-
1
-
-
79952284127
-
Hallmarks of cancer: The next generation
-
Hanahan D, Weinberg RA. Hallmarks of cancer: the next generation. Cell 2011;144:646-74.
-
(2011)
Cell
, vol.144
, pp. 646-674
-
-
Hanahan, D.1
Weinberg, R.A.2
-
2
-
-
84858604270
-
Metabolic reprogramming: A cancer hallmark even Warburg did not anticipate
-
Ward PS, Thompson CB. Metabolic reprogramming: a cancer hallmark even Warburg did not anticipate. Cancer Cell 2012;21:297-308.
-
(2012)
Cancer Cell
, vol.21
, pp. 297-308
-
-
Ward, P.S.1
Thompson, C.B.2
-
4
-
-
84867559423
-
Pyruvate kinase M2: Multiple faces for conferring bene fi ts on cancer cells
-
Tamada M, Suematsu M, Saya H. Pyruvate kinase M2: multiple faces for conferring bene fi ts on cancer cells. Clin Cancer Res 2012;18:5554-61.
-
(2012)
Clin Cancer Res
, vol.18
, pp. 5554-5561
-
-
Tamada, M.1
Suematsu, M.2
Saya, H.3
-
6
-
-
80054032526
-
Cancer: Why tumours eat tryptophan
-
Prendergast GC. Cancer: why tumours eat tryptophan. Nature 2011;478:192-4.
-
(2011)
Nature
, vol.478
, pp. 192-194
-
-
Prendergast, G.C.1
-
7
-
-
79956199030
-
Mitochondrial oxidative stress drives tumor progression and metastasis: Should we use antioxidants as a key component of cancer treatment and prevention?
-
Sotgia F, Martinez-Outschoorn U, Lisanti M. Mitochondrial oxidative stress drives tumor progression and metastasis: should we use antioxidants as a key component of cancer treatment and prevention? BMC Med 2011;9:62.
-
(2011)
BMC Med
, vol.9
, pp. 62
-
-
Sotgia, F.1
Martinez-Outschoorn, U.2
Lisanti, M.3
-
8
-
-
66249108601
-
Understanding the Warburg effect: The metabolic requirements of cell proliferation
-
Vander Heiden MG, Cantley LC, Thompson CB. Understanding the Warburg effect: the metabolic requirements of cell proliferation. Science 2009;324:1029-33.
-
(2009)
Science
, vol.324
, pp. 1029-1033
-
-
Vander Heiden, M.G.1
Cantley, L.C.2
Thompson, C.B.3
-
9
-
-
52649107626
-
Cancer cell metabolism: Warburg and beyond
-
Hsu PP, Sabatini DM. Cancer cell metabolism: Warburg and beyond. Cell 2008;134:703-7.
-
(2008)
Cell
, vol.134
, pp. 703-707
-
-
Hsu, P.P.1
Sabatini, D.M.2
-
10
-
-
84855987831
-
Reductive carboxylation supports growth in tumour cells with defective mitochondria
-
Mullen AR, Wheaton WW, Jin ES, Chen P-H, Sullivan LB, Cheng T, et al. Reductive carboxylation supports growth in tumour cells with defective mitochondria. Nature 2012;481:385-8.
-
(2012)
Nature
, vol.481
, pp. 385-388
-
-
Mullen, A.R.1
Wheaton, W.W.2
Jin, E.S.3
Chen, P.-H.4
Sullivan, L.B.5
Cheng, T.6
-
11
-
-
84856014884
-
Reductive glutamine metabolism by IDH1 mediates lipogenesis under hypoxia
-
Metallo CM, Gameiro PA, Bell EL, Mattaini KR, Yang J, Hiller K, et al. Reductive glutamine metabolism by IDH1 mediates lipogenesis under hypoxia. Nature 2011;481:380-4.
-
(2011)
Nature
, vol.481
, pp. 380-384
-
-
Metallo, C.M.1
Gameiro, P.A.2
Bell, E.L.3
Mattaini, K.R.4
Yang, J.5
Hiller, K.6
-
12
-
-
33746930794
-
Succinate dehydrogenase and fumarate hydratase: Linking mitochondrial dysfunction and cancer
-
DOI 10.1038/sj.onc.1209594, PII 1209594
-
King A, Selak MA, Gottlieb E. Succinate dehydrogenase and fumarate hydratase: linking mitochondrial dysfunction and cancer. Oncogene 2006;25:4675-82. (Pubitemid 44187617)
-
(2006)
Oncogene
, vol.25
, Issue.34
, pp. 4675-4682
-
-
King, A.1
Selak, M.A.2
Gottlieb, E.3
-
13
-
-
77956265489
-
IDH mutations in glioma and acute myeloid leukemia
-
Dang L, Jin S, Su SM. IDH mutations in glioma and acute myeloid leukemia. Trends Mol Med 2010;16:387-97.
-
(2010)
Trends Mol Med
, vol.16
, pp. 387-397
-
-
Dang, L.1
Jin, S.2
Su, S.M.3
-
14
-
-
84867562009
-
IDH1 and IDH2 mutations in tumorigenesis: Mechanistic insights and clinical perspectives
-
Yang H, Ye D, Guan KL, Xiong Y. IDH1 and IDH2 mutations in tumorigenesis: mechanistic insights and clinical perspectives. Clin Cancer Res 2012;18:5562-71.
-
(2012)
Clin Cancer Res
, vol.18
, pp. 5562-5571
-
-
Yang, H.1
Ye, D.2
Guan, K.L.3
Xiong, Y.4
-
15
-
-
80052242132
-
Targeting cancer metabolism: A therapeutic window opens
-
Vander Heiden MG. Targeting cancer metabolism: a therapeutic window opens. Nat Rev Drug Discov 2011;10:671-84.
-
(2011)
Nat Rev Drug Discov
, vol.10
, pp. 671-684
-
-
Vander Heiden, M.G.1
-
16
-
-
84867514301
-
Targeting hypoxia, HIF-1 and tumor glucose metabolismto improve radiotherapy efficacy
-
Meijer TWH, Kaanders JHAM, Span PN, Bussink J. Targeting hypoxia, HIF-1 and tumor glucose metabolismto improve radiotherapy efficacy. Clin Cancer Res 2012;18:5585-94.
-
(2012)
Clin Cancer Res
, vol.18
, pp. 5585-5594
-
-
Meijer, T.W.H.1
Kaanders, J.2
Span, P.N.3
Bussink, J.4
-
17
-
-
80052031934
-
Systems-biology approaches for predicting genomic evolution
-
Papp B, Notebaart RA, Pál C. Systems-biology approaches for predicting genomic evolution. Nat Rev Genet 2011;12:591-602.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 591-602
-
-
Papp, B.1
Notebaart, R.A.2
Pál, C.3
-
18
-
-
79960610255
-
Optimal regulatory strategies for metabolic pathways in Escherichia coli depending on protein costs
-
Wessely F, Bartl M, Guthke R, Li P, Schuster S, Kaleta C. Optimal regulatory strategies for metabolic pathways in Escherichia coli depending on protein costs. Mol Syst Biol 2011;7:515.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 515
-
-
Wessely, F.1
Bartl, M.2
Guthke, R.3
Li, P.4
Schuster, S.5
Kaleta, C.6
-
19
-
-
33644552113
-
Use of constraint-based modeling for the prediction and validation of antimicrobial targets
-
Trawick JD, Schilling CH. Use of constraint-based modeling for the prediction and validation of antimicrobial targets. Biochem Pharmacol 2006;71:1026-35.
-
(2006)
Biochem Pharmacol
, vol.71
, pp. 1026-1035
-
-
Trawick, J.D.1
Schilling, C.H.2
-
20
-
-
33748352373
-
Multiple knockout analysis of genetic robustness in the yeast metabolic network
-
DOI 10.1038/ng1856, PII NG1856
-
Deutscher D, Meilijson I, Kupiec M, Ruppin E. Multiple knockout analysis of genetic robustness in the yeast metabolic network. Nat Genet 2006;38:993-8. (Pubitemid 44334827)
-
(2006)
Nature Genetics
, vol.38
, Issue.9
, pp. 993-998
-
-
Deutscher, D.1
Meilijson, I.2
Kupiec, M.3
Ruppin, E.4
-
21
-
-
0242487787
-
OptKnock: A Bilevel Programming Framework for Identifying Gene Knockout Strategies for Microbial Strain Optimization
-
DOI 10.1002/bit.10803
-
Burgard AP, Pharkya P, Maranas CD. Optknock: a bilevel programming framework for identifying gene knockout strategies for microbial strain optimization. Biotechnol Bioeng 2003;84:647-57. (Pubitemid 37420336)
-
(2003)
Biotechnology and Bioengineering
, vol.84
, Issue.6
, pp. 647-657
-
-
Burgard, A.P.1
Pharkya, P.2
Maranas, C.D.3
-
22
-
-
79959621970
-
Predicting selective drug targets in cancer through metabolic networks
-
Folger O, Jerby L, Frezza C, Gottlieb E, Ruppin E, Shlomi T. Predicting selective drug targets in cancer through metabolic networks. Mol Syst Biol 2011;7:501.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 501
-
-
Folger, O.1
Jerby, L.2
Frezza, C.3
Gottlieb, E.4
Ruppin, E.5
Shlomi, T.6
-
23
-
-
33846910173
-
Global reconstruction of the human metabolic network based on genomic and bibliomic data
-
DOI 10.1073/pnas.0610772104
-
Duarte NC, Becker SA, Jamshidi N, Thiele I, Mo ML, Vo TD, et al. Global reconstruction of the human metabolic network based on genomic and bibliomic data. Proc Natl Acad Sci U S A 2007;104:1777-82. (Pubitemid 46239855)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.6
, pp. 1777-1782
-
-
Duarte, N.C.1
Becker, S.A.2
Jamshidi, N.3
Thiele, I.4
Mo, M.L.5
Vo, T.D.6
Srivas, R.7
Palsson, B.O.8
-
24
-
-
66249132328
-
Predicting metabolic biomarkers of human inborn errors of metabolism
-
Shlomi T, Cabili MN, Ruppin E. Predicting metabolic biomarkers of human inborn errors of metabolism. Mol Syst Biol 2009;5:263.
-
(2009)
Mol Syst Biol
, vol.5
, pp. 263
-
-
Shlomi, T.1
Cabili, M.N.2
Ruppin, E.3
-
25
-
-
77956417789
-
Computational reconstruction of tissue-specific metabolic models: Application to human liver metabolism
-
Jerby L, Shlomi T, Ruppin E. Computational reconstruction of tissue-specific metabolic models: application to human liver metabolism. Mol Syst Biol 2010;6:401.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 401
-
-
Jerby, L.1
Shlomi, T.2
Ruppin, E.3
-
26
-
-
80053922625
-
Metabolic flux and the regulation of mammalian cell growth
-
Locasale Jason W, Cantley Lewis C. Metabolic flux and the regulation of mammalian cell growth. Cell Metab 2011;14:443-51.
-
(2011)
Cell Metab
, vol.14
, pp. 443-451
-
-
Locasale Jason, W.1
Cantley Lewis, C.2
-
27
-
-
0001736256
-
Metabolic control mechanisms. VII.A detailed computer model of the glycolytic pathway in ascites cells
-
Garfinkel D, Hess B. Metabolic control mechanisms. VII.A detailed computer model of the glycolytic pathway in ascites cells. J Biol Chem 1964;239:971-83.
-
(1964)
J Biol Chem
, vol.239
, pp. 971-983
-
-
Garfinkel, D.1
Hess, B.2
-
28
-
-
0025687613
-
A comprehensive model of human erythrocyte metabolism: Extensions to include pH effects
-
Lee I-D, Palsson BO. A comprehensive model of human erythrocyte metabolism: extensions to include pH effects. Biomed Biochim Acta 1991;49:771-89.
-
(1991)
Biomed Biochim Acta
, vol.49
, pp. 771-789
-
-
Lee, I.-D.1
Palsson, B.O.2
-
29
-
-
77957264975
-
Systems biology from micro-organisms to human metabolic diseases: The role of detailed kinetic models
-
Bakker B, van Eunen K, Jeneson JA, van Riel NA, Bruggeman FJ, Teusink B. Systems biology from micro-organisms to human metabolic diseases: the role of detailed kinetic models. Biochem Soc Trans 2010;38:1294-301.
-
(2010)
Biochem Soc Trans
, vol.38
, pp. 1294-1301
-
-
Bakker, B.1
Van Eunen, K.2
Jeneson, J.A.3
Van Riel, N.A.4
Bruggeman, F.J.5
Teusink, B.6
-
30
-
-
0028108519
-
Metabolic flux balancing: Basic concepts, scientific and practical use
-
Varma A, Palsson BO. Metabolic flux balancing: basic concepts, scientific and practical use. Nature Biotechnol 1994;12:994-8.
-
(1994)
Nature Biotechnol
, vol.12
, pp. 994-998
-
-
Varma, A.1
Palsson, B.O.2
-
31
-
-
77954197778
-
Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model
-
Yizhak K, Benyamini T, Liebermeister W, Ruppin E, Shlomi T. Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model. Bioinformatics 2010;26:i255-60.
-
(2010)
Bioinformatics
, vol.26
-
-
Yizhak, K.1
Benyamini, T.2
Liebermeister, W.3
Ruppin, E.4
Shlomi, T.5
-
32
-
-
51349092391
-
Network-based prediction of human tissue-specific metabolism
-
Shlomi T, Cabili MN, Herrgard MJ, Palsson BO, Ruppin E. Network-based prediction of human tissue-specific metabolism. Nat Biotechnol 2008;26:1003-10.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1003-1010
-
-
Shlomi, T.1
Cabili, M.N.2
Herrgard, M.J.3
Palsson, B.O.4
Ruppin, E.5
-
33
-
-
84867527044
-
Metabolic associations of reduced proliferation and oxidative stress in advanced breast cancer
-
Sep 17. [Epub ahead of print].
-
Jerby L, Wolf L, Denkert C, Stein GY, Hilvo M, Oresic M, et al. Metabolic associations of reduced proliferation and oxidative stress in advanced breast cancer. Cancer Res 2012 Sep 17. [Epub ahead of print].
-
(2012)
Cancer Res
-
-
Jerby, L.1
Wolf, L.2
Denkert, C.3
Stein, G.Y.4
Hilvo, M.5
Oresic, M.6
-
34
-
-
84858439602
-
Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods
-
Lewis NE, Nagarajan H, Palsson BO. Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods. Nat Rev Microbiol 2012;10:291-305.
-
(2012)
Nat Rev Microbiol
, vol.10
, pp. 291-305
-
-
Lewis, N.E.1
Nagarajan, H.2
Palsson, B.O.3
-
35
-
-
77956649528
-
Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks
-
Ruppin E, Papin JA, de Figueiredo LF, Schuster S. Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks. Curr Opin Biotechnol 2010;21:502-10.
-
(2010)
Curr Opin Biotechnol
, vol.21
, pp. 502-510
-
-
Ruppin, E.1
Papin, J.A.2
De Figueiredo, L.F.3
Schuster, S.4
-
36
-
-
84855929956
-
Using the reconstructed genome-scale human metabolic network to study physiology and pathology
-
Bordbar A, Palsson BO. Using the reconstructed genome-scale human metabolic network to study physiology and pathology. J Intern Med 2012;271:131-41.
-
(2012)
J Intern Med
, vol.271
, pp. 131-141
-
-
Bordbar, A.1
Palsson, B.O.2
-
38
-
-
84863662483
-
Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INIT
-
Agren R, Bordel S, Mardinoglu A, Pornputtapong N, Nookaew I, Nielsen J. Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INIT. PLoS Comput Biol 2012;8:e1002518.
-
(2012)
PLoS Comput Biol
, vol.8
-
-
Agren, R.1
Bordel, S.2
Mardinoglu, A.3
Pornputtapong, N.4
Nookaew, I.5
Nielsen, J.6
-
39
-
-
44949225040
-
Context-specific metabolic networks are consistent with experiments
-
Becker SA, Palsson BO. Context-specific metabolic networks are consistent with experiments. PLoS Comput Biol 2008;4:e1000082.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Becker, S.A.1
Palsson, B.O.2
-
40
-
-
70049110173
-
Interpreting expression data with metabolic flux models: Predicting Mycobacterium tuberculosis mycolic acid production
-
Colijn C, Brandes A, Zucker J, Lun DS, Weiner B, Farhat MR, et al. Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production. PLoS Comput Biol 2009;5:e1000489.
-
(2009)
PLoS Comput Biol
, vol.5
-
-
Colijn, C.1
Brandes, A.2
Zucker, J.3
Lun, D.S.4
Weiner, B.5
Farhat, M.R.6
-
41
-
-
79951536020
-
Functional integration of a metabolic network model and expression data without arbitrary thresholding
-
Jensen PA, Papin JA. Functional integration of a metabolic network model and expression data without arbitrary thresholding. Bioinformatics 2011;27:541-7.
-
(2011)
Bioinformatics
, vol.27
, pp. 541-547
-
-
Jensen, P.A.1
Papin, J.A.2
-
44
-
-
1642457253
-
The effects of alternate optimal solutions in constraint-based genome-scale metabolic models
-
DOI 10.1016/j.ymben.2003.09.002
-
Mahadevan R, Schilling CH. The effects of alternate optimal solutions in constraint-based genome-scale metabolic models. Metab Eng 2003;5:264-76. (Pubitemid 38122488)
-
(2003)
Metabolic Engineering
, vol.5
, Issue.4
, pp. 264-276
-
-
Mahadevan, R.1
Schilling, C.H.2
-
45
-
-
65549092780
-
Use of randomized sampling for analysis of metabolic networks
-
Schellenberger J, Palsson BØ. Use of randomized sampling for analysis of metabolic networks. J Biol Chem 2009;284:5457-61.
-
(2009)
J Biol Chem
, vol.284
, pp. 5457-5461
-
-
Schellenberger, J.1
Palsson, B.Ø.2
-
46
-
-
78049255973
-
Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis
-
Chandrasekaran S, Price ND. Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis. Proc Natl Acad Sci U S A 2010;107:17845-50.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 17845-17850
-
-
Chandrasekaran, S.1
Price, N.D.2
-
47
-
-
77952883945
-
Systems biology of microbial metabolism
-
Heinemann M, Sauer U. Systems biology of microbial metabolism. Curr Opin Microbiol 2010;13:337-43.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 337-343
-
-
Heinemann, M.1
Sauer, U.2
-
48
-
-
0035997009
-
Extreme pathway analysis of human red blood cell metabolism
-
Wiback SJ, Palsson BO. Extreme pathway analysis of human red blood cell metabolism. Biophys J 2002;83:808-18. (Pubitemid 34803618)
-
(2002)
Biophysical Journal
, vol.83
, Issue.2
, pp. 808-818
-
-
Wiback, S.J.1
Palsson, B.O.2
-
49
-
-
4544288672
-
Reconstruction and functional characterization of the human mitochondrial metabolic network based on proteomic and biochemical data
-
DOI 10.1074/jbc.M403782200
-
Vo TD, Greenberg HJ, Palsson BO. Reconstruction and functional characterization of the human mitochondrial metabolic network based on proteomic and biochemical data. J Biol Chem 2004;279:39532-40. (Pubitemid 39258220)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.38
, pp. 39532-39540
-
-
Vo, T.D.1
Greenberg, H.J.2
Palsson, B.O.3
-
50
-
-
0141573235
-
Metabolic flux analysis as a tool for the elucidation of the metabolism of neurotransmitter glutamate
-
DOI 10.1016/S1096-7176(03)00029-6
-
Chatziioannou A, Palaiologos G, Kolisis FN. Metabolic flux analysis as a tool for the elucidation of the metabolism of neurotransmitter glutamate. Metab Eng 2003;5:201-10. (Pubitemid 37124119)
-
(2003)
Metabolic Engineering
, vol.5
, Issue.3
, pp. 201-210
-
-
Chatziioannou, A.1
Palaiologos, G.2
Kolisis, F.N.3
-
51
-
-
34548860112
-
The Edinburgh human metabolic network reconstruction and its functional analysis
-
Ma H, Sorokin A, Mazein A, Selkov A, Selkov E, Demin O, et al. The Edinburgh human metabolic network reconstruction and its functional analysis. Mol Syst Biol 2007;3:135.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 135
-
-
Ma, H.1
Sorokin, A.2
Mazein, A.3
Selkov, A.4
Selkov, E.5
Demin, O.6
-
52
-
-
14844326483
-
Computational prediction of human metabolic pathways from the complete human genome
-
Romero P, Wagg J, Green M, Kaiser D, Krummenacker M, Karp P. Computational prediction of human metabolic pathways from the complete human genome. Genome Biol 2004;6:R2.
-
(2004)
Genome Biol
, vol.6
-
-
Romero, P.1
Wagg, J.2
Green, M.3
Kaiser, D.4
Krummenacker, M.5
Karp, P.6
-
53
-
-
38549126643
-
KEGG for linking genomes to life and the environment
-
DOI 10.1093/nar/gkm882
-
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, et al. KEGG for linking genomes to life and the environment. Nucleic Acids Res 2008;36 Suppl 1:D480-4. (Pubitemid 351149770)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Kanehisa, M.1
Araki, M.2
Goto, S.3
Hattori, M.4
Hirakawa, M.5
Itoh, M.6
Katayama, T.7
Kawashima, S.8
Okuda, S.9
Tokimatsu, T.10
Yamanishi, Y.11
-
54
-
-
77952674482
-
Metabolic network topology reveals transcriptional regulatory signatures of type 2 diabetes
-
Zelezniak A, Pers TH, Soares So, Patti ME, Patil KR. Metabolic network topology reveals transcriptional regulatory signatures of type 2 diabetes. PLoS Comput Biol 2010;6:e1000729.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Zelezniak, A.1
Pers, T.H.2
Soares, S.3
Patti, M.E.4
Patil, K.R.5
-
55
-
-
77956407882
-
HepatoNet1: A comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology
-
Gille C, Bolling C, Hoppe A, Bulik S, Hoffmann S, Hubner K, et al. HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology. Mol Syst Biol 2010;6:411.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 411
-
-
Gille, C.1
Bolling, C.2
Hoppe, A.3
Bulik, S.4
Hoffmann, S.5
Hubner, K.6
-
56
-
-
78049445175
-
Drug off-target effects predicted using structural analysis in the context of a metabolic network model
-
Chang RL, Xie L, Xie L, Bourne PE, Palsson BØ. Drug off-target effects predicted using structural analysis in the context of a metabolic network model. PLoS Comput Biol 2010;6:e1000938.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Chang, R.L.1
Xie, L.2
Xie, L.3
Bourne, P.E.4
Palsson, B.Ø.5
-
57
-
-
78650002545
-
Large-scale in silico modeling of metabolic interactions between cell types in the human brain
-
Lewis NE, Schramm G, Bordbar A, Schellenberger J, Andersen MP, Cheng JK, et al. Large-scale in silico modeling of metabolic interactions between cell types in the human brain. Nat Biotechnol 2010;28:1279-85.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 1279-1285
-
-
Lewis, N.E.1
Schramm, G.2
Bordbar, A.3
Schellenberger, J.4
Andersen, M.P.5
Cheng, J.K.6
-
58
-
-
77958537509
-
Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
-
Bordbar A, Lewis NE, Schellenberger J, Palsson BO, Jamshidi N. Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions. Mol Syst Biol 2010;6:422.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 422
-
-
Bordbar, A.1
Lewis, N.E.2
Schellenberger, J.3
Palsson, B.O.4
Jamshidi, N.5
-
59
-
-
80054969621
-
A multi-tissue type genome-scale metabolic network for analysis of whole-body systems physiology
-
Bordbar A, Feist A, Usaite-Black R, Woodcock J, Palsson B, Famili I. A multi-tissue type genome-scale metabolic network for analysis of whole-body systems physiology. BMC Syst Biol 2011;5:180.
-
(2011)
BMC Syst Biol
, vol.5
, pp. 180
-
-
Bordbar, A.1
Feist, A.2
Usaite-Black, R.3
Woodcock, J.4
Palsson, B.5
Famili, I.6
-
60
-
-
80052580351
-
Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydratase
-
Frezza C, Zheng L, Folger O, Rajagopalan KN, MacKenzie ED, Jerby L, et al. Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydratase. Nature 2011;477:225-8.
-
(2011)
Nature
, vol.477
, pp. 225-228
-
-
Frezza, C.1
Zheng, L.2
Folger, O.3
Rajagopalan, K.N.4
MacKenzie, E.D.5
Jerby, L.6
-
61
-
-
77957859044
-
Modeling core metabolism in cancer cells: Surveying the topology underlying the Warburg effect
-
Resendis-Antonio O, Checa A, Encarnación S. Modeling core metabolism in cancer cells: surveying the topology underlying the Warburg effect. PLoS One 2010;5:e12383.
-
(2010)
PLoS One
, vol.5
-
-
Resendis-Antonio, O.1
Checa, A.2
Encarnación, S.3
-
62
-
-
77951803596
-
Catabolic efficiency of aerobic glycolysis: The Warburg effect revisited
-
Vazquez A, Liu J, Zhou Y, Oltvai Z. Catabolic efficiency of aerobic glycolysis: the Warburg effect revisited. BMC Syst Biol 2010;4:58.
-
(2010)
BMC Syst Biol
, vol.4
, pp. 58
-
-
Vazquez, A.1
Liu, J.2
Zhou, Y.3
Oltvai, Z.4
-
63
-
-
79953661070
-
Genome-scale metabolic modeling elucidates the role of proliferative adaptation in causing the Warburg effect
-
Shlomi T, Benyamini T, Gottlieb E, Sharan R, Ruppin E. Genome-scale metabolic modeling elucidates the role of proliferative adaptation in causing the Warburg effect. PLoS Comput Biol 2011;7:e1002018.
-
(2011)
PLoS Comput Biol
, vol.7
-
-
Shlomi, T.1
Benyamini, T.2
Gottlieb, E.3
Sharan, R.4
Ruppin, E.5
-
64
-
-
84863230581
-
Metabolic network modeling and simulation for drug targeting and discovery
-
Kim HU, Sohn SB, Lee SY. Metabolic network modeling and simulation for drug targeting and discovery. Biotechnol J 2012;7:330-42.
-
(2012)
Biotechnol J
, vol.7
, pp. 330-342
-
-
Kim, H.U.1
Sohn, S.B.2
Lee, S.Y.3
-
65
-
-
0030667434
-
Integrating genetic approaches into the discovery of anticancer drugs
-
DOI 10.1126/science.278.5340.1064
-
Hartwell LH, Szankasi P, Roberts CJ, Murray AW, Friend SH. Integrating genetic approaches into the discovery of anticancer drugs. Science 1997;278:1064-8. (Pubitemid 27517876)
-
(1997)
Science
, vol.278
, Issue.5340
, pp. 1064-1068
-
-
Hartwell, L.H.1
Szankasi, P.2
Roberts, C.J.3
Murray, A.W.4
Friend, S.H.5
-
66
-
-
0035830860
-
Principles for the buffering of genetic variation
-
Hartman JL, Garvik B, Hartwell L. Principles for the buffering of genetic variation. Science 2001;291:1001-4.
-
(2001)
Science
, vol.291
, pp. 1001-1004
-
-
Hartman, J.L.1
Garvik, B.2
Hartwell, L.3
-
67
-
-
25444497278
-
The concept of synthetic lethality in the context of anticancer therapy
-
Kaelin WG. The concept of synthetic lethality in the context of anticancer therapy. Nat Rev Cancer 2005;5:689-98.
-
(2005)
Nat Rev Cancer
, vol.5
, pp. 689-698
-
-
Kaelin, W.G.1
-
68
-
-
70449529855
-
Induction of autophagy by spermidine promotes longevity
-
Eisenberg T, Knauer H, Schauer A, Buttner S, Ruckenstuhl C, Carmona-Gutierrez D, et al. Induction of autophagy by spermidine promotes longevity. Nat Cell Biol 2009;11:1305-14.
-
(2009)
Nat Cell Biol
, vol.11
, pp. 1305-1314
-
-
Eisenberg, T.1
Knauer, H.2
Schauer, A.3
Buttner, S.4
Ruckenstuhl, C.5
Carmona-Gutierrez, D.6
-
69
-
-
0034722890
-
Farnesyltransferase and geranylgeranyltransferase I inhibitors and cancer therapy: Lessons from mechanism and bench-to-bedside translational studies
-
DOI 10.1038/sj.onc.1204146
-
Sebti SM, Hamilton AD. Farnesyltransferase and geranylgeranyl-transferase I inhibitors and cancer therapy: lessons from mechanism and bench-to-bedside translational studies. Oncogene 2000;19:6584-93. (Pubitemid 32197696)
-
(2000)
Oncogene
, vol.19
, Issue.56
, pp. 6584-6593
-
-
Sebti, S.M.1
Hamilton, A.D.2
-
70
-
-
83855165727
-
Cyclooxygenases and lipoxygenases in cancer
-
Schneider C, Pozzi A. Cyclooxygenases and lipoxygenases in cancer. Cancer Metastasis Rev 2011;30:277-94.
-
(2011)
Cancer Metastasis Rev
, vol.30
, pp. 277-294
-
-
Schneider, C.1
Pozzi, A.2
-
71
-
-
0141761500
-
Thirty years of polyamine-related approaches to cancer therapy. Retrospect and prospect. Part 2. Structural analogues and derivatives
-
DOI 10.2174/1389450033490876
-
Seiler N. Thirty years of polyamine-related approaches to cancer therapy. Retrospect and prospect. Part 2. Structural analogues and derivatives. Curr Drug Targets 2003;4:565-85. (Pubitemid 37139050)
-
(2003)
Current Drug Targets
, vol.4
, Issue.7
, pp. 565-585
-
-
Seiler, N.1
-
72
-
-
81255161124
-
Geranylgeranyl diphosphate depletion inhibits breast cancer cell migration
-
Dudakovic A, Tong H, Hohl R. Geranylgeranyl diphosphate depletion inhibits breast cancer cell migration. Invest New Drugs 2011;29:912-20.
-
(2011)
Invest New Drugs
, vol.29
, pp. 912-920
-
-
Dudakovic, A.1
Tong, H.2
Hohl, R.3
-
73
-
-
67649232608
-
Altered expression of 15-hydroxyprostaglandin dehydrogenase in tumor-infiltrated CD11b myeloid cells: A mechanism for immune evasion in cancer
-
Eruslanov E, Kaliberov S, Daurkin I, Kaliberova L, Buchsbaum D, Vieweg J, et al. Altered expression of 15-hydroxyprostaglandin dehydrogenase in tumor-infiltrated CD11b myeloid cells: a mechanism for immune evasion in cancer. J Immunol 2009;182:7548-57.
-
(2009)
J Immunol
, vol.182
, pp. 7548-7557
-
-
Eruslanov, E.1
Kaliberov, S.2
Daurkin, I.3
Kaliberova, L.4
Buchsbaum, D.5
Vieweg, J.6
-
74
-
-
77957556494
-
Predicting enzymetargets for cancer drugs by profiling human Metabolic reactions in NCI-60 cell lines
-
Li L, Zhou X, Ching W-K, Wang P. Predicting enzymetargets for cancer drugs by profiling human Metabolic reactions in NCI-60 cell lines.BMC Bioinformatics 2010;11:501.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 501
-
-
Li, L.1
Zhou, X.2
Ching, W.-K.3
Wang, P.4
-
75
-
-
79952601264
-
Metabolomics and surgical oncology: Potential role for small molecule biomarkers
-
Davis VW, Bathe OF, Schiller DE, Slupsky CM, Sawyer MB. Metabolomics and surgical oncology: potential role for small molecule biomarkers. J Surg Oncol 2011;103:451-9.
-
(2011)
J Surg Oncol
, vol.103
, pp. 451-459
-
-
Davis, V.W.1
Bathe, O.F.2
Schiller, D.E.3
Slupsky, C.M.4
Sawyer, M.B.5
-
77
-
-
0036848748
-
11C]choline as a potential PET marker for imaging of breast cancer athymic mice
-
DOI 10.1016/S0969-8051(02)00339-6, PII S0969805102003396
-
Zheng Q-H, Stone KL, Mock BH, Miller KD, Fei X, Liu X, et al. [11C]choline as a potential PET marker for imaging of breast cancer athymic mice. Nucl Med Biol 2002;29:803-7. (Pubitemid 35346900)
-
(2002)
Nuclear Medicine and Biology
, vol.29
, Issue.8
, pp. 803-807
-
-
Zheng, Q.-H.1
Stone, K.L.2
Mock, B.H.3
Miller, K.D.4
Fei, X.5
Liu, X.6
Wang, J.-Q.7
Glick-Wilson, B.E.8
Sledge, G.W.9
Hutchins, G.D.10
-
78
-
-
51749113592
-
Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli
-
Covert MW, Xiao N, Chen TJ, Karr JR. Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli. Bioinformatics 2008;24:2044-50.
-
(2008)
Bioinformatics
, vol.24
, pp. 2044-2050
-
-
Covert, M.W.1
Xiao, N.2
Chen, T.J.3
Karr, J.R.4
-
79
-
-
44949247269
-
Dynamic analysis of integrated signaling, metabolic, and regulatory networks
-
Min Lee J, Gianchandani EP, Eddy JA, Papin JA. Dynamic analysis of integrated signaling, metabolic, and regulatory networks. PLoS Comput Biol 2008;4:e1000086.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Min Lee, J.1
Gianchandani, E.P.2
Eddy, J.A.3
Papin, J.A.4
-
80
-
-
34247612307
-
Multiple high-throughput analyses monitor the response of E. coli to perturbations
-
DOI 10.1126/science.1132067
-
Ishii N, Nakahigashi K, Baba T, Robert M, Soga T, Kanai A, et al. Multiple high-throughput analyses monitor the response of E. coli to perturbations. Science 2007;316:593-7. (Pubitemid 46683144)
-
(2007)
Science
, vol.316
, Issue.5824
, pp. 593-597
-
-
Ishii, N.1
Nakahigashi, K.2
Baba, T.3
Robert, M.4
Soga, T.5
Kanai, A.6
Hirasawa, T.7
Naba, M.8
Hirai, K.9
Hoque, A.10
Ho, P.Y.11
Kakazu, Y.12
Sugawara, K.13
Igarashi, S.14
Harada, S.15
Masuda, T.16
Sugiyama, N.17
Togashi, T.18
Hasegawa, M.19
Takai, Y.20
Yugi, K.21
Arakawa, K.22
Iwata, N.23
Toya, Y.24
Nakayama, Y.25
Nishioka, T.26
Shimizu, K.27
Mori, H.28
Tomita, M.29
more..
-
82
-
-
79961215490
-
Targeting GLUT1 and the Warburg effect in renal cell carcinoma by chemical synthetic lethality
-
Chan DA, Sutphin PD, Nguyen P, Turcotte S, Lai EW, Banh A, et al. Targeting GLUT1 and the Warburg effect in renal cell carcinoma by chemical synthetic lethality. Sci Transl Med 2011;3:94ra70.
-
(2011)
Sci Transl Med
, vol.3
-
-
Chan, D.A.1
Sutphin, P.D.2
Nguyen, P.3
Turcotte, S.4
Lai, E.W.5
Banh, A.6
|