-
2
-
-
0033806243
-
Intercalative binding of small molecules to nucleic acids
-
D.E. Graves, and L.M. Velea Intercalative binding of small molecules to nucleic acids Curr. Org. Chem. 4 2000 915 929
-
(2000)
Curr. Org. Chem.
, vol.4
, pp. 915-929
-
-
Graves, D.E.1
Velea, L.M.2
-
3
-
-
77953126483
-
Selective binding of small molecules to DNA: Application and perspectives
-
B. Wang, J. Tan, and L. Zhu Selective binding of small molecules to DNA: application and perspectives Colloids Surf. B 79 2010 1 4
-
(2010)
Colloids Surf. B
, vol.79
, pp. 1-4
-
-
Wang, B.1
Tan, J.2
Zhu, L.3
-
4
-
-
34548451133
-
Noncovalent interaction with DNA: An overview
-
L. Strekowski, and B. Wilson Noncovalent interaction with DNA: an overview Mut. Res. 623 2007 3 13
-
(2007)
Mut. Res.
, vol.623
, pp. 3-13
-
-
Strekowski, L.1
Wilson, B.2
-
6
-
-
0342987251
-
Design of peptides that bind in the minor groove of DNA at 5′-(A, T)5G(A, T)C(A, T) sequences by a dimeric side-by-side motif
-
W.S. Wade, M. Mrksich, and P.B. Dervan Design of peptides that bind in the minor groove of DNA at 5′-(A, T)5G(A, T)C(A, T) sequences by a dimeric side-by-side motif J. Am. Chem. Soc. 114 1992 8783 8794
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 8783-8794
-
-
Wade, W.S.1
Mrksich, M.2
Dervan, P.B.3
-
7
-
-
0029662190
-
Effects of the A·T/T·A degeneracy of pyrrole-imidazole polyamide recognition in the minor groove of DNA
-
S. White, E.E. Baird, and P.B. Dervan Effects of the A·T/ T·A degeneracy of pyrrole-imidazole polyamide recognition in the minor groove of DNA Biochemistry 35 1992 12532 12537
-
(1992)
Biochemistry
, vol.35
, pp. 12532-12537
-
-
White, S.1
Baird, E.E.2
Dervan, P.B.3
-
8
-
-
0034830898
-
Molecular recognition of DNA by small molecules
-
P.B. Dervan Molecular recognition of DNA by small molecules Bioorg. Med. Chem. 9 2001 2215 2235
-
(2001)
Bioorg. Med. Chem.
, vol.9
, pp. 2215-2235
-
-
Dervan, P.B.1
-
9
-
-
0344641913
-
Sequence-specific DNA recognition by polyamides
-
P.B. Dervan, and R.W. Burli Sequence-specific DNA recognition by polyamides Curr. Opin. Chem. Biol. 3 1999 688 693
-
(1999)
Curr. Opin. Chem. Biol.
, vol.3
, pp. 688-693
-
-
Dervan, P.B.1
Burli, R.W.2
-
10
-
-
47649108181
-
Synthesis, biological evaluation, and molecular modeling studies of rebeccamycin analogues modified in the carbohydrate moiety
-
F. Animati, M. Berettoni, M. Bigioni, M. Binaschi, P. Felicetti, L. Gontrani, O. Incani, A. Madami, E. Monteagudo, L. Olivieri, S. Resta, C. Rossi, and A. Cipollone Synthesis, biological evaluation, and molecular modeling studies of rebeccamycin analogues modified in the carbohydrate moiety ChemMedChem 3 2008 266 279
-
(2008)
ChemMedChem
, vol.3
, pp. 266-279
-
-
Animati, F.1
Berettoni, M.2
Bigioni, M.3
Binaschi, M.4
Felicetti, P.5
Gontrani, L.6
Incani, O.7
Madami, A.8
Monteagudo, E.9
Olivieri, L.10
Resta, S.11
Rossi, C.12
Cipollone, A.13
-
11
-
-
67849133724
-
Identification and cleavage site analysis of DNA sequences bound strongly by bleomycin
-
Q. Ma, Y. Akiyama, Z. Xu, K. Konishi, and S.M. Hecht Identification and cleavage site analysis of DNA sequences bound strongly by bleomycin J. Am. Chem. Soc. 131 2009 2013 2022
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 2013-2022
-
-
Ma, Q.1
Akiyama, Y.2
Xu, Z.3
Konishi, K.4
Hecht, S.M.5
-
12
-
-
33646015109
-
Major groove recognition of DNA by carbohydrates
-
B. Willis, and D.P. Arya Major groove recognition of DNA by carbohydrates Curr. Org. Chem. 10 2006 663 673
-
(2006)
Curr. Org. Chem.
, vol.10
, pp. 663-673
-
-
Willis, B.1
Arya, D.P.2
-
13
-
-
77951023778
-
Calorimetric and spectroscopic studies of aminoglycoside binding to AT-rich DNA triple helices
-
H. Xi, S. Kumar, L. Dosen-Micovic, and D.P. Arya Calorimetric and spectroscopic studies of aminoglycoside binding to AT-rich DNA triple helices Biochimie 92 2010 514 529
-
(2010)
Biochimie
, vol.92
, pp. 514-529
-
-
Xi, H.1
Kumar, S.2
Dosen-Micovic, L.3
Arya, D.P.4
-
14
-
-
80055014243
-
Thermodynamics of nucleic acid "shape readout" by an aminosugar
-
H. Xi, E. Davis, N. Ranjan, L. Xue, D. Hyde-Volpe, and D.P. Arya Thermodynamics of nucleic acid "shape readout" by an aminosugar Biochemistry 50 2011 9088 9113
-
(2011)
Biochemistry
, vol.50
, pp. 9088-9113
-
-
Xi, H.1
Davis, E.2
Ranjan, N.3
Xue, L.4
Hyde-Volpe, D.5
Arya, D.P.6
-
15
-
-
79960914931
-
Recognition of HIV TAR RNA by triazole linked neomycin dimers
-
S. Kumar, and D.P. Arya Recognition of HIV TAR RNA by triazole linked neomycin dimers Bioorg. Med. Chem. Lett. 21 2011 4788 4792
-
(2011)
Bioorg. Med. Chem. Lett.
, vol.21
, pp. 4788-4792
-
-
Kumar, S.1
Arya, D.P.2
-
16
-
-
79955927721
-
Neomycin-neomycin dimer: An all-carbohydrate scaffold with high affinity for AT-rich DNA duplexes
-
S. Kumar, L. Xue, and D.P. Arya Neomycin-neomycin dimer: an all-carbohydrate scaffold with high affinity for AT-rich DNA duplexes J. Am. Chem. Soc. 133 2011 7361 7375
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 7361-7375
-
-
Kumar, S.1
Xue, L.2
Arya, D.P.3
-
17
-
-
0041932005
-
Aminoglycoside (neomycin) preference is for A-form nucleic acids, not just RNA: Results from a competition dialysis study
-
D.P. Arya, L. Xue, and B. Willis Aminoglycoside (neomycin) preference is for A-form nucleic acids, not just RNA: results from a competition dialysis study J. Am. Chem. Soc. 125 2003 10148 10149
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 10148-10149
-
-
Arya, D.P.1
Xue, L.2
Willis, B.3
-
18
-
-
0034782523
-
Intercalators as anticancer drug
-
M.F. Brana, M. Cacho, A. Gradillas, B. de Pascual-Teresa, and A. Ramos Intercalators as anticancer drug Curr. Pharm. Des. 7 2001 1745 1780
-
(2001)
Curr. Pharm. Des.
, vol.7
, pp. 1745-1780
-
-
Brana, M.F.1
Cacho, M.2
Gradillas, A.3
De Pascual-Teresa, B.4
Ramos, A.5
-
19
-
-
0035177432
-
Acridine - A neglected antibacterial chromophore
-
M. Wainwright Acridine - a neglected antibacterial chromophore J. Antimicrob. Chemother. 47 2001 1 13
-
(2001)
J. Antimicrob. Chemother.
, vol.47
, pp. 1-13
-
-
Wainwright, M.1
-
20
-
-
0037784000
-
Design, synthesis, and biological properties of new bis(acridine-4- carboxamides) as anticancer agents
-
I. Antonini, P. Polucci, A. Magnano, B. Gatto, M. Palumbo, E. Menta, N. Pescalli, and S. Martelli Design, synthesis, and biological properties of new bis(acridine-4-carboxamides) as anticancer agents J. Med. Chem. 46 2003 3109 3115
-
(2003)
J. Med. Chem.
, vol.46
, pp. 3109-3115
-
-
Antonini, I.1
Polucci, P.2
Magnano, A.3
Gatto, B.4
Palumbo, M.5
Menta, E.6
Pescalli, N.7
Martelli, S.8
-
21
-
-
0025768698
-
The genetic toxicology of acridines
-
L.R. Ferguson, and W.A. Denny The genetic toxicology of acridines Mut. Res. 258 1991 123 160
-
(1991)
Mut. Res.
, vol.258
, pp. 123-160
-
-
Ferguson, L.R.1
Denny, W.A.2
-
22
-
-
0036024720
-
Acridine derivatives as chemotherapeutic agents
-
W. Denny Acridine derivatives as chemotherapeutic agents Curr. Med. Chem. 9 2002 1655 1665
-
(2002)
Curr. Med. Chem.
, vol.9
, pp. 1655-1665
-
-
Denny, W.1
-
23
-
-
33745185876
-
Intercalation of organic dye molecules into double-stranded DNA-general principles and recent developments
-
H. Ihmels, and D. Otto Intercalation of organic dye molecules into double-stranded DNA-general principles and recent developments Top. Curr. Chem. 258 2005 161 204
-
(2005)
Top. Curr. Chem.
, vol.258
, pp. 161-204
-
-
Ihmels, H.1
Otto, D.2
-
26
-
-
79958250079
-
Acridine derivatives as anti-BVDV agents
-
M. Tonelli, G. Vettoretti, B. Tasso, F. Novelli, V. Boido, F. Sparatore, B. Busonera, A. Ouhtit, P. Farci, S. Blois, G. Giliberti, and P. La Colla Acridine derivatives as anti-BVDV agents Antivir. Res. 91 2011 133 141
-
(2011)
Antivir. Res.
, vol.91
, pp. 133-141
-
-
Tonelli, M.1
Vettoretti, G.2
Tasso, B.3
Novelli, F.4
Boido, V.5
Sparatore, F.6
Busonera, B.7
Ouhtit, A.8
Farci, P.9
Blois, S.10
Giliberti, G.11
La Colla, P.12
-
27
-
-
0033003394
-
Natural guanidine derivatives
-
R.G. Berlinck Natural guanidine derivatives Nat. Prod. Rep. 16 1999 339 365
-
(1999)
Nat. Prod. Rep.
, vol.16
, pp. 339-365
-
-
Berlinck, R.G.1
-
28
-
-
78649273681
-
The chemistry and biology of organic guanidine derivatives
-
R.G. Berlinck, A.C. Burtoloso, A.E. Trindade-Silva, S. Romminger, R.P. Morais, K. Bandeira, and C.M. Mizuno The chemistry and biology of organic guanidine derivatives Nat. Prod. Rep. 27 2010 1871 1907
-
(2010)
Nat. Prod. Rep.
, vol.27
, pp. 1871-1907
-
-
Berlinck, R.G.1
Burtoloso, A.C.2
Trindade-Silva, A.E.3
Romminger, S.4
Morais, R.P.5
Bandeira, K.6
Mizuno, C.M.7
-
29
-
-
0034400884
-
The guanidine metabolites of Ptilocaulis spiculifer and related compounds; Isolation and synthesis
-
L. Heys, C.G. Moore, and P.J. Murphy The guanidine metabolites of Ptilocaulis spiculifer and related compounds; isolation and synthesis Chem. Soc. Rev. 29 2000 57 67
-
(2000)
Chem. Soc. Rev.
, vol.29
, pp. 57-67
-
-
Heys, L.1
Moore, C.G.2
Murphy, P.J.3
-
30
-
-
0000419336
-
Synthesis and chemistry of guanidine derivatives
-
S. Patai, Z. Rappoport, John Wiley & Sons Chichester, U.K
-
Y. Yamamoto, and S. Kojima Synthesis and chemistry of guanidine derivatives S. Patai, Z. Rappoport, The Chemistry of Amidines and Imidates 1991 John Wiley & Sons Chichester, U.K 485 526
-
(1991)
The Chemistry of Amidines and Imidates
, pp. 485-526
-
-
Yamamoto, Y.1
Kojima, S.2
-
31
-
-
0034709386
-
A practical entry to the crambescidin family of guanidine alkaloids. Enantioselective total syntheses of ptilomycalin A, crambescidin 657 and its methyl ester (neofolitispates 2) and crambescidin 800
-
D.S. Coffey, A.I. McDonald, L.E. Overman, M.H. Rabinowitz, and P.A. Renhowe A practical entry to the crambescidin family of guanidine alkaloids. Enantioselective total syntheses of ptilomycalin A, crambescidin 657 and its methyl ester (neofolitispates 2) and crambescidin 800 J. Am. Chem. Soc. 122 2000 4893 4903
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 4893-4903
-
-
Coffey, D.S.1
McDonald, A.I.2
Overman, L.E.3
Rabinowitz, M.H.4
Renhowe, P.A.5
-
32
-
-
0030027851
-
Crystallographic evidence for the proposed host behavior of ptilomycalin A
-
P.J. Murphy, H.L. Williams, D.E. Hibbs, M.B. Hursthouse, and K.M.A. Malik Crystallographic evidence for the proposed host behavior of ptilomycalin A J. Chem. Soc. Chem. Commun. 1996 445 447
-
(1996)
J. Chem. Soc. Chem. Commun.
, pp. 445-447
-
-
Murphy, P.J.1
Williams, H.L.2
Hibbs, D.E.3
Hursthouse, M.B.4
Malik, K.M.A.5
-
33
-
-
70349763292
-
Biological activities of guanidine compounds
-
F. Saczewski, and L. Balewski Biological activities of guanidine compounds Exp. Opin. Ther. Patents 10 2009 1417 1448
-
(2009)
Exp. Opin. Ther. Patents
, vol.10
, pp. 1417-1448
-
-
Saczewski, F.1
Balewski, L.2
-
34
-
-
79952189620
-
Cytotoxic 3,6-bis((imidazolidinone)imino)acridines: Synthesis, DNA binding and molecular modeling
-
L. Janovec, M. Kozurkova, D. Sabolova, J. Ungvarsky, H. Paulikova, J. Plsikova, Z. Vantova, and J. Imrich Cytotoxic 3,6-bis((imidazolidinone)imino) acridines: synthesis, DNA binding and molecular modeling Bioorg. Med. Chem. 19 2011 1790 1801
-
(2011)
Bioorg. Med. Chem.
, vol.19
, pp. 1790-1801
-
-
Janovec, L.1
Kozurkova, M.2
Sabolova, D.3
Ungvarsky, J.4
Paulikova, H.5
Plsikova, J.6
Vantova, Z.7
Imrich, J.8
-
35
-
-
0034605221
-
Solid-phase of acridine-based threading intercalator peptides
-
C.B. Carlson, and P.A. Beal Solid-phase of acridine-based threading intercalator peptides Bioorg. Med. Chem. Lett. 10 2000 1979 1982
-
(2000)
Bioorg. Med. Chem. Lett.
, vol.10
, pp. 1979-1982
-
-
Carlson, C.B.1
Beal, P.A.2
-
36
-
-
0037038323
-
Effect of spermine conjugation on the cytotoxicity and cellular transport of acridine
-
J.G. Delcros, S. Tomasi, S. Carrington, B. Martin, J. Renault, I.S. Blagbrough, and P. Uriac Effect of spermine conjugation on the cytotoxicity and cellular transport of acridine J. Med. Chem. 45 2002 5098 5111
-
(2002)
J. Med. Chem.
, vol.45
, pp. 5098-5111
-
-
Delcros, J.G.1
Tomasi, S.2
Carrington, S.3
Martin, B.4
Renault, J.5
Blagbrough, I.S.6
Uriac, P.7
-
38
-
-
11844291970
-
The search of DNA-intercalators as antitumoral drugs: What it worked and what did not work
-
R. Martinez, and L. Chacon-Garcia The search of DNA-intercalators as antitumoral drugs: what it worked and what did not work Curr. Med. Chem. 12 2005 127 151
-
(2005)
Curr. Med. Chem.
, vol.12
, pp. 127-151
-
-
Martinez, R.1
Chacon-Garcia, L.2
-
39
-
-
0038620773
-
DNA binding studies and site selective fluorescence sensitization of an anthryl probe
-
C.V. Kumar, and E.H. Asuncion DNA binding studies and site selective fluorescence sensitization of an anthryl probe J. Am. Chem. Soc. 115 1993 8547 8553
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 8547-8553
-
-
Kumar, C.V.1
Asuncion, E.H.2
-
40
-
-
0031304271
-
Optical absorbance and fluorescence techniques for measuring DNA-drug interactions
-
K.R. Fox, Human Press Totowa, New Jersey
-
T.C. Jenkins Optical absorbance and fluorescence techniques for measuring DNA-drug interactions K.R. Fox, Drug-DNA Interaction Protocols 1997 Human Press Totowa, New Jersey 195 218
-
(1997)
Drug-DNA Interaction Protocols
, pp. 195-218
-
-
Jenkins, T.C.1
-
41
-
-
0016175370
-
Theoretical aspects of DNA-protein interactions: Co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice
-
J.D. McGhee, and P.H. von Hippel Theoretical aspects of DNA-protein interactions: co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice J. Mol. Biol. 86 1974 469 489
-
(1974)
J. Mol. Biol.
, vol.86
, pp. 469-489
-
-
McGhee, J.D.1
Von Hippel, P.H.2
-
42
-
-
79651471870
-
-
Technical University in Košice Košice
-
J. Busa Octave 2006 Technical University in Košice Košice
-
(2006)
Octave
-
-
Busa, J.1
-
43
-
-
33846404114
-
Synthesis, DNA interaction, and cytotoxic activity of a novel proflavine-dithiazolidinone pharmacophore
-
L. Janovec, D. Sabolova, M. Kozurkova, H. Paulikova, P. Kristian, J. Ungvarsky, E. Moravcikova, M. Bajdichova, D. Podhradsky, and J. Imrich Synthesis, DNA interaction, and cytotoxic activity of a novel proflavine-dithiazolidinone pharmacophore Bioconjug. Chem. 18 2007 93 100
-
(2007)
Bioconjug. Chem.
, vol.18
, pp. 93-100
-
-
Janovec, L.1
Sabolova, D.2
Kozurkova, M.3
Paulikova, H.4
Kristian, P.5
Ungvarsky, J.6
Moravcikova, E.7
Bajdichova, M.8
Podhradsky, D.9
Imrich, J.10
-
44
-
-
33846513983
-
Stability and structural features of DNA intercalation with ethidium bromide, acridine orange and methylene blue
-
S. Nafisi, A.A. Saboury, N. Keramat, J.-F. Neault, and H.-A. Tajmir-Riahi Stability and structural features of DNA intercalation with ethidium bromide, acridine orange and methylene blue J. Mol. Struct. 827 2007 35 43
-
(2007)
J. Mol. Struct.
, vol.827
, pp. 35-43
-
-
Nafisi, S.1
Saboury, A.A.2
Keramat, N.3
Neault, J.-F.4
Tajmir-Riahi, H.-A.5
-
45
-
-
18844447286
-
Study on the interaction of new water-soluble porphyrin with DNA
-
J. Kang, H. Wu, X. Lu, Y. Wang, and L. Zhou Study on the interaction of new water-soluble porphyrin with DNA Spectrochim. Acta A 61 2005 2041 2047
-
(2005)
Spectrochim. Acta A
, vol.61
, pp. 2041-2047
-
-
Kang, J.1
Wu, H.2
Lu, X.3
Wang, Y.4
Zhou, L.5
-
46
-
-
34548271002
-
DNA binding properties and evaluation of cytotoxic activity of 9,10-bis-N-substituted (aminomethyl)anthracenes
-
M. Kozurkova, D. Sabolova, H. Paulikova, L. Janovec, P. Kristian, M. Bajdichova, J. Busa, D. Podhradsky, and J. Imrich DNA binding properties and evaluation of cytotoxic activity of 9,10-bis-N-substituted (aminomethyl) anthracenes Int. J. Biol. Macromol. 41 2007 415 422
-
(2007)
Int. J. Biol. Macromol.
, vol.41
, pp. 415-422
-
-
Kozurkova, M.1
Sabolova, D.2
Paulikova, H.3
Janovec, L.4
Kristian, P.5
Bajdichova, M.6
Busa, J.7
Podhradsky, D.8
Imrich, J.9
-
48
-
-
0032171498
-
Spectroscopic studies of 9-hydroxyellipticine binding to DNA
-
M.A. Ismail, K.J. Sanders, G.C. Fennell, H.C. Latham, P. Wormell, and A. Rodger Spectroscopic studies of 9-hydroxyellipticine binding to DNA Biopolymers 46 1998 127 143
-
(1998)
Biopolymers
, vol.46
, pp. 127-143
-
-
Ismail, M.A.1
Sanders, K.J.2
Fennell, G.C.3
Latham, H.C.4
Wormell, P.5
Rodger, A.6
-
49
-
-
23944453324
-
Synthesis, DNA affinity and protozoal activity of fused ring dicationic compounds and their prodrugs
-
R.K. Arafa, R. Brun, T. Wenzler, F.A. Tanious, W.D. Wilson, C.E. Stephens, and D.W. Boykin Synthesis, DNA affinity and protozoal activity of fused ring dicationic compounds and their prodrugs J. Med. Chem. 48 2005 5480 5488
-
(2005)
J. Med. Chem.
, vol.48
, pp. 5480-5488
-
-
Arafa, R.K.1
Brun, R.2
Wenzler, T.3
Tanious, F.A.4
Wilson, W.D.5
Stephens, C.E.6
Boykin, D.W.7
-
50
-
-
33746405155
-
Looking at long molecules in solution: What happens when they are subjected to Couette flow
-
A. Rodger, R. Marington, M.A. Geeves, M. Hicks, L. de Alwis, D.J. Halsall, and T.R. Dafforn Looking at long molecules in solution: what happens when they are subjected to Couette flow Phys. Chem. Chem. Phys. 8 2006 3161 3171
-
(2006)
Phys. Chem. Chem. Phys.
, vol.8
, pp. 3161-3171
-
-
Rodger, A.1
Marington, R.2
Geeves, M.A.3
Hicks, M.4
De Alwis, L.5
Halsall, D.J.6
Dafforn, T.R.7
-
51
-
-
33749575024
-
Metal iondirected cooperative DNA binding of small molecules
-
T. Ihara, T. Ikegami, T. Fujii, Y. Kitamura, S. Sueda, M. Takagi, and A. Jyo Metal iondirected cooperative DNA binding of small molecules J. Inorg. Biochem. 100 2006 1744 1754
-
(2006)
J. Inorg. Biochem.
, vol.100
, pp. 1744-1754
-
-
Ihara, T.1
Ikegami, T.2
Fujii, T.3
Kitamura, Y.4
Sueda, S.5
Takagi, M.6
Jyo, A.7
-
52
-
-
12044256590
-
Base inclinations in natural and synthetic DNAs
-
P.-J. Chou, and W.C. Johnson Base inclinations in natural and synthetic DNAs J. Am. Chem. Soc. 115 1993 1205 1214
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 1205-1214
-
-
Chou, P.-J.1
Johnson, W.C.2
-
53
-
-
0029026601
-
Criteria for the mode of binding of DNA binding agents
-
D. Suh, and J.B. Chaires Criteria for the mode of binding of DNA binding agents Bioorg. Med. Chem. 3 1995 723 728
-
(1995)
Bioorg. Med. Chem.
, vol.3
, pp. 723-728
-
-
Suh, D.1
Chaires, J.B.2
-
54
-
-
77955417849
-
Thermodynamic and structural study of pyrene-1-carboxaldehyde/DNA interactions by molecular spectroscopy: Probing intercalation and binding properties
-
E. Grueso, and R. Prado-Gotor Thermodynamic and structural study of pyrene-1-carboxaldehyde/DNA interactions by molecular spectroscopy: probing intercalation and binding properties Chem. Phys. 373 2010 186 192
-
(2010)
Chem. Phys.
, vol.373
, pp. 186-192
-
-
Grueso, E.1
Prado-Gotor, R.2
-
55
-
-
0035724690
-
DNA topoisomerases as targets for anticancer drugs
-
Z. Topcu DNA topoisomerases as targets for anticancer drugs J. Clin. Pharm. Ther. 26 2001 405 416
-
(2001)
J. Clin. Pharm. Ther.
, vol.26
, pp. 405-416
-
-
Topcu, Z.1
-
56
-
-
33749658088
-
Topoisomerase enzymes as therapeutic targets for cancer chemotherapy
-
G.I. Giles, and R.P. Sharma Topoisomerase enzymes as therapeutic targets for cancer chemotherapy Med. Chem. 1 2005 383 394
-
(2005)
Med. Chem.
, vol.1
, pp. 383-394
-
-
Giles, G.I.1
Sharma, R.P.2
-
57
-
-
33749034730
-
Topoisomerase i inhibitors: Camptothecins and beyond
-
Y. Pommier Topoisomerase I inhibitors: camptothecins and beyond Nat. Rev. Cancer 6 2006 789 802
-
(2006)
Nat. Rev. Cancer
, vol.6
, pp. 789-802
-
-
Pommier, Y.1
-
58
-
-
34249018852
-
Synthesis, DNA binding, and Leishmania topoisomerase inhibition activities of a novel series of anthra[1,2-d]imidazole-6,11-dione derivatives
-
P. Chaudhuri, H.K. Majumder, and S. Battacharya Synthesis, DNA binding, and Leishmania topoisomerase inhibition activities of a novel series of anthra[1,2-d]imidazole-6,11-dione derivatives J. Med. Chem. 50 2007 2536 2540
-
(2007)
J. Med. Chem.
, vol.50
, pp. 2536-2540
-
-
Chaudhuri, P.1
Majumder, H.K.2
Battacharya, S.3
-
59
-
-
84961983597
-
An experimental and computational analysis on the differential role of the positional isomers of symmetric bis-2-(pyridyl)-1H-benzimidazoles as DNA binding agents
-
P. Chaudhuri, B. Ganguly, and S. Battacharya An experimental and computational analysis on the differential role of the positional isomers of symmetric bis-2-(pyridyl)-1H-benzimidazoles as DNA binding agents J. Org. Chem. 72 2007 1912 1923
-
(2007)
J. Org. Chem.
, vol.72
, pp. 1912-1923
-
-
Chaudhuri, P.1
Ganguly, B.2
Battacharya, S.3
-
60
-
-
22744457037
-
Human DNA topoisomerase I: Relaxation, roles, and damage control
-
J.B. Leppard, and J.J. Champoux Human DNA topoisomerase I: relaxation, roles, and damage control Chromosoma 114 2005 75 85
-
(2005)
Chromosoma
, vol.114
, pp. 75-85
-
-
Leppard, J.B.1
Champoux, J.J.2
-
62
-
-
34548391416
-
DNA topoisomerase II, genotoxicity, and cancer
-
A.K. McClendon, and N. Osheroff DNA topoisomerase II, genotoxicity, and cancer Mutat. Res. 623 2007 83 97
-
(2007)
Mutat. Res.
, vol.623
, pp. 83-97
-
-
McClendon, A.K.1
Osheroff, N.2
-
63
-
-
0032189683
-
Mechanism of action of eukaryotic DNA topoisomerase i and drugs targeted to the enzyme
-
Y. Pommier, P. Pourquier, Y. Fan, and D. Strumberg Mechanism of action of eukaryotic DNA topoisomerase I and drugs targeted to the enzyme Biochim. Biophys. Acta 1400 1998 83 105
-
(1998)
Biochim. Biophys. Acta
, vol.1400
, pp. 83-105
-
-
Pommier, Y.1
Pourquier, P.2
Fan, Y.3
Strumberg, D.4
-
64
-
-
56049085650
-
Diazoniapolycyclic ions inhibit the activity of topoisomerase i and the growth of certain tumor cell lines
-
S. Basili, G. Basso, A. Faccio, A. Granzhan, H. Ihmels, S. Moro, and G. Viola Diazoniapolycyclic ions inhibit the activity of topoisomerase I and the growth of certain tumor cell lines ChemMedChem 3 2008 1671 1676
-
(2008)
ChemMedChem
, vol.3
, pp. 1671-1676
-
-
Basili, S.1
Basso, G.2
Faccio, A.3
Granzhan, A.4
Ihmels, H.5
Moro, S.6
Viola, G.7
-
65
-
-
79958120468
-
GADD45[alpha] and annexin A1 are involved in the apoptosis of HL-60 induced by resveratrol
-
G. Li, S. He, L. Chang, H. Lu, H. Zhang, H. Zhang, and J. Chiu GADD45[alpha] and annexin A1 are involved in the apoptosis of HL-60 induced by resveratrol Phytomedicine 18 2011 704 709
-
(2011)
Phytomedicine
, vol.18
, pp. 704-709
-
-
Li, G.1
He, S.2
Chang, L.3
Lu, H.4
Zhang, H.5
Zhang, H.6
Chiu, J.7
-
66
-
-
3142708522
-
Investigations on DNA intercalation and surface binding by SYBR green I, its structure determination and methodological implications
-
H. Zipper, H. Brunner, J. Bernhagen, and F. Vitzthum Investigations on DNA intercalation and surface binding by SYBR green I, its structure determination and methodological implications Nucleic Acids Res. 32 2004 e103
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 103
-
-
Zipper, H.1
Brunner, H.2
Bernhagen, J.3
Vitzthum, F.4
-
67
-
-
84871437039
-
-
http://www.chemaxon.com.
-
-
-
-
68
-
-
84871435653
-
-
http://gabedit.sourceforge.net.
-
-
-
-
69
-
-
84893169025
-
-
M.W. Schmidt, K.K. Baldridge, J.A. Boatz, S.T. Elbert, M.S. Gordon, J.H. Jensen, S. Koseki, N. Matsunaga, K.A. Nguyen, S.J. Su, T.L. Windus, M. Dupuis, and J.A. Montgomery J. Comput. Chem. 14 1993 1347
-
(1993)
J. Comput. Chem.
, vol.14
, pp. 1347
-
-
Schmidt, M.W.1
Baldridge, K.K.2
Boatz, J.A.3
Elbert, S.T.4
Gordon, M.S.5
Jensen, J.H.6
Koseki, S.7
Matsunaga, N.8
Nguyen, K.A.9
Su, S.J.10
Windus, T.L.11
Dupuis, M.12
Montgomery, J.A.13
-
70
-
-
33947716119
-
A semi-empirical free energy force field with charge-based desolvation
-
R. Huey, G.M. Morris, A.J. Olson, and D.S. Goodsell A semi-empirical free energy force field with charge-based desolvation J. Comput. Chem. 28 2007 1145 1152
-
(2007)
J. Comput. Chem.
, vol.28
, pp. 1145-1152
-
-
Huey, R.1
Morris, G.M.2
Olson, A.J.3
Goodsell, D.S.4
-
71
-
-
11644261806
-
Automated docking using a lamarckian genetic algorithm and empirical binding free energy function
-
G.M. Morris, D.S. Goodsell, R.S. Halliday, R. Huey, W.E. Hart, R.K. Belew, and A.J. Olson Automated docking using a lamarckian genetic algorithm and empirical binding free energy function J. Comput. Chem. 19 1998 1639 1662
-
(1998)
J. Comput. Chem.
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
-
72
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
W.L. Jorgensen, J. Chandrasekhar, J.D. Madura, R.W. Impey, and M.L. Klein Comparison of simple potential functions for simulating liquid water J. Chem. Phys. 79 1983 926 935
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
73
-
-
0033397980
-
Python: A programming language for software integration and development
-
M.F. Sanner Python: a programming language for software integration and development J. Mol. Graph. Model. 17 1999 57 61
-
(1999)
J. Mol. Graph. Model.
, vol.17
, pp. 57-61
-
-
Sanner, M.F.1
-
74
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
J.C. Phillips, R. Braun, W. Wang, J. Gumbart, E. Tajkhorshid, E. Villa, C. Chipot, R.D. Skeel, L. Kale, and K. Schulten Scalable molecular dynamics with NAMD J. Comput. Chem. 26 2005 1781 1802
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
75
-
-
0001398008
-
How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules?
-
J. Wang, W. Wang, P.A. Kollman, and D.A. Case How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules? J. Comput. Chem. 21 2000 1049 1074
-
(2000)
J. Comput. Chem.
, vol.21
, pp. 1049-1074
-
-
Wang, J.1
Wang, W.2
Kollman, P.A.3
Case, D.A.4
-
76
-
-
2942532422
-
Development and testing of a general amber force field
-
J. Wang, R.M. Wolf, J.W. Caldwell, P.A. Kollman, and D.A. Case Development and testing of a general amber force field J. Comput. Chem. 25 2004 1157 1174
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1157-1174
-
-
Wang, J.1
Wolf, R.M.2
Caldwell, J.W.3
Kollman, P.A.4
Case, D.A.5
-
78
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
E.F. Pettersen, T.D. Goddard, C.C. Huang, G.S. Couch, D.M. Greenblatt, E.C. Meng, and T.E. Ferrin UCSF Chimera-a visualization system for exploratory research and analysis J. Comput. Chem. 25 2004 1605 1612
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
79
-
-
0037075120
-
DNA cross-linking by azinomycin B: Monte Carlo simulations in the evaluation of sequence selectivity
-
S. Alcaro, F. Ortuso, and R.S. Coleman DNA cross-linking by azinomycin B: Monte Carlo simulations in the evaluation of sequence selectivity J. Med. Chem. 45 2002 861 870
-
(2002)
J. Med. Chem.
, vol.45
, pp. 861-870
-
-
Alcaro, S.1
Ortuso, F.2
Coleman, R.S.3
|