol.10
, Issue.1
, pp. 13-22
-
-
Thanonkeo, P.1
Sootsuwan, K.2
Leelavacharamas, V.3
Yamada, M.4
-
60
-
-
84865403230
-
A transcriptional study of acidogenic chemostat cells of Clostridium acetobutylicum - Cellular behavior in adaptation to n -butanol
-
Mar 29 [Epub ahead of print]
-
Schwarz, K. M.; Kuit, W.; Grimmler, C.; Ehrenreich, A.; Kengen, S. W. A transcriptional study of acidogenic chemostat cells of Clostridium acetobutylicum-Cellular behavior in adaptation to n -butanol. J. Biotechnol. 2012, Mar 29 [Epub ahead of print]
-
(2012)
J. Biotechnol.
-
-
Schwarz, K.M.1
Kuit, W.2
Grimmler, C.3
Ehrenreich, A.4
Kengen, S.W.5
-
61
-
-
34250792218
-
N-Acetyltransferase Mpr1 confers ethanol tolerance on Saccharomyces cerevisiae by reducing reactive oxygen species
-
Du, X.; Takagi, H. N-Acetyltransferase Mpr1 confers ethanol tolerance on Saccharomyces cerevisiae by reducing reactive oxygen species Appl. Microbiol. Biotechnol. 2007, 75, 1343-1351
-
(2007)
Appl. Microbiol. Biotechnol.
, vol.75
, pp. 1343-1351
-
-
Du, X.1
Takagi, H.2
-
62
-
-
77955427058
-
The Escherichia coli btuE gene, encodes a glutathione peroxidase that is induced under oxidative stress conditions
-
Arenas, F. A.; Díaz, W. A.; Leal, C. A.; Pérez-Donoso, J. M.; Imlay, J. A.; Vásquez, C. C. The Escherichia coli btuE gene, encodes a glutathione peroxidase that is induced under oxidative stress conditions Biochem. Biophys. Res. Commun. 2010, 398 (4) 690-694
-
(2010)
Biochem. Biophys. Res. Commun.
, vol.398
, Issue.4
, pp. 690-694
-
-
Arenas, F.A.1
Díaz, W.A.2
Leal, C.A.3
Pérez-Donoso, J.M.4
Imlay, J.A.5
Vásquez, C.C.6
-
63
-
-
84855306128
-
Role of bacterioferritin comigratory protein and glutathione peroxidase-reductase system in promoting bentazone tolerance in a mutant of Synechococcus elongatus PCC7942
-
Das, P. K.; Bagchi, S. N. Role of bacterioferritin comigratory protein and glutathione peroxidase-reductase system in promoting bentazone tolerance in a mutant of Synechococcus elongatus PCC7942 Protoplasma 2012, 249 (1) 65-74
-
(2012)
Protoplasma
, vol.249
, Issue.1
, pp. 65-74
-
-
Das, P.K.1
Bagchi, S.N.2
-
64
-
-
78650320095
-
Glutaredoxins Grx4 and Grx3 of Saccharomyces cerevisiae play a role in actin dynamics through their Trx domains, which contributes to oxidative stress resistance
-
Pujol-Carrion, N.; de la Torre-Ruiz, M. A. Glutaredoxins Grx4 and Grx3 of Saccharomyces cerevisiae play a role in actin dynamics through their Trx domains, which contributes to oxidative stress resistance Appl. Environ. Microbiol. 2010, 76 (23) 7826-7835
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, Issue.23
, pp. 7826-7835
-
-
Pujol-Carrion, N.1
De La Torre-Ruiz, M.A.2
-
65
-
-
28344444976
-
Stress-dependent regulation of a monothiol glutaredoxin gene from Schizosaccharomyces pombe
-
Kim, H. G.; Kim, B. C.; Park, E. H.; Lim, C. J. Stress-dependent regulation of a monothiol glutaredoxin gene from Schizosaccharomyces pombe Can. J. Microbiol. 2005, 51 (7) 613-620
-
(2005)
Can. J. Microbiol.
, vol.51
, Issue.7
, pp. 613-620
-
-
Kim, H.G.1
Kim, B.C.2
Park, E.H.3
Lim, C.J.4
-
66
-
-
33745960576
-
Oxidative stress and heat-shock responses in Desulfovibrio vulgaris by genome-wide transcriptomic analysis
-
Zhang, W.; Culley, D. E.; Hogan, M.; Vitiritti, L.; Brockman, F. J. Oxidative stress and heat-shock responses in Desulfovibrio vulgaris by genome-wide transcriptomic analysis Antonie van Leeuwenhoek 2006, 90 (1) 41-55
-
(2006)
Antonie Van Leeuwenhoek
, vol.90
, Issue.1
, pp. 41-55
-
-
Zhang, W.1
Culley, D.E.2
Hogan, M.3
Vitiritti, L.4
Brockman, F.J.5
-
67
-
-
0030955353
-
The yeast peptide-methionine sulfoxide reductase functions as an antioxidant in vivo
-
Moskovitz, J.; Berlett, B. S.; Poston, J. M.; Stadtman, E. R. The yeast peptide-methionine sulfoxide reductase functions as an antioxidant in vivo Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 9585-9589
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 9585-9589
-
-
Moskovitz, J.1
Berlett, B.S.2
Poston, J.M.3
Stadtman, E.R.4
-
68
-
-
0032564345
-
Over-expression of peptide-methionine sulfoxide reductase in Saccharomyces cerevisiae and human T cells provides them with high resistance to oxidative stress
-
Moskovitz, J.; Flescher, E.; Berlett, B. S.; Azare, J.; Poston, J. M.; Stadtman, E. R. Over-expression of peptide-methionine sulfoxide reductase in Saccharomyces cerevisiae and human T cells provides them with high resistance to oxidative stress Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 14071-14075
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, pp. 14071-14075
-
-
Moskovitz, J.1
Flescher, E.2
Berlett, B.S.3
Azare, J.4
Poston, J.M.5
Stadtman, E.R.6
-
69
-
-
79959604550
-
The Saccharomyces cerevisiae flavodoxin-like proteins Ycp4 and Rfs1 play a role in stress response and in the regulation of genes related to metabolism
-
Cardona, F.; Orozco, H.; Friant, S.; Aranda, A.; del Olmo, M. The Saccharomyces cerevisiae flavodoxin-like proteins Ycp4 and Rfs1 play a role in stress response and in the regulation of genes related to metabolism Arch. Microbiol. 2011, 193 (7) 515-525
-
(2011)
Arch. Microbiol.
, vol.193
, Issue.7
, pp. 515-525
-
-
Cardona, F.1
Orozco, H.2
Friant, S.3
Aranda, A.4
Del Olmo, M.5
-
70
-
-
36148988019
-
RbrA, a cyanobacterial rubrerythrin, functions as a FNR-dependent peroxidase in heterocysts in protection of nitrogenase from damage by hydrogen peroxide in Anabaena sp. PCC 7120
-
Zhao, W.; Ye, Z.; Zhao, J. RbrA, a cyanobacterial rubrerythrin, functions as a FNR-dependent peroxidase in heterocysts in protection of nitrogenase from damage by hydrogen peroxide in Anabaena sp. PCC 7120 Mol. Microbiol. 2007, 66 (5) 1219-1230
-
(2007)
Mol. Microbiol.
, vol.66
, Issue.5
, pp. 1219-1230
-
-
Zhao, W.1
Ye, Z.2
Zhao, J.3
-
71
-
-
79953684285
-
A comparative analysis of the NADPH thioredoxin reductase C-2-Cys peroxiredoxin system from plants and cyanobacteria
-
Pascual, M. B.; Mata-Cabana, A.; Florencio, F. J.; Lindahl, M.; Cejudo, F. J. A comparative analysis of the NADPH thioredoxin reductase C-2-Cys peroxiredoxin system from plants and cyanobacteria Plant Physiol. 2011, 155 (4) 1806-1816
-
(2011)
Plant Physiol.
, vol.155
, Issue.4
, pp. 1806-1816
-
-
Pascual, M.B.1
Mata-Cabana, A.2
Florencio, F.J.3
Lindahl, M.4
Cejudo, F.J.5
-
72
-
-
77953578881
-
The ethanol stress response and ethanol tolerance of Saccharomyces cerevisiae
-
Stanley, D.; Bandara, A.; Fraser, S.; Chambers, P. J.; Stanley, G. A. The ethanol stress response and ethanol tolerance of Saccharomyces cerevisiae J. Appl. Microbiol. 2010, 109 (1) 13-24
-
(2010)
J. Appl. Microbiol.
, vol.109
, Issue.1
, pp. 13-24
-
-
Stanley, D.1
Bandara, A.2
Fraser, S.3
Chambers, P.J.4
Stanley, G.A.5
-
73
-
-
70149116132
-
Genome-wide identification of Saccharomyces cerevisiae genes required for maximal tolerance to ethanol
-
Teixeira, M. C.; Raposo, L. R.; Mira, N. P.; Lourenço, A. B.; Sá-Correia, I. Genome-wide identification of Saccharomyces cerevisiae genes required for maximal tolerance to ethanol Appl. Environ. Microbiol. 2009, 75 (18) 5761-5772
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, Issue.18
, pp. 5761-5772
-
-
Teixeira, M.C.1
Raposo, L.R.2
Mira, N.P.3
Lourenço, A.B.4
Sá-Correia, I.5
-
75
-
-
0023976512
-
Phosphate transport and arsenate resistance in the cyanobacterium Anabaena variabilis
-
Thiel, T. Phosphate transport and arsenate resistance in the cyanobacterium Anabaena variabilis J. Bacteriol. 1988, 70, 1143-1147
-
(1988)
J. Bacteriol.
, vol.70
, pp. 1143-1147
-
-
Thiel, T.1
-
76
-
-
0026298727
-
2+ resistance in the cyanobacterium Nostoc calcicola
-
2+ resistance in the cyanobacterium Nostoc calcicola FEMS Microbiol. Lett. 1991, 68, 291-294
-
(1991)
FEMS Microbiol. Lett.
, vol.68
, pp. 291-294
-
-
Verma, S.K.1
Singh, H.N.2
-
77
-
-
0029169261
-
Synechococcu s sp. PCC7942 transformed with Escherichia coli bet genes produces glycine betaine from choline and acquires resistance to salt stress
-
Nomura, M.; Ishitani, M.; Takabe, T.; Rai, A. K.; Takabe, T. Synechococcu s sp. PCC7942 transformed with Escherichia coli bet genes produces glycine betaine from choline and acquires resistance to salt stress Plant Physiol. 1995, 107, 703-708
-
(1995)
Plant Physiol.
, vol.107
, pp. 703-708
-
-
Nomura, M.1
Ishitani, M.2
Takabe, T.3
Rai, A.K.4
Takabe, T.5
-
78
-
-
0030004217
-
Active transport of glucosylglycerol is involved in salt adaptation of the cyanobacterium Synechocystis sp. strain PCC 6803
-
Mikkat, S.; Hagemann, M.; Schoor, A. Active transport of glucosylglycerol is involved in salt adaptation of the cyanobacterium Synechocystis sp. strain PCC 6803 Microbiology 1996, 142, 1725-1732
-
(1996)
Microbiology
, vol.142
, pp. 1725-1732
-
-
Mikkat, S.1
Hagemann, M.2
Schoor, A.3
-
79
-
-
0036724147
-
A novel histidine-rich CPx-ATPase from the filamentous cyanobacterium Oscillatoria brevis related to multiple-heavy-metal cotolerance
-
Tong, L.; Nakashima, S.; Shibasaka, M.; Katsuhara, M.; Kasamo, K. A novel histidine-rich CPx-ATPase from the filamentous cyanobacterium Oscillatoria brevis related to multiple-heavy-metal cotolerance J. Bacteriol. 2002, 184, 5027-5035
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5027-5035
-
-
Tong, L.1
Nakashima, S.2
Shibasaka, M.3
Katsuhara, M.4
Kasamo, K.5
-
82
-
-
0036772158
-
Localization and function of the IdiA homologue Slr1295 in the cyanobacterium Synechocystis sp. strain PCC 6803
-
Tölle, J.; Michel, K. P.; Kruip, J.; Kahmann, U.; Preisfeld, A.; Pistorius, E. K. Localization and function of the IdiA homologue Slr1295 in the cyanobacterium Synechocystis sp. strain PCC 6803 Microbiology. 2002, 148 (10) 3293-3305
-
(2002)
Microbiology.
, vol.148
, Issue.10
, pp. 3293-3305
-
-
Tölle, J.1
Michel, K.P.2
Kruip, J.3
Kahmann, U.4
Preisfeld, A.5
Pistorius, E.K.6
-
83
-
-
0026077523
-
Content and composition of hopanoids in Zymomonas mobilis under various growth conditions
-
Hermans, M. A.; Neuss, B.; Sahm, H. Content and composition of hopanoids in Zymomonas mobilis under various growth conditions J. Bacteriol. 1991, 173, 5592-5595
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5592-5595
-
-
Hermans, M.A.1
Neuss, B.2
Sahm, H.3
-
85
-
-
70349088644
-
Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1
-
Welander, P. V.; Hunter, R. C.; Zhang, L. C.; Sessions, A. L.; Summons, R. E.; Newman, D. K. Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1 J. Bacteriol. 2009, 191, 6145-6156
-
(2009)
J. Bacteriol.
, vol.191
, pp. 6145-6156
-
-
Welander, P.V.1
Hunter, R.C.2
Zhang, L.C.3
Sessions, A.L.4
Summons, R.E.5
Newman, D.K.6
-
86
-
-
79951654365
-
High isoelectric point sub-proteome analysis of Acinetobacter radioresistens S13 reveals envelope stress responses induced by aromatic compounds
-
Mazzoli, R.; Fattori, P.; Lamberti, C.; Giuffrida, M. G.; Zapponi, M.; Giunta, C.; Pessione, E. High isoelectric point sub-proteome analysis of Acinetobacter radioresistens S13 reveals envelope stress responses induced by aromatic compounds Mol. Biosyst. 2011, 7, 598-607
-
(2011)
Mol. Biosyst.
, vol.7
, pp. 598-607
-
-
Mazzoli, R.1
Fattori, P.2
Lamberti, C.3
Giuffrida, M.G.4
Zapponi, M.5
Giunta, C.6
Pessione, E.7
-
87
-
-
0032545321
-
Structure of the MscL homolog from Mycobacterium tuberculosi s: A gated mechanosensitive ion channel
-
Chang, G.; Spencer, R. H.; Lee, A. T.; Barclay, M. T.; Rees, D. C. Structure of the MscL homolog from Mycobacterium tuberculosi s: a gated mechanosensitive ion channel Science 1998, 282 (5397) 2220-2226
-
(1998)
Science
, vol.282
, Issue.5397
, pp. 2220-2226
-
-
Chang, G.1
Spencer, R.H.2
Lee, A.T.3
Barclay, M.T.4
Rees, D.C.5
-
88
-
-
77953022341
-
A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: From biofuels and chemicals, to biocatalysis and bioremediation
-
Nicolaou, S. A.; Gaida, S. M.; Papoutsakis, E. T. A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: From biofuels and chemicals, to biocatalysis and bioremediation Metab. Eng. 2010, 12 (4) 307-331
-
(2010)
Metab. Eng.
, vol.12
, Issue.4
, pp. 307-331
-
-
Nicolaou, S.A.1
Gaida, S.M.2
Papoutsakis, E.T.3
-
89
-
-
1642324901
-
Transcriptional analysis of spo0A overexpression in Clostridium acetobutylicum and its effect on the cell's response to butanol stress
-
Alsaker, K. V.; Spitzer, T. R.; Papoutsakis, E. T. Transcriptional analysis of spo0A overexpression in Clostridium acetobutylicum and its effect on the cell's response to butanol stress J. Bacteriol. 2004, 186 (7) 1959-1971
-
(2004)
J. Bacteriol.
, vol.186
, Issue.7
, pp. 1959-1971
-
-
Alsaker, K.V.1
Spitzer, T.R.2
Papoutsakis, E.T.3
-
90
-
-
0041527249
-
Overexpression of groESL in Clostridium acetobutylicum results in increased solvent production and tolerance, prolonged metabolism, and changes in the cell's transcriptional program
-
Tomas, C. A.; Welker, N. E.; Papoutsakis, E. T. Overexpression of groESL in Clostridium acetobutylicum results in increased solvent production and tolerance, prolonged metabolism, and changes in the cell's transcriptional program Appl. Environ. Microbiol. 2003, 69 (8) 4951-4965
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, Issue.8
, pp. 4951-4965
-
-
Tomas, C.A.1
Welker, N.E.2
Papoutsakis, E.T.3
-
91
-
-
32944467003
-
Proteomic screening of salt-stress-induced changes in plasma membranes of Synechocystis sp. strain PCC 6803
-
Huang, F.; Fulda, S.; Hagemann, M.; Norling, B. Proteomic screening of salt-stress-induced changes in plasma membranes of Synechocystis sp. strain PCC 6803 Proteomics 2006, 6 (3) 910-920
-
(2006)
Proteomics
, vol.6
, Issue.3
, pp. 910-920
-
-
Huang, F.1
Fulda, S.2
Hagemann, M.3
Norling, B.4
-
92
-
-
20444367654
-
Identical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of individual genes to different extents in Synechocystis
-
Shoumskaya, M. A.; Paithoonrangsarid, K.; Kanesaki, Y.; Los, D. A.; Zinchenko, V. V.; Tanticharoen, M.; Suzuki, I.; Murata, N. Identical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of individual genes to different extents in Synechocystis J. Biol. Chem. 2005, 280, 21531-21538
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 21531-21538
-
-
Shoumskaya, M.A.1
Paithoonrangsarid, K.2
Kanesaki, Y.3
Los, D.A.4
Zinchenko, V.V.5
Tanticharoen, M.6
Suzuki, I.7
Murata, N.8
-
93
-
-
67649388222
-
Characterization of an alcohol dehydrogenase from the Cyanobacterium Synechocystis sp. strain PCC 6803 that responds to environmental stress conditions via the Hik34-Rre1 two-component system
-
Vidal, R.; López-Maury, L.; Guerrero, M. G.; Florencio, F. J. Characterization of an alcohol dehydrogenase from the Cyanobacterium Synechocystis sp. strain PCC 6803 that responds to environmental stress conditions via the Hik34-Rre1 two-component system J. Bacteriol. 2009, 191, 4383-4391
-
(2009)
J. Bacteriol.
, vol.191
, pp. 4383-4391
-
-
Vidal, R.1
López-Maury, L.2
Guerrero, M.G.3
Florencio, F.J.4
-
94
-
-
0034087676
-
Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system
-
Orth, P.; Schnappinger, D.; Hillen, W.; Saenger, W.; Hinrichs, W. Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system Nat. Struct. Biol. 2000, 7 (3) 215-219
-
(2000)
Nat. Struct. Biol.
, vol.7
, Issue.3
, pp. 215-219
-
-
Orth, P.1
Schnappinger, D.2
Hillen, W.3
Saenger, W.4
Hinrichs, W.5
-
95
-
-
0035824388
-
Structural mechanisms of QacR induction and multidrug recognition
-
Schumacher, M. A.; Miller, M. C.; Grkovic, S.; Brown, M. H.; Skurray, R. A.; Brennan, R. G. Structural mechanisms of QacR induction and multidrug recognition Science 2001, 294 (5549) 2158-2163
-
(2001)
Science
, vol.294
, Issue.5549
, pp. 2158-2163
-
-
Schumacher, M.A.1
Miller, M.C.2
Grkovic, S.3
Brown, M.H.4
Skurray, R.A.5
Brennan, R.G.6
-
96
-
-
22144475428
-
Distribution and evolution of multiple-step phosphorelay in prokaryotes: Lateral domain recruitment involved in the formation of hybrid-type histidine kinases
-
Zhang, W.; Shi, L. Distribution and evolution of multiple-step phosphorelay in prokaryotes: lateral domain recruitment involved in the formation of hybrid-type histidine kinases Microbiology 2005, 151 (7) 2159-2173
-
(2005)
Microbiology
, vol.151
, Issue.7
, pp. 2159-2173
-
-
Zhang, W.1
Shi, L.2
-
97
-
-
0035153837
-
Characterization and analysis of an NAD(P)H dehydrogenase transcriptional regulator critical for the survival of cyanobacteria facing inorganic carbon starvation and osmotic stress
-
Figge, R. M.; Cassier-Chauvat, C.; Chauvat, F.; Cerff, R. Characterization and analysis of an NAD(P)H dehydrogenase transcriptional regulator critical for the survival of cyanobacteria facing inorganic carbon starvation and osmotic stress Mol. Microbiol. 2001, 39 (2) 455-468
-
(2001)
Mol. Microbiol.
, vol.39
, Issue.2
, pp. 455-468
-
-
Figge, R.M.1
Cassier-Chauvat, C.2
Chauvat, F.3
Cerff, R.4
-
98
-
-
67650465604
-
The ObgE/CgtA GTPase influences the stringent response to amino acid starvation in Escherichia coli
-
Persky, N. S.; Ferullo, D. J.; Cooper, D. L.; Moore, H. R.; Lovett, S. T. The ObgE/CgtA GTPase influences the stringent response to amino acid starvation in Escherichia coli Mol. Microbiol. 2009, 73 (2) 253-266
-
(2009)
Mol. Microbiol.
, vol.73
, Issue.2
, pp. 253-266
-
-
Persky, N.S.1
Ferullo, D.J.2
Cooper, D.L.3
Moore, H.R.4
Lovett, S.T.5
-
99
-
-
71049134394
-
The (p)ppGpp synthetase RelA contributes to stress adaptation and virulence in Enterococcus faecalis V583
-
Yan, X.; Zhao, C.; Budin-Verneuil, A.; Hartke, A.; Rincé, A.; Gilmore, M. S.; Auffray, Y.; Pichereau, V. The (p)ppGpp synthetase RelA contributes to stress adaptation and virulence in Enterococcus faecalis V583 Microbiology. 2009, 155 (10) 3226-3237
-
(2009)
Microbiology.
, vol.155
, Issue.10
, pp. 3226-3237
-
-
Yan, X.1
Zhao, C.2
Budin-Verneuil, A.3
Hartke, A.4
Rincé, A.5
Gilmore, M.S.6
Auffray, Y.7
Pichereau, V.8
-
100
-
-
0342546319
-
Cyanobacterial Acclimation to Photosystem i or Photosystem II Light
-
Manodori, A.; Melis, A. Cyanobacterial Acclimation to Photosystem I or Photosystem II Light Plant Physiol. 1986, 82 (1) 185-189
-
(1986)
Plant Physiol.
, vol.82
, Issue.1
, pp. 185-189
-
-
Manodori, A.1
Melis, A.2
-
101
-
-
57849155713
-
Salt stress inhibits photosystems II and i in cyanobacteria
-
Allakhverdiev, S. I.; Murata, N. Salt stress inhibits photosystems II and I in cyanobacteria Photosynth. Res. 2008, 98, 529-539
-
(2008)
Photosynth. Res.
, vol.98
, pp. 529-539
-
-
Allakhverdiev, S.I.1
Murata, N.2
-
102
-
-
48549092471
-
Gene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803
-
Zhang, Z.; Pendse, N. D.; Phillips, K. N.; Cotner, J. B.; Khodursky, A. Gene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803 BMC Genomics 2008, 9, 344
-
(2008)
BMC Genomics
, vol.9
, pp. 344
-
-
Zhang, Z.1
Pendse, N.D.2
Phillips, K.N.3
Cotner, J.B.4
Khodursky, A.5
-
103
-
-
57849155713
-
Salt stress inhibits photosystems II and i in cyanobacteria
-
Allakhverdiev, S. I.; Murata, N. Salt stress inhibits photosystems II and I in cyanobacteria Photosynth. Res. 2008, 98 (1-3) 529-539
-
(2008)
Photosynth. Res.
, vol.98
, Issue.1-3
, pp. 529-539
-
-
Allakhverdiev, S.I.1
Murata, N.2
-
104
-
-
0033996023
-
Inactivation of photosystems i and II in response to osmotic stress in Synechococcus. Contribution of water channels
-
Allakhverdiev, S. I.; Sakamoto, A.; Nishiyama, Y.; Murata, N. Inactivation of photosystems I and II in response to osmotic stress in Synechococcus. Contribution of water channels Plant Physiol. 2000, 122 (4) 1201-1208
-
(2000)
Plant Physiol.
, vol.122
, Issue.4
, pp. 1201-1208
-
-
Allakhverdiev, S.I.1
Sakamoto, A.2
Nishiyama, Y.3
Murata, N.4
-
105
-
-
14644420868
-
Differential accumulation of Lhcb gene products in thylakoid membranes of Zea mays plants grown under contrasting light and temperature conditions
-
Caffarri, S.; Frigerio, S.; Olivieri, E.; Righetti, P. G.; Bassi, R. Differential accumulation of Lhcb gene products in thylakoid membranes of Zea mays plants grown under contrasting light and temperature conditions Proteomics 2005, 5 (3) 758-768
-
(2005)
Proteomics
, vol.5
, Issue.3
, pp. 758-768
-
-
Caffarri, S.1
Frigerio, S.2
Olivieri, E.3
Righetti, P.G.4
Bassi, R.5
-
106
-
-
78650973615
-
Understanding Oxidative Stress and Antioxidant Functions to Enhance Photosynthesis
-
Foyer, C. H.; Shigeoka, S. Understanding Oxidative Stress and Antioxidant Functions to Enhance Photosynthesis Plant Physiol. 2011, 155 (1) 93-100
-
(2011)
Plant Physiol.
, vol.155
, Issue.1
, pp. 93-100
-
-
Foyer, C.H.1
Shigeoka, S.2
-
107
-
-
33745933642
-
Metal homeostasis in cyanobacteria and chloroplasts. Balancing benefits and risks to the photosynthetic apparatus
-
Shcolnick, S.; Keren, N. Metal homeostasis in cyanobacteria and chloroplasts. Balancing benefits and risks to the photosynthetic apparatus Plant Physiol. 2006, 141 (3) 805-810
-
(2006)
Plant Physiol.
, vol.141
, Issue.3
, pp. 805-810
-
-
Shcolnick, S.1
Keren, N.2
-
108
-
-
0042565990
-
Expression and regulation of the crucial plant-like ferredoxin of cyanobacteria
-
Mazouni, K.; Domain, F.; Chauvat, F.; Cassier-Chauvat, C. Expression and regulation of the crucial plant-like ferredoxin of cyanobacteria Mol. Microbiol. 2003, 49 (4) 1019-1029
-
(2003)
Mol. Microbiol.
, vol.49
, Issue.4
, pp. 1019-1029
-
-
Mazouni, K.1
Domain, F.2
Chauvat, F.3
Cassier-Chauvat, C.4
-
109
-
-
79952999929
-
Cyanobacterial flavodoxin complements ferredoxin deficiency in knocked-down transgenic tobacco plants
-
Blanco, N. E.; Ceccoli, R. D.; Segretin, M. E.; Poli, H. O.; Voss, I.; Melzer, M.; Bravo-Almonacid, F. F.; Scheibe, R.; Hajirezaei, M. R.; Carrillo, N. Cyanobacterial flavodoxin complements ferredoxin deficiency in knocked-down transgenic tobacco plants Plant J. 2011, 65 (6) 922-935
-
(2011)
Plant J.
, vol.65
, Issue.6
, pp. 922-935
-
-
Blanco, N.E.1
Ceccoli, R.D.2
Segretin, M.E.3
Poli, H.O.4
Voss, I.5
Melzer, M.6
Bravo-Almonacid, F.F.7
Scheibe, R.8
Hajirezaei, M.R.9
Carrillo, N.10
-
110
-
-
0026634193
-
Phycocyanin alpha-subunit phycocyanobilin lyase
-
Fairchild, C. D.; Zhao, J.; Zhou, J.; Colson, S. E.; Bryant, D. A.; Glazer, A. N. Phycocyanin alpha-subunit phycocyanobilin lyase Proc. Natl. Acad. Sci. U.S.A. 1992, 89 (15) 7017-7021
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, Issue.15
, pp. 7017-7021
-
-
Fairchild, C.D.1
Zhao, J.2
Zhou, J.3
Colson, S.E.4
Bryant, D.A.5
Glazer, A.N.6
-
111
-
-
0032954433
-
A Polypeptide with Similarity to Phycocyanin α-Subunit Phycocyanobilin Lyase Involved in Degradation of Phycobilisomes
-
Dolganov, N.; Grossman, A. R. A Polypeptide with Similarity to Phycocyanin α-Subunit Phycocyanobilin Lyase Involved in Degradation of Phycobilisomes J. Bacteriol. 1999, 181 (2) 610-617
-
(1999)
J. Bacteriol.
, vol.181
, Issue.2
, pp. 610-617
-
-
Dolganov, N.1
Grossman, A.R.2
-
112
-
-
0030978491
-
A novel L-cysteine/cystine C-S-lyase directing [2Fe-2S] cluster formation of Synechocystis ferredoxin
-
Leibrecht, I.; Kessler, D. A novel L-cysteine/cystine C-S-lyase directing [2Fe-2S] cluster formation of Synechocystis ferredoxin J. Biol. Chem. 1997, 272 (16) 10442-10447
-
(1997)
J. Biol. Chem.
, vol.272
, Issue.16
, pp. 10442-10447
-
-
Leibrecht, I.1
Kessler, D.2
-
113
-
-
79651469425
-
Regulation of photosynthetic electron transport
-
Rochaix, J. D. Regulation of photosynthetic electron transport Biochim. Biophys. Acta 2011, 1807 (3) 375-383
-
(2011)
Biochim. Biophys. Acta
, vol.1807
, Issue.3
, pp. 375-383
-
-
Rochaix, J.D.1
-
114
-
-
16544381081
-
Gene expression profiling reflects physiological processes in salt acclimation of Synechocystis sp. strain PCC 6803
-
Marin, K.; Kanesaki, Y.; Los, D. A.; Murata, N.; Suzuki, I.; Hagemann, M. Gene expression profiling reflects physiological processes in salt acclimation of Synechocystis sp. strain PCC 6803 Plant Physiol. 2004, 136 (2) 3290-3300
-
(2004)
Plant Physiol.
, vol.136
, Issue.2
, pp. 3290-3300
-
-
Marin, K.1
Kanesaki, Y.2
Los, D.A.3
Murata, N.4
Suzuki, I.5
Hagemann, M.6
-
115
-
-
0037133331
-
Long-term microclimatic stress causes rapid adaptive radiation of kaiABC clock gene family in a cyanobacteriu m, Nostoc linckia, from Evolution Canyons i and II, Israel
-
Dvornyk, V.; Vinogradova, O.; Nevo, E. Long-term microclimatic stress causes rapid adaptive radiation of kaiABC clock gene family in a cyanobacteriu m, Nostoc linckia, from Evolution Canyons I and II, Israel Proc. Natl. Acad. Sci. U.S.A. 2002, 99 (4) 2082-2087
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, Issue.4
, pp. 2082-2087
-
-
Dvornyk, V.1
Vinogradova, O.2
Nevo, E.3
-
116
-
-
77955073512
-
Integr ative a nalysis of large scale expression pro files reveals cor e transcriptional response and coordination between multiple cellular processes in a cyanobacterium
-
Singh, A. K.; Elvitigala, T.; Cameron, J. C.; Ghosh, B. K.; Bhattacharyya-Pakrasi, M.; Pakrasi, H. B. Integr ative a nalysis of large scale expression pro files reveals cor e transcriptional response and coordination between multiple cellular processes in a cyanobacterium BMC Syst. Biol. 2010, 4, 105
-
(2010)
BMC Syst. Biol.
, vol.4
, pp. 105
-
-
Singh, A.K.1
Elvitigala, T.2
Cameron, J.C.3
Ghosh, B.K.4
Bhattacharyya-Pakrasi, M.5
Pakrasi, H.B.6
-
117
-
-
77955462279
-
Addressing accuracy and precision issues in iTRAQ quantitation
-
Karp, N. A.; Huber, W.; Sadowski, P. G.; Charles, P. D.; Hester, S. V.; Lilley, K. S. Addressing accuracy and precision issues in iTRAQ quantitation Mol. Cell Proteomics 2010, 9, 1885-97
-
(2010)
Mol. Cell Proteomics
, vol.9
, pp. 1885-1897
-
-
Karp, N.A.1
Huber, W.2
Sadowski, P.G.3
Charles, P.D.4
Hester, S.V.5
Lilley, K.S.6
-
118
-
-
80155124832
-
MS3 eliminates ratio distortion i n isobaric multiplexed quantitative proteomics
-
Ting, L.; Rad, R.; Gygi, S. P.; Haas, W. MS3 eliminates ratio distortion i n isobaric multiplexed quantitative proteomics Nat. Methods 2011, 8, 937-940
-
(2011)
Nat. Methods
, vol.8
, pp. 937-940
-
-
Ting, L.1
Rad, R.2
Gygi, S.P.3
Haas, W.4
|